| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224128974|ref|XP_002320469.1| |
score: 320 |
e-value: 8e-86 |
Identity: 92% |
Span: 525bp (67.0%) |
Frame: 1 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222861242|gb|EEE98784.1| chromatin remodeling complex s... |
| Match: gi|270241594|emb|CBI28814.1| |
score: 318 |
e-value: 5e-85 |
Identity: 90.86% |
Span: 525bp (67.0%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225447045|ref|XP_002269303.1| |
score: 318 |
e-value: 5e-85 |
Identity: 90.86% |
Span: 525bp (67.0%) |
Frame: 1 |
| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-contai... |
| Match: gi|255567695|ref|XP_002524826.1| |
score: 304 |
e-value: 6e-81 |
Identity: 86.29% |
Span: 525bp (67.0%) |
Frame: 1 |
| DNA repair helicase rad5,16, putative [Ricinus communis] >gi223535886|gb|EEF37546.1| DNA repair helicase rad5,16, put... |
| Match: gi|15220993|ref|NP_172004.1| |
score: 300 |
e-value: 1e-79 |
Identity: 84% |
Span: 525bp (67.0%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|222637121|gb|EEE67253.1| |
score: 287 |
e-value: 1e-75 |
Identity: 83.24% |
Span: 519bp (66.2%) |
Frame: 1 |
| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] |
| Match: gi|115472329|ref|NP_001059763.1| |
score: 287 |
e-value: 1e-75 |
Identity: 83.24% |
Span: 519bp (66.2%) |
Frame: 1 |
| Os07g0511500 [Oryza sativa (japonica cultivar-group)] >gi113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonic... |
| Match: gi|50509490|dbj|BAD31171.1| |
score: 287 |
e-value: 1e-75 |
Identity: 83.24% |
Span: 519bp (66.2%) |
Frame: 1 |
| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] |
| Match: gi|242045780|ref|XP_002460761.1| |
score: 280 |
e-value: 9e-74 |
Identity: 80.35% |
Span: 519bp (66.2%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] >gi241924138|gb|EER97282.1| hypothetical protein SORBIDRA... |
| Match: gi|15217826|ref|NP_171767.1| |
score: 258 |
e-value: 5e-67 |
Identity: 74.71% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein, putative [Arabidopsis thaliana] |
| Match: gi|225444469|ref|XP_002267771.1| |
score: 252 |
e-value: 4e-65 |
Identity: 70.52% |
Span: 519bp (66.2%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|9972383|gb|AAG10633.1|AC022521_11 |
score: 242 |
e-value: 3e-62 |
Identity: 78.81% |
Span: 453bp (57.8%) |
Frame: 1 |
| Similar nucleotide excision repair proteins [Arabidopsis thaliana] |
| Match: gi|270234618|emb|CBI23220.1| |
score: 239 |
e-value: 2e-61 |
Identity: 74.83% |
Span: 453bp (57.8%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|262110818|gb|EEY68870.1| |
score: 233 |
e-value: 2e-59 |
Identity: 65.14% |
Span: 525bp (67.0%) |
Frame: 1 |
| DNA repair protein, putative [Phytophthora infestans T30-4] |
| Match: gi|218199702|gb|EEC82129.1| |
score: 223 |
e-value: 1e-56 |
Identity: 68.97% |
Span: 519bp (66.2%) |
Frame: 1 |
| hypothetical protein OsI_26164 [Oryza sativa Indica Group] |
| Match: gi|209878917|ref|XP_002140899.1| |
score: 211 |
e-value: 9e-53 |
Identity: 58.38% |
Span: 519bp (66.2%) |
Frame: 1 |
| SNF2 family N-terminal domain-containing protein [Cryptosporidium muris RN66] >gi209556505|gb|EEA06550.1| SNF2 family... |
| Match: gi|66356890|ref|XP_625623.1| |
score: 206 |
e-value: 2e-51 |
Identity: 57.8% |
Span: 519bp (66.2%) |
Frame: 1 |
| Swi2/Snf2 ATpase,Rad16 ortholog [Cryptosporidium parvum Iowa II] >gi46226722|gb|EAK87701.1| Swi2/Snf2 ATpase,Rad16 or... |
| Match: gi|239904130|gb|EER20385.1| |
score: 203 |
e-value: 2e-50 |
Identity: 58.05% |
Span: 519bp (66.2%) |
