| genbank/nr [blastx] | Showing best 85 hits recorded |
| Match: gi|7673359|gb|AAF66825.1| |
score: 140 |
e-value: 1e-48 |
Identity: 92.31% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|106879567|emb|CAJ38367.1| |
score: 138 |
e-value: 1e-40 |
Identity: 90% |
Span: 234bp (29.1%) |
Frame: 1 |
| polyA-binding protein [Plantago major] |
| Match: gi|147773643|emb|CAN76464.1| |
score: 128 |
e-value: 6e-41 |
Identity: 86.08% |
Span: 231bp (28.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|157345168|emb|CAO71896.1| |
score: 125 |
e-value: 1e-38 |
Identity: 82.5% |
Span: 234bp (29.1%) |
Frame: 1 |
| unnamed |
| Match: gi|7673357|gb|AAF66824.1|AF190656_1 |
score: 124 |
e-value: 2e-35 |
Identity: 83.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|7673355|gb|AAF66823.1|AF190655_1 |
score: 124 |
e-value: 2e-35 |
Identity: 83.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|13560783|gb|AAK30205.1|AF349964_1 |
score: 123 |
e-value: 4e-40 |
Identity: 82.05% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Daucus carota] |
| Match: gi|115475838|ref|NP_001061515.1| |
score: 122 |
e-value: 4e-28 |
Identity: 78.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| Os08g0314800 [Oryza sativa (japonica cultivar-group)] >gi35215045|dbj|BAC92404.1| putative polyadenylate-binding prot... |
| Match: gi|125561055|gb|EAZ06503.1| |
score: 122 |
e-value: 4e-28 |
Identity: 78.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|83853808|gb|ABC47841.1| |
score: 122 |
e-value: 2e-26 |
Identity: 81.25% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding |
| Match: gi|34015127|gb|AAQ56324.1| |
score: 122 |
e-value: 4e-28 |
Identity: 78.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| putative poly(A)-binding protein [Oryza sativa Japonica Group] |
| Match: gi|147863287|emb|CAN82615.1| |
score: 121 |
e-value: 7e-26 |
Identity: 80% |
Span: 234bp (29.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|118486179|gb|ABK94932.1| |
score: 120 |
e-value: 4e-37 |
Identity: 84.42% |
Span: 228bp (28.3%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|115477976|ref|NP_001062583.1| |
score: 119 |
e-value: 5e-32 |
Identity: 79.01% |
Span: 234bp (29.1%) |
Frame: 1 |
| Os09g0115400 [Oryza sativa (japonica cultivar-group)] >gi46389987|dbj|BAD16229.1| putative poly(A)-binding protein [O... |
| Match: gi|157335547|emb|CAO61377.1| |
score: 119 |
e-value: 3e-25 |
Identity: 79.75% |
Span: 231bp (28.7%) |
Frame: 1 |
| unnamed |
| Match: gi|1737492|gb|AAB38974.1| |
score: 119 |
e-value: 7e-31 |
Identity: 78.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Triticum aestivum] |
| Match: gi|18402769|ref|NP_564554.1| |
score: 117 |
e-value: 5e-30 |
Identity: 79.75% |
Span: 231bp (28.7%) |
Frame: 1 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|7528270|gb|AAF63202.1|AF240679_1 |
score: 116 |
e-value: 1e-35 |
Identity: 79.75% |
Span: 234bp (29.1%) |
Frame: 1 |
| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|2213871|gb|AAB61594.1| |
score: 115 |
e-value: 9e-29 |
Identity: 73.81% |
Span: 228bp (28.3%) |
Frame: 1 |
| poly(A)-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|13430610|gb|AAK25927.1|AF360217_1 |
