| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|42563248|ref|NP_177732.2| |
score: 239.2 |
e-value: 9.1e-62 |
Identity: 53.5% |
Span: 720bp (90.3%) |
Frame: 2 |
| pseudouridine synthase family protein [Arabidopsis thaliana] |
| Match: gi|42572121|ref|NP_974151.1| |
score: 239.2 |
e-value: 9.1e-62 |
Identity: 53.5% |
Span: 720bp (90.3%) |
Frame: 2 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA ps... |
| Match: gi|54291043|dbj|BAD61720.1| |
score: 231.5 |
e-value: 1.9e-59 |
Identity: 58.05% |
Span: 606bp (76.0%) |
Frame: 2 |
| gi|54291043|dbj|BAD61720.1| ribosomal large subunit pseudouridine synthase-like [Oryza sativa (japonica cultivar-grou... |
| Match: gi|6721111|gb|AAF26765.1| |
score: 226.9 |
e-value: 4.6e-58 |
Identity: 50.2% |
Span: 657bp (82.4%) |
Frame: 2 |
| gi|6721111|gb|AAF26765.1| T4O12.25 [Arabidopsis thaliana] |
| Match: gi|18855035|gb|AAL79727.1| |
score: 202.2 |
e-value: 1.2e-50 |
Identity: 52.45% |
Span: 606bp (76.0%) |
Frame: 2 |
| gi|18855035|gb|AAL79727.1| putative ribosomal large subunit pseudouridine synthase [Oryza sativa] |
| Match: gi|9957317|gb|AAG09315.1| |
score: 120.2 |
e-value: 6.1e-26 |
Identity: 37.08% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|9957317|gb|AAG09315.1| hypothetical protein [Nostoc sp. PCC 7120] >gi|17129867|dbj|BAB72480.1| alr0522 [Nostoc sp.... |
| Match: gi|65321221|ref|ZP_00394180.1| |
score: 120.2 |
e-value: 6.1e-26 |
Identity: 39.78% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|65321221|ref|ZP_00394180.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Bacillus anthracis str. A2012] |
| Match: gi|49186742|ref|YP_029994.1| |
score: 119.8 |
e-value: 8e-26 |
Identity: 39.78% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|49186742|ref|YP_029994.1| RNA pseudouridylate synthase [Bacillus anthracis str. Sterne] >gi|49180669|gb|AAT56045.1... |
| Match: gi|68193273|gb|EAN07925.1| |
score: 119.8 |
e-value: 8e-26 |
Identity: 38.42% |
Span: 528bp (66.2%) |
Frame: 2 |
| gi|68193273|gb|EAN07925.1| Pseudouridine synthase, RluD [Mesorhizobium sp. BNC1] >gi|69274833|ref|ZP_00610745.1| Pseu... |
| Match: gi|15806790|ref|NP_295512.1| |
score: 119.8 |
e-value: 8e-26 |
Identity: 40.24% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|15806790|ref|NP_295512.1| ribosomal large subunit pseudouridine synthase D [Deinococcus radiodurans] gi|7473801|pi... |
| Match: gi|75909134|ref|YP_323430.1| |
score: 119.8 |
e-value: 8e-26 |
Identity: 36.72% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|75909134|ref|YP_323430.1| Pseudouridine synthase, RluD [Anabaena variabilis ATCC 29413] >gi|75702859|gb|ABA22535.1... |
| Match: gi|30021981|ref|NP_833612.1| |
score: 119.4 |
e-value: 1e-25 |
Identity: 39.23% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|30021981|ref|NP_833612.1| Ribosomal large subunit pseudouridine synthase D [Bacillus cereus ATCC 14579] gi|2989753... |
| Match: gi|49478436|ref|YP_037954.1| |
score: 119.4 |
e-value: 1e-25 |
Identity: 39.78% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|49478436|ref|YP_037954.1| ribosomal large subunit pseudouridine synthase D [Bacillus thuringiensis serovar konkuki... |
| Match: gi|51975065|gb|AAU16615.1| |
