genbank/nr [blastx] | Showing best 100 hits recorded |
Match: gi|45680441|gb|AAS75242.1| |
score: 160.6 |
e-value: 2.2e-38 |
Identity: 51.76% |
Span: 417bp (58.4%) |
Frame: -1 |
gi|45680441|gb|AAS75242.1| 'contains similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00076' [Or... |
Match: gi|15233246|ref|NP_191094.1| |
score: 158.7 |
e-value: 8.5e-38 |
Identity: 50% |
Span: 423bp (59.2%) |
Frame: -1 |
PHIP1 (PHRAGMOPLASTIN INTERACTING PROTEIN 1); RNA binding / mRNA binding [Arabidopsis thaliana] >gi7019667|emb|CAB757... |
Match: gi|18026763|gb|AAL55607.1| |
score: 141.4 |
e-value: 1.4e-32 |
Identity: 45.06% |
Span: 423bp (59.2%) |
Frame: -1 |
gi|18026763|gb|AAL55607.1| phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana] |
Match: gi|25446691|gb|AAN74838.1| |
score: 82.03 |
e-value: 1e-14 |
Identity: 46.99% |
Span: 249bp (34.9%) |
Frame: -1 |
gi|25446691|gb|AAN74838.1| Unknown protein [Oryza sativa (japonica cultivar-group)] |
Match: gi|19114443|ref|NP_593531.1| |
score: 67.4 |
e-value: 2.6e-10 |
Identity: 36.67% |
Span: 267bp (37.4%) |
Frame: -1 |
gi|19114443|ref|NP_593531.1| gar2 protein [Schizosaccharomyces pombe] gi|6226864|sp|P41891|GAR2_SCHPO Protein gar2 gi... |
Match: gi|2130461|pir||S55785 |
score: 67.4 |
e-value: 2.6e-10 |
Identity: 36.67% |
Span: 267bp (37.4%) |
Frame: -1 |
gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast (Schizosaccharomyces pombe) gi|663262|emb|CAA88179.1| g... |
Match: gi|38051913|gb|AAH60394.1| |
score: 66.24 |
e-value: 5.8e-10 |
Identity: 36.26% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|38051913|gb|AAH60394.1| Unknown (protein for MGC:68480) [Xenopus laevis] |
Match: gi|45387799|ref|NP_991258.1| |
score: 59.69 |
e-value: 5.4e-08 |
Identity: 34.94% |
Span: 249bp (34.9%) |
Frame: -1 |
gi|45387799|ref|NP_991258.1| hypothetical protein zgc:77282 [Danio rerio] >gi|41388912|gb|AAH65640.1| Hypothetical pr... |
Match: gi|436226|dbj|BAA05063.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|436226|dbj|BAA05063.1| KIAA0038 [Homo sapiens] |
Match: gi|41472304|gb|AAS07439.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|41472304|gb|AAS07439.1| unknown [Homo sapiens] |
Match: gi|41472305|gb|AAS07440.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|41472305|gb|AAS07440.1| unknown [Homo sapiens] |
Match: gi|4972951|gb|AAD34860.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|4972951|gb|AAD34860.1| Wbscr1 alternative spliced product [Mus musculus] gi|15928652|gb|AAH14796.1| Wbscr1 protein... |
Match: gi|11559923|ref|NP_071496.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|11559923|ref|NP_071496.1| eukaryotic translation initiation factor 4H isoform 1 [Homo sapiens] gi|18276665|sp|Q150... |
Match: gi|39104480|dbj|BAC65476.3| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|39104480|dbj|BAC65476.3| mKIAA0038 protein [Mus musculus] |
Match: gi|14702180|ref|NP_114381.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|14702180|ref|NP_114381.1| eukaryotic translation initiation factor 4H isoform 2 [Homo sapiens] gi|8469175|gb|AAF75... |
Match: gi|34871862|ref|XP_213755.2| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|34871862|ref|XP_213755.2| similar to Wbscr1 [Rattus norvegicus] gi|34873326|ref|XP_347155.1| similar to Wbscr1 [Ra... |
Match: gi|15808988|ref|NP_291039.1| |
score: 58.54 |
