| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|21536939|gb|AAM61280.1| |
score: 177.2 |
e-value: 2.2e-43 |
Identity: 58.43% |
Span: 534bp (68.3%) |
Frame: 3 |
| RNA binding protein-like [Arabidopsis thaliana] |
| Match: gi|15232579|ref|NP_191037.1| |
score: 175.6 |
e-value: 6.5e-43 |
Identity: 57.87% |
Span: 534bp (68.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi7258381|emb|CAB77597.1| RNA binding protein-... |
| Match: gi|27476063|gb|AAO16994.1| |
score: 146.7 |
e-value: 3.2e-34 |
Identity: 46.15% |
Span: 501bp (64.1%) |
Frame: 3 |
| Hypothetical protein [Oryza sativa Japonica Group] >gi125585859|gb|EAZ26523.1| hypothetical protein OsJ_10418 [Oryza ... |
| Match: gi|25518372|pir||B86363 |
score: 143.7 |
e-value: 2.7e-33 |
Identity: 76.47% |
Span: 255bp (32.6%) |
Frame: 3 |
| gi|25518372|pir||B86363 hypothetical protein F19G10.13 - Arabidopsis thaliana gi|2462825|gb|AAB72160.1| contains Proc... |
| Match: gi|18395177|ref|NP_564184.1| |
score: 143.7 |
e-value: 2.7e-33 |
Identity: 76.47% |
Span: 255bp (32.6%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi13605871|gb|AAK32921.1|AF367334_1 At1g22910/... |
| Match: gi|15010636|gb|AAK73977.1| |
score: 142.5 |
e-value: 6.1e-33 |
Identity: 77.38% |
Span: 252bp (32.2%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|23505939|gb|AAN28829.1| |
score: 142.5 |
e-value: 6.1e-33 |
Identity: 77.38% |
Span: 252bp (32.2%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|18394923|ref|NP_564127.1| |
score: 142.5 |
e-value: 6.1e-33 |
Identity: 77.38% |
Span: 252bp (32.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|25518498|pir||D86341 |
score: 142.5 |
e-value: 6.1e-33 |
Identity: 77.38% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|25518498|pir||D86341 hypothetical protein F9H16.14 - Arabidopsis thaliana gi|4836901|gb|AAD30604.1| Unknown protei... |
| Match: gi|25406448|pir||D96792 |
score: 140.6 |
e-value: 2.3e-32 |
Identity: 75% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|25406448|pir||D96792 probable RNA-binding protein, 24808-23340 [imported] - Arabidopsis thaliana gi|6554473|gb|AAF... |
| Match: gi|22330665|ref|NP_565132.2| |
score: 140.6 |
e-value: 2.3e-32 |
Identity: 75% |
Span: 252bp (32.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|34907334|ref|NP_915014.1| |
score: 134 |
e-value: 2.2e-30 |
Identity: 71.43% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|34907334|ref|NP_915014.1| P0698A10.29 [Oryza sativa (japonica cultivar-group)] gi|20804774|dbj|BAB92459.1| P0698A1... |
| Match: gi|34905758|ref|NP_914226.1| |
score: 133.7 |
e-value: 2.8e-30 |
Identity: 73.81% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|34905758|ref|NP_914226.1| similar to RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|20146215|dbj|... |
| Match: gi|15226439|ref|NP_182201.1| |
score: 132.9 |
e-value: 4.8e-30 |
Identity: 65.17% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|15226439|ref|NP_182201.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|7485761|pir||T0... |
| Match: gi|25518109|pir||B86356 |
score: 129.8 |
e-value: 4.1e-29 |
Identity: 63.16% |
Span: 279bp (35.7%) |
Frame: 3 |
| gi|25518109|pir||B86356 T16E15.6 protein - Arabidopsis thaliana gi|9392682|gb|AAF87259.1| Contains similarity to seb4... |
| Match: gi|18395106|ref|NP_564168.1| |
score: 129.8 |
e-value: 4.1e-29 |
Identity: 63.16% |
Span: 279bp (35.7%) |
Frame: 3 |
| gi|18395106|ref|NP_564168.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|21593674|gb|AAM... |
| Match: gi|18411885|ref|NP_565175.1| |
score: 127.1 |
e-value: 2.7e-28 |
Identity: 58.95% |
Span: 285bp (36.4%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21537200|gb|AAM61541.1| RNA recognition moti... |
| Match: gi|25405025|pir||H96811 |
score: 127.1 |
e-value: 2.7e-28 |
Identity: 58.95% |
Span: 285bp (36.4%) |
Frame: 3 |
| gi|25405025|pir||H96811 protein F3F9.20 [imported] - Arabidopsis thaliana gi|8052542|gb|AAF71806.1| F3F9.20 [Arabidop... |
| Match: gi|15217552|ref|NP_174613.1| |
score: 125.6 |
e-value: 7.7e-28 |
Identity: 67.47% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|15217552|ref|NP_174613.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25403191|pir||E... |
| Match: gi|14532532|gb|AAK63994.1| |
score: 125.6 |
e-value: 7.7e-28 |
