| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|9758966|dbj|BAB09409.1| |
score: 256.9 |
e-value: 1.9e-67 |
Identity: 83.97% |
Span: 468bp (65.5%) |
Frame: 2 |
| splicing factor-like protein [Arabidopsis thaliana] |
| Match: gi|10334491|emb|CAC10207.1| |
score: 256.9 |
e-value: 1.9e-67 |
Identity: 85.99% |
Span: 471bp (66.0%) |
Frame: 2 |
| putative splicing factor [Cicer arietinum] |
| Match: gi|28059803|gb|AAO30095.1| |
score: 256.9 |
e-value: 1.9e-67 |
Identity: 83.97% |
Span: 468bp (65.5%) |
Frame: 2 |
| splicing factor-like protein [Arabidopsis thaliana] |
| Match: gi|18416114|ref|NP_568220.1| |
score: 256.9 |
e-value: 1.9e-67 |
Identity: 83.97% |
Span: 468bp (65.5%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi15451046|gb|AAK96794.1| splicing factor-like... |
| Match: gi|21553746|gb|AAM62839.1| |
score: 223.8 |
e-value: 1.8e-57 |
Identity: 74.68% |
Span: 471bp (66.0%) |
Frame: 2 |
| putative splicing factor [Arabidopsis thaliana] |
| Match: gi|18398260|ref|NP_565399.1| |
score: 223.8 |
e-value: 1.8e-57 |
Identity: 74.68% |
Span: 471bp (66.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20197280|gb|AAC64224.2| putative splicing fa... |
| Match: gi|25411757|pir||B84546 |
score: 223.8 |
e-value: 1.8e-57 |
Identity: 74.68% |
Span: 471bp (66.0%) |
Frame: 2 |
| gi|25411757|pir||B84546 probable splicing factor [imported] - Arabidopsis thaliana |
| Match: gi|20466772|gb|AAM20703.1| |
score: 223.8 |
e-value: 1.8e-57 |
Identity: 74.68% |
Span: 471bp (66.0%) |
Frame: 2 |
| putative splicing factor [Arabidopsis thaliana] |
| Match: gi|37534740|ref|NP_921672.1| |
score: 214.5 |
e-value: 1.1e-54 |
Identity: 77.93% |
Span: 435bp (60.9%) |
Frame: 2 |
| gi|37534740|ref|NP_921672.1| putative splicing factor-like protein [Oryza sativa (japonica cultivar-group)] gi|314323... |
| Match: gi|27882534|gb|AAH44487.1| |
score: 149.8 |
e-value: 3.2e-35 |
Identity: 53.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|27882534|gb|AAH44487.1| Similar to RNA-binding region (RNP1, RRM) containing 2 [Danio rerio] |
| Match: gi|35493811|ref|NP_909122.1| |
score: 147.9 |
e-value: 1.2e-34 |
Identity: 52% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
| Match: gi|13278367|gb|AAH04000.1| |
score: 147.9 |
e-value: 1.2e-34 |
Identity: 52% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus] |
| Match: gi|34860256|ref|XP_342558.1| |
score: 147.9 |
e-value: 1.2e-34 |
Identity: 52% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
| Match: gi|4757926|ref|NP_004893.1| |
score: 147.9 |
e-value: 1.2e-34 |
Identity: 52% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|4757926|ref|NP_004893.1| RNA-binding region containing protein 2 isoform b; splicing factor CC1.3; coactivator of ... |
| Match: gi|18875412|ref|NP_573505.1| |
score: 143.3 |
e-value: 3e-33 |
Identity: 50.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
| Match: gi|33150650|gb|AAP97203.1| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|33150650|gb|AAP97203.1| splicing factor SF2 [Homo sapiens] |
| Match: gi|7022544|dbj|BAA91638.1| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens] |
| Match: gi|21361702|ref|NP_060577.2| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|21361702|ref|NP_060577.2| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] gi|12803481|gb|AAH02566.1| RN... |
| Match: gi|18848317|gb|AAH24208.1| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|18848317|gb|AAH24208.1| RNA-binding region (RNP1, RRM) containing 4 [Homo sapiens] |
| Match: gi|10880789|gb|AAG24388.1| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|10880789|gb|AAG24388.1| PP239 protein [Homo sapiens] |
| Match: gi|21739702|emb|CAD38887.1| |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens] |
| Match: gi|34925229|sp|Q86U06|RNP4_HUMAN |
score: 140.2 |
e-value: 2.6e-32 |
Identity: 48.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|34925229|sp|Q86U06|RNP4_HUMAN RNA-binding region containing protein 4 (Splicing factor SF2) (PP239) gi|28071058|em... |
| Match: gi|19920866|ref|NP_609095.1| |
score: 135.6 |
e-value: 6.3e-31 |
Identity: 48% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|19920866|ref|NP_609095.1| CG11266-PB [Drosophila melanogaster] gi|24582412|ref|NP_723243.1| CG11266-PA [Drosophila... |
| Match: gi|34365067|emb|CAE45890.1| |
score: 134.8 |
e-value: 1.1e-30 |
Identity: 50.71% |
Span: 420bp (58.8%) |
Frame: 2 |
| gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
| Match: gi|31873732|emb|CAD97833.1| |
score: 134.8 |
e-value: 1.1e-30 |
Identity: 50.71% |
Span: 420bp (58.8%) |
Frame: 2 |
| gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
| Match: gi|35493822|ref|NP_909129.1| |
score: 134.8 |
e-value: 1.1e-30 |
Identity: 50.71% |
Span: 420bp (58.8%) |
Frame: 2 |
| gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
| Match: gi|35493817|ref|NP_909125.1| |
score: 134.8 |
e-value: 1.1e-30 |
Identity: 50.71% |
Span: 420bp (58.8%) |
Frame: 2 |
| gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
| Match: gi|37546141|ref|XP_210037.2| |
score: 128.6 |
e-value: 7.7e-29 |
Identity: 46% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|37546141|ref|XP_210037.2| similar to RNA-binding region containing protein 2 (Hepatocellular carcinoma protein 1) ... |
| Match: gi|31221129|ref|XP_317010.1| |
score: 125.2 |
e-value: 8.5e-28 |
Identity: 44.59% |
Span: 471bp (66.0%) |
Frame: 2 |
| gi|31221129|ref|XP_317010.1| ENSANGP00000019306 [Anopheles gambiae] gi|30175266|gb|EAA12873.2| ENSANGP00000019306 [An... |
| Match: gi|19115334|ref|NP_594422.1| |
score: 122.1 |
e-value: 7.2e-27 |
Identity: 43.79% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|19115334|ref|NP_594422.1| putative splicing factor [Schizosaccharomyces pombe] gi|7492998|pir||T37994 probable spl... |
| Match: gi|18376336|emb|CAD21082.1| |
score: 119.4 |
e-value: 4.7e-26 |
Identity: 41.67% |
Span: 468bp (65.5%) |
Frame: 2 |
| gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa] |
| Match: gi|4530579|gb|AAD22102.1| |
score: 119.4 |
e-value: 4.7e-26 |
Identity: 41.67% |
Span: 468bp (65.5%) |
Frame: 2 |
| gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa] |
| Match: gi|32404272|ref|XP_322749.1| |
score: 119.4 |
e-value: 4.7e-26 |
Identity: 41.67% |
Span: 468bp (65.5%) |
Frame: 2 |
| gi|32404272|ref|XP_322749.1| hypothetical protein ( (AF130355) Pad-1 [Neurospora crassa] ) gi|28916904|gb|EAA26642.1|... |
| Match: gi|23619166|ref|NP_705128.1| |
score: 112.1 |
e-value: 7.5e-24 |
Identity: 41.25% |
Span: 468bp (65.5%) |
Frame: 2 |
| gi|23619166|ref|NP_705128.1| splicing factor, putative [Plasmodium falciparum 3D7] gi|23615373|emb|CAD52364.1| splici... |
| Match: gi|23481068|gb|EAA17458.1| |
score: 112.1 |
e-value: 7.5e-24 |
Identity: 42.31% |
Span: 456bp (63.9%) |
Frame: 2 |
| gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii] |
| Match: gi|25148310|ref|NP_741301.1| |
score: 107.1 |
e-value: 2.4e-22 |
Identity: 40.43% |
Span: 423bp (59.2%) |
Frame: 2 |
| gi|25148310|ref|NP_741301.1| RNA-binding region containing 2 like (47.5 kD) (4B771) [Caenorhabditis elegans] gi|22532... |
| Match: gi|17543644|ref|NP_500025.1| |
score: 107.1 |
e-value: 2.4e-22 |
Identity: 40.43% |
Span: 423bp (59.2%) |
Frame: 2 |
| gi|17543644|ref|NP_500025.1| RNA-binding region containing 2 like (64.9 kD) (4B771) [Caenorhabditis elegans] gi|15487... |
| Match: gi|19114443|ref|NP_593531.1| |
score: 70.86 |
e-value: 1.9e-11 |
Identity: 30.82% |
Span: 435bp (60.9%) |
Frame: 2 |
| gi|19114443|ref|NP_593531.1| gar2 protein [Schizosaccharomyces pombe] gi|6226864|sp|P41891|GAR2_SCHPO Protein gar2 gi... |
| Match: gi|27694771|gb|AAH43814.1| |
score: 70.48 |
e-value: 2.5e-11 |
Identity: 31.34% |
Span: 402bp (56.3%) |
Frame: 2 |
| gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis] |
| Match: gi|29124621|gb|AAH48898.1| |
score: 70.09 |
e-value: 3.3e-11 |
Identity: 28.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|29124621|gb|AAH48898.1| Similar to heterogeneous nuclear ribonucleoprotein A/B [Danio rerio] |
| Match: gi|5052976|gb|AAD38787.1| |
score: 69.71 |
e-value: 4.3e-11 |
Identity: 29.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|5052976|gb|AAD38787.1| hnRNP A/B related protein [Felis catus] |
| Match: gi|12803583|gb|AAH02625.1| |
score: 69.71 |
e-value: 4.3e-11 |
Identity: 28.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|12803583|gb|AAH02625.1| HNRPAB protein [Homo sapiens] gi|13528732|gb|AAH04561.1| HNRPAB protein [Homo sapiens] gi|... |
| Match: gi|21757498|dbj|BAC05134.1| |
score: 69.71 |
e-value: 4.3e-11 |
Identity: 28.67% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|21757498|dbj|BAC05134.1| unnamed protein product [Homo sapiens] gi|33874222|gb|AAH36708.1| HNRPAB protein [Homo sa... |
| Match: gi|2130461|pir||S55785 |
score: 68.94 |
e-value: 7.3e-11 |
