| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255569145|ref|XP_002525541.1| |
score: 403 |
e-value: 1e-115 |
Identity: 82.83% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] >gi223535120|gb|EEF36800.1| DNA-directed RNA pol... |
| Match: gi|225464023|ref|XP_002265454.1| |
score: 399 |
e-value: 1e-114 |
Identity: 83.26% |
Span: 699bp (94.8%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|224132576|ref|XP_002321356.1| |
score: 399 |
e-value: 2e-114 |
Identity: 83.69% |
Span: 699bp (94.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222868352|gb|EEF05483.1| predicted protein [Populus trichocarpa] |
| Match: gi|79529842|ref|NP_199327.4| |
score: 377 |
e-value: 4e-108 |
Identity: 75.41% |
Span: 699bp (94.8%) |
Frame: 2 |
| NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding [Arabidopsis thaliana] |
| Match: gi|9759599|dbj|BAB11387.1| |
score: 375 |
e-value: 2e-107 |
Identity: 76.82% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit [Arabidopsis thaliana] |
| Match: gi|168006293|ref|XP_001755844.1| |
score: 369 |
e-value: 2e-104 |
Identity: 76.5% |
Span: 699bp (94.8%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162693163|gb|EDQ79517.1| predicted protein [Physcomitrella... |
| Match: gi|29788820|gb|AAP03366.1| |
score: 367 |
e-value: 6e-104 |
Identity: 74.37% |
Span: 699bp (94.8%) |
Frame: 2 |
| putative RNA polymerase III [Oryza sativa Japonica Group] |
| Match: gi|115453445|ref|NP_001050323.1| |
score: 367 |
e-value: 6e-104 |
Identity: 74.37% |
Span: 699bp (94.8%) |
Frame: 2 |
| Os03g0403100 [Oryza sativa (japonica cultivar-group)] >gi108708688|gb|ABF96483.1| DNA-directed RNA polymerase III 130... |
| Match: gi|108708689|gb|ABF96484.1| |
score: 367 |
e-value: 6e-104 |
Identity: 74.37% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III 130 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|270251698|emb|CBI35069.1| |
score: 339 |
e-value: 2e-91 |
Identity: 80.79% |
Span: 609bp (82.6%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|242092386|ref|XP_002436683.1| |
score: 336 |
e-value: 1e-94 |
Identity: 69.75% |
Span: 699bp (94.8%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor] >gi241914906|gb|EER88050.1| hypothetical protein SORBIDRA... |
| Match: gi|147819200|emb|CAN62631.1| |
score: 336 |
e-value: 2e-90 |
Identity: 85.19% |
Span: 567bp (76.9%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|145341844|ref|XP_001416013.1| |
score: 314 |
e-value: 2e-87 |
Identity: 63.09% |
Span: 699bp (94.8%) |
Frame: 2 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144576236|gb|ABO94305.1| predicted protein [Ostreococcus luci... |
| Match: gi|116000835|emb|CAL50515.1| |
score: 312 |
e-value: 1e-86 |
Identity: 62.66% |
Span: 699bp (94.8%) |
Frame: 2 |
| RNA polymerase III subunit RPC2 (ISS) [Ostreococcus tauri] |
| Match: gi|9759599|dbj|BAB11387.1| |
score: 39.7 |
e-value: 2e-107 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit [Arabidopsis thaliana] |
| Match: gi|225464023|ref|XP_002265454.1| |
score: 39.7 |
e-value: 1e-114 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255569145|ref|XP_002525541.1| |
score: 39.7 |
e-value: 1e-115 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit, putative [Ricinus communis] >gi223535120|gb|EEF36800.1| DNA-directed RNA pol... |
| Match: gi|79529842|ref|NP_199327.4| |
score: 39.7 |
e-value: 4e-108 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding [Arabidopsis thaliana] |
| Match: gi|224132576|ref|XP_002321356.1| |
score: 39.7 |
