| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270241485|emb|CBI28706.1| |
score: 276 |
e-value: 1e-72 |
Identity: 88.02% |
Span: 501bp (65.9%) |
Frame: -3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|15219950|ref|NP_173692.1| |
score: 270 |
e-value: 2e-70 |
Identity: 96.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding / structural constituent of ribosome [Arabidopsis thal... |
| Match: gi|224085191|ref|XP_002307515.1| |
score: 269 |
e-value: 3e-70 |
Identity: 94.74% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Populus trichocarpa] >gi222856964|gb|EEE94511.1| predicted protein [Populus trichocarpa] |
| Match: gi|224066487|ref|XP_002302108.1| |
score: 268 |
e-value: 5e-70 |
Identity: 95.39% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Populus trichocarpa] >gi118481417|gb|ABK92651.1| unknown [Populus trichocarpa] >gi|222843834|gb|EE... |
| Match: gi|13877525|gb|AAK43840.1|AF370463_1 |
score: 268 |
e-value: 5e-70 |
Identity: 95.39% |
Span: 456bp (60.0%) |
Frame: -3 |
| S18.A ribosomal protein [Arabidopsis thaliana] >gi17978783|gb|AAL47385.1| S18.A ribosomal protein [Arabidopsis thaliana] |
| Match: gi|270229315|emb|CBI18243.1| |
score: 267 |
e-value: 1e-69 |
Identity: 93.46% |
Span: 459bp (60.4%) |
Frame: -3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|255566712|ref|XP_002524340.1| |
score: 267 |
e-value: 1e-69 |
Identity: 94.08% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18, putative [Ricinus communis] >gi223536431|gb|EEF38080.1| 40S ribosomal protein S18, putativ... |
| Match: gi|224082650|ref|XP_002306780.1| |
score: 267 |
e-value: 1e-69 |
Identity: 94.74% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Populus trichocarpa] >gi118481499|gb|ABK92692.1| unknown [Populus trichocarpa] >gi|222856229|gb|EE... |
| Match: gi|247421835|gb|ACS96445.1| |
score: 265 |
e-value: 4e-69 |
Identity: 94.08% |
Span: 456bp (60.0%) |
Frame: -3 |
| S18.A ribosomal protein [Jatropha curcas] |
| Match: gi|225432662|ref|XP_002282412.1| |
score: 265 |
e-value: 4e-69 |
Identity: 93.42% |
Span: 456bp (60.0%) |
Frame: -3 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi225437044|ref|XP_002278727.1| PREDICTED: hypothetical protein [Vi... |
| Match: gi|255559398|ref|XP_002520719.1| |
score: 264 |
e-value: 9e-69 |
Identity: 93.42% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18, putative [Ricinus communis] >gi223540104|gb|EEF41681.1| 40S ribosomal protein S18, putativ... |
| Match: gi|255629053|gb|ACU14871.1| |
score: 263 |
e-value: 2e-68 |
Identity: 92.11% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Glycine max] |
| Match: gi|40287492|gb|AAR83860.1| |
score: 263 |
e-value: 2e-68 |
Identity: 91.45% |
Span: 456bp (60.0%) |
Frame: -3 |
| putative ribosomal protein [Capsicum annuum] |
| Match: gi|255629171|gb|ACU14930.1| |
score: 261 |
e-value: 4e-68 |
Identity: 91.45% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Glycine max] |
| Match: gi|223469633|gb|ACM90157.1| |
score: 261 |
e-value: 6e-68 |
Identity: 93.42% |
Span: 456bp (60.0%) |
Frame: -3 |
| S18 ribosomal protein [Jatropha curcas] |
| Match: gi|76573321|gb|ABA46765.1| |
score: 261 |
e-value: 7e-68 |
Identity: 90.79% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Solanum tuberosum] |
| Match: gi|217075242|gb|ACJ85981.1| |
score: 260 |
e-value: 9e-68 |
Identity: 90.79% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Medicago truncatula] |
| Match: gi|255628659|gb|ACU14674.1| |
score: 260 |
e-value: 1e-67 |
Identity: 91.45% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Glycine max] |
| Match: gi|168024894|ref|XP_001764970.1| |
score: 256 |
e-value: 1e-66 |
Identity: 88.82% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162683779|gb|EDQ70186.1| predicted protein [Physcomitrella... |
| Match: gi|217071380|gb|ACJ84050.1| |
score: 256 |
e-value: 2e-66 |
Identity: 88.82% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Medicago truncatula] |
| Match: gi|168004046|ref|XP_001754723.1| |
score: 256 |
e-value: 2e-66 |
Identity: 88.16% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi168049271|ref|XP_001777087.1| predicted protein [Physcomit... |
| Match: gi|294463827|gb|ADE77437.1| |
score: 256 |
e-value: 2e-66 |
Identity: 88.82% |
Span: 456bp (60.0%) |
Frame: -3 |
| unknown [Picea sitchensis] |
| Match: gi|168004052|ref|XP_001754726.1| |
score: 256 |
e-value: 2e-66 |
Identity: 87.5% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162694347|gb|EDQ80696.1| predicted protein [Physcomitrella... |
| Match: gi|168049335|ref|XP_001777119.1| |
score: 254 |
e-value: 5e-66 |
Identity: 87.5% |
Span: 456bp (60.0%) |
Frame: -3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162671562|gb|EDQ58112.1| predicted protein [Physcomitrella... |
| Match: gi|242043060|ref|XP_002459401.1| |
score: 252 |
