| genbank/nr [blastx] | Showing best 58 hits recorded |
| Match: gi|15218790|ref|NP_171835.1| |
score: 233.8 |
e-value: 1.7e-60 |
Identity: 64.13% |
Span: 549bp (76.0%) |
Frame: 2 |
| ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease [Arabidopsis thaliana] >gi3850568... |
| Match: gi|21741863|emb|CAD41453.1| |
score: 231.5 |
e-value: 8.7e-60 |
Identity: 68.33% |
Span: 537bp (74.4%) |
Frame: 2 |
| gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|19113896|ref|NP_592984.1| |
score: 137.9 |
e-value: 1.3e-31 |
Identity: 42.86% |
Span: 483bp (66.9%) |
Frame: 2 |
| gi|19113896|ref|NP_592984.1| conserved hypothetical protein [Schizosaccharomyces pombe] gi|1175376|sp|Q09704|RRP4_SCH... |
| Match: gi|20378673|gb|AAM20932.1| |
score: 135.2 |
e-value: 8.5e-31 |
Identity: 50.35% |
Span: 420bp (58.2%) |
Frame: 2 |
| gi|20378673|gb|AAM20932.1| exonuclease [Phytophthora sojae] |
| Match: gi|21450259|ref|NP_659135.1| |
score: 124.8 |
e-value: 1.1e-27 |
Identity: 43.71% |
Span: 501bp (69.4%) |
Frame: 2 |
| gi|21450259|ref|NP_659135.1| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exoribonuclease [Mus musculus]... |
| Match: gi|6321860|ref|NP_011936.1| |
score: 122.9 |
e-value: 4.3e-27 |
Identity: 42.57% |
Span: 444bp (61.5%) |
Frame: 2 |
| gi|6321860|ref|NP_011936.1| Ribosomal RNA Processing; Rrp4p [Saccharomyces cerevisiae] gi|731671|sp|P38792|RRP4_YEAST... |
| Match: gi|19923403|ref|NP_055100.2| |
score: 120.6 |
e-value: 2.2e-26 |
Identity: 43.11% |
Span: 501bp (69.4%) |
Frame: 2 |
| gi|19923403|ref|NP_055100.2| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exorib [Homo sapiens] gi|13878... |
| Match: gi|32405430|ref|XP_323328.1| |
score: 118.2 |
e-value: 5.1e-30 |
Identity: 46.51% |
Span: 372bp (51.5%) |
Frame: 2 |
| gi|32405430|ref|XP_323328.1| hypothetical protein [Neurospora crassa] gi|28918718|gb|EAA28388.1| hypothetical protein... |
| Match: gi|21741863|emb|CAD41453.1| |
score: 117.9 |
e-value: 1.4e-25 |
Identity: 83.08% |
Span: 195bp (27.0%) |
Frame: 1 |
| gi|21741863|emb|CAD41453.1| OSJNBa0019D11.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21428348|gb|AAM49834.1| |
score: 117.5 |
e-value: 1.8e-25 |
Identity: 42.18% |
Span: 432bp (59.8%) |
Frame: 2 |
| gi|21428348|gb|AAM49834.1| GM02257p [Drosophila melanogaster] |
| Match: gi|24762324|ref|NP_611807.1| |
score: 117.5 |
e-value: 1.8e-25 |
Identity: 42.18% |
Span: 432bp (59.8%) |
Frame: 2 |
| gi|24762324|ref|NP_611807.1| CG3931-PA [Drosophila melanogaster] gi|7291605|gb|AAF47028.1| CG3931-PA [Drosophila mela... |
| Match: gi|38111572|gb|EAA57131.1| |
score: 116.3 |
e-value: 6.3e-27 |
Identity: 43.9% |
Span: 363bp (50.3%) |
Frame: 2 |
| gi|38111572|gb|EAA57131.1| hypothetical protein MG08100.4 [Magnaporthe grisea 70-15] |
| Match: gi|31200969|ref|XP_309432.1| |
score: 108.6 |
e-value: 8.5e-23 |