Frame: 1 |
| conserved hypothetical protein [Perkinsus marinus ATCC 50983] |
| Match: gi|224001126|ref|XP_002290235.1| |
score: 196 |
e-value: 2e-48 |
Identity: 53.93% |
Span: 516bp (65.8%) |
Frame: 1 |
| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] >gi220973657|gb|EED91987.1| hypothetical p... |
| Match: gi|190408727|gb|EDV11992.1| |
score: 192 |
e-value: 4e-47 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein RAD16 [Saccharomyces cerevisiae RM11-1a] >gi207347673|gb|EDZ73768.1| YBR114Wp-like protein [Saccha... |
| Match: gi|167516624|ref|XP_001742653.1| |
score: 192 |
e-value: 4e-47 |
Identity: 54.34% |
Span: 519bp (66.2%) |
Frame: 1 |
| hypothetical protein [Monosiga brevicollis MX1] >gi163779277|gb|EDQ92891.1| predicted protein [Monosiga brevicollis MX1] |
| Match: gi|151946506|gb|EDN64728.1| |
score: 192 |
e-value: 4e-47 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| radiation sensitive protein [Saccharomyces cerevisiae YJM789] |
| Match: gi|172320|gb|AAA34930.1| |
score: 192 |
e-value: 4e-47 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| excision repair protein [Saccharomyces cerevisiae] |
| Match: gi|6319590|ref|NP_009672.1| |
score: 192 |
e-value: 4e-47 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) during nucleotide excision repa... |
| Match: gi|199424832|emb|CAH02333.2| |
score: 191 |
e-value: 1e-46 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| KLLA0B09240p [Kluyveromyces lactis] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At1G05120.1 |
score: 300 |
e-value: 8e-82 |
Identity: 84% |
Span: 525bp (67.0%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At1G02670.1 |
score: 258 |
e-value: 3e-69 |
Identity: 74.71% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein, putative | chr1:576046-580299 FORWARD |
| Match: At3G20010.1 |
score: 157 |
e-value: 9e-39 |
Identity: 49.68% |
Span: 462bp (58.9%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:6... |
| Match: At5G22750.1 |
score: 155 |
e-value: 3e-38 |
Identity: 46.75% |
Span: 507bp (64.7%) |
Frame: 1 |
| Symbols: RAD5 | RAD5; ATP binding / DNA binding / helicase/ protein binding / zinc ion binding | chr5:7565377-757087... |
| Match: At1G50410.1 |
score: 150 |
e-value: 6e-37 |
Identity: 48.41% |
Span: 462bp (58.9%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At5G43530.1 |
score: 147 |
e-value: 5e-36 |
Identity: 44.97% |
Span: 507bp (64.7%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr5:1... |
| Match: At1G11100.1 |
score: 142 |
e-value: 2e-34 |
Identity: 46.45% |
Span: 453bp (57.8%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:3703934-370... |
| Match: At1G61140.1 |
score: 140 |
e-value: 1e-33 |
Identity: 45.75% |
Span: 453bp (57.8%) |
Frame: 1 |
| Symbols: EDA16 | EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / z... |
| Match: At5G05130.1 |
score: 123 |
e-value: 1e-28 |
Identity: 41.89% |
Span: 435bp (55.5%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr5:1... |
| Match: At2G02090.1 |
score: 103 |
e-value: 1e-22 |
Identity: 42.64% |
Span: 387bp (49.4%) |
Frame: 1 |
| Symbols: ETL1, CHR19 | CHR19/ETL1 (chromatin remodeling 19); ATP binding / DNA binding / helicase | chr2:523480-5268... |
| Match: At5G66750.1 |
score: 100 |
e-value: 1e-21 |
Identity: 38.69% |
Span: 408bp (52.0%) |
Frame: 1 |
| Symbols: SOM4, SOM1, CHR1, DDM1 | DDM1 (DECREASED DNA METHYLATION 1); helicase | chr5:26666276-26670095 FORWARD |
| Match: At3G12810.1 |
score: 100 |
e-value: 1e-21 |
Identity: 36.43% |
Span: 387bp (49.4%) |