Identity: 67.47% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|14532532|gb|AAK63994.1| At1g33470/F10C21_14 [Arabidopsis thaliana] gi|18655391|gb|AAL76151.1| At1g33470/F10C21_14 ... |
| Match: gi|28201883|sp|Q9H0Z9|RNP1_HUMAN |
score: 107.5 |
e-value: 2.2e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|28201883|sp|Q9H0Z9|RNP1_HUMAN RNA-binding region containing protein 1 (HSRNASEB) (ssDNA binding protein SEB4) (CLL... |
| Match: gi|13122236|emb|CAC32281.1| |
score: 107.5 |
e-value: 2.2e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|13122236|emb|CAC32281.1| dJ800J21.2.3 (ssDNA binding protein SEB4D (HSRNASEB), isoform 3) [Homo sapiens] |
| Match: gi|34577105|ref|NP_906270.1| |
score: 107.5 |
e-value: 2.2e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|34577105|ref|NP_906270.1| RNA-binding region containing protein 1 isoform b; ssDNA binding protein SEB4; CLL-assoc... |
| Match: gi|34577107|ref|NP_059965.2| |
score: 107.5 |
e-value: 2.2e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|34577107|ref|NP_059965.2| RNA-binding region containing protein 1 isoform a; ssDNA binding protein SEB4; CLL-assoc... |
| Match: gi|38174185|gb|AAH61322.1| |
score: 107.1 |
e-value: 2.8e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|38174185|gb|AAH61322.1| Unknown (protein for MGC:75808) [Silurana tropicalis] |
| Match: gi|8920429|emb|CAB96420.1| |
score: 107.1 |
e-value: 2.8e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|8920429|emb|CAB96420.1| hypothetical protein [Xenopus laevis] gi|27924271|gb|AAH44956.1| MGC52530 protein [Xenopus... |
| Match: gi|38074506|ref|XP_354752.1| |
score: 106.7 |
e-value: 3.7e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|38074506|ref|XP_354752.1| similar to dJ259A10.1 (ssDNA binding protein (SEB4D)) [Mus musculus] |
| Match: gi|34860882|ref|XP_345478.1| |
score: 106.7 |
e-value: 3.7e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|34860882|ref|XP_345478.1| similar to SEB4 [Rattus norvegicus] |
| Match: gi|9507075|ref|NP_062420.1| |
score: 106.7 |
e-value: 3.7e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|9507075|ref|NP_062420.1| seb4 mRNA; seb4 protein; seb4-like (Xenopus laevis) [Mus musculus] gi|28201881|sp|Q62176|... |
| Match: gi|27683811|ref|XP_214446.1| |
score: 106.7 |
e-value: 3.7e-22 |
Identity: 53.93% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|27683811|ref|XP_214446.1| similar to dJ259A10.1 (ssDNA binding protein (SEB4D)) [Rattus norvegicus] |
| Match: gi|35902819|ref|NP_919356.1| |
score: 105.9 |
e-value: 6.3e-22 |
Identity: 55.95% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|35902819|ref|NP_919356.1| RNA-binding region containing protein 1 [Danio rerio] gi|31580878|dbj|BAC77543.1| hypoth... |
| Match: gi|13624461|emb|CAC36889.1| |
score: 105.1 |
e-value: 1.1e-21 |
Identity: 52.81% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|13624461|emb|CAC36889.1| dJ259A10.1 (ssDNA binding protein (SEB4D)) [Homo sapiens] |
| Match: gi|21754197|dbj|BAC04474.1| |
score: 105.1 |
e-value: 1.1e-21 |
Identity: 52.81% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|21754197|dbj|BAC04474.1| unnamed protein product [Homo sapiens] |
| Match: gi|17569937|ref|NP_508674.1| |
score: 105.1 |
e-value: 1.1e-21 |
Identity: 57.14% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|17569937|ref|NP_508674.1| RNA recognition motif -containing protein (26.8 kD) (XE525) [Caenorhabditis elegans] gi|... |
| Match: gi|31240329|ref|XP_320578.1| |
score: 104.8 |
e-value: 1.4e-21 |
Identity: 51.58% |
Span: 285bp (36.4%) |
Frame: 3 |
| gi|31240329|ref|XP_320578.1| ENSANGP00000015329 [Anopheles gambiae] gi|21287926|gb|EAA00247.1| ENSANGP00000015329 [An... |
| Match: gi|15238805|ref|NP_200179.1| |
score: 104.4 |
e-value: 1.8e-21 |
Identity: 52.22% |
Span: 270bp (34.5%) |
Frame: 3 |
| gi|15238805|ref|NP_200179.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|9759062|dbj|BAB... |
| Match: gi|31087962|gb|AAP42281.1| |
score: 103.6 |
e-value: 3.1e-21 |
Identity: 52.81% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|31087962|gb|AAP42281.1| RRM-type RNA-binding protein XSEB4R [Xenopus laevis] |
| Match: gi|407421|emb|CAA53064.1| |
score: 103.2 |
e-value: 4.1e-21 |
Identity: 55.42% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|407421|emb|CAA53064.1| SEB4B [Homo sapiens] |
| Match: gi|407419|emb|CAA53063.1| |
score: 103.2 |
e-value: 4.1e-21 |
