| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|167887350|gb|ACA04915.1| |
score: 112 |
e-value: 1e-40 |
Identity: 74.32% |
Span: 222bp (30.6%) |
Frame: 2 |
| putative DEXH helicase-like repair protein [Solanum lycopersicum] |
| Match: gi|2388586|gb|AAB71467.1| |
score: 90.5 |
e-value: 5e-27 |
Identity: 63.51% |
Span: 213bp (29.4%) |
Frame: 3 |
| Similar to Saccharomyces RAD16 (gbX78993) [Arabidopsis thaliana] |
| Match: gi|15220993|ref|NP_172004.1| |
score: 90.5 |
e-value: 5e-31 |
Identity: 63.51% |
Span: 213bp (29.4%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|270241594|emb|CBI28814.1| |
score: 84.7 |
e-value: 8e-31 |
Identity: 58.33% |
Span: 213bp (29.4%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224128974|ref|XP_002320469.1| |
score: 84.7 |
e-value: 3e-15 |
Identity: 56.94% |
Span: 213bp (29.4%) |
Frame: 3 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222861242|gb|EEE98784.1| chromatin remodeling complex s... |
| Match: gi|225447045|ref|XP_002269303.1| |
score: 84.7 |
e-value: 8e-31 |
Identity: 58.33% |
Span: 213bp (29.4%) |
Frame: 3 |
| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-contai... |
| Match: gi|255567695|ref|XP_002524826.1| |
score: 84.3 |
e-value: 5e-32 |
Identity: 56.94% |
Span: 213bp (29.4%) |
Frame: 3 |
| DNA repair helicase rad5,16, putative [Ricinus communis] >gi223535886|gb|EEF37546.1| DNA repair helicase rad5,16, put... |
| Match: gi|167887350|gb|ACA04915.1| |
score: 80.1 |
e-value: 1e-40 |
Identity: 79.59% |
Span: 144bp (19.9%) |
Frame: 3 |
| putative DEXH helicase-like repair protein [Solanum lycopersicum] |
| Match: gi|255567695|ref|XP_002524826.1| |
score: 79.7 |
e-value: 5e-32 |
Identity: 52.63% |
Span: 225bp (31.0%) |
Frame: 2 |
| DNA repair helicase rad5,16, putative [Ricinus communis] >gi223535886|gb|EEF37546.1| DNA repair helicase rad5,16, put... |
| Match: gi|270241594|emb|CBI28814.1| |
score: 75.5 |
e-value: 8e-31 |
Identity: 55.07% |
Span: 201bp (27.7%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225447045|ref|XP_002269303.1| |
score: 75.5 |
e-value: 8e-31 |
Identity: 55.07% |
Span: 201bp (27.7%) |
Frame: 2 |
| PREDICTED: similar to SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-contai... |
| Match: gi|222637121|gb|EEE67253.1| |
score: 70.9 |
e-value: 8e-23 |
Identity: 47.44% |
Span: 225bp (31.0%) |
Frame: 2 |
| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] |
| Match: gi|115472329|ref|NP_001059763.1| |
score: 70.9 |
e-value: 8e-23 |
Identity: 47.44% |
Span: 225bp (31.0%) |
Frame: 2 |
| Os07g0511500 [Oryza sativa (japonica cultivar-group)] >gi113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonic... |
| Match: gi|50509490|dbj|BAD31171.1| |
score: 70.9 |
e-value: 8e-23 |
Identity: 47.44% |
Span: 225bp (31.0%) |
Frame: 2 |
| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] |
| Match: gi|15220993|ref|NP_172004.1| |
score: 70.5 |
e-value: 5e-31 |
Identity: 51.47% |
Span: 201bp (27.7%) |
Frame: 2 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein [Arabidop... |
| Match: gi|242045780|ref|XP_002460761.1| |
score: 65.9 |
e-value: 3e-20 |
Identity: 50% |