Frame: 1 |
| Symbols: SRCAP, CHR13, PIE1 | PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding / helicase... |
| Match: At5G63950.1 |
score: 93.2 |
e-value: 2e-19 |
Identity: 35.81% |
Span: 444bp (56.6%) |
Frame: 1 |
| Symbols: CHR24 | CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase | chr5:25609386-25615631 REVERSE |
| Match: At5G18620.2 |
score: 92 |
e-value: 3e-19 |
Identity: 35.66% |
Span: 384bp (49.0%) |
Frame: 1 |
| Symbols: CHR17 | CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase | chr5:6196192-6202060 REVERSE |
| Match: At5G18620.1 |
score: 92 |
e-value: 3e-19 |
Identity: 35.66% |
Span: 384bp (49.0%) |
Frame: 1 |
| Symbols: CHR17 | CHR17 (CHROMATIN REMODELING FACTOR17); DNA-dependent ATPase | chr5:6196192-6202060 REVERSE |
| Match: At3G06400.1 |
score: 92 |
e-value: 3e-19 |
Identity: 37.69% |
Span: 387bp (49.4%) |
Frame: 1 |
| Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase | chr3:1941072-1946706 FORWARD |
| Match: At3G16600.1 |
score: 92 |
e-value: 3e-19 |
Identity: 55.13% |
Span: 234bp (29.8%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:5... |
| Match: At2G40770.1 |
score: 92 |
e-value: 3e-19 |
Identity: 33.12% |
Span: 429bp (54.7%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger (C3HC4 type RING finger) family pr... |
| Match: At2G44980.1 |
score: 92 |
e-value: 3e-19 |
Identity: 35.62% |
Span: 477bp (60.8%) |
Frame: 1 |
| transcription regulatory protein SNF2, putative | chr2:18559515-18563744 REVERSE |
| Match: At3G57300.1 |
score: 91.3 |
e-value: 6e-19 |
Identity: 34.35% |
Span: 393bp (50.1%) |
Frame: 1 |
| transcriptional activator, putative | chr3:21210591-21218614 FORWARD |
| Match: At5G44800.1 |
score: 90.9 |
e-value: 8e-19 |
Identity: 34.46% |
Span: 438bp (55.9%) |
Frame: 1 |
| Symbols: CHR4, MI-2-LIKE | CHR4/MI-2-LIKE (chromatin remodeling 4); ATP binding / DNA binding / chromatin binding / ... |
| Match: At3G54280.1 |
score: 88.6 |
e-value: 4e-18 |
Identity: 30.13% |
Span: 459bp (58.5%) |
Frame: 1 |
| ATP binding / DNA binding / helicase | chr3:20103339-20114785 FORWARD |
| Match: At2G44980.2 |
score: 87 |
e-value: 1e-17 |
Identity: 32.94% |
Span: 477bp (60.8%) |
Frame: 1 |
| transcription regulatory protein SNF2, putative | chr2:18559418-18563744 REVERSE |
| Match: At5G19310.1 |
score: 86.3 |
e-value: 2e-17 |
Identity: 37.7% |
Span: 363bp (46.3%) |
Frame: 1 |
| homeotic gene regulator, putative | chr5:6498908-6503434 FORWARD |
| Match: At3G06010.1 |
score: 85.1 |
e-value: 4e-17 |
Identity: 37.7% |
Span: 363bp (46.3%) |
Frame: 1 |
| homeotic gene regulator, putative | chr3:1802441-1807290 REVERSE |
|
| 17 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P31244 |
score: 192 |
e-value: 3e-48 |
Identity: 53.76% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein RAD16 OS=Saccharomyces cerevisiae GN=RAD16 PE=1 SV=1 |
| Match: P79051 |
score: 187 |
e-value: 9e-47 |
Identity: 53.18% |
Span: 519bp (66.2%) |
Frame: 1 |
| ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2 |
| Match: P36607 |
score: 156 |
e-value: 2e-37 |
Identity: 44.44% |
Span: 513bp (65.4%) |
Frame: 1 |
| DNA repair protein rad5 OS=Schizosaccharomyces pombe GN=rad8 PE=1 SV=1 |
| Match: Q9FNI6 |
score: 155 |
e-value: 4e-37 |
Identity: 46.75% |
Span: 507bp (64.7%) |
Frame: 1 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arab... |
| Match: Q5KPG8 |
score: 154 |
e-value: 6e-37 |
Identity: 46.29% |
Span: 516bp (65.8%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Cryptococcus neoformans GN=RAD5 PE=3 SV=1 |