Identity: 55.42% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|407419|emb|CAA53063.1| SEB4D [Homo sapiens] |
| Match: gi|481241|pir||S38383 |
score: 103.2 |
e-value: 4.1e-21 |
Identity: 55.42% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|481241|pir||S38383 SEB4B protein - human (fragment) |
| Match: gi|481240|pir||S38382 |
score: 103.2 |
e-value: 4.1e-21 |
Identity: 55.42% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|481240|pir||S38382 SEB4D protein - human (fragment) |
| Match: gi|8895698|gb|AAF81070.1| |
score: 102.8 |
e-value: 5.4e-21 |
Identity: 52.81% |
Span: 267bp (34.1%) |
Frame: 3 |
| gi|8895698|gb|AAF81070.1| RRM-containing protein SEB-4 [Xenopus laevis] |
| Match: gi|15231350|ref|NP_187353.1| |
score: 96.67 |
e-value: 3.8e-19 |
Identity: 43.96% |
Span: 273bp (34.9%) |
Frame: 3 |
| gi|15231350|ref|NP_187353.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|6729004|gb|AAF2... |
| Match: gi|15238826|ref|NP_200183.1| |
score: 87.43 |
e-value: 2.3e-16 |
Identity: 48.75% |
Span: 240bp (30.7%) |
Frame: 3 |
| gi|15238826|ref|NP_200183.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|9759066|dbj|BAB... |
| Match: gi|34912640|ref|NP_917667.1| |
score: 85.5 |
e-value: 8.9e-16 |
Identity: 50% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|34912640|ref|NP_917667.1| P0410E01.24 [Oryza sativa (japonica cultivar-group)] gi|11034579|dbj|BAB17103.1| P0410E0... |
| Match: gi|18399877|ref|NP_565525.1| |
score: 79.72 |
e-value: 4.9e-14 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana] >gi17380804|gb|AAL36089.1| putative RNA-binding protein [A... |
| Match: gi|30681615|ref|NP_850021.1| |
score: 79.72 |
e-value: 4.9e-14 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana] |
| Match: gi|21595502|gb|AAM66107.1| |
score: 79.72 |
e-value: 4.9e-14 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|19574236|emb|CAD28134.1| |
score: 79.34 |
e-value: 6.4e-14 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| UBP1 interacting protein 1a [Arabidopsis thaliana] |
| Match: gi|31241405|ref|XP_321133.1| |
score: 77.03 |
e-value: 3.2e-13 |
Identity: 42.67% |
Span: 225bp (28.8%) |
Frame: 3 |
| gi|31241405|ref|XP_321133.1| ENSANGP00000018356 [Anopheles gambiae] gi|21288679|gb|EAA00972.1| ENSANGP00000018356 [An... |
| Match: gi|7487039|pir||T08931 |
score: 76.64 |
e-value: 4.1e-13 |
Identity: 44.16% |
Span: 231bp (29.5%) |
Frame: 3 |
| gi|7487039|pir||T08931 hypothetical protein T15N24.100 - Arabidopsis thaliana gi|4938503|emb|CAB43861.1| hnRNP-like p... |
| Match: gi|18416794|ref|NP_567753.1| |
score: 76.64 |
e-value: 4.1e-13 |
Identity: 44.16% |
Span: 231bp (29.5%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi16930503|gb|AAL31937.1|AF419605_1 AT4g26650/... |
| Match: gi|6911144|gb|AAF31403.1| |
score: 75.87 |
e-value: 7e-13 |
Identity: 48.68% |
Span: 225bp (28.8%) |
Frame: 3 |
| gi|6911144|gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Catharanthus roseus] |
| Match: gi|21483526|gb|AAM52738.1| |
score: 75.87 |
e-value: 7e-13 |
Identity: 41.33% |
Span: 225bp (28.8%) |
Frame: 3 |
| gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster] |
| Match: gi|9588102|dbj|BAB03468.1| |
score: 75.1 |
e-value: 1.2e-12 |
Identity: 42.65% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus] |
| Match: gi|9588098|dbj|BAB03466.1| |
score: 75.1 |
e-value: 1.2e-12 |
Identity: 42.65% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus] |
| Match: gi|9588100|dbj|BAB03467.1| |
score: 75.1 |
e-value: 1.2e-12 |
Identity: 42.65% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus] |
| Match: gi|13242324|ref|NP_077380.1| |
score: 75.1 |
e-value: 1.2e-12 |
Identity: 42.65% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|13242324|ref|NP_077380.1| RNA binding protein p45AUF1 [Rattus norvegicus] gi|13124487|sp|Q9JJ54|ROD_RAT Heterogene... |
| Match: gi|6911142|gb|AAF31402.1| |
score: 73.94 |
e-value: 2.7e-12 |
Identity: 47.37% |
Span: 225bp (28.8%) |
Frame: 3 |
| putative glycine-rich RNA binding protein 1 [Catharanthus roseus] |
| Match: gi|870747|dbj|BAA09524.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|29145079|gb|AAH49098.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|29145079|gb|AAH49098.1| Hnrpd protein [Mus musculus] |
| Match: gi|14110420|ref|NP_112738.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D isoform a; AU-rich element RNA-binding protein... |