Identity: 30.14% |
Span: 435bp (60.9%) |
Frame: 2 |
| gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast (Schizosaccharomyces pombe) gi|663262|emb|CAA88179.1| g... |
| Match: gi|1362731|pir||S56751 |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|1362731|pir||S56751 single stranded D box binding factor 1 - chicken gi|515838|emb|CAA56586.1| single stranded D b... |
| Match: gi|6754222|ref|NP_034578.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|6754222|ref|NP_034578.1| heterogeneous nuclear ribonucleoprotein A/B [Mus musculus] gi|729000|sp|Q99020|ROAA_MOUSE... |
| Match: gi|13786156|ref|NP_112620.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|13786156|ref|NP_112620.1| heterogeneous nuclear ribonucleoprotein A/B [Rattus norvegicus] gi|3377279|dbj|BAA32032.... |
| Match: gi|27695334|gb|AAH43069.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|27695334|gb|AAH43069.1| Hnrpab protein [Mus musculus] |
| Match: gi|1362732|pir||S56750 |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|1362732|pir||S56750 single stranded D box binding factor 2 - chicken |
| Match: gi|12851175|dbj|BAB28963.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|12851175|dbj|BAB28963.1| unnamed protein product [Mus musculus] |
| Match: gi|26345118|dbj|BAC36208.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|26345118|dbj|BAC36208.1| unnamed protein product [Mus musculus] |
| Match: gi|6562847|emb|CAB62554.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|6562847|emb|CAB62554.1| heterogeneous nuclear ribonucleoprotein; type A/B hnRNP p38 [Rattus norvegicus] gi|6911221... |
| Match: gi|4378711|gb|AAD19638.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|4378711|gb|AAD19638.1| nucleic acid binding factor pRM10 [Rattus norvegicus] |
| Match: gi|6562845|emb|CAB62553.1| |
score: 68.55 |
e-value: 9.5e-11 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|6562845|emb|CAB62553.1| heterogeneous nuclear ribonucleoprotein; type A/B hnRNP p40 [Rattus norvegicus] |
| Match: gi|33416353|gb|AAH55525.1| |
score: 67.78 |
e-value: 1.6e-10 |
Identity: 28% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|33416353|gb|AAH55525.1| Unknown (protein for MGC:66169) [Danio rerio] |
| Match: gi|28175291|gb|AAH45124.1| |
score: 65.85 |
e-value: 6.1e-10 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|28175291|gb|AAH45124.1| MGC53310 protein [Xenopus laevis] |
| Match: gi|4758542|ref|NP_004490.1| |
score: 65.47 |
e-value: 8e-10 |
Identity: 28.48% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|4758542|ref|NP_004490.1| heterogeneous nuclear ribonucleoprotein AB isoform b; hnRNP type A/B protein; apolipoprot... |
| Match: gi|14110404|ref|NP_112556.1| |
score: 65.47 |
e-value: 8e-10 |
Identity: 28.48% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|14110404|ref|NP_112556.1| heterogeneous nuclear ribonucleoprotein AB isoform a; hnRNP type A/B protein; apolipopro... |
| Match: gi|21741248|emb|CAD41732.1| |
score: 65.08 |
e-value: 1e-09 |
Identity: 31.55% |
Span: 462bp (64.7%) |
Frame: 2 |
| gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|4885423|ref|NP_005454.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|4885423|ref|NP_005454.1| heterogeneous nuclear ribonucleoprotein D-like; A+U-rich element RNA binding factor [Homo... |
| Match: gi|38327502|gb|AAR17782.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|38327502|gb|AAR17782.1| CArG binding factor [Homo sapiens] |
| Match: gi|15010818|dbj|BAB62188.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|15010818|dbj|BAB62188.1| JKTBP1delta6 [Homo sapiens] |
| Match: gi|34876235|ref|XP_223190.2| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|34876235|ref|XP_223190.2| similar to heterogeneous nuclear ribonucleoprotein D-like; A+U-rich element RNA binding ... |
| Match: gi|7710036|ref|NP_057899.1| |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|7710036|ref|NP_057899.1| heterogeneous nuclear ribonucleoprotein D-like [Mus musculus] gi|4514631|dbj|BAA75479.1| ... |
| Match: gi|7446333|pir||JW0079 |
score: 64.7 |
e-value: 1.4e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|7446333|pir||JW0079 heterogeneous nuclear ribonucleoprotein homolog JKTBP [imported] - human gi|2780748|dbj|BAA243... |
| Match: gi|1079438|pir||S53710 |
score: 63.16 |
e-value: 4e-09 |
Identity: 28.36% |
Span: 402bp (56.3%) |
Frame: 2 |