e-value: 1.2e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|15808988|ref|NP_291039.1| Williams-Beuren syndrome chromosome region 1 homolog [Mus musculus] gi|15214055|sp|Q9WUK... |
Match: gi|41147756|ref|XP_374414.1| |
score: 57.77 |
e-value: 2.1e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|41147756|ref|XP_374414.1| similar to mKIAA0038 protein [Homo sapiens] |
Match: gi|42657870|ref|XP_376587.1| |
score: 57.77 |
e-value: 2.1e-07 |
Identity: 32.97% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|42657870|ref|XP_376587.1| similar to mKIAA0038 protein [Homo sapiens] |
Match: gi|38016127|ref|NP_055829.1| |
score: 57.38 |
e-value: 2.7e-07 |
Identity: 37.89% |
Span: 282bp (39.5%) |
Frame: -1 |
gi|38016127|ref|NP_055829.1| KIAA0117 protein [Homo sapiens] gi|20809545|gb|AAH29451.1| KIAA0117 protein [Homo sapiens] |
Match: gi|46115998|ref|XP_384017.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.36% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1] >gi|42548700|gb|EAA71543.1| hypoth... |
Match: gi|35493822|ref|NP_909129.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
Match: gi|21314767|ref|NP_149105.2| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 27.86% |
Span: 414bp (58.0%) |
Frame: -1 |
gi|21314767|ref|NP_149105.2| MADP-1 protein [Homo sapiens] gi|18490399|gb|AAH22543.1| MADP-1 protein [Homo sapiens] |
Match: gi|38344339|emb|CAD41755.2| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 29.41% |
Span: 432bp (60.5%) |
Frame: -1 |
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa (japonica cultivar-group)] |
Match: gi|34365067|emb|CAE45890.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
Match: gi|31873732|emb|CAD97833.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
Match: gi|35493817|ref|NP_909125.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
Match: gi|4757926|ref|NP_004893.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|4757926|ref|NP_004893.1| RNA-binding region containing protein 2 isoform b; splicing factor CC1.3; coactivator of ... |
Match: gi|34860256|ref|XP_342558.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
Match: gi|13278367|gb|AAH04000.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus] |
Match: gi|35493811|ref|NP_909122.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
Match: gi|18875412|ref|NP_573505.1| |
score: 55.84 |
e-value: 7.8e-07 |
Identity: 36.17% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
Match: gi|39593884|emb|CAE62177.1| |
score: 55.45 |
e-value: 1e-06 |
Identity: 26.72% |
Span: 387bp (54.2%) |
Frame: -1 |
gi|39593884|emb|CAE62177.1| Hypothetical protein CBG06224 [Caenorhabditis briggsae] |
Match: gi|17230269|ref|NP_486817.1| |
score: 55.45 |
e-value: 1e-06 |
Identity: 35.87% |
Span: 267bp (37.4%) |
Frame: -1 |
gi|17230269|ref|NP_486817.1| RNA binding protein [Nostoc sp. PCC 7120] gi|25386588|pir||AB2153 RNA binding protein [i... |
Match: gi|7446360|pir||T09108 |
score: 55.45 |
e-value: 1e-06 |
Identity: 37.04% |
Span: 237bp (33.2%) |
Frame: -1 |
gi|7446360|pir||T09108 RNA binding protein, 24K, chloroplast - spinach (fragment) gi|1015370|gb|AAA79045.1| 24 kDa RN... |
Match: gi|15231912|ref|NP_187457.1| |
score: 55.45 |
e-value: 1e-06 |
Identity: 37.8% |
Span: 234bp (32.8%) |
Frame: -1 |
RNA-binding protein, putative [Arabidopsis thaliana] >gi6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protei... |
Match: gi|21313088|ref|NP_080301.1| |
score: 55.07 |
e-value: 1.3e-06 |
Identity: 29.01% |