score: 114 |
e-value: 2e-25 |
Identity: 69.77% |
Span: 228bp (28.3%) |
Frame: 1 |
| putative |
| Match: gi|15227815|ref|NP_179916.1| |
score: 114 |
e-value: 2e-25 |
Identity: 69.77% |
Span: 228bp (28.3%) |
Frame: 1 |
| gi|15227815|ref|NP_179916.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|7439964|pir||T0... |
| Match: gi|62321231|dbj|BAD94406.1| |
score: 114 |
e-value: 2e-25 |
Identity: 69.77% |
Span: 228bp (28.3%) |
Frame: 1 |
| gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|70663933|emb|CAE02947.3| |
score: 112 |
e-value: 2e-29 |
Identity: 72.84% |
Span: 234bp (29.1%) |
Frame: 1 |
| OSJNBa0014K14.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|115459296|ref|NP_001053248.1| |
score: 112 |
e-value: 2e-29 |
Identity: 72.84% |
Span: 234bp (29.1%) |
Frame: 1 |
| Os04g0504800 [Oryza sativa (japonica cultivar-group)] >gi32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (jap... |
| Match: gi|83853826|gb|ABC47858.1| |
score: 112 |
e-value: 4e-23 |
Identity: 79.73% |
Span: 216bp (26.8%) |
Frame: 1 |
| poly(A)-binding |
| Match: gi|125548950|gb|EAY94772.1| |
score: 112 |
e-value: 2e-29 |
Identity: 72.84% |
Span: 234bp (29.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|125590923|gb|EAZ31273.1| |
score: 112 |
e-value: 2e-29 |
Identity: 72.84% |
Span: 234bp (29.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|147839912|emb|CAN65906.1| |
score: 109 |
e-value: 7e-32 |
Identity: 80% |
Span: 216bp (26.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|147770378|emb|CAN78155.1| |
score: 108 |
e-value: 3e-22 |
Identity: 83.1% |
Span: 207bp (25.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|168057049|ref|XP_001780529.1| |
score: 107 |
e-value: 1e-21 |
Identity: 71.05% |
Span: 225bp (28.0%) |
Frame: 1 |
| predicted |
| Match: gi|14029147|gb|AAK51123.1| |
score: 107 |
e-value: 1e-21 |
Identity: 71.08% |
Span: 234bp (29.1%) |
Frame: 1 |
| gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis] |
| Match: gi|168018575|ref|XP_001761821.1| |
score: 106 |
e-value: 2e-21 |
Identity: 71.05% |
Span: 225bp (28.0%) |
Frame: 1 |
| predicted |
| Match: gi|47026849|gb|AAT08650.1| |
score: 106 |
e-value: 2e-21 |
Identity: 72.15% |
Span: 225bp (28.0%) |
Frame: 1 |
| gi|47026849|gb|AAT08650.1| poly(A)-binding protein [Hyacinthus orientalis] |
| Match: gi|168036104|ref|XP_001770548.1| |
score: 105 |
e-value: 5e-21 |
Identity: 71.05% |
Span: 225bp (28.0%) |
Frame: 1 |
| predicted |
| Match: gi|168053933|ref|XP_001779388.1| |
score: 103 |
e-value: 1e-20 |
Identity: 69.33% |
Span: 222bp (27.6%) |
Frame: 1 |
| predicted |
| Match: gi|398327|emb|CAA81127.1| |
score: 102 |
e-value: 3e-20 |
Identity: 66.67% |
Span: 234bp (29.1%) |
Frame: 1 |
| gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis] |
| Match: gi|159164292|pdb|2DYD|A |
score: 101 |
e-value: 7e-20 |
Identity: 84.75% |
Span: 177bp (22.0%) |
Frame: 1 |
| Chain |
| Match: gi|157335550|emb|CAO61380.1| |
score: 100 |
e-value: 1e-19 |
Identity: 81.54% |
Span: 189bp (23.5%) |
Frame: 1 |
| unnamed |
| Match: gi|1171978|sp|P42731|PABP2_ARATH |
score: 99.4 |
e-value: 3e-19 |
Identity: 73.97% |
Span: 219bp (27.2%) |
Frame: 1 |
| Polyadenylate-binding |