| gi|1079438|pir||S53710 ribonucleoprotein - chicken gi|550458|gb|AAA68014.1| ribonucleoprotein gi|1095499|prf||2109229... |
| Match: gi|2137113|pir||I49069 |
score: 63.16 |
e-value: 4e-09 |
Identity: 26.97% |
Span: 456bp (63.9%) |
Frame: 2 |
| gi|2137113|pir||I49069 A+U-rich RNA-binding protein - mouse (fragment) gi|508268|gb|AAA64653.1| A+U-rich RNA-binding ... |
| Match: gi|19173032|ref|NP_597583.1| |
score: 63.16 |
e-value: 4e-09 |
Identity: 27.27% |
Span: 462bp (64.7%) |
Frame: 2 |
| gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi] gi|19168699|emb|CAD26218.... |
| Match: gi|433344|gb|AAC50056.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|433344|gb|AAC50056.1| p37 AUF1 |
| Match: gi|2547076|dbj|BAA22860.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 29.1% |
Span: 402bp (56.3%) |
Frame: 2 |
| gi|2547076|dbj|BAA22860.1| A+U-rich element RNA binding factor [Homo sapiens] |
| Match: gi|31242307|ref|XP_321584.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 28.76% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|31242307|ref|XP_321584.1| ENSANGP00000011587 [Anopheles gambiae] gi|21288546|gb|EAA00839.1| ENSANGP00000011587 [An... |
| Match: gi|38175737|dbj|BAC55617.2| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 30.46% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|1082775|pir||A54601 |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|1082775|pir||A54601 RNA-binding protein AUF1 - human |
| Match: gi|14110417|ref|NP_112737.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D isoform b; AU-rich element RNA-binding protein... |
| Match: gi|870743|dbj|BAA09522.1| |
score: 62.77 |
e-value: 5.2e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens] |
| Match: gi|6671602|ref|NP_031542.1| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|6671602|ref|NP_031542.1| heterogeneous nuclear ribonucleoprotein D; AU-rich element RNA-binding protein 1 [Mus mus... |
| Match: gi|15222009|ref|NP_175322.1| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.25% |
Span: 462bp (64.7%) |
Frame: 2 |
| ATNUC-L1; nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi11094815|gb|AAG29744.1|AC084414_12 nuM1... |
| Match: gi|3747052|gb|AAC77437.1| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus] |
| Match: gi|14110420|ref|NP_112738.1| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D isoform a; AU-rich element RNA-binding protein... |
| Match: gi|14110414|ref|NP_002129.2| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D isoform c; AU-rich element RNA-binding protein... |
| Match: gi|2773158|gb|AAB96683.1| |
score: 62.39 |
e-value: 6.8e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens] |
| Match: gi|9588102|dbj|BAB03468.1| |
score: 62 |
e-value: 8.9e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus] |
| Match: gi|33516945|sp|Q60668|ROD_MOUSE |
score: 62 |
e-value: 8.9e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|33516945|sp|Q60668|ROD_MOUSE Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding pr... |
| Match: gi|29145079|gb|AAH49098.1| |
score: 62 |
e-value: 8.9e-09 |
Identity: 26.8% |
Span: 459bp (64.3%) |
Frame: 2 |
| gi|29145079|gb|AAH49098.1| Hnrpd protein [Mus musculus] |
| Match: gi|9588098|dbj|BAB03466.1| |
score: 62 |
e-value: 8.9e-09 |
Identity: 27.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus] |
| Match: gi|19114443|ref|NP_593531.1| |
score: 48.91 |
e-value: 7.8e-05 |
Identity: 34.78% |
Span: 207bp (29.0%) |
Frame: 2 |
| gi|19114443|ref|NP_593531.1| gar2 protein [Schizosaccharomyces pombe] gi|6226864|sp|P41891|GAR2_SCHPO Protein gar2 gi... |
| Match: gi|2130461|pir||S55785 |
score: 48.91 |
e-value: 7.8e-05 |
Identity: 34.78% |
Span: 207bp (29.0%) |
Frame: 2 |
| gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast (Schizosaccharomyces pombe) gi|663262|emb|CAA88179.1| g... |
| Match: gi|31221129|ref|XP_317010.1| |
score: 44.28 |
e-value: 0.002 |
Identity: 32.94% |
Span: 252bp (35.3%) |
Frame: 2 |
| gi|31221129|ref|XP_317010.1| ENSANGP00000019306 [Anopheles gambiae] gi|30175266|gb|EAA12873.2| ENSANGP00000019306 [An... |
| Match: gi|19173032|ref|NP_597583.1| |
score: 41.2 |
e-value: 0.016 |
Identity: 32.76% |
Span: 174bp (24.4%) |
Frame: 2 |
| gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi] gi|19168699|emb|CAD26218.... |
| Match: gi|27882534|gb|AAH44487.1| |
score: 39.28 |
e-value: 0.062 |