score: 118.6 |
e-value: 1.8e-25 |
Identity: 39.23% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|51975065|gb|AAU16615.1| pseudouridylate synthase (pseudouridine synthase) [Bacillus cereus E33L] >gi|52141596|ref|... |
| Match: gi|75764813|ref|ZP_00744194.1| |
score: 118.2 |
e-value: 2.3e-25 |
Identity: 39.23% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|75764813|ref|ZP_00744194.1| Ribosomal large subunit pseudouridine synthase D [Bacillus thuringiensis serovar israe... |
| Match: gi|71836513|ref|ZP_00676282.1| |
score: 118.2 |
e-value: 2.3e-25 |
Identity: 39.43% |
Span: 525bp (65.9%) |
Frame: 2 |
| gi|71836513|ref|ZP_00676282.1| Pseudouridine synthase, RluD [Pelobacter propionicus DSM 2379] >gi|71743343|gb|EAO3849... |
| Match: gi|33641153|emb|CAE22283.1| |
score: 117.9 |
e-value: 3e-25 |
Identity: 38.27% |
Span: 576bp (72.3%) |
Frame: 2 |
| gi|33641153|emb|CAE22283.1| putative pseudouridylate synthase specific to ribosomal large subunit [Prochlorococcus ma... |
| Match: gi|67920300|ref|ZP_00513820.1| |
score: 117.1 |
e-value: 5.2e-25 |
Identity: 38.29% |
Span: 525bp (65.9%) |
Frame: 2 |
| gi|67920300|ref|ZP_00513820.1| Pseudouridine synthase, RluD [Crocosphaera watsonii WH 8501] >gi|67857784|gb|EAM53023.... |
| Match: gi|18145514|dbj|BAB81556.1| |
score: 117.1 |
e-value: 5.2e-25 |
Identity: 38.46% |
Span: 540bp (67.8%) |
Frame: 2 |
| gi|18145514|dbj|BAB81556.1| conserved hypothetical protein [Clostridium perfringens str. 13] >gi|18310832|ref|NP_5627... |
| Match: gi|68183778|ref|ZP_00556750.1| |
score: 116.7 |
e-value: 6.8e-25 |
Identity: 40.12% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|68183778|ref|ZP_00556750.1| Pseudouridine synthase, RluD [Jannaschia sp. CCS1] >gi|67976087|gb|EAM65717.1| Pseudou... |
| Match: gi|47570307|ref|ZP_00240954.1| |
score: 115.9 |
e-value: 1.2e-24 |
Identity: 38.67% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|47570307|ref|ZP_00240954.1| ribosomal large subunit pseudouridine synthase D [Bacillus cereus G9241] >gi|47553016|... |
| Match: gi|68269769|ref|ZP_00576025.1| |
score: 114.8 |
e-value: 2.6e-24 |
Identity: 36.07% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|68269769|ref|ZP_00576025.1| Pseudouridine synthase, RluD [Moorella thermoacetica ATCC 39073] >gi|68237826|gb|EAN20... |
| Match: gi|58337436|ref|YP_194021.1| |
score: 114.8 |
e-value: 2.6e-24 |
Identity: 36.52% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|58337436|ref|YP_194021.1| pseudouridine synthase [Lactobacillus acidophilus NCFM] >gi|58254753|gb|AAV42990.1| pseu... |
| Match: gi|33639457|emb|CAE08841.1| |
score: 114.4 |
e-value: 3.4e-24 |
Identity: 40.35% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|33639457|emb|CAE08841.1| putative pseudouridylate synthase specific to ribosomal large subunit [Synechococcus sp. ... |
| Match: gi|78213965|ref|YP_382744.1| |
score: 113.6 |
e-value: 5.7e-24 |
Identity: 40.35% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|78213965|ref|YP_382744.1| Pseudouridine synthase, RluD [Synechococcus sp. CC9605] >gi|78198424|gb|ABB36189.1| Pseu... |
| Match: gi|72383396|ref|YP_292751.1| |
score: 113.6 |
e-value: 5.7e-24 |
