| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270252309|emb|CBI18920.1| |
score: 286 |
e-value: 1e-75 |
Identity: 62.99% |
Span: 750bp (94.1%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224065743|ref|XP_002301949.1| |
score: 278 |
e-value: 4e-73 |
Identity: 61.33% |
Span: 768bp (96.4%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222843675|gb|EEE81222.1| predicted protein [Populus trichocarpa] |
| Match: gi|255556673|ref|XP_002519370.1| |
score: 274 |
e-value: 9e-72 |
Identity: 63% |
Span: 672bp (84.3%) |
Frame: 1 |
| ribosomal pseudouridine synthase, putative [Ricinus communis] >gi223541437|gb|EEF42987.1| ribosomal pseudouridine syn... |
| Match: gi|42572121|ref|NP_974151.1| |
score: 254 |
e-value: 6e-66 |
Identity: 54.58% |
Span: 744bp (93.4%) |
Frame: 1 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA ps... |
| Match: gi|42563248|ref|NP_177732.2| |
score: 254 |
e-value: 6e-66 |
Identity: 54.58% |
Span: 744bp (93.4%) |
Frame: 1 |
| pseudouridine synthase family protein [Arabidopsis thaliana] |
| Match: gi|218198893|gb|EEC81320.1| |
score: 249 |
e-value: 2e-64 |
Identity: 59.62% |
Span: 630bp (79.0%) |
Frame: 1 |
| hypothetical protein OsI_24484 [Oryza sativa Indica Group] |
| Match: gi|115469990|ref|NP_001058594.1| |
score: 247 |
e-value: 1e-63 |
Identity: 59.15% |
Span: 630bp (79.0%) |
Frame: 1 |
| Os06g0717400 [Oryza sativa (japonica cultivar-group)] >gi75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA pseudourin... |
| Match: gi|6721111|gb|AAF26765.1|AC007396_14 |
score: 242 |
e-value: 3e-62 |
Identity: 51.35% |
Span: 681bp (85.4%) |
Frame: 1 |
| T4O12.25 [Arabidopsis thaliana] |
| Match: gi|242097088|ref|XP_002439034.1| |
score: 240 |
e-value: 1e-61 |
Identity: 55.75% |
Span: 669bp (83.9%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] >gi241917257|gb|EER90401.1| hypothetical protein SORBIDRA... |
| Match: gi|147771519|emb|CAN66750.1| |
score: 239 |
e-value: 2e-61 |
Identity: 54.31% |
Span: 708bp (88.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|195644818|gb|ACG41877.1| |
score: 232 |
e-value: 3e-59 |
Identity: 59.31% |
Span: 603bp (75.7%) |
Frame: 1 |
| RNA binding protein [Zea mays] |
| Match: gi|226491450|ref|NP_001140404.1| |
score: 231 |
e-value: 7e-59 |
Identity: 58.82% |
Span: 603bp (75.7%) |
Frame: 1 |
| hypothetical protein LOC100272459 [Zea mays] >gi194699356|gb|ACF83762.1| unknown [Zea mays] |
| Match: gi|18855035|gb|AAL79727.1|AC091774_18 |
score: 218 |
e-value: 8e-55 |
Identity: 53.77% |
Span: 630bp (79.0%) |
Frame: 1 |
| putative ribosomal large subunit pseudouridine synthase [Oryza sativa Japonica Group] |
| Match: gi|224083169|ref|XP_002306957.1| |
score: 214 |
e-value: 1e-53 |
Identity: 61.34% |
Span: 579bp (72.6%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222856406|gb|EEE93953.1| predicted protein [Populus trichocarpa] |
| Match: gi|159487279|ref|XP_001701661.1| |
score: 161 |
e-value: 6e-38 |
Identity: 51.55% |
Span: 483bp (60.6%) |
Frame: 1 |
| RNA pseudouridine synthase [Chlamydomonas reinhardtii] >gi158280880|gb|EDP06636.1| RNA pseudouridine synthase [Chlamy... |
| Match: gi|226455748|gb|EEH53051.1| |
score: 150 |
e-value: 2e-34 |
Identity: 43.75% |
Span: 555bp (69.6%) |
Frame: 1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|218438495|ref|YP_002376824.1| |
score: 135 |
e-value: 4e-30 |