Identity: 37.1% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|27882534|gb|AAH44487.1| Similar to RNA-binding region (RNP1, RRM) containing 2 [Danio rerio] |
| Match: gi|18875412|ref|NP_573505.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
| Match: gi|38175737|dbj|BAC55617.2| |
score: 38.89 |
e-value: 0.08 |
Identity: 29.73% |
Span: 222bp (31.1%) |
Frame: 2 |
| gi|38175737|dbj|BAC55617.2| putative heterogeneous nuclear ribonucleoprotein A1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34365067|emb|CAE45890.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
| Match: gi|31873732|emb|CAD97833.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
| Match: gi|35493817|ref|NP_909125.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
| Match: gi|35493822|ref|NP_909129.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
| Match: gi|13278367|gb|AAH04000.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|13278367|gb|AAH04000.1| Rnpc2 protein [Mus musculus] |
| Match: gi|4757926|ref|NP_004893.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|4757926|ref|NP_004893.1| RNA-binding region containing protein 2 isoform b; splicing factor CC1.3; coactivator of ... |
| Match: gi|34860256|ref|XP_342558.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
| Match: gi|35493811|ref|NP_909122.1| |
score: 38.89 |
e-value: 0.08 |
Identity: 35.48% |
Span: 183bp (25.6%) |
Frame: 2 |
| gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
|
| 217 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At5g09880.1 |
score: 256.9 |
e-value: 6.7e-69 |
Identity: 83.97% |
Span: 468bp (65.5%) |
Frame: 2 |
| At5g09880.1 68412.m01056 RRM-containing protein |
| Match: At2g16940.1 |
score: 223.8 |
e-value: 6.3e-59 |
Identity: 74.68% |
Span: 471bp (66.0%) |
Frame: 2 |
| At2g16940.1 68409.m01758 RRM-containing protein |
| Match: At1g48920.1 |
score: 62.39 |
e-value: 2.4e-10 |
Identity: 26.25% |
Span: 462bp (64.7%) |
Frame: 2 |
| At1g48920.1 68408.m05015 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] |
| Match: At1g60900.1 |
score: 58.92 |
e-value: 2.7e-09 |
Identity: 26.74% |
Span: 456bp (63.9%) |
Frame: 2 |
| At1g60900.1 68408.m06287 splicing factor U2AF 65 kDa subunit, putative similar to U2 snRNP auxiliary factor, large su... |
| Match: At3g18610.1 |
score: 58.92 |
e-value: 2.7e-09 |
Identity: 28.3% |
Span: 465bp (65.1%) |
Frame: 2 |
| At3g18610.1 68410.m02135 nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif |
| Match: At3g15010.1 |
score: 54.68 |
e-value: 5e-08 |
Identity: 27.45% |
Span: 459bp (64.3%) |
Frame: 2 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At4g24270.2 |
score: 53.91 |
e-value: 8.6e-08 |
Identity: 28.09% |
Span: 267bp (37.4%) |
Frame: 2 |
| At4g24270.2 68411.m05306 RNA recognition motif (RRM) - containing protein low similarity to tumor-rejection antigen S... |
| Match: At4g24270.1 |
score: 53.91 |
e-value: 8.6e-08 |
Identity: 28.09% |
Span: 267bp (37.4%) |
Frame: 2 |
| At4g24270.1 68411.m05305 RNA recognition motif (RRM) - containing protein low similarity to tumor-rejection antigen S... |
| Match: At4g16280.3 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 28.06% |
Span: 405bp (56.7%) |
Frame: 2 |
| At4g16280.3 68411.m02248 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At3g14100.1 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 27.21% |
Span: 438bp (61.3%) |
Frame: 2 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At4g16280.2 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 28.06% |
Span: 405bp (56.7%) |
Frame: 2 |
| At4g16280.2 68411.m02247 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At1g49760.1 |
score: 53.53 |
e-value: 1.1e-07 |
Identity: 28.67% |
Span: 441bp (61.8%) |
Frame: 2 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At5g54900.1 |
score: 51.99 |
e-value: 3.3e-07 |
Identity: 23.72% |
Span: 453bp (63.4%) |
Frame: 2 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At1g54080.1 |
score: 51.22 |
e-value: 5.6e-07 |
Identity: 26.53% |
Span: 438bp (61.3%) |
Frame: 2 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At2g18510.1 |
score: 51.22 |
e-value: 5.6e-07 |
Identity: 28.57% |
Span: 450bp (63.0%) |
Frame: 2 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At1g17370.1 |
score: 50.83 |
e-value: 7.3e-07 |
Identity: 25.85% |
Span: 438bp (61.3%) |
Frame: 2 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At2g37220.1 |
score: 50.83 |
e-value: 7.3e-07 |
Identity: 26.45% |