| Match: Q4IJ84 |
score: 148 |
e-value: 3e-35 |
Identity: 49.32% |
Span: 444bp (56.6%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Gibberella zeae GN=RAD5 PE=3 SV=1 |
| Match: Q9FIY7 |
score: 147 |
e-value: 6e-35 |
Identity: 44.97% |
Span: 507bp (64.7%) |
Frame: 1 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arab... |
| Match: O60177 |
score: 147 |
e-value: 8e-35 |
Identity: 41.04% |
Span: 516bp (65.8%) |
Frame: 1 |
| Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe GN=SPBC23E6.02 PE=2 SV=1 |
| Match: Q5BHD6 |
score: 140 |
e-value: 1e-32 |
Identity: 40.19% |
Span: 516bp (65.8%) |
Frame: 1 |
| DNA repair protein rad5 OS=Emericella nidulans GN=rad5 PE=3 SV=1 |
| Match: O13762 |
score: 139 |
e-value: 2e-32 |
Identity: 39.66% |
Span: 519bp (66.2%) |
Frame: 1 |
| Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1 |
| Match: Q9UNY4 |
score: 139 |
e-value: 3e-32 |
Identity: 43.27% |
Span: 513bp (65.4%) |
Frame: 1 |
| Transcription termination factor 2 OS=Homo sapiens GN=TTF2 PE=1 SV=2 |
| Match: Q7S1P9 |
score: 136 |
e-value: 2e-31 |
Identity: 46.62% |
Span: 444bp (56.6%) |
Frame: 1 |
| DNA repair protein rad-5 OS=Neurospora crassa GN=rad-5 PE=3 SV=2 |
| Match: Q5NC05 |
score: 135 |
e-value: 3e-31 |
Identity: 42.11% |
Span: 513bp (65.4%) |
Frame: 1 |
| Transcription termination factor 2 OS=Mus musculus GN=Ttf2 PE=1 SV=2 |
| Match: Q4PGG5 |
score: 134 |
e-value: 7e-31 |
Identity: 42.86% |
Span: 453bp (57.8%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Ustilago maydis GN=RAD5 PE=3 SV=1 |
| Match: Q753V5 |
score: 133 |
e-value: 1e-30 |
Identity: 38.98% |
Span: 513bp (65.4%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Ashbya gossypii GN=RAD5 PE=3 SV=1 |
| Match: Q4WVM1 |
score: 133 |
e-value: 2e-30 |
Identity: 39.42% |
Span: 516bp (65.8%) |
Frame: 1 |
| DNA repair protein rad5 OS=Aspergillus fumigatus GN=rad5 PE=3 SV=2 |
| Match: Q5ACX1 |
score: 132 |
e-value: 2e-30 |
Identity: 39.33% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Candida albicans GN=RAD5 PE=3 SV=1 |
| Match: Q14527 |
score: 132 |
e-value: 2e-30 |
Identity: 43.53% |
Span: 504bp (64.3%) |
Frame: 1 |
| Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2 |
| Match: Q6PCN7 |
score: 132 |
e-value: 3e-30 |
Identity: 47.13% |
Span: 465bp (59.3%) |
Frame: 1 |
| Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1 |
| Match: Q6CJM4 |
score: 132 |
e-value: 3e-30 |
Identity: 41.24% |
Span: 513bp (65.4%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Kluyveromyces lactis GN=RAD5 PE=3 SV=1 |
| Match: Q10332 |
score: 131 |
e-value: 4e-30 |
Identity: 42.95% |
Span: 459bp (58.5%) |
Frame: 1 |
| Uncharacterized ATP-dependent helicase C582.10c OS=Schizosaccharomyces pombe GN=SPBC582.10c PE=1 SV=1 |
| Match: P32849 |
score: 131 |
e-value: 6e-30 |
Identity: 37.22% |
Span: 513bp (65.4%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Saccharomyces cerevisiae GN=RAD5 PE=1 SV=1 |
| Match: Q6BIP2 |
score: 130 |
e-value: 1e-29 |
Identity: 37.99% |
Span: 519bp (66.2%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Debaryomyces hansenii GN=RAD5 PE=3 SV=2 |
| Match: Q08562 |
score: 127 |
e-value: 6e-29 |
Identity: 40.57% |
Span: 519bp (66.2%) |
Frame: 1 |
| ATP-dependent helicase ULS1 OS=Saccharomyces cerevisiae GN=ULS1 PE=1 SV=1 |
| Match: Q6C2R8 |
score: 127 |
e-value: 6e-29 |
Identity: 42.04% |
Span: 471bp (60.1%) |
Frame: 1 |
| DNA repair protein RAD5 OS=Yarrowia lipolytica GN=RAD5 PE=3 SV=1 |
|
| 183 lower scoring hits censored -- only 25 best hits are stored. |