Identity: 40.94% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|72383396|ref|YP_292751.1| pseudouridine synthase, RluD [Prochlorococcus marinus str. NATL2A] >gi|72003246|gb|AAZ59... |
| Match: gi|67916216|ref|ZP_00509934.1| |
score: 113.2 |
e-value: 7.5e-24 |
Identity: 35.71% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|67916216|ref|ZP_00509934.1| Pseudouridine synthase, RluD [Clostridium thermocellum ATCC 27405] >gi|67849819|gb|EAM... |
| Match: gi|49475182|ref|YP_033223.1| |
score: 113.2 |
e-value: 7.5e-24 |
Identity: 34.81% |
Span: 540bp (67.8%) |
Frame: 2 |
| gi|49475182|ref|YP_033223.1| Ribosomal large subunit pseudouridine synthase D [Bartonella henselae str. Houston-1] >g... |
| Match: gi|20807974|ref|NP_623145.1| |
score: 113.2 |
e-value: 7.5e-24 |
Identity: 39.08% |
Span: 522bp (65.5%) |
Frame: 2 |
| gi|20807974|ref|NP_623145.1| Pseudouridylate synthase, 23S RNA-specific [Thermoanaerobacter tengcongensis] gi|2051654... |
| Match: gi|76587739|gb|EAO64162.1| |
score: 112.5 |
e-value: 1.3e-23 |
Identity: 38.51% |
Span: 522bp (65.5%) |
Frame: 2 |
| gi|76587739|gb|EAO64162.1| Pseudouridine synthase, RluD [Thermoanaerobacter ethanolicus ATCC 33223] >gi|76796894|ref|... |
| Match: gi|23126364|ref|ZP_00108262.1| |
score: 112.5 |
e-value: 1.3e-23 |
Identity: 38.46% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|23126364|ref|ZP_00108262.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Nostoc punctiforme] |
| Match: gi|56419681|ref|YP_146999.1| |
score: 112.1 |
e-value: 1.7e-23 |
Identity: 40.24% |
Span: 507bp (63.6%) |
Frame: 2 |
| hypothetical protein GK1146 [Geobacillus kaustophilus HTA426] >gi229498191|ref|ZP_04391888.1| pseudouridine synthase,... |
| Match: gi|71674559|ref|ZP_00672306.1| |
score: 112.1 |
e-value: 1.7e-23 |
Identity: 40.83% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|71674559|ref|ZP_00672306.1| Pseudouridine synthase, RluD [Trichodesmium erythraeum IMS101] >gi|71672614|gb|EAO2927... |
| Match: gi|68055456|ref|ZP_00539601.1| |
score: 111.7 |
e-value: 2.2e-23 |
Identity: 39.05% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|68055456|ref|ZP_00539601.1| Pseudouridine synthase, RluD [Exiguobacterium sp. 255-15] >gi|68007962|gb|EAM87201.1| ... |
| Match: gi|77685430|ref|ZP_00800830.1| |
score: 111.7 |
e-value: 2.2e-23 |
Identity: 38.51% |
Span: 522bp (65.5%) |
Frame: 2 |
| gi|77685430|ref|ZP_00800830.1| Pseudouridine synthase, RluD [Alkaliphilus metalliredigenes QYMF] >gi|77638785|gb|EAO8... |
| Match: gi|10175162|dbj|BAB06261.1| |
score: 111.3 |
e-value: 2.8e-23 |
Identity: 35.71% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|10175162|dbj|BAB06261.1| BH2542 [Bacillus halodurans C-125] >gi|15615105|ref|NP_243408.1| hypothetical protein BH2... |
| Match: gi|33239671|ref|NP_874613.1| |
score: 111.3 |
e-value: 2.8e-23 |
Identity: 35.71% |
Span: 585bp (73.4%) |
Frame: 2 |
| gi|33239671|ref|NP_874613.1| 23S RNA-specific pseudouridylate synthase [Prochlorococcus marinus subsp. marinus str. C... |
| Match: gi|15025103|gb|AAK80072.1| |
score: 110.9 |
e-value: 3.7e-23 |
Identity: 37.29% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|15025103|gb|AAK80072.1| Predicted pseudouridylate synthase, YLYB B.subtilis ortholog [Clostridium acetobutylicum A... |