Span: 387bp (54.2%) |
Frame: -1 |
zinc finger CCHC-type and RNA binding motif 1 [Mus musculus] >gi81916891|sp|Q9CZ96.1|ZCRB1_MOUSE RecName: Full=Zinc f... |
Match: gi|34867757|ref|XP_343321.1| |
score: 55.07 |
e-value: 1.3e-06 |
Identity: 29.01% |
Span: 387bp (54.2%) |
Frame: -1 |
gi|34867757|ref|XP_343321.1| similar to MADP-1 protein [Rattus norvegicus] |
Match: gi|7446357|pir||T06817 |
score: 55.07 |
e-value: 1.3e-06 |
Identity: 42.11% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|7446357|pir||T06817 RNA-binding protein - garden pea gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum] ... |
Match: gi|49107074|ref|XP_411487.1| |
score: 55.07 |
e-value: 1.3e-06 |
Identity: 32.97% |
Span: 270bp (37.8%) |
Frame: -1 |
gi|49107074|ref|XP_411487.1| hypothetical protein AN7350.2 [Aspergillus nidulans FGSC A4] >gi|40742531|gb|EAA61721.1|... |
Match: gi|1666299|emb|CAA63557.1| |
score: 55.07 |
e-value: 1.3e-06 |
Identity: 36.05% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|1666299|emb|CAA63557.1| RNA-binding protein [Anabaena variabilis] |
Match: gi|31207923|ref|XP_312928.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 33.72% |
Span: 249bp (34.9%) |
Frame: -1 |
gi|31207923|ref|XP_312928.1| ENSANGP00000014747 [Anopheles gambiae] gi|30177221|gb|EAA08322.2| ENSANGP00000014747 [An... |
Match: gi|33873902|gb|AAH10177.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 29.01% |
Span: 387bp (54.2%) |
Frame: -1 |
gi|33873902|gb|AAH10177.1| MADP-1 protein [Homo sapiens] |
Match: gi|14211667|dbj|BAB56132.1| |
score: 54.68 |
e-value: 1.7e-06 |
Identity: 29.01% |
Span: 387bp (54.2%) |
Frame: -1 |
gi|14211667|dbj|BAB56132.1| MADP-1 protein [Homo sapiens] |
Match: gi|49114983|gb|AAH72838.1| |
score: 54.3 |
e-value: 2.3e-06 |
Identity: 29.17% |
Span: 285bp (39.9%) |
Frame: -1 |
LOC443584 protein [Xenopus laevis] |
Match: gi|47222076|emb|CAG12102.1| |
score: 54.3 |
e-value: 2.3e-06 |
Identity: 30.53% |
Span: 387bp (54.2%) |
Frame: -1 |
unnamed protein product [Tetraodon nigroviridis] |
Match: gi|4803739|dbj|BAA77512.1| |
score: 53.91 |
e-value: 3e-06 |
Identity: 39.33% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis] |
Match: gi|21700195|dbj|BAC02896.1| |
score: 53.91 |
e-value: 3e-06 |
Identity: 35.9% |
Span: 231bp (32.4%) |
Frame: -1 |
tobacco nucleolin [Nicotiana tabacum] |
Match: gi|21430048|gb|AAM50702.1| |
score: 53.53 |
e-value: 3.9e-06 |
Identity: 29.71% |
Span: 411bp (57.6%) |
Frame: -1 |
gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster] |
Match: gi|32403860|ref|XP_322543.1| |
score: 53.53 |
e-value: 3.9e-06 |
Identity: 31.11% |
Span: 267bp (37.4%) |
Frame: -1 |
gi|32403860|ref|XP_322543.1| hypothetical protein [Neurospora crassa] gi|28917853|gb|EAA27540.1| hypothetical protein... |
Match: gi|45509494|ref|ZP_00161828.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 34.88% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|45509494|ref|ZP_00161828.1| COG0724: RNA-binding proteins (RRM domain) [Anabaena variabilis ATCC 29413] |
Match: gi|17229803|ref|NP_486351.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 34.88% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|17229803|ref|NP_486351.1| RNA-binding protein [Nostoc sp. PCC 7120] gi|25386580|pir||AH2094 RNA-binding protein [i... |
Match: gi|45513450|ref|ZP_00165016.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 33.33% |
Span: 264bp (37.0%) |