Identity: 39.38% |
Span: 480bp (66.5%) |
Frame: 2 |
| gi|31200969|ref|XP_309432.1| ENSANGP00000011203 [Anopheles gambiae] gi|21293139|gb|EAA05284.1| ENSANGP00000011203 [An... |
| Match: gi|15218790|ref|NP_171835.1| |
score: 107.8 |
e-value: 1.4e-22 |
Identity: 72.31% |
Span: 195bp (27.0%) |
Frame: 1 |
| ATRRP4 (ARABIDOPSIS THALIANA RIBOSOMAL RNA PROCESSING 4); RNA binding / exonuclease [Arabidopsis thaliana] >gi3850568... |
| Match: gi|34853693|ref|XP_345337.1| |
score: 98.6 |
e-value: 7.5e-32 |
Identity: 44.83% |
Span: 348bp (48.2%) |
Frame: 2 |
| gi|34853693|ref|XP_345337.1| similar to Homolog of Yeast RRP4 (ribosomal RNA processing 4), 3-5-exoribonuclease [Ratt... |
| Match: gi|14250901|emb|CAC39255.1| |
score: 95.13 |
e-value: 2.9e-27 |
Identity: 46% |
Span: 300bp (41.6%) |
Frame: 2 |
| gi|14250901|emb|CAC39255.1| Rrp4p homologue [Trypanosoma brucei] |
| Match: gi|19074743|ref|NP_586249.1| |
score: 94.74 |
e-value: 8.3e-27 |
Identity: 36.15% |
Span: 387bp (53.6%) |
Frame: 2 |
| gi|19074743|ref|NP_586249.1| similarity to HYPOTHETICAL PROTEIN YAZE_SCHPO [Encephalitozoon cuniculi] gi|19069385|emb... |
| Match: gi|17544090|ref|NP_500978.1| |
score: 89.74 |
e-value: 2.2e-34 |
Identity: 39.25% |
Span: 321bp (44.5%) |
Frame: 2 |
| gi|17544090|ref|NP_500978.1| homolog of Yeast rrp4 like (34.1 kD) (4H181) [Caenorhabditis elegans] gi|14574491|gb|AAK... |
| Match: gi|17544090|ref|NP_500978.1| |
score: 78.57 |
e-value: 2.2e-34 |
Identity: 57.89% |
Span: 171bp (23.7%) |
Frame: 1 |
| gi|17544090|ref|NP_500978.1| homolog of Yeast rrp4 like (34.1 kD) (4H181) [Caenorhabditis elegans] gi|14574491|gb|AAK... |
| Match: gi|29248172|gb|EAA39713.1| |
score: 78.18 |
e-value: 1.2e-20 |
Identity: 34.15% |
Span: 366bp (50.7%) |
Frame: 2 |
| gi|29248172|gb|EAA39713.1| GLP_741_57068_56280 [Giardia lamblia ATCC 50803] |
| Match: gi|23489830|gb|EAA21746.1| |
score: 77.8 |
e-value: 3.3e-21 |
Identity: 37.5% |
Span: 336bp (46.5%) |
Frame: 2 |
| gi|23489830|gb|EAA21746.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|23510093|ref|NP_702759.1| |
score: 76.64 |
e-value: 1.6e-20 |
Identity: 34.82% |
Span: 336bp (46.5%) |
Frame: 2 |
| gi|23510093|ref|NP_702759.1| exosome complex exonuclease rrp4, putative [Plasmodium falciparum 3D7] gi|6562740|emb|CA... |
| Match: gi|514266|gb|AAB60392.1| |
score: 73.17 |
e-value: 3.9e-12 |
Identity: 32.93% |
Span: 501bp (69.4%) |
Frame: 2 |
| gi|514266|gb|AAB60392.1| unknown [Homo sapiens] |
| Match: gi|24762324|ref|NP_611807.1| |
score: 63.93 |
e-value: 2.4e-09 |
Identity: 57.14% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|24762324|ref|NP_611807.1| CG3931-PA [Drosophila melanogaster] gi|7291605|gb|AAF47028.1| CG3931-PA [Drosophila mela... |
| Match: gi|21428348|gb|AAM49834.1| |
score: 63.93 |
e-value: 2.4e-09 |
