| genbank/nr [blastx] | Showing best 82 hits recorded |
| Match: gi|157353215|emb|CAO45138.1| |
score: 281 |
e-value: 5e-74 |
Identity: 70.26% |
Span: 585bp (80.6%) |
Frame: 2 |
| unnamed |
| Match: gi|147799285|emb|CAN76999.1| |
score: 280 |
e-value: 6e-74 |
Identity: 69.74% |
Span: 585bp (80.6%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|60390594|sp|Q9LG26|PARN_ARATH |
score: 264 |
e-value: 4e-69 |
Identity: 63.59% |
Span: 585bp (80.6%) |
Frame: 2 |
| Poly(A)-specific |
| Match: gi|42562770|ref|NP_175983.2| |
score: 264 |
e-value: 4e-69 |
Identity: 63.59% |
Span: 585bp (80.6%) |
Frame: 2 |
| gi|42562770|ref|NP_175983.2| CAF1 family ribonuclease [Arabidopsis thaliana] |
| Match: gi|8778305|gb|AAF79314.1|AC002304_7 |
score: 225 |
e-value: 3e-57 |
Identity: 56.41% |
Span: 585bp (80.6%) |
Frame: 2 |
| F14J16.11 [Arabidopsis thaliana] |
| Match: gi|168026131|ref|XP_001765586.1| |
score: 190 |
e-value: 8e-47 |
Identity: 49.21% |
Span: 573bp (78.9%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162683224|gb|EDQ69636.1| predicted protein [Physcomitrella... |
| Match: gi|116309728|emb|CAH66773.1| |
score: 180 |
e-value: 8e-44 |
Identity: 48.19% |
Span: 579bp (79.8%) |
Frame: 2 |
| OSIGBa0115M15.11 [Oryza sativa (indica cultivar-group)] |
| Match: gi|116310355|emb|CAH67368.1| |
score: 177 |
e-value: 7e-43 |
Identity: 47.67% |
Span: 579bp (79.8%) |
Frame: 2 |
| OSIGBa0128P10.2 [Oryza sativa (indica cultivar-group)] |
| Match: gi|78484343|dbj|BAE47488.1| |
score: 144 |
e-value: 7e-33 |
Identity: 72.73% |
Span: 264bp (36.4%) |
Frame: 2 |
| polyA specific ribonuclease [Arabidopsis thaliana] |
| Match: gi|57834081|emb|CAE05998.4| |
score: 139 |
e-value: 2e-31 |
Identity: 38.86% |
Span: 579bp (79.8%) |
Frame: 2 |
| OSJNBa0016O02.8 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15230837|ref|NP_189170.1| |
score: 132 |
e-value: 3e-29 |
Identity: 37.37% |
Span: 585bp (80.6%) |
Frame: 2 |
| CAF1 family ribonuclease [Arabidopsis thaliana] >gi75162449|sp|Q8W4C3.1|PARNL_ARATH RecName: Full=Poly(A)-specific ri... |
| Match: gi|9279724|dbj|BAB01314.1| |
score: 132 |
e-value: 3e-29 |
Identity: 37.37% |
Span: 585bp (80.6%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|218201212|gb|EEC83639.1| |
score: 131 |
e-value: 6e-29 |
Identity: 38.62% |
Span: 564bp (77.7%) |
Frame: 2 |
| hypothetical protein OsI_29373 [Oryza sativa Indica Group] |
| Match: gi|115476612|ref|NP_001061902.1| |
score: 131 |
e-value: 6e-29 |
Identity: 38.62% |
Span: 564bp (77.7%) |
Frame: 2 |
| Os08g0440200 [Oryza sativa (japonica cultivar-group)] >gi113623871|dbj|BAF23816.1| Os08g0440200 [Oryza sativa Japonic... |
| Match: gi|156388175|ref|XP_001634577.1| |
score: 111 |
e-value: 5e-23 |
Identity: 36.88% |
Span: 480bp (66.1%) |
Frame: 2 |
| predicted protein [Nematostella vectensis] >gi156221661|gb|EDO42514.1| predicted protein [Nematostella vectensis] |
| Match: gi|156351496|ref|XP_001622538.1| |
score: 110 |
e-value: 1e-22 |
Identity: 37.58% |
