| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At5G28750.1 |
score: 116 |
e-value: 1e-26 |
Identity: 60.61% |
Span: 294bp (39.4%) |
Frame: 1 |
| thylakoid assembly protein, putative | chr5:10784146-10785681 REVERSE |
| Match: At5G52440.1 |
score: 58.5 |
e-value: 4e-09 |
Identity: 50% |
Span: 159bp (21.3%) |
Frame: 1 |
| Symbols: HCF106 | HCF106 (High chlorophyll fluorescence 106) | chr5:21304122-21305839 FORWARD |
|
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|4929305|gb|AAD33943.1| |
score: 120 |
e-value: 6e-26 |
Identity: 60.82% |
Span: 291bp (39.0%) |
Frame: 1 |
| gi|4929305|gb|AAD33943.1| Tha4 protein [Pisum sativum] |
| Match: gi|4877984|gb|AAD31522.1| |
score: 120 |
e-value: 8e-26 |
Identity: 62.38% |
Span: 300bp (40.2%) |
Frame: 1 |
| gi|4877984|gb|AAD31522.1| THA4 [Zea mays] |
| Match: gi|4877986|gb|AAD31523.1| |
score: 119 |
e-value: 2e-25 |
Identity: 61.54% |
Span: 300bp (40.2%) |
Frame: 1 |
| gi|4877986|gb|AAD31523.1| THA9 [Zea mays] |
| Match: gi|50917153|ref|XP_468973.1| |
score: 118 |
e-value: 2e-25 |
Identity: 66.67% |
Span: 270bp (36.1%) |
Frame: 1 |
| putative |
| Match: gi|15241912|ref|NP_198227.1| |
score: 116 |
e-value: 8e-25 |
Identity: 60.61% |
Span: 294bp (39.4%) |
Frame: 1 |
| thylakoid assembly protein, putative [Arabidopsis thaliana] >gi11762160|gb|AAG40358.1|AF325006_1 AT5g28750 [Arabidops... |
| Match: gi|44662991|gb|AAS47586.1| |
score: 95.1 |
e-value: 3e-18 |
Identity: 55.56% |
Span: 270bp (36.1%) |
Frame: 1 |
| chloroplast Tha4-1 [Physcomitrella patens] |
| Match: gi|44662993|gb|AAS47587.1| |
score: 92.4 |
e-value: 2e-17 |
Identity: 57.65% |
Span: 255bp (34.1%) |
Frame: 1 |
| gi|44662993|gb|AAS47587.1| chloroplast Tha4-2 [Physcomitrella patens] |
| Match: gi|56751296|ref|YP_171997.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 45.45% |
Span: 231bp (30.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|23129516|ref|ZP_00111343.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 46.99% |
Span: 249bp (33.3%) |
Frame: 1 |
| gi|23129516|ref|ZP_00111343.1| COG1826: Sec-independent protein secretion pathway components [Nostoc punctiforme] |
| Match: gi|87125091|ref|ZP_01080938.1| |
score: 80.9 |
e-value: 5e-14 |
Identity: 60.61% |
Span: 195bp (26.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|78196275|gb|ABB34040.1| |
score: 79.3 |
e-value: 1e-13 |
Identity: 56.52% |
Span: 192bp (25.7%) |
Frame: 1 |
| twin-arginine |
| Match: gi|33864103|ref|NP_895663.1| |
score: 79.3 |
e-value: 1e-13 |
Identity: 52.86% |
Span: 201bp (26.9%) |
Frame: 1 |
| gi|33864103|ref|NP_895663.1| mttA/Hcf106 family [Prochlorococcus marinus str. MIT 9313] gi|33635687|emb|CAE22011.1| m... |
| Match: gi|16329622|ref|NP_440350.1| |
score: 79.3 |
e-value: 1e-13 |
Identity: 44.71% |
Span: 255bp (34.1%) |
Frame: 1 |
| gi|16329622|ref|NP_440350.1| hypothetical protein [Synechocystis sp. PCC 6803] gi|7470329|pir||S74990 hypothetical pr... |
| Match: gi|78169941|gb|ABB27038.1| |
score: 79.3 |
e-value: 1e-13 |
Identity: 49.37% |
Span: 237bp (31.7%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|88808010|ref|ZP_01123521.1| |
score: 78.2 |
e-value: 3e-13 |
Identity: 61.29% |
Span: 186bp (24.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|33864806|ref|NP_896365.1| |
score: 77.8 |
e-value: 4e-13 |
Identity: 57.58% |
Span: 189bp (25.3%) |
Frame: 1 |
| gi|33864806|ref|NP_896365.1| conserved hypothetical protein [Synechococcus sp. WH 8102] gi|33632329|emb|CAE06785.1| c... |
| Match: gi|84518676|ref|ZP_01006025.1| |
score: 77.8 |
e-value: 4e-13 |
Identity: 54.41% |
Span: 195bp (26.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|87301943|ref|ZP_01084777.1| |