| Match: gi|2773158|gb|AAB96683.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens] |
| Match: gi|1082775|pir||A54601 |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|1082775|pir||A54601 RNA-binding protein AUF1 - human |
| Match: gi|21666573|gb|AAM73765.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 39.29% |
Span: 252bp (32.2%) |
Frame: 3 |
| gi|21666573|gb|AAM73765.1| RNA-binding protein AKIP1 [Vicia faba] |
| Match: gi|433344|gb|AAC50056.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|433344|gb|AAC50056.1| p37 AUF1 |
| Match: gi|3747052|gb|AAC77437.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus] |
| Match: gi|2137113|pir||I49069 |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|2137113|pir||I49069 A+U-rich RNA-binding protein - mouse (fragment) gi|508268|gb|AAA64653.1| A+U-rich RNA-binding ... |
| Match: gi|870743|dbj|BAA09522.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|181914|gb|AAA35781.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|181914|gb|AAA35781.1| DNA-binding protein |
| Match: gi|420052|pir||A44192 |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|420052|pir||A44192 heterogeneous nuclear ribonucleoprotein C-like protein - human |
| Match: gi|27694771|gb|AAH43814.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 47.06% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis] |
| Match: gi|14110414|ref|NP_002129.2| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D isoform c; AU-rich element RNA-binding protein... |
| Match: gi|6671602|ref|NP_031542.1| |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|6671602|ref|NP_031542.1| heterogeneous nuclear ribonucleoprotein D; AU-rich element RNA-binding protein 1 [Mus mus... |
| Match: gi|33516945|sp|Q60668|ROD_MOUSE |
score: 73.56 |
e-value: 3.5e-12 |
Identity: 41.18% |
Span: 204bp (26.1%) |
Frame: 3 |
| gi|33516945|sp|Q60668|ROD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding pr... |
| Match: gi|21483526|gb|AAM52738.1| |
score: 64.7 |
e-value: 1.6e-09 |
Identity: 39.24% |
Span: 237bp (30.3%) |
Frame: 3 |
| gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster] |
| Match: gi|34912640|ref|NP_917667.1| |
score: 60.85 |
e-value: 2.3e-08 |
Identity: 34.94% |
Span: 249bp (31.8%) |
Frame: 3 |
| gi|34912640|ref|NP_917667.1| P0410E01.24 [Oryza sativa (japonica cultivar-group)] gi|11034579|dbj|BAB17103.1| P0410E0... |
| Match: gi|6671602|ref|NP_031542.1| |
score: 56.61 |
e-value: 4.4e-07 |
Identity: 40.68% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|6671602|ref|NP_031542.1| heterogeneous nuclear ribonucleoprotein D; AU-rich element RNA-binding protein 1 [Mus mus... |
| Match: gi|870743|dbj|BAA09522.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|13242324|ref|NP_077380.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|13242324|ref|NP_077380.1| RNA binding protein p45AUF1 [Rattus norvegicus] gi|13124487|sp|Q9JJ54|ROD_RAT Heterogene... |
| Match: gi|9588100|dbj|BAB03467.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus] |
| Match: gi|9588102|dbj|BAB03468.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus] |
| Match: gi|9588098|dbj|BAB03466.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus] |
| Match: gi|870747|dbj|BAA09524.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|14110420|ref|NP_112738.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D isoform a; AU-rich element RNA-binding protein... |
| Match: gi|33516945|sp|Q60668|ROD_MOUSE |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|33516945|sp|Q60668|ROD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding pr... |
| Match: gi|2773158|gb|AAB96683.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens] |
| Match: gi|1082775|pir||A54601 |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|1082775|pir||A54601 RNA-binding protein AUF1 - human |
| Match: gi|433344|gb|AAC50056.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|433344|gb|AAC50056.1| p37 AUF1 |
| Match: gi|14110414|ref|NP_002129.2| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D isoform c; AU-rich element RNA-binding protein... |
| Match: gi|29145079|gb|AAH49098.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|29145079|gb|AAH49098.1| Hnrpd protein [Mus musculus] |
| Match: gi|18416794|ref|NP_567753.1| |