Frame: -1 |
gi|45513450|ref|ZP_00165016.1| COG0724: RNA-binding proteins (RRM domain) [Synechococcus elongatus PCC 7942] |
Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 37.5% |
Span: 234bp (32.8%) |
Frame: -1 |
gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 37.5% |
Span: 234bp (32.8%) |
Frame: -1 |
gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
Match: gi|24584762|ref|NP_609822.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 29.71% |
Span: 411bp (57.6%) |
Frame: -1 |
gi|24584762|ref|NP_609822.1| CG12288-PA [Drosophila melanogaster] gi|7298360|gb|AAF53587.1| CG12288-PA [Drosophila me... |
Match: gi|27882534|gb|AAH44487.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|27882534|gb|AAH44487.1| Similar to RNA-binding region (RNP1, RRM) containing 2 [Danio rerio] |
Match: gi|8918490|dbj|BAA97656.1| |
score: 53.14 |
e-value: 5.1e-06 |
Identity: 38.89% |
Span: 213bp (29.8%) |
Frame: -1 |
gi|8918490|dbj|BAA97656.1| RNA-binding protein [Candida boidinii] |
Match: gi|21361702|ref|NP_060577.2| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|21361702|ref|NP_060577.2| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] gi|12803481|gb|AAH02566.1| RN... |
Match: gi|10880789|gb|AAG24388.1| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|10880789|gb|AAG24388.1| PP239 protein [Homo sapiens] |
Match: gi|541310|pir||S41505 |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 32.29% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|541310|pir||S41505 12RNP2 protein - Synechococcus sp. (PCC 6301) gi|961511|dbj|BAA09863.1| 12kDa RNA-binding, 12RN... |
Match: gi|29841408|gb|AAP06440.1| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 26.06% |
Span: 393bp (55.0%) |
Frame: -1 |
gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7 [Schistosoma japonicum] |
Match: gi|5911800|emb|CAB56042.1| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.33% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis] |
Match: gi|18848317|gb|AAH24208.1| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|18848317|gb|AAH24208.1| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] |
Match: gi|7022544|dbj|BAA91638.1| |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens] |
Match: gi|34925229|sp|Q86U06|RNP4_HUMAN |
score: 52.76 |
e-value: 6.6e-06 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|34925229|sp|Q86U06|RNP4_HUMAN RNA-binding region containing protein 4 (Splicing factor SF2) (PP239) gi|28071058|em... |
Match: gi|15222009|ref|NP_175322.1| |
score: 52.37 |
e-value: 8.6e-06 |
Identity: 29.49% |
Span: 231bp (32.4%) |
Frame: -1 |
ATNUC-L1; nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi11094815|gb|AAG29744.1|AC084414_12 nuM1... |
Match: gi|31207921|ref|XP_312927.1| |
score: 52.37 |
e-value: 8.6e-06 |
Identity: 33.33% |
Span: 249bp (34.9%) |
Frame: -1 |
gi|31207921|ref|XP_312927.1| ENSANGP00000023964 [Anopheles gambiae] gi|30177222|gb|EAA44801.1| ENSANGP00000023964 [An... |
Match: gi|49071476|ref|XP_400027.1| |
score: 52.37 |
e-value: 8.6e-06 |
Identity: 33.33% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|49071476|ref|XP_400027.1| hypothetical protein UM02412.1 [Ustilago maydis 521] >gi|46098217|gb|EAK83450.1| hypothe... |
Match: gi|1351109|sp|Q08473|SQD_DROME |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|1351109|sp|Q08473|SQD_DROME RNA-binding protein squid (Heterogeneous nuclear ribonucleoprotein 40) (HNRNP 40) |
