| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|15242547|ref|NP_196554.1| |
score: 236.9 |
e-value: 2e-61 |
Identity: 84.44% |
Span: 405bp (56.6%) |
Frame: 1 |
| NRPB4; DNA-directed RNA polymerase [Arabidopsis thaliana] >gi2760362|gb|AAB95261.1| 15.9 kDa subunit of RNA polymeras... |
| Match: gi|34878674|ref|XP_344660.1| |
score: 101.7 |
e-value: 1e-20 |
Identity: 38.35% |
Span: 399bp (55.8%) |
Frame: 1 |
| gi|34878674|ref|XP_344660.1| similar to RIKEN cDNA 2610028L19 [Rattus norvegicus] |
| Match: gi|4758574|ref|NP_004796.1| |
score: 101.7 |
e-value: 1e-20 |
Identity: 38.35% |
Span: 399bp (55.8%) |
Frame: 1 |
| DNA-directed RNA polymerase II subunit RPB4 [Homo sapiens] >gi21312246|ref|NP_081278.1| DNA-directed RNA polymerase I... |
| Match: gi|17533967|ref|NP_495544.1| |
score: 97.83 |
e-value: 1.5e-19 |
Identity: 40% |
Span: 399bp (55.8%) |
Frame: 1 |
| gi|17533967|ref|NP_495544.1| RNA polymerase II (2H665) [Caenorhabditis elegans] gi|14589816|gb|AAC71124.2| Hypothetic... |
| Match: gi|7503310|pir||T34046 |
score: 95.13 |
e-value: 9.5e-19 |
Identity: 39.26% |
Span: 399bp (55.8%) |
Frame: 1 |
| gi|7503310|pir||T34046 hypothetical protein F43E2.1 - Caenorhabditis elegans |
| Match: gi|27263229|gb|AAN88031.1| |
score: 88.97 |
e-value: 6.8e-17 |
Identity: 40.83% |
Span: 360bp (50.3%) |
Frame: 1 |
| gi|27263229|gb|AAN88031.1| RNA polymerase II accessory factor rpb4 [Drosophila melanogaster] gi|27263231|gb|AAN88032.... |
| Match: gi|31242991|ref|XP_321930.1| |
score: 86.66 |
e-value: 3.4e-16 |
Identity: 34.13% |
Span: 378bp (52.9%) |
Frame: 1 |
| gi|31242991|ref|XP_321930.1| ENSANGP00000009867 [Anopheles gambiae] gi|21289499|gb|EAA01792.1| ENSANGP00000009867 [An... |
| Match: gi|28076931|ref|NP_081377.1| |
score: 84.34 |
e-value: 1.7e-15 |
Identity: 37.04% |
Span: 324bp (45.3%) |
Frame: 1 |
| gi|28076931|ref|NP_081377.1| RIKEN cDNA 2610028L19 [Mus musculus] gi|13435942|gb|AAH04810.1| RIKEN cDNA 2610028L19 [M... |
| Match: gi|24647897|ref|NP_732315.1| |
score: 80.88 |
e-value: 1.8e-14 |
Identity: 36.52% |
Span: 345bp (48.3%) |
Frame: 1 |
| gi|24647897|ref|NP_732315.1| CG31237-PA [Drosophila melanogaster] gi|23171619|gb|AAF55522.3| CG31237-PA [Drosophila m... |
| Match: gi|19112207|ref|NP_595415.1| |
score: 65.47 |
e-value: 8e-10 |
Identity: 30.08% |
Span: 399bp (55.8%) |
Frame: 1 |
| gi|19112207|ref|NP_595415.1| dna-directed rna polymerase subunit [Schizosaccharomyces pombe] gi|9297039|sp|O74825|RPB... |
| Match: gi|23490125|gb|EAA21975.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 32.58% |
Span: 393bp (55.0%) |
Frame: 1 |
| gi|23490125|gb|EAA21975.1| RNA polymerase Rpb4 [Plasmodium yoelii yoelii] |
| Match: gi|38081983|ref|XP_112084.2| |
score: 60.85 |
e-value: 2e-08 |
Identity: 33.6% |
Span: 375bp (52.4%) |
Frame: 1 |
| gi|38081983|ref|XP_112084.2| similar to RIKEN cDNA 2610028L19 [Mus musculus] |
