| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270241594|emb|CBI28814.1| |
score: 354 |
e-value: 6e-96 |
Identity: 77.68% |
Span: 669bp (91.0%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225447045|ref|XP_002269303.1| |
score: 354 |
e-value: 6e-96 |
Identity: 77.68% |
Span: 669bp (91.0%) |
Frame: 1 |
| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-contai... |
| Match: gi|255567695|ref|XP_002524826.1| |
score: 341 |
e-value: 4e-92 |
Identity: 73.78% |
Span: 672bp (91.4%) |
Frame: 1 |
| DNA repair helicase rad5,16, putative [Ricinus communis] >gi223535886|gb|EEF37546.1| DNA repair helicase rad5,16, put... |
| Match: gi|15220993|ref|NP_172004.1| |
score: 335 |
e-value: 3e-90 |
Identity: 70.89% |
Span: 705bp (95.9%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|2388586|gb|AAB71467.1| |
score: 301 |
e-value: 3e-80 |
Identity: 55.12% |
Span: 705bp (95.9%) |
Frame: 1 |
| Similar to Saccharomyces RAD16 (gbX78993) [Arabidopsis thaliana] |
| Match: gi|222637121|gb|EEE67253.1| |
score: 293 |
e-value: 2e-77 |
Identity: 60.98% |
Span: 732bp (99.6%) |
Frame: 1 |
| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] |
| Match: gi|115472329|ref|NP_001059763.1| |
score: 293 |
e-value: 2e-77 |
Identity: 60.98% |
Span: 732bp (99.6%) |
Frame: 1 |
| Os07g0511500 [Oryza sativa (japonica cultivar-group)] >gi113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonic... |
| Match: gi|50509490|dbj|BAD31171.1| |
score: 293 |
e-value: 2e-77 |
Identity: 60.98% |
Span: 732bp (99.6%) |
Frame: 1 |
| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] |
| Match: gi|242045780|ref|XP_002460761.1| |
score: 284 |
e-value: 7e-75 |
Identity: 63.39% |
Span: 669bp (91.0%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] >gi241924138|gb|EER97282.1| hypothetical protein SORBIDRA... |
| Match: gi|167887350|gb|ACA04915.1| |
score: 253 |
e-value: 1e-65 |
Identity: 56.1% |
Span: 726bp (98.8%) |
Frame: 1 |
| putative DEXH helicase-like repair protein [Solanum lycopersicum] |
| Match: gi|262110818|gb|EEY68870.1| |
score: 238 |
e-value: 4e-61 |
Identity: 50.88% |
Span: 669bp (91.0%) |
Frame: 1 |
| DNA repair protein, putative [Phytophthora infestans T30-4] |
| Match: gi|225444469|ref|XP_002267771.1| |
score: 226 |
e-value: 2e-57 |
Identity: 54.05% |
Span: 663bp (90.2%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|218199702|gb|EEC82129.1| |
score: 224 |
e-value: 9e-57 |
Identity: 62.7% |
Span: 552bp (75.1%) |
Frame: 1 |
| hypothetical protein OsI_26164 [Oryza sativa Indica Group] |
| Match: gi|270234618|emb|CBI23220.1| |
score: 211 |
e-value: 5e-53 |
Identity: 52.7% |
Span: 663bp (90.2%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|167516624|ref|XP_001742653.1| |
score: 207 |
e-value: 1e-51 |
Identity: 45.02% |
Span: 678bp (92.2%) |
Frame: 1 |
| hypothetical protein [Monosiga brevicollis MX1] >gi163779277|gb|EDQ92891.1| predicted protein [Monosiga brevicollis MX1] |
| Match: gi|224001126|ref|XP_002290235.1| |
score: 206 |
e-value: 1e-51 |
Identity: 46.67% |
Span: 669bp (91.0%) |
Frame: 1 |
| hypothetical protein THAPSDRAFT_268889 [Thalassiosira pseudonana CCMP1335] >gi220973657|gb|EED91987.1| hypothetical p... |
| Match: gi|9972383|gb|AAG10633.1|AC022521_11 |
score: 206 |
e-value: 3e-51 |
Identity: 55.81% |
Span: 642bp (87.3%) |
Frame: 1 |
| Similar nucleotide excision repair proteins [Arabidopsis thaliana] |
| Match: gi|219122221|ref|XP_002181449.1| |
score: 204 |
e-value: 6e-51 |
Identity: 47.01% |
Span: 669bp (91.0%) |
Frame: 1 |
| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi217407435|gb|EEC47372.1| predicted protein [Phaeodactylu... |
| Match: gi|71018359|ref|XP_759410.1| |
score: 197 |
e-value: 9e-49 |
Identity: 44.59% |
Span: 669bp (91.0%) |
Frame: 1 |
| hypothetical protein UM03263.1 [Ustilago maydis 521] >gi46098957|gb|EAK84190.1| hypothetical protein UM03263.1 [Ustil... |
| Match: gi|19075201|ref|NP_587701.1| |
score: 187 |
e-value: 7e-46 |
Identity: 43.72% |
Span: 672bp (91.4%) |
Frame: 1 |
| Rad16 homolog Rhp16 [Schizosaccharomyces pombe] >gi3647341|emb|CAA21065.1| Rad16 homolog Rhp16 [Schizosaccharomyces p... |
| Match: gi|14195095|sp|P79051.2|RHP16_SCHPO |
score: 187 |
