| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|118483404|gb|ABK93602.1| |
score: 162 |
e-value: 2e-38 |
Identity: 94.25% |
Span: 261bp (34.8%) |
Frame: 1 |
| unknown |
| Match: gi|115443949|ref|NP_001045754.1| |
score: 158 |
e-value: 3e-37 |
Identity: 90.8% |
Span: 261bp (34.8%) |
Frame: 1 |
| Os02g0126700 [Oryza sativa (japonica cultivar-group)] >gi41053075|dbj|BAD08019.1| putative small nuclear ribonucleopr... |
| Match: gi|18417572|ref|NP_567844.1| |
score: 155 |
e-value: 4e-36 |
Identity: 89.66% |
Span: 261bp (34.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative [Arabidopsis thaliana] >gi21... |
| Match: gi|15224217|ref|NP_179464.1| |
score: 155 |
e-value: 4e-36 |
Identity: 89.66% |
Span: 261bp (34.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative [Arabidopsis thaliana] >gi41... |
| Match: gi|157343567|emb|CAO68073.1| |
score: 154 |
e-value: 6e-36 |
Identity: 91.76% |
Span: 255bp (34.0%) |
Frame: 1 |
| unnamed |
| Match: gi|168027770|ref|XP_001766402.1| |
score: 154 |
e-value: 6e-36 |
Identity: 89.53% |
Span: 258bp (34.4%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi168048491|ref|XP_001776700.1| predicted protein [Physcomit... |
| Match: gi|116779305|gb|ABK21228.1| |
score: 153 |
e-value: 1e-35 |
Identity: 87.36% |
Span: 261bp (34.8%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|168008828|ref|XP_001757108.1| |
score: 150 |
e-value: 1e-34 |
Identity: 86.05% |
Span: 258bp (34.4%) |
Frame: 1 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691606|gb|EDQ77967.1| predicted protein [Physcomitrella... |
| Match: gi|7269933|emb|CAB81026.1| |
score: 150 |
e-value: 7e-35 |
Identity: 90.48% |
Span: 252bp (33.6%) |
Frame: 1 |
| small nuclear ribonucleoprotein homolog [Arabidopsis thaliana] |
| Match: gi|159472134|ref|XP_001694206.1| |
score: 137 |
e-value: 6e-31 |
Identity: 75.58% |
Span: 258bp (34.4%) |
Frame: 1 |
| small nuclear ribonucleoprotein E [Chlamydomonas reinhardtii] >gi158276869|gb|EDP02639.1| small nuclear ribonucleopro... |
| Match: gi|125560150|gb|EAZ05598.1| |
score: 135 |
e-value: 2e-30 |
Identity: 82.76% |
Span: 261bp (34.8%) |
Frame: 1 |
| hypothetical protein OsI_27814 [Oryza sativa Indica Group] >gi125560167|gb|EAZ05615.1| hypothetical protein OsI_27832... |
| Match: gi|125537908|gb|EAY84303.1| |
score: 134 |
e-value: 9e-30 |
Identity: 56.43% |
Span: 261bp (34.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|125602202|gb|EAZ41527.1| |
score: 131 |
e-value: 4e-29 |
Identity: 82.35% |
Span: 255bp (34.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|116780366|gb|ABK21652.1| |
score: 129 |
e-value: 3e-28 |
Identity: 77.01% |
Span: 261bp (34.8%) |
Frame: 1 |
| unknown |
| Match: gi|145356609|ref|XP_001422520.1| |
score: 129 |
e-value: 2e-28 |
Identity: 74.42% |
Span: 258bp (34.4%) |
Frame: 1 |
| predicted |
| Match: gi|52346208|ref|NP_001005147.1| |
score: 126 |
e-value: 2e-27 |
Identity: 72.84% |
Span: 243bp (32.4%) |
Frame: 1 |
| MGC89991 |
| Match: gi|156378619|ref|XP_001631239.1| |
score: 126 |
e-value: 2e-27 |
Identity: 68.97% |
Span: 261bp (34.8%) |
Frame: 1 |
| predicted |
| Match: gi|148707696|gb|EDL39643.1| |
score: 125 |
e-value: 4e-27 |
Identity: 72.84% |
Span: 243bp (32.4%) |
Frame: 1 |
| small |
| Match: gi|4507129|ref|NP_003085.1| |
score: 125 |