Span: 432bp (60.5%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g07810.1 |
score: 50.45 |
e-value: 9.5e-07 |
Identity: 25.97% |
Span: 450bp (63.0%) |
Frame: 2 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.2 |
score: 50.45 |
e-value: 9.5e-07 |
Identity: 25.97% |
Span: 450bp (63.0%) |
Frame: 2 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At2g41060.1 |
score: 50.06 |
e-value: 1.2e-06 |
Identity: 23.42% |
Span: 459bp (64.3%) |
Frame: 2 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At4g27000.1 |
score: 49.68 |
e-value: 1.6e-06 |
Identity: 25% |
Span: 435bp (60.9%) |
Frame: 2 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At3g52380.1 |
score: 48.91 |
e-value: 2.8e-06 |
Identity: 22.15% |
Span: 444bp (62.2%) |
Frame: 2 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At3g56860.3 |
score: 48.91 |
e-value: 2.8e-06 |
Identity: 23.67% |
Span: 459bp (64.3%) |
Frame: 2 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 48.91 |
e-value: 2.8e-06 |
Identity: 23.67% |
Span: 459bp (64.3%) |
Frame: 2 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 48.91 |
e-value: 2.8e-06 |
Identity: 23.67% |
Span: 459bp (64.3%) |
Frame: 2 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At4g00830.1 |
score: 48.52 |
e-value: 3.6e-06 |
Identity: 27.21% |
Span: 432bp (60.5%) |
Frame: 2 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At4g19610.1 |
score: 48.14 |
e-value: 4.7e-06 |
Identity: 37.04% |
Span: 162bp (22.7%) |
Frame: 2 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g47120.1 |
score: 48.14 |
e-value: 4.7e-06 |
Identity: 34.18% |
Span: 234bp (32.8%) |
Frame: 2 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g55550.2 |
score: 48.14 |
e-value: 4.7e-06 |
Identity: 23.53% |
Span: 450bp (63.0%) |
Frame: 2 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.1 |
score: 48.14 |
e-value: 4.7e-06 |
Identity: 23.53% |
Span: 450bp (63.0%) |
Frame: 2 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At4g14300.1 |
score: 47.75 |
e-value: 6.2e-06 |
Identity: 26.8% |
Span: 450bp (63.0%) |
Frame: 2 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g53650.1 |
score: 47.75 |
e-value: 6.2e-06 |
Identity: 35.96% |
Span: 258bp (36.1%) |
Frame: 2 |
| At1g53650.1 68408.m05600 RNA-binding protein, putative similar to RNA-binding protein GB:AAA86641 GI:1174153 from [Ar... |
| Match: At3g53460.2 |
score: 47.37 |
e-value: 8e-06 |
Identity: 51.16% |
Span: 129bp (18.1%) |
Frame: 2 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 47.37 |
e-value: 8e-06 |
Identity: 51.16% |
Span: 129bp (18.1%) |
Frame: 2 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g36690.2 |
score: 47.37 |
e-value: 8e-06 |
Identity: 25.29% |
Span: 456bp (63.9%) |
Frame: 2 |
| At4g36690.2 68411.m04734 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At4g36690.1 |
score: 47.37 |
e-value: 8e-06 |
Identity: 25.29% |
Span: 456bp (63.9%) |
Frame: 2 |
| At4g36690.1 68411.m04733 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At2g37220.1 |
score: 46.98 |
e-value: 1.1e-05 |
Identity: 47.83% |
Span: 138bp (19.3%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At5g06210.1 |
score: 46.59 |
e-value: 1.4e-05 |
Identity: 35.21% |
Span: 210bp (29.4%) |
Frame: 2 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At4g26650.1 |
score: 46.59 |
e-value: 1.4e-05 |
Identity: 22.22% |
Span: 468bp (65.5%) |
Frame: 2 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g54080.2 |
score: 46.21 |
e-value: 1.8e-05 |
Identity: 25.83% |
Span: 438bp (61.3%) |
Frame: 2 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g52150.1 |
score: 45.82 |
e-value: 2.3e-05 |
Identity: 24.03% |
Span: 456bp (63.9%) |
Frame: 2 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At5g50250.1 |
score: 45.82 |
e-value: 2.3e-05 |
Identity: 31.46% |
Span: 246bp (34.5%) |
Frame: 2 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At5g40490.1 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 18.75% |
Span: 432bp (60.5%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At5g47620.2 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 23.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g11650.1 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 22.22% |
Span: 420bp (58.8%) |
Frame: 2 |
| At1g11650.1 68408.m01204 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At5g47620.1 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 23.33% |
Span: 450bp (63.0%) |