Span: 207bp (28.6%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] >gi241924138|gb|EER97282.1| hypothetical protein SORBIDRA... |
| Match: gi|50509490|dbj|BAD31171.1| |
score: 62.4 |
e-value: 8e-23 |
Identity: 47.22% |
Span: 213bp (29.4%) |
Frame: 3 |
| putative DNA repair protein rhp16 [Oryza sativa Japonica Group] |
| Match: gi|115472329|ref|NP_001059763.1| |
score: 62.4 |
e-value: 8e-23 |
Identity: 47.22% |
Span: 213bp (29.4%) |
Frame: 3 |
| Os07g0511500 [Oryza sativa (japonica cultivar-group)] >gi113611299|dbj|BAF21677.1| Os07g0511500 [Oryza sativa Japonic... |
| Match: gi|222637121|gb|EEE67253.1| |
score: 62.4 |
e-value: 8e-23 |
Identity: 47.22% |
Span: 213bp (29.4%) |
Frame: 3 |
| hypothetical protein OsJ_24412 [Oryza sativa Japonica Group] |
| Match: gi|9972383|gb|AAG10633.1|AC022521_11 |
score: 61.2 |
e-value: 8e-15 |
Identity: 52.46% |
Span: 180bp (24.8%) |
Frame: 2 |
| Similar nucleotide excision repair proteins [Arabidopsis thaliana] |
| Match: gi|15217826|ref|NP_171767.1| |
score: 61.2 |
e-value: 8e-15 |
Identity: 52.46% |
Span: 180bp (24.8%) |
Frame: 2 |
| DNA repair protein, putative [Arabidopsis thaliana] |
| Match: gi|242045780|ref|XP_002460761.1| |
score: 58.5 |
e-value: 3e-20 |
Identity: 45.83% |
Span: 213bp (29.4%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_02g034440 [Sorghum bicolor] >gi241924138|gb|EER97282.1| hypothetical protein SORBIDRA... |
| Match: gi|2388586|gb|AAB71467.1| |
score: 57 |
e-value: 5e-27 |
Identity: 38.04% |
Span: 201bp (27.7%) |
Frame: 2 |
| Similar to Saccharomyces RAD16 (gbX78993) [Arabidopsis thaliana] |
| Match: gi|15217826|ref|NP_171767.1| |
score: 45.1 |
e-value: 8e-15 |
Identity: 54.76% |
Span: 126bp (17.4%) |
Frame: 3 |
| DNA repair protein, putative [Arabidopsis thaliana] |
| Match: gi|224128974|ref|XP_002320469.1| |
score: 23.1 |
e-value: 3e-15 |
Identity: 58.33% |
Span: 36bp (5.0%) |
Frame: 2 |
| chromatin remodeling complex subunit [Populus trichocarpa] >gi222861242|gb|EEE98784.1| chromatin remodeling complex s... |
|
| 19 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At1G05120.1 |
score: 90.5 |
e-value: 2e-33 |
Identity: 63.51% |
Span: 213bp (29.4%) |
Frame: 3 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At1G05120.1 |
score: 70.5 |
e-value: 2e-33 |
Identity: 51.47% |
Span: 201bp (27.7%) |
Frame: 2 |
| SNF2 domain-containing protein / helicase domain-containing protein / RING finger domain-containing protein | chr1:1... |
| Match: At1G02670.1 |
score: 61.2 |
e-value: 4e-17 |
Identity: 52.46% |
Span: 180bp (24.8%) |
Frame: 2 |
| DNA repair protein, putative | chr1:576046-580299 FORWARD |
| Match: At1G02670.1 |
score: 45.1 |
e-value: 4e-17 |
Identity: 54.76% |
Span: 126bp (17.4%) |
Frame: 3 |
| DNA repair protein, putative | chr1:576046-580299 FORWARD |
|
| swissprot [blastx] | Showing best 2 hits recorded |
| Match: P79051 |
score: 50.4 |
e-value: 1e-13 |
Identity: 36.92% |
Span: 192bp (26.5%) |
Frame: 2 |
| ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2 |
| Match: P79051 |
score: 47.8 |
e-value: 1e-13 |
Identity: 37.33% |
Span: 216bp (29.8%) |
Frame: 3 |
| ATP-dependent helicase rhp16 OS=Schizosaccharomyces pombe GN=rhp16 PE=2 SV=2 |
|