e-value: 4e-27 |
Identity: 72.84% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|4507129|ref|NP_003085.1| small nuclear ribonucleoprotein polypeptide E [Homo sapiens] gi|27883844|ref|NP_033253.1|... |
| Match: gi|109484106|ref|XP_001064438.1| |
score: 125 |
e-value: 4e-27 |
Identity: 72.84% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|147902475|ref|NP_001090971.1| |
score: 125 |
e-value: 4e-27 |
Identity: 72.84% |
Span: 243bp (32.4%) |
Frame: 1 |
| NADH |
| Match: gi|148226114|ref|NP_001085570.1| |
score: 125 |
e-value: 4e-27 |
Identity: 70.37% |
Span: 243bp (32.4%) |
Frame: 1 |
| MGC82471 |
| Match: gi|118781504|ref|XP_311506.3| |
score: 125 |
e-value: 4e-27 |
Identity: 68.29% |
Span: 246bp (32.8%) |
Frame: 1 |
| ENSANGP00000022836 |
| Match: gi|110759899|ref|XP_001119876.1| |
score: 124 |
e-value: 9e-27 |
Identity: 69.51% |
Span: 246bp (32.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|149408455|ref|XP_001513314.1| |
score: 124 |
e-value: 5e-27 |
Identity: 71.6% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|119903516|ref|XP_001251765.1| |
score: 123 |
e-value: 2e-26 |
Identity: 70.37% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|62667426|ref|XP_341121.2| |
score: 123 |
e-value: 1e-26 |
Identity: 71.6% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|156554389|ref|XP_001600882.1| |
score: 123 |
e-value: 1e-26 |
Identity: 69.51% |
Span: 246bp (32.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|72111472|ref|XP_779936.1| |
score: 123 |
e-value: 1e-26 |
Identity: 67.82% |
Span: 261bp (34.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55632867|ref|XP_520443.1| |
score: 123 |
e-value: 1e-26 |
Identity: 71.6% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|147904965|ref|NP_001085500.1| |
score: 122 |
e-value: 3e-26 |
Identity: 69.14% |
Span: 243bp (32.4%) |
Frame: 1 |
| MGC80249 |
| Match: gi|145329170|ref|NP_001077914.1| |
score: 122 |
e-value: 3e-26 |
Identity: 87.14% |
Span: 210bp (28.0%) |
Frame: 1 |
| small |
| Match: gi|47227397|emb|CAF96946.1| |
score: 122 |
e-value: 3e-26 |
Identity: 69.14% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|47227397|emb|CAF96946.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|170065245|ref|XP_001867860.1| |
score: 122 |
e-value: 2e-26 |
Identity: 67.07% |
Span: 246bp (32.8%) |
Frame: 1 |
| small |
| Match: gi|74747670|sp|Q5VYJ4|RUEL1_HUMAN |
score: 122 |
e-value: 3e-26 |
Identity: 70.37% |
Span: 243bp (32.4%) |
Frame: 1 |
| Putative |
| Match: gi|125985901|ref|XP_001356714.1| |
score: 122 |
e-value: 3e-26 |
Identity: 67.86% |
Span: 252bp (33.6%) |
Frame: 1 |
| GA15004-PA |
| Match: gi|41055945|ref|NP_957298.1| |
score: 121 |
e-value: 6e-26 |
Identity: 70.37% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|41055945|ref|NP_957298.1| similar to small nuclear ribonucleoprotein E [Danio rerio] >gi|29124607|gb|AAH49062.1| Z... |
| Match: gi|157128750|ref|XP_001661504.1| |
score: 121 |
e-value: 4e-26 |
Identity: 67.07% |
Span: 246bp (32.8%) |
Frame: 1 |
| SM |
| Match: gi|24582631|ref|NP_609162.1| |
score: 120 |
e-value: 8e-26 |
Identity: 69.14% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|24582631|ref|NP_609162.1| CG18591-PA [Drosophila melanogaster] gi|29428063|sp|Q9VLV5|RUXE_DROME Probable small nuc... |