Identity: 57.14% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|21428348|gb|AAM49834.1| GM02257p [Drosophila melanogaster] |
| Match: gi|31200969|ref|XP_309432.1| |
score: 62.77 |
e-value: 5.3e-09 |
Identity: 53.57% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|31200969|ref|XP_309432.1| ENSANGP00000011203 [Anopheles gambiae] gi|21293139|gb|EAA05284.1| ENSANGP00000011203 [An... |
| Match: gi|34853693|ref|XP_345337.1| |
score: 61.23 |
e-value: 7.5e-32 |
Identity: 50% |
Span: 183bp (25.3%) |
Frame: 1 |
| gi|34853693|ref|XP_345337.1| similar to Homolog of Yeast RRP4 (ribosomal RNA processing 4), 3-5-exoribonuclease [Ratt... |
| Match: gi|21450259|ref|NP_659135.1| |
score: 60.85 |
e-value: 2e-08 |
Identity: 50% |
Span: 183bp (25.3%) |
Frame: 1 |
| gi|21450259|ref|NP_659135.1| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exoribonuclease [Mus musculus]... |
| Match: gi|19923403|ref|NP_055100.2| |
score: 60.46 |
e-value: 2.6e-08 |
Identity: 51.79% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|19923403|ref|NP_055100.2| homolog of Yeast RRP4 (ribosomal RNA processing 4), 3'-5'-exorib [Homo sapiens] gi|13878... |
| Match: gi|514266|gb|AAB60392.1| |
score: 60.46 |
e-value: 2.6e-08 |
Identity: 51.79% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|514266|gb|AAB60392.1| unknown [Homo sapiens] |
| Match: gi|20378673|gb|AAM20932.1| |
score: 59.69 |
e-value: 4.5e-08 |
Identity: 50.88% |
Span: 171bp (23.7%) |
Frame: 1 |
| gi|20378673|gb|AAM20932.1| exonuclease [Phytophthora sojae] |
| Match: gi|19113896|ref|NP_592984.1| |
score: 58.54 |
e-value: 1e-07 |
Identity: 49.15% |
Span: 177bp (24.5%) |
Frame: 1 |
| gi|19113896|ref|NP_592984.1| conserved hypothetical protein [Schizosaccharomyces pombe] gi|1175376|sp|Q09704|RRP4_SCH... |
| Match: gi|18977941|ref|NP_579298.1| |
score: 55.07 |
e-value: 1.1e-06 |
Identity: 28.7% |
Span: 324bp (44.9%) |
Frame: 2 |
| gi|18977941|ref|NP_579298.1| hypothetical protein PF1569 [Pyrococcus furiosus DSM 3638] gi|29336821|sp|Q8U0L8|ECR1_PY... |
| Match: gi|11498103|ref|NP_069328.1| |
score: 53.91 |
e-value: 1.9e-07 |
Identity: 27.61% |
Span: 363bp (50.3%) |
Frame: 2 |
| gi|11498103|ref|NP_069328.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] gi|29336577|sp|O29758|E... |
| Match: gi|21228724|ref|NP_634646.1| |
score: 52.37 |
e-value: 7.2e-06 |
Identity: 32.05% |
Span: 234bp (32.4%) |
Frame: 2 |
| gi|21228724|ref|NP_634646.1| hypothetical protein [Methanosarcina mazei Goe1] gi|29336796|sp|Q8PTT9|ECR1_METMA Probab... |
| Match: gi|15678711|ref|NP_275827.1| |
score: 51.22 |
e-value: 1.6e-05 |
Identity: 30.77% |
Span: 234bp (32.4%) |
Frame: 2 |
| gi|15678711|ref|NP_275827.1| conserved protein [Methanothermobacter thermautotrophicus] gi|29336574|sp|O26780|ECR1_ME... |
| Match: gi|6321860|ref|NP_011936.1| |
score: 51.22 |
e-value: 1.6e-05 |