e-value: 2e-114 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222868352|gb|EEF05483.1| predicted protein [Populus trichocarpa] |
| Match: gi|242092386|ref|XP_002436683.1| |
score: 36.6 |
e-value: 1e-94 |
Identity: 89.47% |
Span: 57bp (7.7%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_10g006995 [Sorghum bicolor] >gi241914906|gb|EER88050.1| hypothetical protein SORBIDRA... |
| Match: gi|29788820|gb|AAP03366.1| |
score: 36.6 |
e-value: 6e-104 |
Identity: 89.47% |
Span: 57bp (7.7%) |
Frame: 3 |
| putative RNA polymerase III [Oryza sativa Japonica Group] |
| Match: gi|168006293|ref|XP_001755844.1| |
score: 36.6 |
e-value: 2e-104 |
Identity: 84.21% |
Span: 57bp (7.7%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162693163|gb|EDQ79517.1| predicted protein [Physcomitrella... |
| Match: gi|108708689|gb|ABF96484.1| |
score: 36.6 |
e-value: 6e-104 |
Identity: 89.47% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III 130 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|115453445|ref|NP_001050323.1| |
score: 36.6 |
e-value: 6e-104 |
Identity: 89.47% |
Span: 57bp (7.7%) |
Frame: 3 |
| Os03g0403100 [Oryza sativa (japonica cultivar-group)] >gi108708688|gb|ABF96483.1| DNA-directed RNA polymerase III 130... |
| Match: gi|145341844|ref|XP_001416013.1| |
score: 33.9 |
e-value: 2e-87 |
Identity: 68.42% |
Span: 57bp (7.7%) |
Frame: 3 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144576236|gb|ABO94305.1| predicted protein [Ostreococcus luci... |
|
| 449 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 8 hits recorded |
| Match: At5G45140.1 |
score: 377 |
e-value: 3e-110 |
Identity: 75.41% |
Span: 699bp (94.8%) |
Frame: 2 |
| Symbols: NRPC2 | NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase | chr5:18264643-18274... |
| Match: At4G21710.1 |
score: 158 |
e-value: 5e-40 |
Identity: 38.71% |
Span: 699bp (94.8%) |
Frame: 2 |
| Symbols: EMB1989, RPB2, NRPB2 | NRPB2 (EMBRYO DEFECTIVE 1989); DNA binding | chr4:11535696-11542212 REVERSE |
| Match: At3G18090.1 |
score: 75.5 |
e-value: 3e-14 |
Identity: 26.43% |
Span: 669bp (90.8%) |
Frame: 2 |
| Symbols: NRPD2b | NRPD2b (nuclear RNA polymerase D 2b); DNA binding / DNA-directed RNA polymerase | chr3:6195329-620... |
| Match: At3G23780.1 |
score: 75.1 |
e-value: 4e-14 |
Identity: 27.31% |
Span: 669bp (90.8%) |
Frame: 2 |
| Symbols: DRD2, NRPD2, NRPD2a | NRPD2a (NUCLEAR RNA POLYMERASE D 2A); DNA binding / DNA-directed RNA polymerase | chr... |
| Match: At5G45140.1 |
score: 39.7 |
e-value: 3e-110 |
Identity: 94.74% |
Span: 57bp (7.7%) |
Frame: 3 |
| Symbols: NRPC2 | NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase | chr5:18264643-18274... |
| Match: At4G21710.1 |
score: 24.3 |
e-value: 5e-40 |
Identity: 60% |
Span: 45bp (6.1%) |
Frame: 3 |
| Symbols: EMB1989, RPB2, NRPB2 | NRPB2 (EMBRYO DEFECTIVE 1989); DNA binding | chr4:11535696-11542212 REVERSE |
| Match: At3G18090.1 |
score: 20.4 |
e-value: 3e-14 |
Identity: 53.33% |
Span: 45bp (6.1%) |
Frame: 3 |
| Symbols: NRPD2b | NRPD2b (nuclear RNA polymerase D 2b); DNA binding / DNA-directed RNA polymerase | chr3:6195329-620... |
| Match: At3G23780.1 |
score: 20.4 |
e-value: 4e-14 |
Identity: 53.33% |
Span: 45bp (6.1%) |
Frame: 3 |
| Symbols: DRD2, NRPD2, NRPD2a | NRPD2a (NUCLEAR RNA POLYMERASE D 2A); DNA binding / DNA-directed RNA polymerase | chr... |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q10233 |
score: 306 |
e-value: 8e-86 |
Identity: 60.52% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1 |
| Match: P22276 |
score: 303 |
e-value: 2e-83 |
Identity: 61.8% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2 |