| Match: gi|66797290|ref|ZP_00396050.1| |
score: 110.9 |
e-value: 3.7e-23 |
Identity: 37.02% |
Span: 543bp (68.1%) |
Frame: 2 |
| gi|66797290|ref|ZP_00396050.1| Pseudouridine synthase, RluD [Deinococcus geothermalis DSM 11300] >gi|66782393|gb|EAL8... |
| Match: gi|78610202|emb|CAI55251.1| |
score: 110.5 |
e-value: 4.9e-23 |
Identity: 37.71% |
Span: 525bp (65.9%) |
Frame: 2 |
| gi|78610202|emb|CAI55251.1| Pseudouridylate synthase, 23S rRNA-specific [Lactobacillus sakei subsp. sakei 23K] |
| Match: gi|78044742|ref|YP_360337.1| |
score: 110.2 |
e-value: 6.3e-23 |
Identity: 38.8% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|78044742|ref|YP_360337.1| ribosomal large subunit pseudouridine synthase, RluA family [Carboxydothermus hydrogenof... |
| Match: gi|47524301|gb|AAT34906.1| |
score: 109.8 |
e-value: 8.3e-23 |
Identity: 35.2% |
Span: 582bp (73.0%) |
Frame: 2 |
| gi|47524301|gb|AAT34906.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Brucella suis 1330] |
| Match: gi|15606824|ref|NP_214204.1| |
score: 109.4 |
e-value: 1.1e-22 |
Identity: 34.78% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|15606824|ref|NP_214204.1| hypothetical protein [Aquifex aeolicus] gi|3915479|sp|O67638|YH58_AQUAE Hypothetical pro... |
| Match: gi|76789398|ref|YP_328484.1| |
score: 109 |
e-value: 1.4e-22 |
Identity: 42.6% |
Span: 504bp (63.2%) |
Frame: 2 |
| gi|76789398|ref|YP_328484.1| ribosomal large subunit pseudouridine synthase D [Chlamydia trachomatis A/HAR-13] >gi|76... |
| Match: gi|35210633|dbj|BAC88014.1| |
score: 109 |
e-value: 1.4e-22 |
Identity: 38.2% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|35210633|dbj|BAC88014.1| glr0073 [Gloeobacter violaceus PCC 7421] >gi|37519642|ref|NP_923019.1| probable pseudouri... |
| Match: gi|15605391|ref|NP_220177.1| |
score: 109 |
e-value: 1.4e-22 |
Identity: 42.6% |
Span: 504bp (63.2%) |
Frame: 2 |
| gi|15605391|ref|NP_220177.1| (Pseudouridine Synthase) [Chlamydia trachomatis] gi|7449294|pir||D71487 probable (pseudo... |
| Match: gi|13473214|ref|NP_104781.1| |
score: 108.6 |
e-value: 1.8e-22 |
Identity: 37.06% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|13473214|ref|NP_104781.1| pseudouridine synthase [Mesorhizobium loti] gi|14023962|dbj|BAB50567.1| pseudouridine sy... |
| Match: gi|56750446|ref|YP_171147.1| |
score: 108.6 |
e-value: 1.8e-22 |
Identity: 36.31% |
Span: 537bp (67.4%) |
Frame: 2 |
| gi|56750446|ref|YP_171147.1| ribosomal large subunit pseudouridine synthase D [Synechococcus elongatus PCC 6301] >gi|... |
| Match: gi|19715021|gb|AAL95568.1| |
score: 108.6 |
e-value: 1.8e-22 |
Identity: 36.26% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|19715021|gb|AAL95568.1| Ribosomal large subunit pseudouridine synthase D [Fusobacterium nucleatum subsp. nucleatum... |
| Match: gi|49239435|emb|CAF25784.1| |
score: 108.6 |
e-value: 1.8e-22 |
Identity: 33.7% |
Span: 540bp (67.8%) |
Frame: 2 |
| gi|49239435|emb|CAF25784.1| Ribosomal large subunit pseudouridine synthase D [Bartonella quintana] |
| Match: gi|69301704|ref|ZP_00622919.1| |
score: 108.2 |
e-value: 2.4e-22 |
Identity: 40.76% |
