| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|51989474|gb|AAU21243.1| |
score: 434 |
e-value: 7e-120 |
Identity: 78.87% |
Span: 795bp (97.4%) |
Frame: 1 |
| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] |
| Match: gi|225457089|ref|XP_002280099.1| |
score: 412 |
e-value: 2e-113 |
Identity: 73.58% |
Span: 795bp (97.4%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270226328|emb|CBI15062.1| unnamed protein product [Vitis vinifera] |
| Match: gi|255540733|ref|XP_002511431.1| |
score: 404 |
e-value: 5e-111 |
Identity: 72.08% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-dependent RNA polymerase, putative [Ricinus communis] >gi223550546|gb|EEF52033.1| RNA-dependent RNA polymerase, p... |
| Match: gi|224133496|ref|XP_002321582.1| |
score: 401 |
e-value: 4e-110 |
Identity: 70.94% |
Span: 795bp (97.4%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222868578|gb|EEF05709.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|15237051|ref|NP_192851.1| |
score: 379 |
e-value: 3e-103 |
Identity: 66.41% |
Span: 786bp (96.3%) |
Frame: 1 |
| RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase [Arabidopsis thaliana] >gi3600048|gb|AAC35535.1| s... |
| Match: gi|125548642|gb|EAY94464.1| |
score: 360 |
e-value: 1e-97 |
Identity: 66.42% |
Span: 795bp (97.4%) |
Frame: 1 |
| hypothetical protein OsI_16234 [Oryza sativa Indica Group] |
| Match: gi|75327281|sp|Q7XM31.1|RDR2_ORYSJ |
score: 360 |
e-value: 1e-97 |
Identity: 66.42% |
Span: 795bp (97.4%) |
Frame: 1 |
| RecName: Full=Probable RNA-dependent RNA polymerase 2; Short=OsRDR2 >gi32492169|emb|CAE04828.1| OSJNBb0048E02.13 [Ory... |
| Match: gi|242073398|ref|XP_002446635.1| |
score: 350 |
e-value: 1e-94 |
Identity: 64.53% |
Span: 795bp (97.4%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor] >gi241937818|gb|EES10963.1| hypothetical protein SORBIDRA... |
| Match: gi|238015130|gb|ACR38600.1| |
score: 348 |
e-value: 4e-94 |
Identity: 64.15% |
Span: 795bp (97.4%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|89473792|gb|ABD72708.1| |
score: 348 |
e-value: 4e-94 |
Identity: 64.15% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Zea mays] |
| Match: gi|146762448|gb|ABQ45352.1| |
score: 275 |
e-value: 5e-72 |
Identity: 51.32% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|224111420|ref|XP_002315849.1| |
score: 272 |
e-value: 4e-71 |
Identity: 51.32% |
Span: 795bp (97.4%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222864889|gb|EEF02020.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|90823307|gb|ABE01124.1| |
score: 272 |
e-value: 4e-71 |
Identity: 50.94% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Gossypium hirsutum] |
| Match: gi|157152684|gb|ABV24845.1| |
score: 271 |
e-value: 5e-71 |
Identity: 51.33% |
Span: 783bp (96.0%) |
Frame: 1 |
| RNA-dependent RNA polymerase [Nicotiana glutinosa] >gi209420668|gb|ACI46982.1| RNA-dependent RNA polymerase [Nicotian... |
| Match: gi|40794967|gb|AAR91037.1| |
score: 271 |
e-value: 8e-71 |
Identity: 48.3% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare] |
| Match: gi|4138343|emb|CAA09896.1| |
score: 271 |
e-value: 8e-71 |
Identity: 51.71% |
Span: 783bp (96.0%) |
Frame: 1 |
| RNA-directed RNA polymerase [Petunia x hybrida] |
| Match: gi|197223664|gb|ACH53360.1| |
score: 269 |
