| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|217074386|gb|ACJ85553.1| |
score: 308 |
e-value: 3e-82 |
Identity: 80.3% |
Span: 609bp (86.6%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|224118264|ref|XP_002317774.1| |
score: 307 |
e-value: 6e-82 |
Identity: 80.3% |
Span: 609bp (86.6%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222858447|gb|EEE95994.1| predicted protein [Populus trichocarpa] |
| Match: gi|255544982|ref|XP_002513552.1| |
score: 303 |
e-value: 1e-80 |
Identity: 79.9% |
Span: 597bp (84.9%) |
Frame: 3 |
| splicing factor 3a, putative [Ricinus communis] >gi223547460|gb|EEF48955.1| splicing factor 3a, putative [Ricinus com... |
| Match: gi|270234539|emb|CBI23142.1| |
score: 302 |
e-value: 2e-80 |
Identity: 80.3% |
Span: 609bp (86.6%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|217074606|gb|ACJ85663.1| |
score: 302 |
e-value: 2e-80 |
Identity: 78.82% |
Span: 609bp (86.6%) |
Frame: 3 |
| unknown [Medicago truncatula] |
| Match: gi|225455096|ref|XP_002268036.1| |
score: 298 |
e-value: 3e-79 |
Identity: 79.31% |
Span: 609bp (86.6%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|227206408|dbj|BAH57259.1| |
score: 295 |
e-value: 3e-78 |
Identity: 76.38% |
Span: 597bp (84.9%) |
Frame: 3 |
| AT5G06160 [Arabidopsis thaliana] |
| Match: gi|42567684|ref|NP_196234.3| |
score: 295 |
e-value: 3e-78 |
Identity: 76.38% |
Span: 597bp (84.9%) |
Frame: 3 |
| ATO (ATROPOS); nucleic acid binding / zinc ion binding [Arabidopsis thaliana] >gi9759314|dbj|BAB09681.1| splicing fac... |
| Match: gi|108710767|gb|ABF98562.1| |
score: 291 |
e-value: 6e-77 |
Identity: 81.59% |
Span: 597bp (84.9%) |
Frame: 3 |
| Splicing factor 3A subunit 3, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|115454963|ref|NP_001051082.1| |
score: 291 |
e-value: 6e-77 |
Identity: 81.59% |
Span: 597bp (84.9%) |
Frame: 3 |
| Os03g0717600 [Oryza sativa (japonica cultivar-group)] >gi108710766|gb|ABF98561.1| Splicing factor 3A subunit 3, putat... |
| Match: gi|242054013|ref|XP_002456152.1| |
score: 285 |
e-value: 3e-75 |
Identity: 79.6% |
Span: 597bp (84.9%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g031320 [Sorghum bicolor] >gi241928127|gb|EES01272.1| hypothetical protein SORBIDRA... |
| Match: gi|224135217|ref|XP_002322012.1| |
score: 285 |
e-value: 4e-75 |
Identity: 79.38% |
Span: 582bp (82.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222869008|gb|EEF06139.1| predicted protein [Populus trichocarpa] |
| Match: gi|224034731|gb|ACN36441.1| |
score: 283 |
e-value: 9e-75 |
Identity: 78.11% |
Span: 597bp (84.9%) |
Frame: 3 |
| unknown [Zea mays] |
| Match: gi|219363349|ref|NP_001136895.1| |
score: 283 |
e-value: 9e-75 |
Identity: 78.11% |
Span: 597bp (84.9%) |
Frame: 3 |
| hypothetical protein LOC100217051 [Zea mays] >gi194697502|gb|ACF82835.1| unknown [Zea mays] |
| Match: gi|242073308|ref|XP_002446590.1| |
score: 283 |
e-value: 1e-74 |
Identity: 78.61% |
Span: 597bp (84.9%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_06g018560 [Sorghum bicolor] >gi241937773|gb|EES10918.1| hypothetical protein SORBIDRA... |
| Match: gi|294462630|gb|ADE76861.1| |
score: 275 |
e-value: 4e-72 |
Identity: 77.89% |
Span: 597bp (84.9%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|168049650|ref|XP_001777275.1| |
score: 260 |
e-value: 1e-67 |
Identity: 71.29% |
Span: 597bp (84.9%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162671377|gb|EDQ57930.1| predicted protein [Physcomitrella... |