Identity: 42.86% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|6321860|ref|NP_011936.1| Ribosomal RNA Processing; Rrp4p [Saccharomyces cerevisiae] gi|731671|sp|P38792|RRP4_YEAST... |
| Match: gi|14520825|ref|NP_126300.1| |
score: 50.83 |
e-value: 2.1e-05 |
Identity: 28.57% |
Span: 315bp (43.6%) |
Frame: 2 |
| gi|14520825|ref|NP_126300.1| hypothetical protein [Pyrococcus abyssi] gi|29337011|sp|Q9V120|ECR1_PYRAB Probable exoso... |
| Match: gi|14250901|emb|CAC39255.1| |
score: 49.29 |
e-value: 2.9e-27 |
Identity: 51.72% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|14250901|emb|CAC39255.1| Rrp4p homologue [Trypanosoma brucei] |
| Match: gi|20090628|ref|NP_616703.1| |
score: 48.52 |
e-value: 0.0001 |
Identity: 26.43% |
Span: 420bp (58.2%) |
Frame: 2 |
| gi|20090628|ref|NP_616703.1| RNA-binding protein [Methanosarcina acetivorans str. C2A] gi|29336814|sp|Q8TPX7|ECR1_MET... |
| Match: gi|14591334|ref|NP_143412.1| |
score: 48.14 |
e-value: 0.00014 |
Identity: 27.62% |
Span: 315bp (43.6%) |
Frame: 2 |
| gi|14591334|ref|NP_143412.1| hypothetical protein PH1551 [Pyrococcus horikoshii] gi|29336583|sp|O59221|ECR1_PYRHO Pro... |
| Match: gi|19074743|ref|NP_586249.1| |
score: 48.14 |
e-value: 8.3e-27 |
Identity: 45.61% |
Span: 171bp (23.7%) |
Frame: 1 |
| gi|19074743|ref|NP_586249.1| similarity to HYPOTHETICAL PROTEIN YAZE_SCHPO [Encephalitozoon cuniculi] gi|19069385|emb... |
| Match: gi|20093820|ref|NP_613667.1| |
score: 46.59 |
e-value: 0.0004 |
Identity: 28.04% |
Span: 321bp (44.5%) |
Frame: 2 |
| gi|20093820|ref|NP_613667.1| Predicted exosome subunit, RNA-binding protein Rrp4 (contain S1 domain and KH domain) [M... |
| Match: gi|23489830|gb|EAA21746.1| |
score: 46.21 |
e-value: 3.3e-21 |
Identity: 38.33% |
Span: 180bp (24.9%) |
Frame: 1 |
| gi|23489830|gb|EAA21746.1| hypothetical protein [Plasmodium yoelii yoelii] |
| Match: gi|23510093|ref|NP_702759.1| |
score: 45.05 |
e-value: 1.6e-20 |
Identity: 36.67% |
Span: 180bp (24.9%) |
Frame: 1 |
| gi|23510093|ref|NP_702759.1| exosome complex exonuclease rrp4, putative [Plasmodium falciparum 3D7] gi|6562740|emb|CA... |
| Match: gi|23050358|ref|ZP_00077282.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 28.21% |
Span: 234bp (32.4%) |
Frame: 2 |
| gi|23050358|ref|ZP_00077282.1| COG1097: RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domai... |
| Match: gi|29248172|gb|EAA39713.1| |
score: 43.9 |
e-value: 1.2e-20 |
Identity: 41.51% |
Span: 159bp (22.0%) |
Frame: 1 |
| gi|29248172|gb|EAA39713.1| GLP_741_57068_56280 [Giardia lamblia ATCC 50803] |
| Match: gi|16082285|ref|NP_394746.1| |
score: 43.51 |
e-value: 0.001 |
Identity: 22.07% |
Span: 396bp (54.8%) |
Frame: 2 |
| gi|16082285|ref|NP_394746.1| conserved hypothetical protein [Thermoplasma acidophilum] gi|29336950|sp|Q9HIP3|ECR1_THE... |
| Match: gi|22406214|ref|ZP_00001066.1| |
score: 42.74 |
e-value: 7.3e-05 |