| Match: gi|30689921|ref|NP_195137.2| |
score: 99.4 |
e-value: 3e-19 |
Identity: 73.97% |
Span: 219bp (27.2%) |
Frame: 1 |
| gi|30689921|ref|NP_195137.2| polyadenylate-binding protein 2 (PABP2) [Arabidopsis thaliana] |
| Match: gi|19347816|gb|AAL86321.1| |
score: 99.4 |
e-value: 3e-19 |
Identity: 73.97% |
Span: 219bp (27.2%) |
Frame: 1 |
| putative poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|62321453|dbj|BAD94856.1| |
score: 99.4 |
e-value: 3e-19 |
Identity: 73.97% |
Span: 219bp (27.2%) |
Frame: 1 |
| gi|62321453|dbj|BAD94856.1| poly(A)-binding protein [Arabidopsis thaliana] |
| Match: gi|157359366|emb|CAO67527.1| |
score: 95.9 |
e-value: 3e-18 |
Identity: 64.86% |
Span: 222bp (27.6%) |
Frame: 1 |
| unnamed |
| Match: gi|147785105|emb|CAN75447.1| |
score: 95.9 |
e-value: 3e-18 |
Identity: 64.86% |
Span: 222bp (27.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|157335548|emb|CAO61378.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 78.46% |
Span: 189bp (23.5%) |
Frame: 1 |
| unnamed |
| Match: gi|15217573|ref|NP_177322.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 61.33% |
Span: 225bp (28.0%) |
Frame: 1 |
| gi|15217573|ref|NP_177322.1| polyadenylate-binding protein 5 (PABP5) [Arabidopsis thaliana] gi|21542448|sp|Q05196|PAB... |
| Match: gi|166786|gb|AAA32832.1| |
score: 83.6 |
e-value: 2e-14 |
Identity: 60% |
Span: 225bp (28.0%) |
Frame: 1 |
| gi|166786|gb|AAA32832.1| poly(A)-binding protein |
| Match: gi|23197794|gb|AAN15424.1| |
score: 82.8 |
e-value: 3e-14 |
Identity: 69.64% |
Span: 168bp (20.9%) |
Frame: 1 |
| gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis thaliana] |
| Match: gi|3287682|gb|AAC25510.1|AAC25510 |
score: 82.8 |
e-value: 3e-14 |
Identity: 69.64% |
Span: 168bp (20.9%) |
Frame: 1 |
| Strong |
| Match: gi|9930616|gb|AAG02117.1|AF293840_1 |
score: 82.8 |
e-value: 3e-14 |
Identity: 69.64% |
Span: 168bp (20.9%) |
Frame: 1 |
| poly(A) |
| Match: gi|15219945|ref|NP_173690.1| |
score: 82.8 |
e-value: 3e-14 |
Identity: 69.64% |
Span: 168bp (20.9%) |
Frame: 1 |
| gi|15219945|ref|NP_173690.1| polyadenylate-binding protein 3 (PABP3) [Arabidopsis thaliana] gi|12643628|sp|O64380|PAB... |
| Match: gi|147770378|emb|CAN78155.1| |
score: 77.8 |
e-value: 8e-13 |
Identity: 77.78% |
Span: 156bp (19.4%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|145349140|ref|XP_001418998.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 65.45% |
Span: 165bp (20.5%) |
Frame: 1 |
| predicted |
| Match: gi|7673359|gb|AAF66825.1| |
score: 75.5 |
e-value: 1e-48 |
Identity: 83.64% |
Span: 165bp (20.5%) |
Frame: 3 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|71018821|ref|XP_759641.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 60.32% |
Span: 189bp (23.5%) |
Frame: 1 |
| gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521] >gi|46099399|gb|EAK84632.1| hypothe... |
| Match: gi|50725435|dbj|BAD32907.1| |
score: 72.8 |
e-value: 3e-11 |
Identity: 54.29% |
Span: 210bp (26.1%) |
Frame: 1 |
| gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|115468728|ref|NP_001057963.1| |
score: 72.8 |
e-value: 3e-11 |
Identity: 54.29% |
Span: 210bp (26.1%) |
Frame: 1 |
| Os06g0589700 |