Span: 471bp (59.1%) |
Frame: 2 |
| gi|69301704|ref|ZP_00622919.1| Pseudouridine synthase, RluD [Silicibacter sp. TM1040] >gi|69132149|gb|EAN55461.1| Pse... |
| Match: gi|16331032|ref|NP_441760.1| |
score: 108.2 |
e-value: 2.4e-22 |
Identity: 37.65% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|16331032|ref|NP_441760.1| hypothetical protein [Synechocystis sp. PCC 6803] gi|3915482|sp|P74346|YG29_SYNY3 Hypoth... |
| Match: gi|78185708|ref|YP_378142.1| |
score: 107.5 |
e-value: 4.1e-22 |
Identity: 38.6% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|78185708|ref|YP_378142.1| Pseudouridine synthase, RluD [Synechococcus sp. CC9902] >gi|78170002|gb|ABB27099.1| Pseu... |
| Match: gi|28378455|ref|NP_785347.1| |
score: 107.5 |
e-value: 4.1e-22 |
Identity: 36.22% |
Span: 555bp (69.6%) |
Frame: 2 |
| gi|28378455|ref|NP_785347.1| pseudouridylate synthase [Lactobacillus plantarum WCFS1] gi|28271291|emb|CAD64195.1| pse... |
| Match: gi|78186656|ref|YP_374699.1| |
score: 107.5 |
e-value: 4.1e-22 |
Identity: 37.06% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|78186656|ref|YP_374699.1| Pseudouridine synthase, RluD [Pelodictyon luteolum DSM 273] >gi|78166558|gb|ABB23656.1| ... |
| Match: gi|27262446|gb|AAN87504.1| |
score: 107.1 |
e-value: 5.4e-22 |
Identity: 38.25% |
Span: 549bp (68.9%) |
Frame: 2 |
| gi|27262446|gb|AAN87504.1| Ribosomal large subunit pseudouridine synthase D [Heliobacillus mobilis] |
| Match: gi|34497647|ref|NP_901862.1| |
score: 106.7 |
e-value: 7e-22 |
Identity: 38.24% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|34497647|ref|NP_901862.1| pseudouridine synthase D [Chromobacterium violaceum ATCC 12472] gi|34103503|gb|AAQ59865.... |
| Match: gi|17982277|gb|AAL51558.1| |
score: 106.7 |
e-value: 7e-22 |
Identity: 34.69% |
Span: 582bp (73.0%) |
Frame: 2 |
| gi|17982277|gb|AAL51558.1| RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE D [Brucella melitensis 16M] >gi|17986660|re... |
| Match: gi|62516048|ref|ZP_00387416.1| |
score: 106.7 |
e-value: 7e-22 |
Identity: 37.87% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|62516048|ref|ZP_00387416.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Lactobacillus delbrueckii subsp.... |
| Match: gi|7449280|pir||B69883 |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 36.52% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|7449280|pir||B69883 conserved hypothetical protein ylyB - Bacillus subtilis |
| Match: gi|53728774|ref|ZP_00135229.2| |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 37.22% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|53728774|ref|ZP_00135229.2| COG0564: Pseudouridylate synthases, 23S RNA-specific [Actinobacillus pleuropneumoniae ... |
| Match: gi|46399630|emb|CAF23079.1| |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 41.18% |
Span: 504bp (63.2%) |
Frame: 2 |
| gi|46399630|emb|CAF23079.1| probable 23S RNA-specific pseudouridine synthase D [Parachlamydia sp. UWE25] >gi|46445989... |
| Match: gi|50812225|ref|NP_389429.2| |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 36.52% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|50812225|ref|NP_389429.2| hypothetical protein BSU15460 [Bacillus subtilis subsp. subtilis str. 168] >gi|32468746|... |