Span: 471bp (64.9%) |
Frame: 2 |
| hypothetical protein NEMVEDRAFT_v1g1365 [Nematostella vectensis] >gi156209100|gb|EDO30438.1| predicted protein [Nemat... |
| Match: gi|41055217|ref|NP_957382.1| |
score: 103 |
e-value: 1e-20 |
Identity: 36.99% |
Span: 426bp (58.7%) |
Frame: 2 |
| gi|41055217|ref|NP_957382.1| similar to poly(A)-specific ribonuclease (deadenylation nuclease) [Danio rerio] gi|29791... |
| Match: gi|37681897|gb|AAQ97826.1| |
score: 103 |
e-value: 1e-20 |
Identity: 36.99% |
Span: 426bp (58.7%) |
Frame: 2 |
| gi|37681897|gb|AAQ97826.1| poly(A)-specific ribonuclease [Danio rerio] |
| Match: gi|60390548|sp|Q7ZU92|PARN_DANRE |
score: 103 |
e-value: 1e-20 |
Identity: 36.99% |
Span: 426bp (58.7%) |
Frame: 2 |
| RecName: |
| Match: gi|198418498|ref|XP_002129059.1| |
score: 100 |
e-value: 1e-19 |
Identity: 38.41% |
Span: 411bp (56.6%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|148236825|ref|NP_001081143.1| |
score: 100 |
e-value: 1e-19 |
Identity: 33.33% |
Span: 462bp (63.6%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|49115955|gb|AAH73682.1| |
score: 100 |
e-value: 1e-19 |
Identity: 33.33% |
Span: 462bp (63.6%) |
Frame: 2 |
| gi|49115955|gb|AAH73682.1| Unknown (protein for IMAGE:5572400) [Xenopus laevis] |
| Match: gi|60390587|sp|Q90ZA1|PARN_XENLA |
score: 100 |
e-value: 1e-19 |
Identity: 33.33% |
Span: 462bp (63.6%) |
Frame: 2 |
| Poly(A)-specific |
| Match: gi|219506903|ref|XP_002249512.1| |
score: 99.8 |
e-value: 2e-19 |
Identity: 33.93% |
Span: 489bp (67.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|125603551|gb|EAZ42876.1| |
score: 99.8 |
e-value: 2e-19 |
Identity: 38.46% |
Span: 387bp (53.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|115530723|emb|CAL49352.1| |
score: 99.4 |
e-value: 2e-19 |
Identity: 35% |
Span: 414bp (57.0%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|197246532|gb|AAI69159.1| |
score: 99.4 |
e-value: 2e-19 |
Identity: 35% |
Span: 414bp (57.0%) |
Frame: 2 |
| Unknown |
| Match: gi|219455804|ref|XP_002225633.1| |
score: 99.4 |
e-value: 2e-19 |
Identity: 34.52% |
Span: 489bp (67.4%) |
Frame: 2 |
| hypothetical |
| Match: gi|125590680|gb|EAZ31030.1| |
score: 98.6 |
e-value: 4e-19 |
Identity: 50.49% |
Span: 300bp (41.3%) |
Frame: 2 |
| hypothetical |
| Match: gi|218195015|gb|EEC77442.1| |
score: 98.6 |
e-value: 4e-19 |
Identity: 50.49% |
Span: 300bp (41.3%) |
Frame: 2 |
| hypothetical protein OsI_16244 [Oryza sativa Indica Group] |
| Match: gi|73958883|ref|XP_536966.2| |
score: 98.2 |
e-value: 5e-19 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| gi|73958883|ref|XP_536966.2| PREDICTED: similar to poly(A)-specific ribonuclease (deadenylation nuclease) isoform 1 [... |
| Match: gi|85544056|pdb|2A1R|A |
score: 98.2 |
e-value: 5e-19 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| Chain |
| Match: gi|4505611|ref|NP_002573.1| |
score: 98.2 |