e-value: 7e-46 |
Identity: 43.72% |
Span: 672bp (91.4%) |
Frame: 1 |
| RecName: Full=ATP-dependent helicase rhp16; AltName: Full=DNA repair protein rhp16; AltName: Full=RAD16 homolog |
| Match: gi|124807036|ref|XP_001350892.1| |
score: 184 |
e-value: 8e-45 |
Identity: 44.1% |
Span: 642bp (87.3%) |
Frame: 1 |
| DNA repair protein rhp16, putative [Plasmodium falciparum 3D7] >gi23497022|gb|AAN36572.1|AE014852_16 DNA repair prote... |
| Match: gi|213407960|ref|XP_002174751.1| |
score: 184 |
e-value: 1e-44 |
Identity: 42.61% |
Span: 672bp (91.4%) |
Frame: 1 |
| DNA repair protein RAD16 [Schizosaccharomyces japonicus yFS275] >gi212002798|gb|EEB08458.1| DNA repair protein RAD16 ... |
| Match: gi|82595847|ref|XP_726017.1| |
score: 181 |
e-value: 9e-44 |
Identity: 43.67% |
Span: 642bp (87.3%) |
Frame: 1 |
| nucleotide excision repair protein [Plasmodium yoelii yoelii str. 17XNL] >gi23481248|gb|EAA17582.1| similar nucleotid... |
| Match: gi|239871392|gb|EER01388.1| |
score: 180 |
e-value: 1e-43 |
Identity: 41.87% |
Span: 672bp (91.4%) |
Frame: 1 |
| DNA repair helicase, putative [Perkinsus marinus ATCC 50983] |
|
| 201 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 9 hits recorded |
| Match: At1G05120.1 |
score: 335 |
e-value: 2e-92 |
Identity: 70.89% |
Span: 705bp (95.9%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At1G02670.1 |
score: 114 |
e-value: 8e-26 |
Identity: 57.27% |
Span: 330bp (44.9%) |
Frame: 1 |
| DNA repair protein, putative | chr1:576046-580299 FORWARD |
| Match: At1G61140.1 |
score: 103 |
e-value: 1e-22 |
Identity: 41.91% |
Span: 375bp (51.0%) |
Frame: 1 |
| Symbols: EDA16 | EDA16 (embryo sac development arrest 16); ATP binding / DNA binding / helicase/ protein binding / z... |
| Match: At1G50410.1 |
score: 100 |
e-value: 1e-21 |
Identity: 32.08% |
Span: 666bp (90.6%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At5G43530.1 |
score: 96.3 |
e-value: 2e-20 |
Identity: 30.7% |
Span: 546bp (74.3%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr5:1... |
| Match: At3G20010.1 |
score: 94 |
e-value: 8e-20 |
Identity: 37.42% |
Span: 408bp (55.5%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:6... |
| Match: At5G22750.1 |
score: 88.6 |
e-value: 4e-18 |
Identity: 27.24% |
Span: 663bp (90.2%) |
Frame: 1 |
| Symbols: RAD5 | RAD5; ATP binding / DNA binding / helicase/ protein binding / zinc ion binding | chr5:7565377-757087... |
| Match: At1G11100.1 |
score: 82.8 |
e-value: 2e-16 |
Identity: 32.44% |
Span: 630bp (85.7%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related | chr1:3703934-370... |
| Match: At3G16600.1 |
score: 66.2 |
e-value: 2e-11 |
Identity: 33.33% |
Span: 333bp (45.3%) |
Frame: 1 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr3:5... |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: P79051 |
score: 187 |
e-value: 5e-47 |
Identity: 43.72% |
Span: 672bp (91.4%) |
Frame: 1 |
| ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2 |
| Match: P31244 |
score: 170 |
e-value: 8e-42 |
Identity: 40% |
Span: 669bp (91.0%) |
Frame: 1 |
| DNA repair protein RAD16 OS=Saccharomyces cerevisiae GN=RAD16 PE=1 SV=1 |
| Match: Q9FIY7 |
score: 96.3 |
e-value: 2e-19 |
Identity: 30.7% |
Span: 546bp (74.3%) |
Frame: 1 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 OS=Arab... |
| Match: Q9FNI6 |
score: 88.6 |
e-value: 4e-17 |
Identity: 27.24% |
Span: 663bp (90.2%) |
Frame: 1 |
| Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 OS=Arab... |
| Match: Q6PCN7 |
score: 83.6 |
e-value: 1e-15 |
Identity: 30.69% |
Span: 546bp (74.3%) |
Frame: 1 |
| Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1 SV=1 |
| Match: Q14527 |
score: 82 |
e-value: 4e-15 |
Identity: 30.69% |
Span: 546bp (74.3%) |
Frame: 1 |
| Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1 SV=2 |
| Match: Q95216 |
score: 79 |
e-value: 3e-14 |
Identity: 30.39% |
Span: 546bp (74.3%) |
Frame: 1 |
| Helicase-like transcription factor OS=Oryctolagus cuniculus GN=HLTF PE=1 SV=1 |
| Match: O60177 |
score: 72.4 |
e-value: 3e-12 |
Identity: 29.26% |
Span: 624bp (84.9%) |
Frame: 1 |
| Uncharacterized ATP-dependent helicase C23E6.02 OS=Schizosaccharomyces pombe GN=SPBC23E6.02 PE=2 SV=1 |
|