e-value: 3e-65 |
Identity: 85.53% |
Span: 456bp (60.0%) |
Frame: -3 |
| hypothetical protein SORBIDRAFT_02g004110 [Sorghum bicolor] >gi241922778|gb|EER95922.1| hypothetical protein SORBIDRA... |
|
| 226 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4G09800.1 |
score: 270 |
e-value: 9e-73 |
Identity: 96.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| Symbols: RPS18C | RPS18C (S18 RIBOSOMAL PROTEIN); structural constituent of ribosome | chr4:6173815-6174960 FORWARD |
| Match: At1G34030.1 |
score: 270 |
e-value: 9e-73 |
Identity: 96.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 (RPS18B) | chr1:12370265-12371445 REVERSE |
| Match: At1G22780.1 |
score: 270 |
e-value: 9e-73 |
Identity: 96.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| Symbols: RPS18A, PFL1, PFL | PFL (POINTED FIRST LEAVES); structural constituent of ribosome | chr1:8067979-8069152 F... |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P34788 |
score: 270 |
e-value: 1e-71 |
Identity: 96.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Arabidopsis thaliana GN=RPS18A PE=1 SV=1 |
| Match: Q8ISP0 |
score: 228 |
e-value: 4e-59 |
Identity: 76.97% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Branchiostoma belcheri GN=RPS18 PE=2 SV=1 |
| Match: Q8IT98 |
score: 226 |
e-value: 1e-58 |
Identity: 76.3% |
Span: 405bp (53.3%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Aequipecten irradians GN=RPS18 PE=2 SV=1 |
| Match: Q8JGS9 |
score: 214 |
e-value: 5e-55 |
Identity: 71.71% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Danio rerio GN=rps18 PE=2 SV=1 |
| Match: Q962R1 |
score: 213 |
e-value: 8e-55 |
Identity: 72.37% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Spodoptera frugiperda GN=RpS18 PE=2 SV=1 |
| Match: Q90YQ5 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Ictalurus punctatus GN=rps18 PE=2 SV=1 |
| Match: P62271 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Rattus norvegicus GN=Rps18 PE=1 SV=3 |
| Match: P62272 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Sus scrofa GN=RPS18 PE=2 SV=3 |
| Match: P62270 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Mus musculus GN=Rps18 PE=2 SV=3 |
| Match: P62269 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Homo sapiens GN=RPS18 PE=1 SV=3 |
| Match: A5JST6 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Capra hircus GN=RPS18 PE=2 SV=1 |
| Match: Q5TJE9 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Canis familiaris GN=RPS18 PE=1 SV=3 |
| Match: Q3T0R1 |
score: 212 |
e-value: 2e-54 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Bos taurus GN=RPS18 PE=2 SV=3 |
| Match: P49202 |
score: 207 |
e-value: 5e-53 |
Identity: 69.4% |
Span: 402bp (52.9%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Chlamydomonas reinhardtii GN=RPS18 PE=2 SV=1 |
| Match: P41094 |
score: 206 |
e-value: 1e-52 |
Identity: 71.71% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Drosophila melanogaster GN=RpS18 PE=1 SV=1 |
| Match: O94754 |
score: 199 |
e-value: 2e-50 |
Identity: 71.05% |
Span: 456bp (60.0%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Schizosaccharomyces pombe GN=rps18a PE=1 SV=1 |
| Match: Q869U7 |
score: 196 |
e-value: 2e-49 |
Identity: 64.71% |
Span: 408bp (53.7%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Dictyostelium discoideum GN=rps18 PE=3 SV=1 |
| Match: P35271 |
score: 186 |
e-value: 1e-46 |
Identity: 62.04% |
Span: 405bp (53.3%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Saccharomyces cerevisiae GN=RPS18A PE=1 SV=4 |
| Match: P48151 |
score: 177 |
e-value: 7e-44 |
Identity: 60.29% |
Span: 405bp (53.3%) |
Frame: -3 |
| 40S ribosomal protein S18 OS=Entamoeba histolytica GN=RPS18 PE=2 SV=1 |
| Match: Q2NFZ3 |
score: 126 |
e-value: 2e-28 |
Identity: 43.51% |
Span: 393bp (51.7%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps13p PE=3 SV=1 |
| Match: O26141 |
score: 119 |
e-value: 2e-26 |
Identity: 42.97% |
Span: 384bp (50.5%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Methanobacterium thermoautotrophicum GN=rps13p PE=3 SV=1 |
| Match: A5UN52 |
score: 117 |
e-value: 1e-25 |
Identity: 40.62% |
Span: 384bp (50.5%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps13p PE=3 SV=1 |
| Match: O74021 |
score: 115 |
e-value: 3e-25 |
Identity: 43.45% |
Span: 435bp (57.2%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Pyrococcus horikoshii GN=rps13p PE=3 SV=1 |
| Match: Q8TVC1 |
score: 114 |
e-value: 5e-25 |
Identity: 44.36% |
Span: 393bp (51.7%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Methanopyrus kandleri GN=rps13p PE=3 SV=1 |
| Match: Q8U0E2 |
score: 114 |
e-value: 7e-25 |
Identity: 42.06% |
Span: 378bp (49.7%) |
Frame: -3 |
| 30S ribosomal protein S13P OS=Pyrococcus furiosus GN=rps13p PE=3 SV=1 |
|
| 35 lower scoring hits censored -- only 25 best hits are stored. |