Match: gi|477707|pir||B47369 |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|477707|pir||B47369 RNA-binding protein (alternatively spliced) SqdB - fruit fly (Drosophila melanogaster) gi|38545... |
Match: gi|24646605|ref|NP_652209.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|24646605|ref|NP_652209.1| squid CG16901-PC [Drosophila melanogaster] gi|23171183|gb|AAN13570.1| CG16901-PC [Drosop... |
Match: gi|24646609|ref|NP_731826.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|24646609|ref|NP_731826.1| squid CG16901-PA [Drosophila melanogaster] gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila ... |
Match: gi|476947|pir||A47369 |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|476947|pir||A47369 RNA-binding protein (alternatively spliced) SqdA - fruit fly (Drosophila melanogaster) gi|38545... |
Match: gi|24412751|emb|CAD55310.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.87% |
Span: 264bp (37.0%) |
Frame: -1 |
gi|24412751|emb|CAD55310.1| eukaryotic translation initiation factor 4H [Chironomus tentans] |
Match: gi|283666|pir||B41732 |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|283666|pir||B41732 heterogeneous nuclear RNP protein clone pHRP40.2 - fruit fly (Drosophila melanogaster) gi|11040... |
Match: gi|4850347|dbj|BAA77714.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 36.05% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|4850347|dbj|BAA77714.1| RNA-binding protein [Anabaena variabilis] |
Match: gi|47575772|ref|NP_001001230.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 33.8% |
Span: 210bp (29.4%) |
Frame: -1 |
gi|47575772|ref|NP_001001230.1| hypothetical protein MGC69525 [Xenopus tropicalis] >gi|45708904|gb|AAH67958.1| Hypoth... |
Match: gi|17229579|ref|NP_486127.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 36.05% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|17229579|ref|NP_486127.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120] gi|25386582|pir||AI2066 RNA-binding prot... |
Match: gi|1075643|pir||S44024 |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 36.05% |
Span: 252bp (35.3%) |
Frame: -1 |
gi|1075643|pir||S44024 RNA-binding protein - Anabaena sp gi|304055|gb|AAA17426.1| RNA-binding protein |
Match: gi|24646607|ref|NP_731825.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 31.82% |
Span: 261bp (36.6%) |
Frame: -1 |
gi|24646607|ref|NP_731825.1| squid CG16901-PB [Drosophila melanogaster] gi|23171184|gb|AAF54963.2| CG16901-PB [Drosop... |
Match: gi|48146631|emb|CAG33538.1| |
score: 51.99 |
e-value: 1.1e-05 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|48146631|emb|CAG33538.1| RNPC4 [Homo sapiens] |
Match: gi|17432522|gb|AAL39067.1| |
score: 51.6 |
e-value: 1.5e-05 |
Identity: 36.25% |
Span: 234bp (32.8%) |
Frame: -1 |
gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
Match: gi|46139099|ref|XP_391240.1| |
score: 51.6 |
e-value: 1.5e-05 |
Identity: 31.82% |
Span: 258bp (36.1%) |
Frame: -1 |
gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1] >gi|42552044|gb|EAA74887.1| hypoth... |
Match: gi|27924235|gb|AAH45063.1| |
score: 51.6 |
e-value: 1.5e-05 |
Identity: 33.8% |
Span: 210bp (29.4%) |
Frame: -1 |
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis] |
Match: gi|19112520|ref|NP_595728.1| |
score: 51.6 |
e-value: 1.5e-05 |