| Match: gi|1373157|gb|AAB57767.1| |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 36.52% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|1373157|gb|AAB57767.1| orf-X; hypothetical protein; Method: conceptual translation supplied by author |
| Match: gi|48765080|ref|ZP_00269631.1| |
score: 106.3 |
e-value: 9.2e-22 |
Identity: 36.31% |
Span: 537bp (67.4%) |
Frame: 2 |
| gi|48765080|ref|ZP_00269631.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Rhodospirillum rubrum] |
| Match: gi|2661852|emb|CAB06297.1| |
score: 105.9 |
e-value: 1.2e-21 |
Identity: 34.44% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|2661852|emb|CAB06297.1| hypothetical protein [Prosthecochloris vibrioformis] >gi|3915406|sp|O50310|YBC5_CHLVI Hypo... |
| Match: gi|23098941|ref|NP_692407.1| |
score: 105.9 |
e-value: 1.2e-21 |
Identity: 37.36% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|23098941|ref|NP_692407.1| hypothetical protein [Oceanobacillus iheyensis HTE831] gi|22777169|dbj|BAC13442.1| hypot... |
| Match: gi|62290527|ref|YP_222320.1| |
score: 105.5 |
e-value: 1.6e-21 |
Identity: 36.47% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|62290527|ref|YP_222320.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Brucella abortus biovar ... |
| Match: gi|61102095|ref|ZP_00377549.1| |
score: 105.5 |
e-value: 1.6e-21 |
Identity: 41.14% |
Span: 474bp (59.5%) |
Frame: 2 |
| gi|61102095|ref|ZP_00377549.1| pseudouridine synthase D large subunit [Erythrobacter litoralis HTCC2594] >gi|60736202... |
| Match: gi|75428799|ref|ZP_00731914.1| |
score: 105.1 |
e-value: 2e-21 |
Identity: 36.22% |
Span: 549bp (68.9%) |
Frame: 2 |
| gi|75428799|ref|ZP_00731914.1| Pseudouridylate synthase [Actinobacillus succinogenes 130Z] >gi|74277473|gb|EAO51048.1... |
| Match: gi|71482197|ref|ZP_00661895.1| |
score: 105.1 |
e-value: 2e-21 |
Identity: 35.29% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|71482197|ref|ZP_00661895.1| Pseudouridine synthase, RluD [Prosthecochloris vibrioformis DSM 265] >gi|71282931|gb|E... |
| Match: gi|59803028|sp|P50513|RLUD_ZYMMO |
score: 104.8 |
e-value: 2.7e-21 |
Identity: 39.41% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|59803028|sp|P50513|RLUD_ZYMMO Ribosomal large subunit pseudouridine synthase D (rRNA-uridine isomerase D) (rRNA ps... |
| Match: gi|1143378|dbj|BAA09443.1| |
score: 104.8 |
e-value: 2.7e-21 |
Identity: 39.41% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|1143378|dbj|BAA09443.1| homologue of E. coli ClpB5' ORF [Zymomonas mobilis] |
| Match: gi|39981955|gb|AAR33417.1| |
score: 104.8 |
e-value: 2.7e-21 |
Identity: 37.64% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|39981955|gb|AAR33417.1| ribosomal large subunit pseudouridine synthase D [Geobacter sulfurreducens PCA] >gi|399951... |
| Match: gi|58038975|ref|YP_190939.1| |
score: 104.8 |
e-value: 2.7e-21 |
Identity: 36.16% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|58038975|ref|YP_190939.1| Ribosomal large subunit pseudouridine synthase D [Gluconobacter oxydans 621H] >gi|580013... |
| Match: gi|46156638|ref|ZP_00132277.2| |
score: 104.4 |
e-value: 3.5e-21 |