Identity: 40.22% |
Span: 552bp (69.3%) |
Frame: 1 |
| pseudouridine synthase, RluA family [Cyanothece sp. PCC 7424] >gi218171223|gb|ACK69956.1| pseudouridine synthase, Rlu... |
| Match: gi|255070545|ref|XP_002507354.1| |
score: 134 |
e-value: 1e-29 |
Identity: 39.71% |
Span: 624bp (78.3%) |
Frame: 1 |
| predicted protein [Micromonas sp. RCC299] >gi226522629|gb|ACO68612.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|294507190|ref|YP_003571248.1| |
score: 133 |
e-value: 2e-29 |
Identity: 42.61% |
Span: 528bp (66.2%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D [Salinibacter ruber] >gi294343518|emb|CBH24296.1| Ribosomal large su... |
| Match: gi|166367953|ref|YP_001660226.1| |
score: 133 |
e-value: 2e-29 |
Identity: 40.11% |
Span: 561bp (70.4%) |
Frame: 1 |
| ribosomal large subunit pseudouridine synthase D [Microcystis aeruginosa NIES-843] >gi166090326|dbj|BAG05034.1| ribos... |
| Match: gi|116058513|emb|CAL53702.1| |
score: 133 |
e-value: 2e-29 |
Identity: 44.57% |
Span: 531bp (66.6%) |
Frame: 1 |
| ribosomal large subunit pseudouridine syn (ISS) [Ostreococcus tauri] |
| Match: gi|196258950|ref|ZP_03157483.1| |
score: 132 |
e-value: 3e-29 |
Identity: 39.36% |
Span: 564bp (70.8%) |
Frame: 1 |
| pseudouridine synthase, RluA family [Cyanothece sp. PCC 7822] >gi196200270|gb|EDX95092.1| pseudouridine synthase, Rlu... |
| Match: gi|254423656|ref|ZP_05037374.1| |
score: 132 |
e-value: 3e-29 |
Identity: 40.54% |
Span: 555bp (69.6%) |
Frame: 1 |
| pseudouridine synthase, RluA family [Synechococcus sp. PCC 7335] >gi196191145|gb|EDX86109.1| pseudouridine synthase, ... |
| Match: gi|159029548|emb|CAO87700.1| |
score: 132 |
e-value: 3e-29 |
Identity: 39.57% |
Span: 561bp (70.4%) |
Frame: 1 |
| rluD [Microcystis aeruginosa PCC 7806] |
| Match: gi|268611664|ref|ZP_06145391.1| |
score: 131 |
e-value: 9e-29 |
Identity: 39.8% |
Span: 603bp (75.7%) |
Frame: 1 |
| RluA family pseudouridine synthase [Ruminococcus flavefaciens FD-1] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G76050.2 |
score: 254 |
e-value: 3e-68 |
Identity: 54.58% |
Span: 744bp (93.4%) |
Frame: 1 |
| pseudouridine synthase family protein | chr1:28545752-28547720 FORWARD |
| Match: At1G76050.1 |
score: 254 |
e-value: 3e-68 |
Identity: 54.58% |
Span: 744bp (93.4%) |
Frame: 1 |
| pseudouridine synthase family protein | chr1:28545752-28546913 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q3ECD0 |
score: 254 |
e-value: 4e-67 |
Identity: 54.58% |
Span: 744bp (93.4%) |
Frame: 1 |
| RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1 |
| Match: Q5Z8P2 |
score: 247 |
e-value: 7e-65 |
Identity: 59.15% |
Span: 630bp (79.0%) |
Frame: 1 |
| RNA pseudourine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1 |
| Match: O67638 |
score: 115 |
e-value: 3e-25 |
Identity: 35.08% |
Span: 567bp (71.1%) |
Frame: 1 |
| Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus GN=aq_1758 PE=3 SV=1 |
| Match: Q45480 |
score: 113 |
e-value: 1e-24 |
Identity: 36.76% |
Span: 555bp (69.6%) |
Frame: 1 |
| Uncharacterized RNA pseudouridine synthase ylyB OS=Bacillus subtilis GN=ylyB PE=3 SV=3 |
| Match: P74346 |
score: 113 |
e-value: 2e-24 |
Identity: 38.51% |
Span: 522bp (65.5%) |
Frame: 1 |
| Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain PCC 6803) GN=slr1629 PE=3 SV=1 |
| Match: P50513 |
score: 111 |
e-value: 5e-24 |