Identity: 22.92% |
Span: 282bp (39.1%) |
Frame: 2 |
| gi|22406214|ref|ZP_00001066.1| COG1097: RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domai... |
| Match: gi|13541137|ref|NP_110825.1| |
score: 41.97 |
e-value: 0.003 |
Identity: 22.13% |
Span: 327bp (45.3%) |
Frame: 2 |
| gi|13541137|ref|NP_110825.1| 3'-5' exoribonuclease (Rrp4-related) [Thermoplasma volcanium] gi|29336900|sp|Q97BZ6|ECR1... |
| Match: gi|18313179|ref|NP_559846.1| |
score: 40.82 |
e-value: 0.022 |
Identity: 25.47% |
Span: 318bp (44.0%) |
Frame: 2 |
| gi|18313179|ref|NP_559846.1| conserved hypothetical protein [Pyrobaculum aerophilum] gi|29336867|sp|Q8ZVM8|ECR1_PYRAE... |
| Match: gi|15920656|ref|NP_376325.1| |
score: 40.43 |
e-value: 0.028 |
Identity: 32.84% |
Span: 198bp (27.4%) |
Frame: 2 |
| gi|15920656|ref|NP_376325.1| 247aa long conserved hypothetical protein [Sulfolobus tokodaii] gi|29336895|sp|Q975G7|EC... |
| Match: gi|32405430|ref|XP_323328.1| |
score: 35.42 |
e-value: 5.1e-30 |
Identity: 31.88% |
Span: 183bp (25.3%) |
Frame: 1 |
| gi|32405430|ref|XP_323328.1| hypothetical protein [Neurospora crassa] gi|28918718|gb|EAA28388.1| hypothetical protein... |
| Match: gi|38111572|gb|EAA57131.1| |
score: 26.95 |
e-value: 6.3e-27 |
Identity: 23.26% |
Span: 183bp (25.3%) |
Frame: 1 |
| gi|38111572|gb|EAA57131.1| hypothetical protein MG08100.4 [Magnaporthe grisea 70-15] |
| Match: gi|22406214|ref|ZP_00001066.1| |
score: 25.79 |
e-value: 7.3e-05 |
Identity: 26.23% |
Span: 168bp (23.3%) |
Frame: 1 |
| gi|22406214|ref|ZP_00001066.1| COG1097: RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domai... |
| Match: gi|11498103|ref|NP_069328.1| |
score: 23.48 |
e-value: 1.9e-07 |
Identity: 25% |
Span: 144bp (19.9%) |
Frame: 1 |
| gi|11498103|ref|NP_069328.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] gi|29336577|sp|O29758|E... |
| Match: gi|16082285|ref|NP_394746.1| |
score: 21.17 |
e-value: 0.001 |
Identity: 63.64% |
Span: 33bp (4.6%) |
Frame: 1 |
| gi|16082285|ref|NP_394746.1| conserved hypothetical protein [Thermoplasma acidophilum] gi|29336950|sp|Q9HIP3|ECR1_THE... |
| Match: gi|13541137|ref|NP_110825.1| |
score: 21.17 |
e-value: 0.003 |
Identity: 63.64% |
Span: 33bp (4.6%) |
Frame: 1 |
| gi|13541137|ref|NP_110825.1| 3'-5' exoribonuclease (Rrp4-related) [Thermoplasma volcanium] gi|29336900|sp|Q97BZ6|ECR1... |
|
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1g03360.1 |
score: 233.8 |
e-value: 6.2e-62 |
Identity: 64.13% |
Span: 549bp (76.0%) |
Frame: 2 |
| At1g03360.1 68408.m00282 expressed protein Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharo... |
| Match: At1g03360.1 |
score: 107.8 |
e-value: 5.1e-24 |
Identity: 72.31% |
Span: 195bp (27.0%) |
Frame: 1 |
| At1g03360.1 68408.m00282 expressed protein Similar to hypothetical protein SPAC2F7.14c gi|1052797 from Schizosaccharo... |
|