| Match: gi|169213483|ref|XP_001726433.1| |
score: 120 |
e-value: 1e-25 |
Identity: 70.37% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|115474803|ref|NP_001060998.1| |
score: 120 |
e-value: 8e-26 |
Identity: 92.19% |
Span: 192bp (25.6%) |
Frame: 1 |
| Os08g0151400 |
| Match: gi|312005|emb|CAA46626.1| |
score: 119 |
e-value: 2e-25 |
Identity: 71.79% |
Span: 234bp (31.2%) |
Frame: 1 |
| gi|312005|emb|CAA46626.1| small nuclear ribonucleoprotein E [Mus musculus] gi|338269|gb|AAA36621.1| small nuclear rib... |
| Match: gi|170579069|ref|XP_001894662.1| |
score: 119 |
e-value: 2e-25 |
Identity: 65.17% |
Span: 267bp (35.6%) |
Frame: 1 |
| small |
| Match: gi|119912487|ref|XP_001255822.1| |
score: 119 |
e-value: 3e-25 |
Identity: 69.14% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|114051397|ref|NP_001040370.1| |
score: 118 |
e-value: 5e-25 |
Identity: 66.67% |
Span: 243bp (32.4%) |
Frame: 1 |
| small |
| Match: gi|193809920|emb|CAQ41114.1| |
score: 115 |
e-value: 4e-24 |
Identity: 60% |
Span: 270bp (36.0%) |
Frame: 1 |
| small |
| Match: gi|156096492|ref|XP_001614280.1| |
score: 113 |
e-value: 2e-23 |
Identity: 58.89% |
Span: 270bp (36.0%) |
Frame: 1 |
| small |
| Match: gi|124513718|ref|XP_001350215.1| |
score: 113 |
e-value: 2e-23 |
Identity: 60.47% |
Span: 258bp (34.4%) |
Frame: 1 |
| small |
| Match: gi|148707697|gb|EDL39644.1| |
score: 113 |
e-value: 1e-23 |
Identity: 73.97% |
Span: 219bp (29.2%) |
Frame: 1 |
| small |
| Match: gi|338259|gb|AAB59365.1| |
score: 112 |
e-value: 2e-23 |
Identity: 74.65% |
Span: 213bp (28.4%) |
Frame: 1 |
| gi|338259|gb|AAB59365.1| small nuclear ribonucleic protein |
| Match: gi|190586556|gb|EDV26609.1| |
score: 112 |
e-value: 2e-23 |
Identity: 65.82% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|114572020|ref|XP_001158422.1| |
score: 112 |
e-value: 2e-23 |
Identity: 74.65% |
Span: 213bp (28.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|149707944|ref|XP_001488959.1| |
score: 110 |
e-value: 1e-22 |
Identity: 63.86% |
Span: 249bp (33.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|157772985|ref|XP_001664557.1| |
score: 110 |
e-value: 8e-23 |
Identity: 63.29% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|68071133|ref|XP_677480.1| |
score: 110 |
e-value: 8e-23 |
Identity: 58.14% |
Span: 258bp (34.4%) |
Frame: 1 |
| small |
| Match: gi|114661336|ref|XP_001155342.1| |
score: 110 |
e-value: 1e-22 |
Identity: 65.43% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|70954423|ref|XP_746259.1| |
score: 110 |
e-value: 1e-22 |
Identity: 56.98% |
Span: 258bp (34.4%) |
Frame: 1 |
| Plasmodium |
| Match: gi|167533668|ref|XP_001748513.1| |
score: 108 |
e-value: 5e-22 |
Identity: 63.29% |
Span: 237bp (31.6%) |
Frame: 1 |
| predicted |
| Match: gi|17556060|ref|NP_499620.1| |
score: 108 |
e-value: 4e-22 |
Identity: 59.76% |
Span: 246bp (32.8%) |
Frame: 1 |
| gi|17556060|ref|NP_499620.1| small nuclear ribonucleoprotein, small nuclear ribonucleoprotein SNR-6 (snr-6) [Caenorha... |
| Match: gi|119916570|ref|XP_001252072.1| |
score: 108 |
e-value: 4e-22 |
Identity: 66.25% |
Span: 240bp (32.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|109114039|ref|XP_001114633.1| |
score: 108 |
e-value: 3e-22 |
Identity: 67.09% |
Span: 237bp (31.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|114572018|ref|XP_001158207.1| |