score: 77 |
e-value: 7e-13 |
Identity: 42.57% |
Span: 246bp (32.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|33239734|ref|NP_874676.1| |
score: 77 |
e-value: 7e-13 |
Identity: 50% |
Span: 216bp (28.9%) |
Frame: 1 |
| gi|33239734|ref|NP_874676.1| Sec-independent protein secretion pathway component TatA [Prochlorococcus marinus subsp.... |
| Match: gi|75910646|ref|YP_324942.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 43.9% |
Span: 246bp (32.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|17130190|dbj|BAB72802.1| |
score: 76.3 |
e-value: 1e-12 |
Identity: 43.9% |
Span: 246bp (32.9%) |
Frame: 1 |
| asl0845 |
| Match: gi|32307512|gb|AAP79161.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 43.01% |
Span: 276bp (36.9%) |
Frame: 1 |
| gi|32307512|gb|AAP79161.1| Tha4 plastid transport protein [Bigelowiella natans] |
| Match: gi|67923730|ref|ZP_00517196.1| |
score: 75.1 |
e-value: 3e-12 |
Identity: 41.3% |
Span: 276bp (36.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|78713402|gb|ABB50579.1| |
score: 74.7 |
e-value: 4e-12 |
Identity: 51.39% |
Span: 216bp (28.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|72383453|ref|YP_292808.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 62.75% |
Span: 153bp (20.5%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|22298928|ref|NP_682175.1| |
score: 74.3 |
e-value: 5e-12 |
Identity: 43.04% |
Span: 237bp (31.7%) |
Frame: 1 |
| gi|22298928|ref|NP_682175.1| ORF_ID:tsl1385~hypothetical protein [Thermosynechococcus elongatus BP-1] gi|22295109|dbj... |
| Match: gi|86609884|ref|YP_478646.1| |
score: 70.5 |
e-value: 7e-11 |
Identity: 50.75% |
Span: 201bp (26.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|110167502|gb|ABG52042.1| |
score: 69.7 |
e-value: 1e-10 |
Identity: 52.83% |
Span: 159bp (21.3%) |
Frame: 1 |
| twin-arginine |
| Match: gi|33240680|ref|NP_875622.1| |
score: 69.7 |
e-value: 1e-10 |
Identity: 59.62% |
Span: 156bp (20.9%) |
Frame: 1 |
| gi|33240680|ref|NP_875622.1| Sec-independent protein secretion pathway component TatA [Prochlorococcus marinus subsp.... |
| Match: gi|91070087|gb|ABE11011.1| |
score: 68.9 |
e-value: 2e-10 |
Identity: 40.24% |
Span: 231bp (30.9%) |
Frame: 1 |
| mttA/Hcf106 |
| Match: gi|78712234|gb|ABB49411.1| |
score: 68.9 |
e-value: 2e-10 |
Identity: 40.26% |
Span: 231bp (30.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|33860932|ref|NP_892493.1| |
score: 68.2 |
e-value: 3e-10 |
Identity: 55.77% |
Span: 156bp (20.9%) |
Frame: 1 |
| gi|33860932|ref|NP_892493.1| mttA/Hcf106 family [Prochlorococcus marinus subsp. pastoris str. CCMP1378] gi|33639664|e... |
| Match: gi|86605468|ref|YP_474231.1| |
score: 66.6 |
e-value: 1e-09 |
Identity: 56.86% |
Span: 153bp (20.5%) |
Frame: 1 |
| twin-arginine |
| Match: gi|108864546|gb|ABA94503.2| |
score: 66.2 |
e-value: 1e-09 |
Identity: 38.84% |
Span: 294bp (39.4%) |
Frame: 1 |
| HCF106 |
| Match: gi|33860901|ref|NP_892462.1| |
score: 65.9 |
e-value: 2e-09 |
Identity: 46.03% |
Span: 180bp (24.1%) |
Frame: 1 |
| gi|33860901|ref|NP_892462.1| mttA/Hcf106 family [Prochlorococcus marinus subsp. pastoris str. CCMP1378] gi|33633843|e... |
| Match: gi|35213573|dbj|BAC90944.1| |
score: 65.5 |
e-value: 2e-09 |
Identity: 40% |
Span: 255bp (34.1%) |
Frame: 1 |
| gsr3003 |
| Match: gi|46198326|ref|YP_003993.1| |
score: 65.1 |
e-value: 3e-09 |
Identity: 41.43% |
Span: 210bp (28.1%) |
Frame: 1 |
| gi|46198326|ref|YP_003993.1| Sec-independent protein translocase protein tatA [Thermus thermophilus HB27] >gi|4619594... |
| Match: gi|2665536|gb|AAC01571.1| |
score: 63.9 |
e-value: 6e-09 |