Frame: 2 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g11650.2 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 22.22% |
Span: 420bp (58.8%) |
Frame: 2 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At2g33410.1 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 23.53% |
Span: 450bp (63.0%) |
Frame: 2 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g58470.1 |
score: 45.44 |
e-value: 3.1e-05 |
Identity: 22.36% |
Span: 444bp (62.2%) |
Frame: 2 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At1g32790.1 |
score: 45.05 |
e-value: 4e-05 |
Identity: 27.56% |
Span: 381bp (53.4%) |
Frame: 2 |
| At1g32790.1 68408.m03661 RNA-binding protein, putative similar to RNA-binding protein GB:CAB40027 GI:4539439 from [Ar... |
| Match: At4g26650.1 |
score: 45.05 |
e-value: 4e-05 |
Identity: 32.43% |
Span: 222bp (31.1%) |
Frame: 2 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At3g14450.1 |
score: 45.05 |
e-value: 4e-05 |
Identity: 32.58% |
Span: 258bp (36.1%) |
Frame: 2 |
| At3g14450.1 68410.m01641 RNA-binding protein, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. ... |
| Match: At2g37220.1 |
score: 44.67 |
e-value: 5.2e-05 |
Identity: 42.37% |
Span: 174bp (24.4%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At5g61030.1 |
score: 44.67 |
e-value: 5.2e-05 |
Identity: 37.5% |
Span: 213bp (29.8%) |
Frame: 2 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g10610.1 |
score: 43.9 |
e-value: 8.9e-05 |
Identity: 26.98% |
Span: 378bp (52.9%) |
Frame: 2 |
| At4g10610.1 68411.m01568 RNA-binding protein RBP37 |
| Match: At4g24770.1 |
score: 43.9 |
e-value: 8.9e-05 |
Identity: 23.38% |
Span: 444bp (62.2%) |
Frame: 2 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g71800.1 |
score: 43.9 |
e-value: 8.9e-05 |
Identity: 46.81% |
Span: 141bp (19.7%) |
Frame: 2 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At1g53650.1 |
score: 43.9 |
e-value: 8.9e-05 |
Identity: 27.34% |
Span: 414bp (58.0%) |
Frame: 2 |
| At1g53650.1 68408.m05600 RNA-binding protein, putative similar to RNA-binding protein GB:AAA86641 GI:1174153 from [Ar... |
| Match: At3g14100.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 24.38% |
Span: 417bp (58.4%) |
Frame: 2 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At4g19610.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 24.5% |
Span: 429bp (60.1%) |
Frame: 2 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g53460.2 |
score: 43.51 |
e-value: 0.00012 |
Identity: 40.68% |
Span: 174bp (24.4%) |
Frame: 2 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 40.68% |
Span: 174bp (24.4%) |
Frame: 2 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g10610.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 33.71% |
Span: 258bp (36.1%) |
Frame: 2 |
| At4g10610.1 68411.m01568 RNA-binding protein RBP37 |
| Match: At3g16380.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 25.32% |
Span: 456bp (63.9%) |
Frame: 2 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At1g07350.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 27.27% |
Span: 261bp (36.6%) |
Frame: 2 |
| At1g07350.1 68408.m00713 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At5g44200.1 |
score: 43.51 |
e-value: 0.00012 |
Identity: 28.57% |
Span: 228bp (31.9%) |
Frame: 2 |
| At5g44200.1 68412.m04876 nuclear cap binding protein, putative similar to SP|P52298 20 kDa nuclear cap binding protei... |
| Match: At1g07350.2 |
score: 43.13 |
e-value: 0.00015 |
Identity: 35.19% |
Span: 162bp (22.7%) |
Frame: 2 |
| At1g07350.2 68408.m00714 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At4g24770.1 |
score: 43.13 |
e-value: 0.00015 |
Identity: 31.46% |
Span: 246bp (34.5%) |
Frame: 2 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At5g50250.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 21.43% |
Span: 444bp (62.2%) |
Frame: 2 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g13224.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 25.71% |
Span: 408bp (57.1%) |
Frame: 2 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.2 |
score: 42.74 |
e-value: 0.0002 |
Identity: 25.71% |
Span: 408bp (57.1%) |
Frame: 2 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g12640.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 25.79% |
Span: 453bp (63.4%) |
Frame: 2 |
| At3g12640.1 68410.m01410 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g14450.1 |
score: 42.74 |
e-value: 0.0002 |
Identity: 26.62% |