Identity: 37.28% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|46156638|ref|ZP_00132277.2| COG0564: Pseudouridylate synthases, 23S RNA-specific [Haemophilus somnus 2336] |
| Match: gi|23466534|ref|ZP_00122122.1| |
score: 104.4 |
e-value: 3.5e-21 |
Identity: 37.28% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|23466534|ref|ZP_00122122.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Haemophilus somnus 129PT] |
| Match: gi|53689611|ref|ZP_00062782.2| |
score: 104.4 |
e-value: 3.5e-21 |
Identity: 35.03% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|53689611|ref|ZP_00062782.2| COG0564: Pseudouridylate synthases, 23S RNA-specific [Leuconostoc mesenteroides subsp.... |
| Match: gi|23015589|ref|ZP_00055361.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 35.23% |
Span: 528bp (66.2%) |
Frame: 2 |
| gi|23015589|ref|ZP_00055361.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Magnetospirillum magnetotacticum] |
| Match: gi|67939026|ref|ZP_00531540.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 32.97% |
Span: 546bp (68.5%) |
Frame: 2 |
| gi|67939026|ref|ZP_00531540.1| Pseudouridine synthase, RluD [Chlorobium phaeobacteroides BS1] >gi|67914757|gb|EAM6409... |
| Match: gi|67919310|ref|ZP_00512892.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 37.65% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|67919310|ref|ZP_00512892.1| Pseudouridine synthase, RluD [Chlorobium limicola DSM 245] >gi|67783084|gb|EAM42481.1|... |
| Match: gi|16803883|ref|NP_465368.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 37.8% |
Span: 492bp (61.7%) |
Frame: 2 |
| gi|16803883|ref|NP_465368.1| similar to conserved hypothetical proteins [Listeria monocytogenes EGD-e] gi|25322406|pi... |
| Match: gi|46908075|ref|YP_014464.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 37.8% |
Span: 492bp (61.7%) |
Frame: 2 |
| gi|46908075|ref|YP_014464.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Listeria monocytogenes s... |
| Match: gi|4980971|gb|AAD35547.1| |
score: 104 |
e-value: 4.5e-21 |
Identity: 35.75% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|4980971|gb|AAD35547.1| conserved hypothetical protein [Thermotoga maritima MSB8] >gi|15643228|ref|NP_228272.1| hyp... |
| Match: gi|68552142|ref|ZP_00591534.1| |
score: 103.6 |
e-value: 5.9e-21 |
Identity: 35.88% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|68552142|ref|ZP_00591534.1| Pseudouridine synthase, RluD [Prosthecochloris aestuarii DSM 271] >gi|68240957|gb|EAN2... |
| Match: gi|56964104|ref|YP_175835.1| |
score: 103.6 |
e-value: 5.9e-21 |
Identity: 41.25% |
Span: 477bp (59.8%) |
Frame: 2 |
| gi|56964104|ref|YP_175835.1| pseudouridine synthase [Bacillus clausii KSM-K16] >gi|56910347|dbj|BAD64874.1| pseudouri... |
| Match: gi|48854010|ref|ZP_00308174.1| |
score: 103.2 |
e-value: 7.8e-21 |
Identity: 39.88% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|48854010|ref|ZP_00308174.1| COG0564: Pseudouridylate synthases, 23S RNA-specific [Cytophaga hutchinsonii] |
| Match: gi|22295263|dbj|BAC09090.1| |
score: 103.2 |
e-value: 7.8e-21 |
Identity: 35.39% |
Span: 534bp (67.0%) |
Frame: 2 |