score: 53.91 |
e-value: 2.9e-06 |
Identity: 34.21% |
Span: 228bp (29.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi16930503|gb|AAL31937.1|AF419605_1 AT4g26650/... |
| Match: gi|7487039|pir||T08931 |
score: 53.91 |
e-value: 2.9e-06 |
Identity: 34.21% |
Span: 228bp (29.2%) |
Frame: 3 |
| gi|7487039|pir||T08931 hypothetical protein T15N24.100 - Arabidopsis thaliana gi|4938503|emb|CAB43861.1| hnRNP-like p... |
| Match: gi|3747052|gb|AAC77437.1| |
score: 53.53 |
e-value: 3.7e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus] |
| Match: gi|420052|pir||A44192 |
score: 53.14 |
e-value: 4.9e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|420052|pir||A44192 heterogeneous nuclear ribonucleoprotein C-like protein - human |
| Match: gi|181914|gb|AAA35781.1| |
score: 53.14 |
e-value: 4.9e-06 |
Identity: 38.98% |
Span: 177bp (22.6%) |
Frame: 3 |
| gi|181914|gb|AAA35781.1| DNA-binding protein |
| Match: gi|27694771|gb|AAH43814.1| |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 29.87% |
Span: 231bp (29.5%) |
Frame: 3 |
| gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis] |
| Match: gi|31241405|ref|XP_321133.1| |
score: 49.68 |
e-value: 5.4e-05 |
Identity: 30.67% |
Span: 225bp (28.8%) |
Frame: 3 |
| gi|31241405|ref|XP_321133.1| ENSANGP00000018356 [Anopheles gambiae] gi|21288679|gb|EAA00972.1| ENSANGP00000018356 [An... |
| Match: gi|21666573|gb|AAM73765.1| |
score: 46.21 |
e-value: 0.0006 |
Identity: 28.21% |
Span: 234bp (29.9%) |
Frame: 3 |
| gi|21666573|gb|AAM73765.1| RNA-binding protein AKIP1 [Vicia faba] |
| Match: gi|2137113|pir||I49069 |
score: 39.28 |
e-value: 0.073 |
Identity: 34.88% |
Span: 129bp (16.5%) |
Frame: 3 |
| gi|2137113|pir||I49069 A+U-rich RNA-binding protein - mouse (fragment) gi|508268|gb|AAA64653.1| A+U-rich RNA-binding ... |
|
| 268 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At3g54770.1 |
score: 175.6 |
e-value: 2.3e-44 |
Identity: 57.87% |
Span: 534bp (68.3%) |
Frame: 3 |
| At3g54770.1 68410.m05605 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At1g22910.1 |
score: 143.7 |
e-value: 9.5e-35 |
Identity: 76.47% |
Span: 255bp (32.6%) |
Frame: 3 |
| At1g22910.1 68408.m02591 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g20880.1 |
score: 142.5 |
e-value: 2.1e-34 |
Identity: 77.38% |
Span: 252bp (32.2%) |
Frame: 3 |
| At1g20880.1 68408.m02361 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At1g76460.1 |
score: 140.6 |
e-value: 8e-34 |
Identity: 75% |
Span: 252bp (32.2%) |
Frame: 3 |
| At1g76460.1 68408.m08164 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At2g46780.1 |
score: 132.9 |
e-value: 1.7e-31 |
Identity: 65.17% |
Span: 267bp (34.1%) |
Frame: 3 |
| At2g46780.1 68409.m05273 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g22330.1 |
score: 129.8 |
e-value: 1.4e-30 |
Identity: 63.16% |
Span: 279bp (35.7%) |
Frame: 3 |
| At1g22330.1 68408.m02526 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g78260.1 |
score: 127.1 |
e-value: 9.2e-30 |
Identity: 58.95% |
Span: 285bp (36.4%) |
Frame: 3 |
| At1g78260.1 68408.m08366 RNA recognition motif (RRM) - containing protein similar to RNA recognition motif-containing... |
| Match: At1g33470.1 |
score: 125.6 |
e-value: 2.7e-29 |
Identity: 67.47% |
Span: 249bp (31.8%) |
Frame: 3 |
| At1g33470.1 68408.m03752 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At5g53680.1 |
score: 104.4 |
e-value: 6.4e-23 |
Identity: 52.22% |
Span: 270bp (34.5%) |
Frame: 3 |
| At5g53680.1 68412.m06033 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At3g06970.1 |
score: 96.67 |
e-value: 1.3e-20 |
Identity: 43.96% |
Span: 273bp (34.9%) |
Frame: 3 |
| At3g06970.1 68410.m00752 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At5g53720.1 |
score: 87.43 |
e-value: 8.1e-18 |
Identity: 48.75% |
Span: 240bp (30.7%) |
Frame: 3 |
| At5g53720.1 68412.m06041 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g22090.2 |
score: 79.72 |
e-value: 1.7e-15 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| At2g22090.2 68409.m02378 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At2g22090.1 |
score: 79.72 |
e-value: 1.7e-15 |
Identity: 45.78% |
Span: 249bp (31.8%) |
Frame: 3 |
| At2g22090.1 68409.m02377 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At4g26650.1 |
score: 76.64 |
e-value: 1.4e-14 |
Identity: 44.16% |
Span: 231bp (29.5%) |