| Match: Q9NW08 |
score: 288 |
e-value: 8e-79 |
Identity: 60.52% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens GN=POLR3B PE=1 SV=2 |
| Match: P59470 |
score: 285 |
e-value: 3e-78 |
Identity: 60.09% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus GN=Polr3b PE=2 SV=2 |
| Match: P25167 |
score: 280 |
e-value: 2e-75 |
Identity: 56.89% |
Span: 675bp (91.6%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster GN=RpIII128 PE=1 SV=2 |
| Match: Q54IZ9 |
score: 278 |
e-value: 2e-74 |
Identity: 57.21% |
Span: 687bp (93.2%) |
Frame: 2 |
| DNA-directed RNA polymerase III subunit rpc2 OS=Dictyostelium discoideum GN=polr3b PE=3 SV=1 |
| Match: Q8SR75 |
score: 168 |
e-value: 1e-42 |
Identity: 40.77% |
Span: 669bp (90.8%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1 |
| Match: P31814 |
score: 164 |
e-value: 4e-40 |
Identity: 39.62% |
Span: 630bp (85.5%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit B OS=Thermococcus celer GN=rpoB PE=3 SV=1 |
| Match: P30876 |
score: 162 |
e-value: 2e-40 |
Identity: 39.84% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens GN=POLR2B PE=1 SV=1 |
| Match: Q8CFI7 |
score: 162 |
e-value: 2e-40 |
Identity: 39.84% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus GN=Polr2b PE=2 SV=2 |
| Match: Q54J75 |
score: 160 |
e-value: 7e-40 |
Identity: 35.95% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1 |
| Match: P11513 |
score: 159 |
e-value: 4e-39 |
Identity: 38.21% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase subunit B OS=Sulfolobus acidocaldarius GN=rpoB PE=3 SV=2 |
| Match: P38420 |
score: 158 |
e-value: 6e-39 |
Identity: 38.71% |
Span: 699bp (94.8%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2 |
| Match: P08266 |
score: 155 |
e-value: 1e-37 |
Identity: 38.33% |
Span: 678bp (92.0%) |
Frame: 2 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila melanogaster GN=RpII140 PE=2 SV=2 |
| Match: Q10233 |
score: 32.7 |
e-value: 8e-86 |
Identity: 63.16% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1 |
| Match: P22276 |
score: 28.5 |
e-value: 2e-83 |
Identity: 52.63% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2 |
| Match: P59470 |
score: 28.1 |
e-value: 3e-78 |
Identity: 52.63% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Mus musculus GN=Polr3b PE=2 SV=2 |
| Match: Q9NW08 |
score: 27.7 |
e-value: 8e-79 |
Identity: 52.63% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Homo sapiens GN=POLR3B PE=1 SV=2 |
| Match: Q8SR75 |
score: 26.6 |
e-value: 1e-42 |
Identity: 45.45% |
Span: 66bp (9.0%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1 |
| Match: Q54J75 |
score: 25 |
e-value: 7e-40 |
Identity: 47.37% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1 |
| Match: P30876 |
score: 25 |
e-value: 2e-40 |
Identity: 47.37% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens GN=POLR2B PE=1 SV=1 |
| Match: Q8CFI7 |
score: 25 |
e-value: 2e-40 |
Identity: 47.37% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus GN=Polr2b PE=2 SV=2 |
| Match: P38420 |
score: 24.3 |
e-value: 6e-39 |
Identity: 60% |
Span: 45bp (6.1%) |
Frame: 3 |
| DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2 |
| Match: P25167 |
score: 24.3 |
e-value: 2e-75 |
Identity: 47.37% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster GN=RpIII128 PE=1 SV=2 |
| Match: P11513 |
score: 23.9 |
e-value: 4e-39 |
Identity: 47.37% |
Span: 57bp (7.7%) |
Frame: 3 |
| DNA-directed RNA polymerase subunit B OS=Sulfolobus acidocaldarius GN=rpoB PE=3 SV=2 |
|
| 34 lower scoring hits censored -- only 25 best hits are stored. |
