| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|225436884|ref|XP_002271258.1| |
score: 334 |
e-value: 7e-90 |
Identity: 75.56% |
Span: 669bp (86.8%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270244940|emb|CBI32318.1| |
score: 325 |
e-value: 3e-87 |
Identity: 73.99% |
Span: 669bp (86.8%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|217074186|gb|ACJ85453.1| |
score: 310 |
e-value: 8e-83 |
Identity: 68.75% |
Span: 669bp (86.8%) |
Frame: 1 |
| unknown [Medicago truncatula] |
| Match: gi|255567640|ref|XP_002524799.1| |
score: 301 |
e-value: 5e-80 |
Identity: 68.16% |
Span: 669bp (86.8%) |
Frame: 1 |
| rrp4, putative [Ricinus communis] >gi223535983|gb|EEF37642.1| rrp4, putative [Ricinus communis] |
| Match: gi|242074666|ref|XP_002447269.1| |
score: 297 |
e-value: 9e-79 |
Identity: 69.59% |
Span: 651bp (84.4%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_06g031660 [Sorghum bicolor] >gi241938452|gb|EES11597.1| hypothetical protein SORBIDRA... |
| Match: gi|224072941|ref|XP_002303939.1| |
score: 297 |
e-value: 9e-79 |
Identity: 67.26% |
Span: 669bp (86.8%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222841371|gb|EEE78918.1| predicted protein [Populus trichocarpa] |
| Match: gi|115459464|ref|NP_001053332.1| |
score: 297 |
e-value: 9e-79 |
Identity: 70.05% |
Span: 651bp (84.4%) |
Frame: 1 |
| Os04g0520000 [Oryza sativa (japonica cultivar-group)] >gi21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza sativa (japo... |
| Match: gi|15218790|ref|NP_171835.1| |
score: 296 |
e-value: 2e-78 |
Identity: 65.74% |
Span: 648bp (84.0%) |
Frame: 1 |
| ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease [Arabidopsis thaliana] >gi3850568... |
| Match: gi|194704246|gb|ACF86207.1| |
score: 295 |
e-value: 4e-78 |
Identity: 68.66% |
Span: 651bp (84.4%) |
Frame: 1 |
| unknown [Zea mays] |
| Match: gi|222619320|gb|EEE55452.1| |
score: 292 |
e-value: 2e-77 |
Identity: 70.75% |
Span: 636bp (82.5%) |
Frame: 1 |
| hypothetical protein OsJ_03610 [Oryza sativa Japonica Group] |
| Match: gi|294462385|gb|ADE76741.1| |
score: 269 |
e-value: 3e-70 |
Identity: 61.47% |
Span: 648bp (84.0%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|294460073|gb|ADE75619.1| |
score: 269 |
e-value: 3e-70 |
Identity: 61.47% |
Span: 648bp (84.0%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|255637128|gb|ACU18895.1| |
score: 263 |
e-value: 1e-68 |
Identity: 68.02% |
Span: 588bp (76.3%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|124359809|gb|ABN06127.1| |
score: 219 |
e-value: 2e-55 |
Identity: 61.33% |
Span: 540bp (70.0%) |
Frame: 1 |
| Nucleic acid-binding, OB-fold, putative [Medicago truncatula] |
| Match: gi|168019913|ref|XP_001762488.1| |
score: 209 |
e-value: 3e-52 |
Identity: 48.85% |
Span: 648bp (84.0%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162686221|gb|EDQ72611.1| predicted protein [Physcomitrella... |
| Match: gi|159488815|ref|XP_001702398.1| |
score: 156 |
e-value: 2e-36 |
Identity: 39.47% |
Span: 657bp (85.2%) |
Frame: 1 |
| hypothetical protein CHLREDRAFT_108094 [Chlamydomonas reinhardtii] >gi158271192|gb|EDO97018.1| predicted protein [Chl... |
| Match: gi|66802526|ref|XP_635135.1| |