Frame: 3 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g55550.2 |
score: 72.79 |
e-value: 2.1e-13 |
Identity: 38.75% |
Span: 240bp (30.7%) |
Frame: 3 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.1 |
score: 72.79 |
e-value: 2.1e-13 |
Identity: 38.75% |
Span: 240bp (30.7%) |
Frame: 3 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g15010.1 |
score: 72.79 |
e-value: 2.1e-13 |
Identity: 43.37% |
Span: 249bp (31.8%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At3g23830.1 |
score: 72.02 |
e-value: 3.5e-13 |
Identity: 42.31% |
Span: 231bp (29.5%) |
Frame: 3 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.2 |
score: 72.02 |
e-value: 3.5e-13 |
Identity: 42.31% |
Span: 231bp (29.5%) |
Frame: 3 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At2g21660.1 |
score: 71.63 |
e-value: 4.6e-13 |
Identity: 50% |
Span: 204bp (26.1%) |
Frame: 3 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.2 |
score: 71.63 |
e-value: 4.6e-13 |
Identity: 50% |
Span: 204bp (26.1%) |
Frame: 3 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At1g74230.1 |
score: 71.25 |
e-value: 6e-13 |
Identity: 36.46% |
Span: 288bp (36.8%) |
Frame: 3 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At4g14300.1 |
score: 71.25 |
e-value: 6e-13 |
Identity: 49.09% |
Span: 165bp (21.1%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g56860.1 |
score: 70.86 |
e-value: 7.8e-13 |
Identity: 39.76% |
Span: 249bp (31.8%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At1g17640.1 |
score: 70.86 |
e-value: 7.8e-13 |
Identity: 40% |
Span: 210bp (26.9%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g56860.3 |
score: 70.86 |
e-value: 7.8e-13 |
Identity: 39.76% |
Span: 249bp (31.8%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 70.86 |
e-value: 7.8e-13 |
Identity: 39.76% |
Span: 249bp (31.8%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At2g19380.1 |
score: 70.09 |
e-value: 1.3e-12 |
Identity: 41.98% |
Span: 243bp (31.1%) |
Frame: 3 |
| At2g19380.1 68409.m02052 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At2g41060.1 |
score: 70.09 |
e-value: 1.3e-12 |
Identity: 38.55% |
Span: 249bp (31.8%) |
Frame: 3 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At3g07810.1 |
score: 69.71 |
e-value: 1.7e-12 |
Identity: 47.27% |
Span: 165bp (21.1%) |
Frame: 3 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.2 |
score: 69.71 |
e-value: 1.7e-12 |
Identity: 47.27% |
Span: 165bp (21.1%) |
Frame: 3 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At4g39260.3 |
score: 69.32 |
e-value: 2.3e-12 |
Identity: 47.06% |
Span: 204bp (26.1%) |
Frame: 3 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 69.32 |
e-value: 2.3e-12 |
Identity: 47.06% |
Span: 204bp (26.1%) |
Frame: 3 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.2 |
score: 69.32 |
e-value: 2.3e-12 |
Identity: 47.06% |
Span: 204bp (26.1%) |
Frame: 3 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g26420.1 |
score: 68.94 |
e-value: 3e-12 |
Identity: 43.28% |
Span: 201bp (25.7%) |
Frame: 3 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At5g47620.1 |
score: 68.94 |
e-value: 3e-12 |
Identity: 44.64% |
Span: 168bp (21.5%) |
Frame: 3 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.2 |
score: 68.94 |
e-value: 3e-12 |
Identity: 44.64% |
Span: 168bp (21.5%) |
Frame: 3 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g39260.4 |
score: 68.55 |
e-value: 3.9e-12 |
Identity: 47.76% |
Span: 201bp (25.7%) |
Frame: 3 |
| At4g39260.4 68411.m05439 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g15010.1 |
score: 68.17 |
e-value: 5.1e-12 |
Identity: 33.33% |
Span: 252bp (32.2%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At3g13224.2 |
score: 67.4 |
e-value: 8.7e-12 |
Identity: 43.48% |
Span: 207bp (26.5%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.1 |
score: 67.4 |
e-value: 8.7e-12 |
Identity: 43.48% |
Span: 207bp (26.5%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g40490.1 |
score: 67.01 |
e-value: 1.1e-11 |
Identity: 42.67% |
Span: 225bp (28.8%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At2g22100.1 |
score: 66.63 |
e-value: 1.5e-11 |
Identity: 38.96% |
Span: 231bp (29.5%) |
Frame: 3 |
| At2g22100.1 68409.m02379 RRM-containing RNA-binding protein |
| Match: At4g13850.2 |
score: 66.24 |
e-value: 1.9e-11 |
Identity: 39.74% |
Span: 231bp (29.5%) |