Identity: 48.53% |
Span: 183bp (24.5%) |
Frame: 1 |
| gi|2665536|gb|AAC01571.1| HCF106 precursor protein [Zea mays] |
| Match: gi|93452600|gb|EAT03174.1| |
score: 63.9 |
e-value: 6e-09 |
Identity: 39.53% |
Span: 246bp (32.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|7542516|gb|AAF63480.1| |
score: 63.9 |
e-value: 6e-09 |
Identity: 48.53% |
Span: 183bp (24.5%) |
Frame: 1 |
| gi|7542516|gb|AAF63480.1| HCF106C precursor protein [Zea mays] >gi|7542514|gb|AAF63479.1| HCF106C precursor protein [... |
| Match: gi|55771768|dbj|BAD70209.1| |
score: 63.5 |
e-value: 8e-09 |
Identity: 40% |
Span: 210bp (28.1%) |
Frame: 1 |
| Sec-independent |
| Match: gi|86606705|ref|YP_475468.1| |
score: 59.7 |
e-value: 1e-07 |
Identity: 38.82% |
Span: 255bp (34.1%) |
Frame: 1 |
| Sec-independent |
| Match: gi|92878971|gb|ABE85329.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 51.67% |
Span: 159bp (21.3%) |
Frame: 1 |
| Bacterial |
| Match: gi|15277532|gb|AAK93949.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 51.67% |
Span: 159bp (21.3%) |
Frame: 1 |
| gi|15277532|gb|AAK93949.1| HCF106 [Pisum sativum] |
| Match: gi|86609425|ref|YP_478187.1| |
score: 58.9 |
e-value: 2e-07 |
Identity: 46.27% |
Span: 201bp (26.9%) |
Frame: 1 |
| Sec-independent |
| Match: gi|77685166|ref|ZP_00800574.1| |
score: 58.5 |
e-value: 3e-07 |
Identity: 46.3% |
Span: 159bp (21.3%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|15237156|ref|NP_200057.1| |
score: 58.5 |
e-value: 3e-07 |
Identity: 50% |
Span: 159bp (21.3%) |
Frame: 1 |
| HCF106; proton motive force dependent protein transmembrane transporter [Arabidopsis thaliana] >gi4894914|gb|AAD32652... |
| Match: gi|53687490|ref|ZP_00107370.2| |
score: 57.8 |
e-value: 5e-07 |
Identity: 47.27% |
Span: 165bp (22.1%) |
Frame: 1 |
| COG1826: |
| Match: gi|50877509|emb|CAG37349.1| |
score: 57.8 |
e-value: 5e-07 |
Identity: 40.91% |
Span: 192bp (25.7%) |
Frame: 1 |
| related |
| Match: gi|95928926|ref|ZP_01311671.1| |
score: 57.4 |
e-value: 6e-07 |
Identity: 46.43% |
Span: 165bp (22.1%) |
Frame: 1 |
| twin-arginine |
| Match: gi|39985226|gb|AAR36581.1| |
score: 57 |
e-value: 8e-07 |
Identity: 40.32% |
Span: 186bp (24.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|77997264|gb|ABB16163.1| |
score: 56.2 |
e-value: 1e-06 |
Identity: 46.81% |
Span: 141bp (18.9%) |
Frame: 1 |
| twin-arginine |
| Match: gi|83590126|ref|YP_430135.1| |
score: 56.2 |
e-value: 1e-06 |
Identity: 42.65% |
Span: 195bp (26.1%) |
Frame: 1 |
| twin-arginine |
| Match: gi|17133012|dbj|BAB75577.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 38.1% |
Span: 189bp (25.3%) |
Frame: 1 |
| asr3878 |
| Match: gi|75908036|ref|YP_322332.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 41.82% |
Span: 165bp (22.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|39981895|gb|AAR33357.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 41.51% |
Span: 159bp (21.3%) |
Frame: 1 |
| mttA/Hcf106 |
| Match: gi|44662995|gb|AAS47588.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 35.42% |
Span: 243bp (32.5%) |
Frame: 1 |
| chloroplast Hcf106-1 [Physcomitrella patens] |
| Match: gi|94984712|ref|YP_604076.1| |
score: 55.1 |
e-value: 3e-06 |
Identity: 42.62% |
Span: 183bp (24.5%) |
Frame: 1 |
| twin-arginine |
| Match: gi|95928927|ref|ZP_01311672.1| |
score: 54.7 |
e-value: 4e-06 |
Identity: 29.11% |
Span: 237bp (31.7%) |
Frame: 1 |
| twin-arginine |
| Match: gi|78195981|gb|ABB33748.1| |
score: 54.7 |
e-value: 4e-06 |
Identity: 39.62% |
Span: 159bp (21.3%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|71546080|ref|ZP_00666945.1| |
score: 54.3 |
e-value: 5e-06 |