| Match: gi|159466220|ref|XP_001691307.1| |
score: 199 |
e-value: 1e-54 |
Identity: 58.21% |
Span: 594bp (84.5%) |
Frame: 3 |
| SF3A3 splicing factor 3a, subunit 3 [Chlamydomonas reinhardtii] >gi158279279|gb|EDP05040.1| SF3A3 splicing factor 3a,... |
| Match: gi|255089116|ref|XP_002506480.1| |
score: 184 |
e-value: 2e-50 |
Identity: 53% |
Span: 594bp (84.5%) |
Frame: 3 |
| predicted protein [Micromonas sp. RCC299] >gi226521752|gb|ACO67738.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|145354772|ref|XP_001421650.1| |
score: 176 |
e-value: 8e-49 |
Identity: 51.27% |
Span: 555bp (78.9%) |
Frame: 3 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144581888|gb|ABO99943.1| predicted protein [Ostreococcus luci... |
| Match: gi|226455353|gb|EEH52657.1| |
score: 175 |
e-value: 3e-48 |
Identity: 50.51% |
Span: 594bp (84.5%) |
Frame: 3 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|145354772|ref|XP_001421650.1| |
score: 43.1 |
e-value: 8e-49 |
Identity: 81.82% |
Span: 66bp (9.4%) |
Frame: 2 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144581888|gb|ABO99943.1| predicted protein [Ostreococcus luci... |
| Match: gi|226455353|gb|EEH52657.1| |
score: 42.4 |
e-value: 3e-48 |
Identity: 69.57% |
Span: 69bp (9.8%) |
Frame: 2 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|255089116|ref|XP_002506480.1| |
score: 40.8 |
e-value: 2e-50 |
Identity: 72.73% |
Span: 66bp (9.4%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226521752|gb|ACO67738.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|159466220|ref|XP_001691307.1| |
score: 39.3 |
e-value: 1e-54 |
Identity: 65.22% |
Span: 69bp (9.8%) |
Frame: 2 |
| SF3A3 splicing factor 3a, subunit 3 [Chlamydomonas reinhardtii] >gi158279279|gb|EDP05040.1| SF3A3 splicing factor 3a,... |
|
| 278 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At5G06160.1 |
score: 295 |
e-value: 2e-80 |
Identity: 76.38% |
Span: 597bp (84.9%) |
Frame: 3 |
| splicing factor-related | chr5:1862624-1866299 REVERSE |
|
| swissprot [blastx] | Showing best 8 hits recorded |
| Match: Q12874 |
score: 177 |
e-value: 8e-44 |
Identity: 50% |
Span: 594bp (84.5%) |
Frame: 3 |
| Splicing factor 3A subunit 3 OS=Homo sapiens GN=SF3A3 PE=1 SV=1 |
| Match: Q9D554 |
score: 177 |
e-value: 6e-44 |
Identity: 50% |
Span: 594bp (84.5%) |
Frame: 3 |
| Splicing factor 3A subunit 3 OS=Mus musculus GN=Sf3a3 PE=2 SV=2 |
| Match: O46106 |
score: 173 |
e-value: 8e-47 |
Identity: 51.22% |
Span: 492bp (70.0%) |
Frame: 3 |
| Splicing factor 3A subunit 3 OS=Drosophila melanogaster GN=noi PE=1 SV=1 |
| Match: O59706 |
score: 153 |
e-value: 5e-40 |
Identity: 50.31% |
Span: 444bp (63.2%) |
Frame: 3 |
| CWF complex protein sap61 OS=Schizosaccharomyces pombe GN=sap61 PE=1 SV=1 |
| Match: P19736 |
score: 108 |
e-value: 1e-26 |
Identity: 54.65% |
Span: 258bp (36.7%) |
Frame: 3 |
| Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae GN=PRP9 PE=1 SV=1 |
| Match: O46106 |
score: 35.4 |
e-value: 8e-47 |
Identity: 60.87% |
Span: 69bp (9.8%) |
Frame: 2 |
| Splicing factor 3A subunit 3 OS=Drosophila melanogaster GN=noi PE=1 SV=1 |
| Match: P19736 |
score: 33.1 |
e-value: 1e-26 |
Identity: 54.55% |
Span: 66bp (9.4%) |
Frame: 2 |
| Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae GN=PRP9 PE=1 SV=1 |
| Match: O59706 |
score: 32.7 |
e-value: 5e-40 |
Identity: 59.09% |
Span: 66bp (9.4%) |
Frame: 2 |
| CWF complex protein sap61 OS=Schizosaccharomyces pombe GN=sap61 PE=1 SV=1 |
|