Frame: 3 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g13850.1 |
score: 66.24 |
e-value: 1.9e-11 |
Identity: 39.74% |
Span: 231bp (29.5%) |
Frame: 3 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At1g58470.1 |
score: 66.24 |
e-value: 1.9e-11 |
Identity: 48.33% |
Span: 180bp (23.0%) |
Frame: 3 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At5g61030.1 |
score: 64.7 |
e-value: 5.6e-11 |
Identity: 41.67% |
Span: 180bp (23.0%) |
Frame: 3 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At2g16260.1 |
score: 64.7 |
e-value: 5.6e-11 |
Identity: 45.76% |
Span: 177bp (22.6%) |
Frame: 3 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At5g06210.1 |
score: 64.31 |
e-value: 7.3e-11 |
Identity: 41.67% |
Span: 216bp (27.6%) |
Frame: 3 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At2g33410.1 |
score: 63.16 |
e-value: 1.6e-10 |
Identity: 34.85% |
Span: 198bp (25.3%) |
Frame: 3 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At4g36960.1 |
score: 60.85 |
e-value: 8.1e-10 |
Identity: 40.35% |
Span: 171bp (21.9%) |
Frame: 3 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At1g60650.1 |
score: 60.46 |
e-value: 1.1e-09 |
Identity: 34.62% |
Span: 234bp (29.9%) |
Frame: 3 |
| At1g60650.1 68408.m08723 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At1g60650.2 |
score: 60.46 |
e-value: 1.1e-09 |
Identity: 34.62% |
Span: 234bp (29.9%) |
Frame: 3 |
| At1g60650.2 68408.m08724 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At4g13860.1 |
score: 60.08 |
e-value: 1.4e-09 |
Identity: 35% |
Span: 237bp (30.3%) |
Frame: 3 |
| At4g13860.1 68411.m01943 RNA recognition motif (RRM) - containing protein similar to glycine-rich RNA binding protein... |
| Match: At1g18630.1 |
score: 58.92 |
e-value: 3.1e-09 |
Identity: 43.55% |
Span: 186bp (23.8%) |
Frame: 3 |
| At1g18630.1 68408.m02096 glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from ... |
| Match: At3g08000.1 |
score: 58.54 |
e-value: 4e-09 |
Identity: 42.86% |
Span: 180bp (23.0%) |
Frame: 3 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At5g47320.1 |
score: 57.77 |
e-value: 6.9e-09 |
Identity: 37.5% |
Span: 216bp (27.6%) |
Frame: 3 |
| At5g47320.1 68412.m05259 40S ribosomal protein S19, mitochondrial precursor |
| Match: At3g52380.1 |
score: 57 |
e-value: 1.2e-08 |
Identity: 35.06% |
Span: 228bp (29.2%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At1g17640.1 |
score: 56.22 |
e-value: 2e-08 |
Identity: 45% |
Span: 180bp (23.0%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g37510.1 |
score: 55.45 |
e-value: 3.4e-08 |
Identity: 41.67% |
Span: 180bp (23.0%) |
Frame: 3 |
| At2g37510.1 68409.m04161 RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-i... |
| Match: At5g04280.1 |
score: 55.07 |
e-value: 4.4e-08 |
Identity: 36.23% |
Span: 207bp (26.5%) |
Frame: 3 |
| At5g04280.1 68412.m00390 glycine-rich RNA-binding protein |
| Match: At4g24770.1 |
score: 54.68 |
e-value: 5.8e-08 |
Identity: 36.84% |
Span: 171bp (21.9%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At5g47620.1 |
score: 54.3 |
e-value: 7.6e-08 |
Identity: 30.86% |
Span: 243bp (31.1%) |
Frame: 3 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.2 |
score: 54.3 |
e-value: 7.6e-08 |
Identity: 30.86% |
Span: 243bp (31.1%) |
Frame: 3 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g60000.1 |
score: 54.3 |
e-value: 7.6e-08 |
Identity: 35.63% |
Span: 258bp (33.0%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At4g26650.1 |
score: 53.91 |
e-value: 9.9e-08 |
Identity: 34.21% |
Span: 228bp (29.2%) |
Frame: 3 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g53460.1 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 36.51% |
Span: 189bp (24.2%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At5g55550.1 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 33.82% |
Span: 204bp (26.1%) |
Frame: 3 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.2 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 33.82% |
Span: 204bp (26.1%) |
Frame: 3 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At1g58470.1 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 38.18% |
Span: 165bp (21.1%) |
Frame: 3 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At4g00830.1 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 33.77% |
Span: 228bp (29.2%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At3g53460.2 |