score: 105 |
e-value: 4e-21 |
Identity: 72.06% |
Span: 204bp (27.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|156083891|ref|XP_001609429.1| |
score: 102 |
e-value: 4e-20 |
Identity: 62.03% |
Span: 237bp (31.6%) |
Frame: 1 |
| small |
| Match: gi|71027525|ref|XP_763406.1| |
score: 101 |
e-value: 6e-20 |
Identity: 62.03% |
Span: 237bp (31.6%) |
Frame: 1 |
| small |
| Match: gi|170085379|ref|XP_001873913.1| |
score: 101 |
e-value: 6e-20 |
Identity: 60.98% |
Span: 243bp (32.4%) |
Frame: 1 |
| predicted |
| Match: gi|109018744|ref|XP_001099502.1| |
score: 101 |
e-value: 5e-20 |
Identity: 63.86% |
Span: 243bp (32.4%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|109018143|ref|XP_001098283.1| |
score: 100 |
e-value: 1e-19 |
Identity: 64.94% |
Span: 231bp (30.8%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|146182714|ref|XP_001471048.1| |
score: 98.6 |
e-value: 4e-19 |
Identity: 49.44% |
Span: 267bp (35.6%) |
Frame: 1 |
| Small |
| Match: gi|164663173|ref|XP_001732708.1| |
score: 97.8 |
e-value: 7e-19 |
Identity: 57.32% |
Span: 243bp (32.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|50426351|ref|XP_461772.1| |
score: 95.9 |
e-value: 3e-18 |
Identity: 58.44% |
Span: 231bp (30.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|19112516|ref|NP_595724.1| |
score: 95.5 |
e-value: 3e-18 |
Identity: 55.56% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|19112516|ref|NP_595724.1| putative small nuclear ribonucleoprotein E [Schizosaccharomyces pombe] gi|7492986|pir||T... |
| Match: gi|150865716|ref|XP_001385048.2| |
score: 93.6 |
e-value: 1e-17 |
Identity: 55.84% |
Span: 231bp (30.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|60692530|gb|AAX30632.1| |
score: 90.5 |
e-value: 1e-16 |
Identity: 62.86% |
Span: 210bp (28.0%) |
Frame: 1 |
| SJCHGC06135 |
| Match: gi|71015586|ref|XP_758826.1| |
score: 90.1 |
e-value: 1e-16 |
Identity: 58.11% |
Span: 219bp (29.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|46111729|ref|XP_382922.1| |
score: 90.1 |
e-value: 1e-16 |
Identity: 52.38% |
Span: 237bp (31.6%) |
Frame: 1 |
| gi|46111729|ref|XP_382922.1| hypothetical protein FG02746.1 [Gibberella zeae PH-1] >gi|42546627|gb|EAA69470.1| hypoth... |
| Match: gi|58271500|ref|XP_572906.1| |
score: 89.4 |
e-value: 2e-16 |
Identity: 54.76% |
Span: 231bp (30.8%) |
Frame: 1 |
| small |
| Match: gi|109471120|ref|XP_001062864.1| |
score: 88.2 |
e-value: 5e-16 |
Identity: 71.19% |
Span: 177bp (23.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|50549605|ref|XP_502273.1| |
score: 88.2 |
e-value: 5e-16 |
Identity: 50.63% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|114145714|ref|NP_001041324.1| |
score: 88.2 |
e-value: 5e-16 |
Identity: 71.19% |
Span: 177bp (23.6%) |
Frame: 1 |
| similar |
| Match: gi|109471122|ref|XP_001062927.1| |
score: 88.2 |
e-value: 5e-16 |
Identity: 71.19% |
Span: 177bp (23.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|189210563|ref|XP_001941613.1| |
score: 87.4 |
e-value: 9e-16 |
Identity: 52.5% |
Span: 228bp (30.4%) |
Frame: 1 |
| small |
| Match: gi|149235887|ref|XP_001523821.1| |
score: 87 |
e-value: 1e-15 |
Identity: 53.66% |
Span: 246bp (32.8%) |
Frame: 1 |
| conserved |
| Match: gi|126647281|ref|XP_001388059.1| |
score: 87 |
e-value: 1e-15 |