score: 146 |
e-value: 2e-33 |
Identity: 38.54% |
Span: 612bp (79.4%) |
Frame: 1 |
| hypothetical protein DDB_G0291310 [Dictyostelium discoideum AX4] >gi60463454|gb|EAL61639.1| hypothetical protein DDB_... |
| Match: gi|281206417|gb|EFA80604.1| |
score: 146 |
e-value: 3e-33 |
Identity: 39% |
Span: 600bp (77.8%) |
Frame: 1 |
| Exosome complex exonuclease [Polysphondylium pallidum PN500] |
| Match: gi|226462693|gb|EEH59985.1| |
score: 145 |
e-value: 5e-33 |
Identity: 39.07% |
Span: 630bp (81.7%) |
Frame: 1 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|170104928|ref|XP_001883677.1| |
score: 142 |
e-value: 5e-32 |
Identity: 43.48% |
Span: 552bp (71.6%) |
Frame: 1 |
| predicted protein [Laccaria bicolor S238N-H82] >gi164641312|gb|EDR05573.1| predicted protein [Laccaria bicolor S238N-... |
| Match: gi|219363297|ref|NP_001136723.1| |
score: 140 |
e-value: 1e-31 |
Identity: 91.78% |
Span: 219bp (28.4%) |
Frame: 1 |
| hypothetical protein LOC100216860 [Zea mays] >gi194696768|gb|ACF82468.1| unknown [Zea mays] |
| Match: gi|116058063|emb|CAL54266.1| |
score: 139 |
e-value: 2e-31 |
Identity: 35.68% |
Span: 648bp (84.0%) |
Frame: 1 |
| Exosomal 3'-5' exoribonuclease complex, subunit Rrp4 (ISS) [Ostreococcus tauri] |
| Match: gi|145347330|ref|XP_001418126.1| |
score: 136 |
e-value: 2e-30 |
Identity: 36.12% |
Span: 648bp (84.0%) |
Frame: 1 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144578354|gb|ABO96419.1| predicted protein [Ostreococcus luci... |
| Match: gi|213404002|ref|XP_002172773.1| |
score: 132 |
e-value: 3e-29 |
Identity: 37.86% |
Span: 609bp (79.0%) |
Frame: 1 |
| exosome complex exonuclease RRP4 [Schizosaccharomyces japonicus yFS275] >gi212000820|gb|EEB06480.1| exosome complex e... |
| Match: gi|71021183|ref|XP_760822.1| |
score: 132 |
e-value: 3e-29 |
Identity: 36.41% |
Span: 570bp (73.9%) |
Frame: 1 |
| hypothetical protein UM04675.1 [Ustilago maydis 521] >gi46100196|gb|EAK85429.1| hypothetical protein UM04675.1 [Ustil... |
|
| 172 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1G03360.1 |
score: 296 |
e-value: 9e-81 |
Identity: 65.74% |
Span: 648bp (84.0%) |
Frame: 1 |
| Symbols: ATRRP4 | ATRRP4; exonuclease | chr1:824653-826179 FORWARD |
|
| swissprot [blastx] | Showing best 5 hits recorded |
| Match: Q09704 |
score: 127 |
e-value: 8e-29 |
Identity: 40.3% |
Span: 585bp (75.9%) |
Frame: 1 |
| Exosome complex component rrp4 OS=Schizosaccharomyces pombe GN=rrp4 PE=2 SV=1 |
| Match: Q8VBV3 |
score: 126 |
e-value: 1e-28 |
Identity: 40.21% |
Span: 582bp (75.5%) |
Frame: 1 |
| Exosome complex exonuclease RRP4 OS=Mus musculus GN=Exosc2 PE=2 SV=1 |
| Match: Q2KID0 |
score: 126 |
e-value: 1e-28 |
Identity: 40.72% |
Span: 582bp (75.5%) |
Frame: 1 |
| Exosome complex exonuclease RRP4 OS=Bos taurus GN=EXOSC2 PE=2 SV=1 |
| Match: Q13868 |
score: 123 |
e-value: 1e-27 |
Identity: 39.69% |
Span: 582bp (75.5%) |
Frame: 1 |
| Exosome complex exonuclease RRP4 OS=Homo sapiens GN=EXOSC2 PE=1 SV=2 |
| Match: P38792 |
score: 119 |
e-value: 3e-26 |
Identity: 34.89% |
Span: 633bp (82.1%) |
Frame: 1 |
| Exosome complex component RRP4 OS=Saccharomyces cerevisiae GN=RRP4 PE=1 SV=1 |
|