score: 53.14 |
e-value: 1.7e-07 |
Identity: 36.51% |
Span: 189bp (24.2%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g34110.1 |
score: 52.76 |
e-value: 2.2e-07 |
Identity: 39.73% |
Span: 219bp (28.0%) |
Frame: 3 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At3g13224.2 |
score: 52.76 |
e-value: 2.2e-07 |
Identity: 39.34% |
Span: 183bp (23.4%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.1 |
score: 52.76 |
e-value: 2.2e-07 |
Identity: 39.34% |
Span: 183bp (23.4%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g41060.1 |
score: 52.76 |
e-value: 2.2e-07 |
Identity: 32.05% |
Span: 234bp (29.9%) |
Frame: 3 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g54080.1 |
score: 52.37 |
e-value: 2.9e-07 |
Identity: 32.91% |
Span: 234bp (29.9%) |
Frame: 3 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g20930.1 |
score: 52.37 |
e-value: 2.9e-07 |
Identity: 36.76% |
Span: 201bp (25.7%) |
Frame: 3 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At2g37220.1 |
score: 52.37 |
e-value: 2.9e-07 |
Identity: 38.6% |
Span: 171bp (21.9%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g56860.1 |
score: 51.99 |
e-value: 3.8e-07 |
Identity: 32.94% |
Span: 255bp (32.6%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.3 |
score: 51.99 |
e-value: 3.8e-07 |
Identity: 32.94% |
Span: 255bp (32.6%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At5g19960.1 |
score: 51.99 |
e-value: 3.8e-07 |
Identity: 41.1% |
Span: 216bp (27.6%) |
Frame: 3 |
| At5g19960.1 68412.m02178 RNA recognition motif (RRM) - containing protein low similarity to glycine-rich RNA-binding ... |
| Match: At3g56860.2 |
score: 51.99 |
e-value: 3.8e-07 |
Identity: 32.94% |
Span: 255bp (32.6%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At2g27330.1 |
score: 51.6 |
e-value: 4.9e-07 |
Identity: 35.29% |
Span: 201bp (25.7%) |
Frame: 3 |
| At2g27330.1 68409.m02980 RRM-containing protein |
| Match: At1g01080.1 |
score: 51.6 |
e-value: 4.9e-07 |
Identity: 33.33% |
Span: 207bp (26.5%) |
Frame: 3 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At5g50250.1 |
score: 51.22 |
e-value: 6.4e-07 |
Identity: 35.06% |
Span: 228bp (29.2%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At2g33410.1 |
score: 51.22 |
e-value: 6.4e-07 |
Identity: 29.07% |
Span: 258bp (33.0%) |
Frame: 3 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g54580.1 |
score: 50.83 |
e-value: 8.4e-07 |
Identity: 35.09% |
Span: 171bp (21.9%) |
Frame: 3 |
| At5g54580.1 68412.m06145 RNA recognition motif (RRM) - containing protein low similarity to RNA-binding protein RGP-3... |
| Match: At5g40490.1 |
score: 49.68 |
e-value: 1.9e-06 |
Identity: 38.6% |
Span: 171bp (21.9%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At3g07810.2 |
score: 49.29 |
e-value: 2.4e-06 |
Identity: 29.27% |
Span: 246bp (31.5%) |
Frame: 3 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 49.29 |
e-value: 2.4e-06 |
Identity: 29.27% |
Span: 246bp (31.5%) |
Frame: 3 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At5g50250.1 |
score: 48.52 |
e-value: 4.2e-06 |
Identity: 31.58% |
Span: 171bp (21.9%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At4g14300.1 |
score: 48.14 |
e-value: 5.4e-06 |
Identity: 40.74% |
Span: 162bp (20.7%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g53460.1 |
score: 47.37 |
e-value: 9.3e-06 |
Identity: 35.59% |
Span: 177bp (22.6%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.2 |
score: 47.37 |
e-value: 9.3e-06 |
Identity: 35.59% |
Span: 177bp (22.6%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g24770.1 |
score: 47.37 |
e-value: 9.3e-06 |
Identity: 33.77% |
Span: 228bp (29.2%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g52380.1 |
score: 46.98 |
e-value: 1.2e-05 |
Identity: 33.9% |
Span: 177bp (22.6%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At2g37220.1 |
score: 46.21 |
e-value: 2.1e-05 |
Identity: 33.9% |
Span: 177bp (22.6%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At4g36960.1 |
score: 44.28 |
e-value: 7.9e-05 |
Identity: 29.03% |
Span: 186bp (23.8%) |
Frame: 3 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At4g36960.1 |
score: 40.82 |
e-value: 0.00087 |
Identity: 36% |
Span: 150bp (19.2%) |
Frame: 3 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
|
| 101 lower scoring hits censored -- only 100 best hits are stored. |