| gi|22295263|dbj|BAC09090.1| ribosomal large subunit pseudouridine synthase D [Thermosynechococcus elongatus BP-1] >gi... |
| Match: gi|56678029|gb|AAV94695.1| |
score: 103.2 |
e-value: 7.8e-21 |
Identity: 38.37% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|56678029|gb|AAV94695.1| ribosomal large subunit pseudouridine synthase D [Silicibacter pomeroyi DSS-3] >gi|5669629... |
| Match: gi|78367647|ref|ZP_00837912.1| |
score: 103.2 |
e-value: 7.8e-21 |
Identity: 36.09% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|78367647|ref|ZP_00837912.1| Pseudouridine synthase, RluD [Shewanella sp. PV-4] >gi|78360292|gb|EAP02131.1| Pseudou... |
| Match: gi|33860753|ref|NP_892314.1| |
score: 102.8 |
e-value: 1e-20 |
Identity: 34.54% |
Span: 579bp (72.6%) |
Frame: 2 |
| gi|33860753|ref|NP_892314.1| putative pseudouridylate synthase specific to ribosomal large subunit [Prochlorococcus m... |
| Match: gi|42519111|ref|NP_965041.1| |
score: 102.8 |
e-value: 1e-20 |
Identity: 35.43% |
Span: 525bp (65.9%) |
Frame: 2 |
| gi|42519111|ref|NP_965041.1| ribosomal large subunit pseudouridine synthase D [Lactobacillus johnsonii NCC 533] >gi|4... |
| Match: gi|71062425|gb|AAZ21428.1| |
score: 102.8 |
e-value: 1e-20 |
Identity: 33.53% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|71062425|gb|AAZ21428.1| pseudouridylate synthase [Candidatus Pelagibacter ubique HTCC1062] >gi|71083312|ref|YP_266... |
| Match: gi|78712080|gb|ABB49257.1| |
score: 102.8 |
e-value: 1e-20 |
Identity: 38.01% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|78712080|gb|ABB49257.1| Pseudouridine synthase, RluD [Prochlorococcus marinus str. MIT 9312] |
| Match: gi|27467790|ref|NP_764427.1| |
score: 102.4 |
e-value: 1.3e-20 |
Identity: 38.46% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|27467790|ref|NP_764427.1| conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|27315334|gb|AA... |
| Match: gi|21674122|ref|NP_662187.1| |
score: 102.4 |
e-value: 1.3e-20 |
Identity: 35.29% |
Span: 510bp (64.0%) |
Frame: 2 |
| gi|21674122|ref|NP_662187.1| ribosomal large subunit pseudouridine synthase D [Chlorobium tepidum TLS] gi|21647279|gb... |
| Match: gi|15075749|emb|CAC47304.1| |
score: 102.4 |
e-value: 1.3e-20 |
Identity: 35.88% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|15075749|emb|CAC47304.1| PUTATIVE RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE PROTEIN [Sinorhizobium meliloti] ... |
| Match: gi|57866712|ref|YP_188346.1| |
score: 102.1 |
e-value: 1.7e-20 |
Identity: 37.87% |
Span: 507bp (63.6%) |
Frame: 2 |
| gi|57866712|ref|YP_188346.1| ribosomal large subunit pseudouridine synthase, RluD subfamily [Staphylococcus epidermid... |
| Match: gi|16752321|ref|NP_444579.1| |
score: 102.1 |
e-value: 1.7e-20 |
Identity: 40.23% |
Span: 519bp (65.1%) |
Frame: 2 |
| gi|16752321|ref|NP_444579.1| ribosomal large subunit pseudouridine synthase D [Chlamydophila pneumoniae AR39] >gi|158... |
| Match: gi|71545701|ref|ZP_00666616.1| |
score: 102.1 |
e-value: 1.7e-20 |
Identity: 37.08% |
Span: 531bp (66.6%) |
Frame: 2 |
| gi|71545701|ref|ZP_00666616.1| Pseudouridine synthase, RluD [Syntrophobacter fumaroxidans MPOB] >gi|71488463|gb|EAO20... |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