e-value: 2e-70 |
Identity: 47.92% |
Span: 795bp (97.4%) |
Frame: 1 |
| RNA-directed RNA polymerase 1a [Hordeum vulgare] |
| Match: gi|224099569|ref|XP_002311535.1| |
score: 269 |
e-value: 3e-70 |
Identity: 50.57% |
Span: 795bp (97.4%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222851355|gb|EEE88902.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|225424397|ref|XP_002284914.1| |
score: 268 |
e-value: 4e-70 |
Identity: 49.43% |
Span: 789bp (96.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|4138282|emb|CAA09697.1| |
score: 268 |
e-value: 5e-70 |
Identity: 51.3% |
Span: 783bp (96.0%) |
Frame: 1 |
| RNA-directed RNA polymerase [Nicotiana tabacum] |
| Match: gi|4038592|emb|CAA71421.1| |
score: 268 |
e-value: 5e-70 |
Identity: 50.57% |
Span: 783bp (96.0%) |
Frame: 1 |
| RNA-directed RNA polymerase [Solanum lycopersicum] |
| Match: gi|224099571|ref|XP_002311536.1| |
score: 267 |
e-value: 9e-70 |
Identity: 48.5% |
Span: 795bp (97.4%) |
Frame: 1 |
| rna-dependent RNA polymerase [Populus trichocarpa] >gi222851356|gb|EEE88903.1| rna-dependent RNA polymerase [Populus ... |
| Match: gi|225424395|ref|XP_002281315.1| |
score: 266 |
e-value: 2e-69 |
Identity: 49.06% |
Span: 789bp (96.7%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147860348|emb|CAN82568.1| |
score: 266 |
e-value: 2e-69 |
Identity: 49.06% |
Span: 789bp (96.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|197223666|gb|ACH53361.1| |
score: 265 |
e-value: 3e-69 |
Identity: 47.91% |
Span: 789bp (96.7%) |
Frame: 1 |
| RNA-directed RNA polymerase 1b [Hordeum vulgare] |
|
| 210 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At4G11130.1 |
score: 379 |
e-value: 2e-105 |
Identity: 66.41% |
Span: 786bp (96.3%) |
Frame: 1 |
| Symbols: RDR2 | RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase | chr4:6780518-6784386 FORWARD |
| Match: At1G14790.1 |
score: 254 |
e-value: 4e-68 |
Identity: 48.11% |
Span: 792bp (97.1%) |
Frame: 1 |
| Symbols: ATRDRP1, RDR1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | ... |
| Match: At3G49500.1 |
score: 207 |
e-value: 8e-54 |
Identity: 44.36% |
Span: 774bp (94.9%) |
Frame: 1 |
| Symbols: SGS2, SDE1, RDR6 | RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding | chr3:18360178-18364190 REV... |
| Match: At2G19930.1 |
score: 75.1 |
e-value: 5e-14 |
Identity: 26.88% |
Span: 693bp (84.9%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8614615-8619523 REVERSE |
| Match: At2G19920.1 |
score: 72.8 |
e-value: 2e-13 |
Identity: 26.67% |
Span: 696bp (85.3%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8609304-8613969 REVERSE |
|
| swissprot [blastx] | Showing best 4 hits recorded |
| Match: Q7XM31 |
score: 360 |
e-value: 6e-99 |
Identity: 66.42% |
Span: 795bp (97.4%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1 |
| Match: Q0DXS3 |
score: 261 |
e-value: 5e-69 |
Identity: 48.48% |
Span: 792bp (97.1%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2 |
| Match: Q8LHH9 |
score: 226 |
e-value: 2e-58 |
Identity: 49.58% |
Span: 711bp (87.1%) |
Frame: 1 |
| Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1 |
| Match: O14227 |
score: 134 |
e-value: 1e-30 |
Identity: 34.77% |
Span: 723bp (88.6%) |
Frame: 1 |
| RNA-dependent RNA polymerase 1 OS=Schizosaccharomyces pombe GN=rdr1 PE=1 SV=1 |
|