Identity: 39.33% |
Span: 531bp (66.6%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis GN=rluD PE=3 SV=2 |
| Match: O50310 |
score: 109 |
e-value: 2e-23 |
Identity: 34.97% |
Span: 543bp (68.1%) |
Frame: 1 |
| Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0723 PE=3 SV=1 |
| Match: Q9CKA6 |
score: 104 |
e-value: 8e-22 |
Identity: 36.26% |
Span: 513bp (64.4%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Pasteurella multocida GN=rluD PE=3 SV=1 |
| Match: Q8DEV0 |
score: 103 |
e-value: 1e-21 |
Identity: 36.56% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus GN=rluD PE=3 SV=1 |
| Match: P65835 |
score: 103 |
e-value: 1e-21 |
Identity: 36.02% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Shigella flexneri GN=rluD PE=3 SV=2 |
| Match: P65834 |
score: 103 |
e-value: 1e-21 |
Identity: 36.02% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O6 GN=rluD PE=3 SV=2 |
| Match: P65836 |
score: 103 |
e-value: 2e-21 |
Identity: 36.56% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhimurium GN=rluD PE=1 SV=2 |
| Match: P65837 |
score: 103 |
e-value: 2e-21 |
Identity: 36.56% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhi GN=rluD PE=3 SV=2 |
| Match: P33643 |
score: 103 |
e-value: 2e-21 |
Identity: 35.48% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli (strain K12) GN=rluD PE=1 SV=4 |
| Match: Q8X9F0 |
score: 103 |
e-value: 2e-21 |
Identity: 36.02% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O157:H7 GN=rluD PE=1 SV=3 |
| Match: Q87S65 |
score: 101 |
e-value: 5e-21 |
Identity: 35.71% |
Span: 540bp (67.8%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio parahaemolyticus GN=rluD PE=3 SV=1 |
| Match: Q8ZBV7 |
score: 101 |
e-value: 7e-21 |
Identity: 36.41% |
Span: 552bp (69.3%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Yersinia pestis GN=rluD PE=3 SV=1 |
| Match: P44445 |
score: 101 |
e-value: 7e-21 |
Identity: 34.62% |
Span: 540bp (67.8%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus influenzae GN=rluD PE=3 SV=1 |
| Match: Q9L7A7 |
score: 100 |
e-value: 9e-21 |
Identity: 33.33% |
Span: 543bp (68.1%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus ducreyi GN=rluD PE=3 SV=2 |
| Match: Q9K0B0 |
score: 99.8 |
e-value: 2e-20 |
Identity: 38.12% |
Span: 540bp (67.8%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup B GN=rluD PE=3 SV=1 |
| Match: Q9JVB6 |
score: 99 |
e-value: 3e-20 |
Identity: 37.57% |
Span: 540bp (67.8%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Neisseria meningitidis serogroup A GN=rluD PE=3 SV=1 |
| Match: Q9PET9 |
score: 98.6 |
e-value: 4e-20 |
Identity: 34.92% |
Span: 567bp (71.1%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Xylella fastidiosa GN=rluD PE=3 SV=1 |
| Match: Q87AR7 |
score: 98.2 |
e-value: 6e-20 |
Identity: 34.92% |
Span: 567bp (71.1%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rluD PE=3 ... |
| Match: Q45826 |
score: 97.8 |
e-value: 7e-20 |
Identity: 36.57% |
Span: 525bp (65.9%) |
Frame: 1 |
| Uncharacterized RNA pseudouridine synthase Caur_0901 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-... |
| Match: Q8P682 |
score: 96.3 |
e-value: 2e-19 |
Identity: 32.65% |
Span: 588bp (73.8%) |
Frame: 1 |
| Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris GN=rluD PE=3 SV=1 |
|
| 10 lower scoring hits censored -- only 25 best hits are stored. |