e-value: 5e-19 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| gi|4505611|ref|NP_002573.1| poly(A)-specific ribonuclease (deadenylation nuclease); deadenylation nuclease [Homo sapi... |
| Match: gi|155371965|ref|NP_001094588.1| |
score: 97.8 |
e-value: 7e-19 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|149725913|ref|XP_001490195.1| |
score: 97.8 |
e-value: 7e-19 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|47218930|emb|CAF98128.1| |
score: 97.4 |
e-value: 9e-19 |
Identity: 34.75% |
Span: 417bp (57.4%) |
Frame: 2 |
| gi|47218930|emb|CAF98128.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|145495491|ref|XP_001433738.1| |
score: 97.1 |
e-value: 1e-18 |
Identity: 36.23% |
Span: 414bp (57.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|126334897|ref|XP_001375777.1| |
score: 96.3 |
e-value: 2e-18 |
Identity: 35.42% |
Span: 420bp (57.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|156548166|ref|XP_001607788.1| |
score: 95.9 |
e-value: 3e-18 |
Identity: 36.96% |
Span: 414bp (57.0%) |
Frame: 2 |
| PREDICTED: similar to LOC524155 protein [Nasonia vitripennis] |
| Match: gi|212506937|gb|EEB10997.1| |
score: 95.5 |
e-value: 4e-18 |
Identity: 35.19% |
Span: 480bp (66.1%) |
Frame: 2 |
| poly |
| Match: gi|189240485|ref|XP_967921.2| |
score: 95.5 |
e-value: 4e-18 |
Identity: 36.76% |
Span: 408bp (56.2%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|197102834|ref|NP_001125357.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 34.03% |
Span: 426bp (58.7%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|66499479|ref|XP_392167.2| |
score: 94.4 |
e-value: 8e-18 |
Identity: 35.66% |
Span: 429bp (59.1%) |
Frame: 2 |
| gi|66499479|ref|XP_392167.2| PREDICTED: similar to poly(A)-specific ribonuclease [Apis mellifera] |
| Match: gi|109487699|ref|XP_340741.3| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|149042528|gb|EDL96165.1| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| rCG49798 |
| Match: gi|109489573|ref|XP_001075629.1| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|74141205|dbj|BAE35913.1| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| unnamed |
| Match: gi|148664948|gb|EDK97364.1| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|21311877|ref|NP_083037.1| |
score: 91.7 |
e-value: 5e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|60390578|sp|Q8VDG3|PARN_MOUSE |
score: 91.3 |
e-value: 7e-17 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| Poly(A)-specific |
| Match: gi|195999750|ref|XP_002109743.1| |
score: 90.9 |
e-value: 9e-17 |
Identity: 29.53% |
Span: 558bp (76.9%) |
Frame: 2 |
| hypothetical |
| Match: gi|119605517|gb|EAW85111.1| |
score: 90.9 |
e-value: 9e-17 |
Identity: 32.88% |
Span: 426bp (58.7%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|114661114|ref|XP_510832.2| |
score: 90.1 |
e-value: 1e-16 |
Identity: 36.22% |
Span: 375bp (51.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|78484000|dbj|BAE47489.1| |
score: 89 |
e-value: 3e-16 |
Identity: 54.32% |
Span: 243bp (33.5%) |
Frame: 2 |