| Match: gi|28188691|gb|AAN46271.1| |
score: 57 |
e-value: 2.9e-07 |
Identity: 36.99% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi28188695|gb|AAN46273.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|28188687|gb|AAN46269.1| |
score: 55.84 |
e-value: 6.4e-07 |
Identity: 35.62% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi28188689|gb|AAN46270.1| unknown protein [Arabidopsis thaliana] >gi|28188697... |
| Match: gi|28188699|gb|AAN46275.1| |
score: 55.84 |
e-value: 6.4e-07 |
Identity: 35.62% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|28188683|gb|AAN46267.1| |
score: 55.84 |
e-value: 6.4e-07 |
Identity: 35.62% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|28188685|gb|AAN46268.1| |
score: 55.84 |
e-value: 6.4e-07 |
Identity: 35.62% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] >gi28188693|gb|AAN46272.1| unknown protein [Arabidopsis thaliana] |
| Match: gi|28188681|gb|AAN46266.1| |
score: 55.84 |
e-value: 6.4e-07 |
Identity: 35.62% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|38104135|gb|EAA50749.1| |
score: 53.53 |
e-value: 3.2e-06 |
Identity: 28.68% |
Span: 384bp (53.7%) |
Frame: 1 |
| gi|38104135|gb|EAA50749.1| hypothetical protein MG04508.4 [Magnaporthe grisea 70-15] |
| Match: gi|16804948|ref|NP_472977.1| |
score: 53.14 |
e-value: 4.1e-06 |
Identity: 27.56% |
Span: 378bp (52.9%) |
Frame: 1 |
| gi|16804948|ref|NP_472977.1| DNA-directed RNA polymerase II 16 kDa subunit, putative [Plasmodium falciparum 3D7] gi|7... |
| Match: gi|32423265|ref|XP_332070.1| |
score: 53.14 |
e-value: 4.1e-06 |
Identity: 26.36% |
Span: 384bp (53.7%) |
Frame: 1 |
| gi|32423265|ref|XP_332070.1| hypothetical protein [Neurospora crassa] gi|28925563|gb|EAA34588.1| hypothetical protein... |
| Match: gi|6322321|ref|NP_012395.1| |
score: 52.37 |
e-value: 7e-06 |
Identity: 26.26% |
Span: 297bp (41.5%) |
Frame: 1 |
| gi|6322321|ref|NP_012395.1| fourth-largest subunit of RNA polymerase II; Rpb4p [Saccharomyces cerevisiae] gi|133336|s... |
| Match: gi|34810556|pdb|1PQV|D |
score: 52.37 |
e-value: 7e-06 |
Identity: 26.26% |
Span: 297bp (41.5%) |
Frame: 1 |
| gi|34810556|pdb|1PQV|D Chain D, Rna Polymerase Ii-Tfiis Complex |
| Match: gi|19173403|ref|NP_597206.1| |
score: 52.37 |
e-value: 7e-06 |
Identity: 31.07% |
Span: 309bp (43.2%) |
Frame: 1 |
| gi|19173403|ref|NP_597206.1| DNA-DIRECTED RNA POLYMERASE II 16KDA POLYPEPTIDE [Encephalitozoon cuniculi] gi|19170992|... |
| Match: gi|28188703|gb|AAN46277.1| |
score: 51.22 |
e-value: 1.6e-05 |
Identity: 32.88% |
Span: 219bp (30.6%) |
Frame: 1 |
| unknown protein [Arabidopsis lyrata] >gi28188705|gb|AAN46278.1| unknown protein [Arabidopsis lyrata] |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5g09920.1 |
score: 236.9 |
e-value: 7.2e-63 |
Identity: 84.44% |
Span: 405bp (56.6%) |
Frame: 1 |
| At5g09920.1 68412.m01060 15.9 kDa subunit of RNA polymerase II (gb|AAB95261.1) |
|