Span: 414bp (58.0%) |
Frame: 2 |
| At3g14450.1 68410.m01641 RNA-binding protein, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. ... |
| Match: At4g39260.1 |
score: 42.36 |
e-value: 0.00026 |
Identity: 34.85% |
Span: 195bp (27.3%) |
Frame: 2 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.2 |
score: 42.36 |
e-value: 0.00026 |
Identity: 34.85% |
Span: 195bp (27.3%) |
Frame: 2 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.3 |
score: 42.36 |
e-value: 0.00026 |
Identity: 34.85% |
Span: 195bp (27.3%) |
Frame: 2 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g07810.2 |
score: 42.36 |
e-value: 0.00026 |
Identity: 31.08% |
Span: 222bp (31.1%) |
Frame: 2 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 42.36 |
e-value: 0.00026 |
Identity: 31.08% |
Span: 222bp (31.1%) |
Frame: 2 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At1g32790.1 |
score: 42.36 |
e-value: 0.00026 |
Identity: 33.71% |
Span: 258bp (36.1%) |
Frame: 2 |
| At1g32790.1 68408.m03661 RNA-binding protein, putative similar to RNA-binding protein GB:CAB40027 GI:4539439 from [Ar... |
| Match: At1g47500.1 |
score: 41.97 |
e-value: 0.00034 |
Identity: 23.81% |
Span: 420bp (58.8%) |
Frame: 2 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At3g55340.1 |
score: 41.97 |
e-value: 0.00034 |
Identity: 29.58% |
Span: 213bp (29.8%) |
Frame: 2 |
| At3g55340.1 68410.m05676 RNA recognition motif (RRM) - containing protein low similarity to nucleolar phosphoprotein ... |
| Match: At1g71800.1 |
score: 41.2 |
e-value: 0.00058 |
Identity: 34.48% |
Span: 174bp (24.4%) |
Frame: 2 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At5g55550.1 |
score: 40.82 |
e-value: 0.00075 |
Identity: 29.73% |
Span: 222bp (31.1%) |
Frame: 2 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g40490.1 |
score: 40.82 |
e-value: 0.00075 |
Identity: 25.93% |
Span: 240bp (33.6%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At5g55550.2 |
score: 40.82 |
e-value: 0.00075 |
Identity: 29.73% |
Span: 222bp (31.1%) |
Frame: 2 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At1g54080.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 22.5% |
Span: 417bp (58.4%) |
Frame: 2 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g13224.2 |
score: 39.66 |
e-value: 0.002 |
Identity: 26.44% |
Span: 255bp (35.7%) |
Frame: 2 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g53460.2 |
score: 38.12 |
e-value: 0.005 |
Identity: 22.4% |
Span: 432bp (60.5%) |
Frame: 2 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At1g49760.1 |
score: 38.12 |
e-value: 0.005 |
Identity: 24.82% |
Span: 408bp (57.1%) |
Frame: 2 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At1g48920.1 |
score: 37.74 |
e-value: 0.006 |
Identity: 28.99% |
Span: 195bp (27.3%) |
Frame: 2 |
| At1g48920.1 68408.m05015 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] |
| Match: At5g47620.2 |
score: 37.35 |
e-value: 0.008 |
Identity: 25% |
Span: 228bp (31.9%) |
Frame: 2 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.1 |
score: 37.35 |
e-value: 0.008 |
Identity: 25% |
Span: 228bp (31.9%) |
Frame: 2 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g61030.1 |
score: 36.96 |
e-value: 0.011 |
Identity: 36.96% |
Span: 138bp (19.3%) |
Frame: 2 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At1g54080.2 |
score: 36.96 |
e-value: 0.011 |
Identity: 22.56% |
Span: 417bp (58.4%) |
Frame: 2 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g13224.1 |
score: 36.19 |
e-value: 0.019 |
Identity: 30.61% |
Span: 147bp (20.6%) |
Frame: 2 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g54900.1 |
score: 35.81 |
e-value: 0.024 |
Identity: 23.13% |
Span: 399bp (55.9%) |
Frame: 2 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At1g17370.1 |
score: 35.42 |
e-value: 0.032 |
Identity: 21.88% |
Span: 417bp (58.4%) |
Frame: 2 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At3g47120.1 |
score: 35.42 |
e-value: 0.032 |
Identity: 40.48% |
Span: 126bp (17.6%) |
Frame: 2 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g52380.1 |
score: 35.04 |
e-value: 0.041 |
Identity: 30.12% |
Span: 243bp (34.0%) |
Frame: 2 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At3g53460.1 |
score: 33.88 |
e-value: 0.092 |
Identity: 34.78% |
Span: 138bp (19.3%) |
Frame: 2 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
|
| 84 lower scoring hits censored -- only 100 best hits are stored. |