Identity: 34.12% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|19112520|ref|NP_595728.1| putative rna-binding protein. [Schizosaccharomyces pombe] gi|12230560|sp|O14369|SCE3_SCH... |
Match: gi|47213059|emb|CAF93812.1| |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 32.39% |
Span: 210bp (29.4%) |
Frame: -1 |
gi|47213059|emb|CAF93812.1| unnamed protein product [Tetraodon nigroviridis] |
Match: gi|38641399|gb|AAR26263.1| |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 36.62% |
Span: 210bp (29.4%) |
Frame: -1 |
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis] |
Match: gi|42794007|ref|NP_766350.2| |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 35.11% |
Span: 279bp (39.1%) |
Frame: -1 |
gi|42794007|ref|NP_766350.2| DNA segment, Chr 8, ERATO Doi 233, expressed [Mus musculus] |
Match: gi|862465|dbj|BAA04177.1| |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 32.29% |
Span: 276bp (38.7%) |
Frame: -1 |
gi|862465|dbj|BAA04177.1| ss-DNA binding protein 12RNP2 precursor [Synechococcus sp. PCC 6301] |
Match: gi|7439995|pir||T15047 |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 33.33% |
Span: 255bp (35.7%) |
Frame: -1 |
gi|7439995|pir||T15047 RNA binding protein 3 - wood tobacco gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana... |
Match: gi|1076251|pir||S50765 |
score: 51.22 |
e-value: 1.9e-05 |
Identity: 39.47% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|1076251|pir||S50765 RNA-binding protein - common ice plant gi|388621|gb|AAA33039.1| RNA-binding protein |
Match: gi|17553656|ref|NP_499734.1| |
score: 50.83 |
e-value: 2.5e-05 |
Identity: 28.57% |
Span: 288bp (40.3%) |
Frame: -1 |
gi|17553656|ref|NP_499734.1| cleavage and Polyadenylation Factor (cpf-2) [Caenorhabditis elegans] gi|7504374|pir||T22... |
Match: gi|18026763|gb|AAL55607.1| |
score: 50.06 |
e-value: 4.3e-05 |
Identity: 36.49% |
Span: 222bp (31.1%) |
Frame: -1 |
gi|18026763|gb|AAL55607.1| phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana] |
Match: gi|15233246|ref|NP_191094.1| |
score: 50.06 |
e-value: 4.3e-05 |
Identity: 36.49% |
Span: 222bp (31.1%) |
Frame: -1 |
PHIP1 (PHRAGMOPLASTIN INTERACTING PROTEIN 1); RNA binding / mRNA binding [Arabidopsis thaliana] >gi7019667|emb|CAB757... |
Match: gi|15233246|ref|NP_191094.1| |
score: 50.06 |
e-value: 4.3e-05 |
Identity: 64.71% |
Span: 99bp (13.9%) |
Frame: -1 |
PHIP1 (PHRAGMOPLASTIN INTERACTING PROTEIN 1); RNA binding / mRNA binding [Arabidopsis thaliana] >gi7019667|emb|CAB757... |
Match: gi|18026763|gb|AAL55607.1| |
score: 50.06 |
e-value: 4.3e-05 |
Identity: 64.71% |
Span: 99bp (13.9%) |
Frame: -1 |
gi|18026763|gb|AAL55607.1| phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana] |
Match: gi|45680441|gb|AAS75242.1| |
score: 47.37 |
e-value: 0.00028 |
Identity: 40% |
Span: 201bp (28.2%) |
Frame: -1 |
gi|45680441|gb|AAS75242.1| 'contains similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00076' [Or... |
Match: gi|45680441|gb|AAS75242.1| |
score: 43.13 |
e-value: 0.005 |
Identity: 37.7% |
Span: 180bp (25.2%) |
Frame: -1 |
gi|45680441|gb|AAS75242.1| 'contains similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00076' [Or... |
Match: gi|45680441|gb|AAS75242.1| |
score: 42.36 |
e-value: 0.009 |
Identity: 39.47% |
Span: 201bp (28.2%) |
Frame: -1 |
gi|45680441|gb|AAS75242.1| 'contains similar to RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), PF00076' [Or... |
|
165 lower scoring hits censored -- only 100 best hits are stored. |