Identity: 43.33% |
Span: 180bp (24.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|67923190|ref|ZP_00516678.1| |
score: 54.3 |
e-value: 5e-06 |
Identity: 46.94% |
Span: 147bp (19.7%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|83816574|ref|YP_444810.1| |
score: 53.9 |
e-value: 7e-06 |
Identity: 36.71% |
Span: 225bp (30.1%) |
Frame: 1 |
| putative |
| Match: gi|68552035|ref|ZP_00591428.1| |
score: 53.9 |
e-value: 7e-06 |
Identity: 38.89% |
Span: 216bp (28.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|35211273|dbj|BAC88652.1| |
score: 53.9 |
e-value: 7e-06 |
Identity: 35.82% |
Span: 201bp (26.9%) |
Frame: 1 |
| gsl0711 |
| Match: gi|86137562|ref|ZP_01056139.1| |
score: 53.9 |
e-value: 7e-06 |
Identity: 38.37% |
Span: 225bp (30.1%) |
Frame: 1 |
| twin-arginine |
| Match: gi|39576203|emb|CAE80368.1| |
score: 53.5 |
e-value: 9e-06 |
Identity: 34.67% |
Span: 213bp (28.5%) |
Frame: 1 |
| twin-arginine-dependent |
| Match: gi|67938449|ref|ZP_00530974.1| |
score: 53.5 |
e-value: 9e-06 |
Identity: 38.81% |
Span: 201bp (26.9%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|68550463|ref|ZP_00589911.1| |
score: 53.5 |
e-value: 9e-06 |
Identity: 41.43% |
Span: 210bp (28.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|94987031|ref|YP_594964.1| |
score: 53.1 |
e-value: 1e-05 |
Identity: 43.4% |
Span: 159bp (21.3%) |
Frame: 1 |
| Sec-independent |
| Match: gi|88937130|ref|ZP_01142713.1| |
score: 53.1 |
e-value: 1e-05 |
Identity: 29.07% |
Span: 252bp (33.7%) |
Frame: 1 |
| similar |
| Match: gi|21647618|gb|AAM72841.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 41.38% |
Span: 174bp (23.3%) |
Frame: 1 |
| Sec-independent |
| Match: gi|6119675|emb|CAB59486.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 41.94% |
Span: 183bp (24.5%) |
Frame: 1 |
| putative |
| Match: gi|78219625|gb|ABB38974.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 48.89% |
Span: 135bp (18.1%) |
Frame: 1 |
| twin-arginine |
| Match: gi|77997198|gb|ABB16097.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 37.33% |
Span: 222bp (29.7%) |
Frame: 1 |
| twin-arginine |
| Match: gi|50877510|emb|CAG37350.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 45.1% |
Span: 153bp (20.5%) |
Frame: 1 |
| related |
| Match: gi|71368222|ref|ZP_00658728.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 47.17% |
Span: 159bp (21.3%) |
Frame: 1 |
| sec-independent |
| Match: gi|94969706|ref|YP_591754.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 42% |
Span: 150bp (20.1%) |
Frame: 1 |
| sec-independent |
| Match: gi|16330067|ref|NP_440795.1| |
score: 52.4 |
e-value: 2e-05 |
Identity: 48.78% |
Span: 123bp (16.5%) |
Frame: 1 |
| gi|16330067|ref|NP_440795.1| hypothetical protein [Synechocystis sp. PCC 6803] gi|7444817|pir||S77372 hypothetical pr... |
| Match: gi|85860811|ref|YP_463013.1| |
score: 52.4 |
e-value: 2e-05 |
Identity: 35.94% |
Span: 192bp (25.7%) |
Frame: 1 |
| sec-independent |
| Match: gi|76558674|emb|CAI50266.1| |
score: 52.4 |
e-value: 2e-05 |
Identity: 31.52% |
Span: 246bp (32.9%) |
Frame: 1 |
| sec-independent |
| Match: gi|78171903|gb|ABB28999.1| |
score: 52.4 |
e-value: 2e-05 |
Identity: 41.54% |
Span: 195bp (26.1%) |
Frame: 1 |
| Twin-arginine |
| Match: gi|1480863|gb|AAB05810.1| |
score: 23.1 |
e-value: 8e-09 |
Identity: 75% |
Span: 24bp (3.2%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.8 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
| Match: gi|1480863|gb|AAB05810.1| |
score: 20.4 |
e-value: 8e-09 |
Identity: 71.43% |
Span: 21bp (2.8%) |
Frame: 3 |
| super |
|
| 176 lower scoring hits censored -- only 100 best hits are stored. |