| Match: gi|157356756|emb|CAO62958.1| |
score: 72.8 |
e-value: 3e-11 |
Identity: 57.35% |
Span: 204bp (25.3%) |
Frame: 1 |
| unnamed |
| Match: gi|52346030|ref|NP_001005062.1| |
score: 71.2 |
e-value: 8e-11 |
Identity: 52.05% |
Span: 219bp (27.2%) |
Frame: 1 |
| MGC89376 |
| Match: gi|125555900|gb|EAZ01506.1| |
score: 71.2 |
e-value: 8e-11 |
Identity: 55.38% |
Span: 195bp (24.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|13560783|gb|AAK30205.1|AF349964_1 |
score: 65.1 |
e-value: 4e-40 |
Identity: 74.55% |
Span: 165bp (20.5%) |
Frame: 3 |
| poly(A)-binding protein [Daucus carota] |
| Match: gi|147773643|emb|CAN76464.1| |
score: 62.8 |
e-value: 6e-41 |
Identity: 72.73% |
Span: 165bp (20.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|147801504|emb|CAN61506.1| |
score: 58.5 |
e-value: 1e-17 |
Identity: 73.17% |
Span: 123bp (15.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|118486179|gb|ABK94932.1| |
score: 57.8 |
e-value: 4e-37 |
Identity: 69.23% |
Span: 156bp (19.4%) |
Frame: 3 |
| unknown [Populus trichocarpa] |
| Match: gi|157345168|emb|CAO71896.1| |
score: 57.4 |
e-value: 1e-38 |
Identity: 69.09% |
Span: 165bp (20.5%) |
Frame: 3 |
| unnamed |
| Match: gi|7528270|gb|AAF63202.1|AF240679_1 |
score: 56.6 |
e-value: 1e-35 |
Identity: 67.31% |
Span: 156bp (19.4%) |
Frame: 3 |
| poly(A)-binding protein [Cucumis sativus] |
| Match: gi|147801504|emb|CAN61506.1| |
score: 53.9 |
e-value: 1e-17 |
Identity: 56.36% |
Span: 165bp (20.5%) |
Frame: 3 |
| hypothetical |
| Match: gi|106879567|emb|CAJ38367.1| |
score: 51.2 |
e-value: 1e-40 |
Identity: 67.86% |
Span: 162bp (20.1%) |
Frame: 3 |
| polyA-binding protein [Plantago major] |
| Match: gi|147839912|emb|CAN65906.1| |
score: 51.2 |
e-value: 7e-32 |
Identity: 63.46% |
Span: 156bp (19.4%) |
Frame: 3 |
| hypothetical |
| Match: gi|7673355|gb|AAF66823.1|AF190655_1 |
score: 48.1 |
e-value: 2e-35 |
Identity: 55.77% |
Span: 156bp (19.4%) |
Frame: 3 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|7673357|gb|AAF66824.1|AF190656_1 |
score: 48.1 |
e-value: 2e-35 |
Identity: 55.77% |
Span: 156bp (19.4%) |
Frame: 3 |
| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|115477976|ref|NP_001062583.1| |
score: 41.6 |
e-value: 5e-32 |
Identity: 56.36% |
Span: 156bp (19.4%) |
Frame: 3 |
| Os09g0115400 [Oryza sativa (japonica cultivar-group)] >gi46389987|dbj|BAD16229.1| putative poly(A)-binding protein [O... |
| Match: gi|70663933|emb|CAE02947.3| |
score: 39.7 |
e-value: 2e-29 |
Identity: 60% |
Span: 150bp (18.6%) |
Frame: 3 |
| OSJNBa0014K14.19 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|125590923|gb|EAZ31273.1| |
score: 39.7 |
e-value: 2e-29 |
Identity: 60% |
Span: 150bp (18.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|115459296|ref|NP_001053248.1| |
score: 39.7 |
e-value: 2e-29 |
Identity: 60% |
Span: 150bp (18.6%) |
Frame: 3 |
| Os04g0504800 [Oryza sativa (japonica cultivar-group)] >gi32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (jap... |
| Match: gi|125548950|gb|EAY94772.1| |
score: 39.7 |
e-value: 2e-29 |
Identity: 60% |
Span: 150bp (18.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|1737492|gb|AAB38974.1| |
score: 37.7 |
e-value: 7e-31 |