Identity: 53.09% |
Span: 237bp (31.6%) |
Frame: 1 |
| small |
| Match: gi|146418481|ref|XP_001485206.1| |
score: 87 |
e-value: 1e-15 |
Identity: 59.46% |
Span: 222bp (29.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|156045543|ref|XP_001589327.1| |
score: 86.3 |
e-value: 2e-15 |
Identity: 51.81% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|169620926|ref|XP_001803874.1| |
score: 85.9 |
e-value: 3e-15 |
Identity: 52.44% |
Span: 228bp (30.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|145613670|ref|XP_363524.2| |
score: 85.5 |
e-value: 4e-15 |
Identity: 52.94% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|190346690|gb|EDK38837.2| |
score: 84.7 |
e-value: 6e-15 |
Identity: 58.11% |
Span: 222bp (29.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|145492122|ref|XP_001432059.1| |
score: 84.7 |
e-value: 6e-15 |
Identity: 49.37% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|45184940|ref|NP_982658.1| |
score: 84.3 |
e-value: 8e-15 |
Identity: 50% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|45184940|ref|NP_982658.1| AAR116Wp [Eremothecium gossypii] >gi|44980549|gb|AAS50482.1| AAR116Wp [Eremothecium goss... |
| Match: gi|6324733|ref|NP_014802.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 49.44% |
Span: 243bp (32.4%) |
Frame: 1 |
| gi|6324733|ref|NP_014802.1| Required for pre-mRNA splicing, cap modification and U1, U2, U4 and U5 snRNA stability; S... |
| Match: gi|85107508|ref|XP_962388.1| |
score: 83.2 |
e-value: 2e-14 |
Identity: 48.81% |
Span: 237bp (31.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|145237192|ref|XP_001391243.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 50.62% |
Span: 231bp (30.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|156836424|ref|XP_001642276.1| |
score: 82 |
e-value: 4e-14 |
Identity: 51.81% |
Span: 228bp (30.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|171683351|ref|XP_001906618.1| |
score: 82 |
e-value: 4e-14 |
Identity: 48.81% |
Span: 237bp (31.6%) |
Frame: 1 |
| unnamed |
| Match: gi|119483034|ref|XP_001261545.1| |
score: 81.3 |
e-value: 7e-14 |
Identity: 49.38% |
Span: 231bp (30.8%) |
Frame: 1 |
| LSM |
| Match: gi|70986850|ref|XP_748912.1| |
score: 81.3 |
e-value: 7e-14 |
Identity: 49.38% |
Span: 231bp (30.8%) |
Frame: 1 |
| small |
| Match: gi|115399850|ref|XP_001215514.1| |
score: 81.3 |
e-value: 7e-14 |
Identity: 49.38% |
Span: 231bp (30.8%) |
Frame: 1 |
| small |
| Match: gi|121711637|ref|XP_001273434.1| |
score: 80.9 |
e-value: 9e-14 |
Identity: 49.38% |
Span: 231bp (30.8%) |
Frame: 1 |
| small |
| Match: gi|50302335|ref|XP_451102.1| |
score: 79.7 |
e-value: 2e-13 |
Identity: 46.67% |
Span: 249bp (33.2%) |
Frame: 1 |
| unnamed |
|
| 7 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At2G18740.1 |
score: 155 |
e-value: 3e-38 |
Identity: 89.66% |
Span: 261bp (34.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | chr2:8130416-8131792 FORWARD |
| Match: At4G30330.1 |
score: 155 |
e-value: 3e-38 |
Identity: 89.66% |
Span: 261bp (34.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | chr4:14836779-14837925 RE... |
| Match: At2G18740.2 |
score: 122 |
e-value: 2e-28 |
Identity: 87.14% |
Span: 210bp (28.0%) |
Frame: 1 |
| small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative | chr2:8130416-8131663 FORWARD |
|