| polyA specific ribonuclease [Arabidopsis thaliana] |
| Match: gi|78484002|dbj|BAE47490.1| |
score: 89 |
e-value: 3e-16 |
Identity: 54.32% |
Span: 243bp (33.5%) |
Frame: 2 |
| gi|78484002|dbj|BAE47490.1| polyA specific ribonuclease [Arabidopsis thaliana] |
| Match: gi|145325441|ref|NP_001077725.1| |
score: 89 |
e-value: 3e-16 |
Identity: 54.32% |
Span: 243bp (33.5%) |
Frame: 2 |
| AHG2/ATPARN |
| Match: gi|149610539|ref|XP_001516344.1| |
score: 89 |
e-value: 3e-16 |
Identity: 30.99% |
Span: 420bp (57.9%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|157118661|ref|XP_001659202.1| |
score: 88.6 |
e-value: 4e-16 |
Identity: 36.76% |
Span: 408bp (56.2%) |
Frame: 2 |
| poly(a)-specific |
| Match: gi|168019851|ref|XP_001762457.1| |
score: 87.4 |
e-value: 1e-15 |
Identity: 31.16% |
Span: 555bp (76.4%) |
Frame: 2 |
| predicted |
| Match: gi|158285726|ref|XP_308433.4| |
score: 85.1 |
e-value: 5e-15 |
Identity: 33.78% |
Span: 414bp (57.0%) |
Frame: 2 |
| polyA-specific |
| Match: gi|193624798|ref|XP_001946252.1| |
score: 84.7 |
e-value: 6e-15 |
Identity: 31.88% |
Span: 414bp (57.0%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|156384950|ref|XP_001633395.1| |
score: 83.6 |
e-value: 1e-14 |
Identity: 35.04% |
Span: 408bp (56.2%) |
Frame: 2 |
| predicted |
| Match: gi|215499948|gb|EEC09442.1| |
score: 82.4 |
e-value: 3e-14 |
Identity: 32.84% |
Span: 402bp (55.4%) |
Frame: 2 |
| conserved |
| Match: gi|212509602|gb|EEB12963.1| |
score: 78.2 |
e-value: 6e-13 |
Identity: 29.71% |
Span: 414bp (57.0%) |
Frame: 2 |
| poly |
| Match: gi|110761732|ref|XP_623432.2| |
score: 78.2 |
e-value: 6e-13 |
Identity: 32.26% |
Span: 372bp (51.2%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|21751916|dbj|BAC04070.1| |
score: 78.2 |
e-value: 6e-13 |
Identity: 34.97% |
Span: 417bp (57.4%) |
Frame: 2 |
| gi|21751916|dbj|BAC04070.1| unnamed protein product [Homo sapiens] |
| Match: gi|114610057|ref|XP_001151114.1| |
score: 77.8 |
e-value: 8e-13 |
Identity: 34.27% |
Span: 417bp (57.4%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|194382480|dbj|BAG64410.1| |
score: 77.8 |
e-value: 8e-13 |
Identity: 30.56% |
Span: 426bp (58.7%) |
Frame: 2 |
| unnamed |
| Match: gi|71665029|ref|XP_819489.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 29.56% |
Span: 456bp (62.8%) |
Frame: 2 |
| ribonuclease |
| Match: gi|71413865|ref|XP_809055.1| |
score: 76.6 |
e-value: 2e-12 |
Identity: 29.56% |
Span: 456bp (62.8%) |
Frame: 2 |
| ribonuclease |
| Match: gi|71043644|ref|NP_001020895.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 33.57% |
Span: 417bp (57.4%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|149027455|gb|EDL83045.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 33.57% |
Span: 417bp (57.4%) |
Frame: 2 |
| rCG44902 |
| Match: gi|198278452|ref|NP_001030038.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 33.57% |
Span: 417bp (57.4%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|148670093|gb|EDL02040.1| |
score: 75.9 |