Identity: 55.56% |
Span: 156bp (19.4%) |
Frame: 3 |
| poly(A)-binding protein [Triticum aestivum] |
| Match: gi|18402769|ref|NP_564554.1| |
score: 37.4 |
e-value: 5e-30 |
Identity: 55.77% |
Span: 147bp (18.3%) |
Frame: 3 |
| PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor [Arabidopsis thaliana] >gi10120431|gb|A... |
| Match: gi|2213871|gb|AAB61594.1| |
score: 35 |
e-value: 9e-29 |
Identity: 52.94% |
Span: 150bp (18.6%) |
Frame: 3 |
| poly(A)-binding protein [Mesembryanthemum crystallinum] |
| Match: gi|34015127|gb|AAQ56324.1| |
score: 25 |
e-value: 4e-28 |
Identity: 54.76% |
Span: 126bp (15.7%) |
Frame: 3 |
| putative poly(A)-binding protein [Oryza sativa Japonica Group] |
| Match: gi|115475838|ref|NP_001061515.1| |
score: 25 |
e-value: 4e-28 |
Identity: 54.76% |
Span: 126bp (15.7%) |
Frame: 3 |
| Os08g0314800 [Oryza sativa (japonica cultivar-group)] >gi35215045|dbj|BAC92404.1| putative polyadenylate-binding prot... |
| Match: gi|125561055|gb|EAZ06503.1| |
score: 25 |
e-value: 4e-28 |
Identity: 54.76% |
Span: 126bp (15.7%) |
Frame: 3 |
| hypothetical |
| Match: gi|62321231|dbj|BAD94406.1| |
score: 24.6 |
e-value: 2e-25 |
Identity: 44.44% |
Span: 162bp (20.1%) |
Frame: 3 |
| gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Arabidopsis thaliana] |
| Match: gi|15227815|ref|NP_179916.1| |
score: 24.6 |
e-value: 2e-25 |
Identity: 44.44% |
Span: 162bp (20.1%) |
Frame: 3 |
| gi|15227815|ref|NP_179916.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|7439964|pir||T0... |
| Match: gi|13430610|gb|AAK25927.1|AF360217_1 |
score: 24.6 |
e-value: 2e-25 |
Identity: 44.44% |
Span: 162bp (20.1%) |
Frame: 3 |
| putative |
|
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At1G49760.1 |
score: 117 |
e-value: 6e-32 |
Identity: 79.75% |
Span: 231bp (28.7%) |
Frame: 1 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G23350.1 |
score: 114 |
e-value: 2e-27 |
Identity: 69.77% |
Span: 228bp (28.3%) |
Frame: 1 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At4G34110.1 |
score: 99.4 |
e-value: 2e-21 |
Identity: 73.97% |
Span: 219bp (27.2%) |
Frame: 1 |
| Symbols: PAB2 | PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding | chr4:16337714-16339896 FORWARD |
| Match: At1G71770.1 |
score: 85.5 |
e-value: 3e-17 |
Identity: 61.33% |
Span: 225bp (28.0%) |
Frame: 1 |
| Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN); RNA binding | chr1:26994439-26997109 REVERSE |
| Match: At1G22760.1 |
score: 82.8 |
e-value: 2e-16 |
Identity: 69.64% |
Span: 168bp (20.9%) |
Frame: 1 |
| Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3); RNA binding | chr1:8055588-8058788 FORWARD |
| Match: At2G36660.1 |
score: 69.3 |
e-value: 3e-12 |
Identity: 58.62% |
Span: 174bp (21.6%) |
Frame: 1 |
| Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7); RNA binding / translation initiation factor | chr2:15368555-153714... |
| Match: At1G49760.1 |
score: 37.4 |
e-value: 6e-32 |
Identity: 55.77% |
Span: 147bp (18.3%) |
Frame: 3 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At2G23350.1 |
score: 24.6 |
e-value: 2e-27 |
Identity: 44.44% |
Span: 162bp (20.1%) |
Frame: 3 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
|