e-value: 3e-12 |
Identity: 33.57% |
Span: 417bp (57.4%) |
Frame: 2 |
| mCG121400, |
| Match: gi|14388565|dbj|BAB60801.1| |
score: 75.5 |
e-value: 4e-12 |
Identity: 34.31% |
Span: 399bp (55.0%) |
Frame: 2 |
| gi|14388565|dbj|BAB60801.1| hypothetical protein [Macaca fascicularis] |
| Match: gi|73946208|ref|XP_541182.2| |
score: 75.5 |
e-value: 4e-12 |
Identity: 33.11% |
Span: 432bp (59.5%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|148670094|gb|EDL02041.1| |
score: 75.1 |
e-value: 5e-12 |
Identity: 34.31% |
Span: 399bp (55.0%) |
Frame: 2 |
| mCG121400, |
| Match: gi|157331106|emb|CAO63160.1| |
score: 74.7 |
e-value: 6e-12 |
Identity: 36.94% |
Span: 333bp (45.9%) |
Frame: 2 |
| unnamed |
| Match: gi|71894805|ref|NP_001025800.1| |
score: 73.9 |
e-value: 1e-11 |
Identity: 40.96% |
Span: 249bp (34.3%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|118349638|ref|XP_001008100.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 24.54% |
Span: 489bp (67.4%) |
Frame: 2 |
| CAF1 |
| Match: gi|197333695|ref|NP_001127949.1| |
score: 72 |
e-value: 4e-11 |
Identity: 39.76% |
Span: 249bp (34.3%) |
Frame: 2 |
| poly(A)-specific |
| Match: gi|115385711|ref|XP_001209402.1| |
score: 71.2 |
e-value: 7e-11 |
Identity: 30.22% |
Span: 417bp (57.4%) |
Frame: 2 |
| conserved |
|
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At1G55870.1 |
score: 264 |
e-value: 3e-71 |
Identity: 63.59% |
Span: 585bp (80.6%) |
Frame: 2 |
| Symbols: ATPARN, AHG2 | AHG2/ATPARN; ribonuclease | chr1:20899329-20901710 FORWARD |
| Match: At3G25430.1 |
score: 132 |
e-value: 2e-31 |
Identity: 37.37% |
Span: 585bp (80.6%) |
Frame: 2 |
| CAF1 family ribonuclease | chr3:9222441-9224937 FORWARD |
| Match: At1G55870.2 |
score: 89 |
e-value: 3e-18 |
Identity: 54.32% |
Span: 243bp (33.5%) |
Frame: 2 |
| Symbols: ATPARN, AHG2 | AHG2/ATPARN | chr1:20899850-20901710 FORWARD |
|
| swissprot [blastx] | Showing best 6 hits recorded |
| Match: Q9LG26 |
score: 264 |
e-value: 3e-70 |
Identity: 63.59% |
Span: 585bp (80.6%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Arabidopsis thaliana GN=PARN PE=1 SV=2 |
| Match: Q7ZU92 |
score: 103 |
e-value: 7e-22 |
Identity: 36.99% |
Span: 426bp (58.7%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Danio rerio GN=parn PE=1 SV=2 |
| Match: Q90ZA1 |
score: 100 |
e-value: 1e-20 |
Identity: 33.33% |
Span: 462bp (63.6%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Xenopus laevis GN=parn PE=1 SV=1 |
| Match: O95453 |
score: 98.2 |
e-value: 4e-20 |
Identity: 34.72% |
Span: 426bp (58.7%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Homo sapiens GN=PARN PE=1 SV=1 |
| Match: Q5RC51 |
score: 95.1 |
e-value: 3e-19 |
Identity: 34.03% |
Span: 426bp (58.7%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Pongo abelii GN=PARN PE=2 SV=1 |
| Match: Q8VDG3 |
score: 91.3 |
e-value: 5e-18 |
Identity: 32.64% |
Span: 426bp (58.7%) |
Frame: 2 |
| Poly(A)-specific ribonuclease PARN OS=Mus musculus GN=Parn PE=1 SV=1 |
|