| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|11134656|sp|Q42877|RPB2_SOLLC |
score: 297 |
e-value: 4e-79 |
Identity: 99.31% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|157344351|emb|CAO69734.1| |
score: 296 |
e-value: 9e-79 |
Identity: 98.61% |
Span: 432bp (61.6%) |
Frame: 3 |
| unnamed |
| Match: gi|147841183|emb|CAN72948.1| |
score: 296 |
e-value: 9e-79 |
Identity: 98.61% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|68300810|gb|AAY89346.1| |
score: 295 |
e-value: 2e-78 |
Identity: 98.61% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Nicotiana sylvestris] |
| Match: gi|68300812|gb|AAY89347.1| |
score: 295 |
e-value: 2e-78 |
Identity: 98.61% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Petunia x hybrida] |
| Match: gi|70794966|gb|AAZ08457.1| |
score: 293 |
e-value: 6e-78 |
Identity: 96.53% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Rhododendron macrophyllum] |
| Match: gi|68300814|gb|AAY89348.1| |
score: 293 |
e-value: 7e-78 |
Identity: 96.53% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Antirrhinum majus] |
| Match: gi|70794986|gb|AAZ08467.1| |
score: 291 |
e-value: 4e-77 |
Identity: 95.83% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Linanthus californicus] |
| Match: gi|115454339|ref|NP_001050770.1| |
score: 290 |
e-value: 5e-77 |
Identity: 96.53% |
Span: 432bp (61.6%) |
Frame: 3 |
| Os03g0646800 [Oryza sativa (japonica cultivar-group)] >gi113549241|dbj|BAF12684.1| Os03g0646800 [Oryza sativa Japonic... |
| Match: gi|108710089|gb|ABF97884.1| |
score: 290 |
e-value: 5e-77 |
Identity: 96.53% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed RNA polymerase II 135 kDa polypeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] >gi1... |
| Match: gi|125587272|gb|EAZ27936.1| |
score: 290 |
e-value: 5e-77 |
Identity: 96.53% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|15234572|ref|NP_193902.1| |
score: 287 |
e-value: 5e-76 |
Identity: 95.83% |
Span: 432bp (61.6%) |
Frame: 3 |
| NRPB2; DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] >gi21542437|sp|P38420.2|RPB2_ARATH RecName: F... |
| Match: gi|16486|emb|CAA79528.1| |
score: 287 |
e-value: 5e-76 |
Identity: 95.83% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Arabidopsis thaliana] |
| Match: gi|16488|emb|CAA79527.1| |
score: 287 |
e-value: 5e-76 |
Identity: 95.83% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Arabidopsis thaliana] |
| Match: gi|168027816|ref|XP_001766425.1| |
score: 284 |
e-value: 5e-75 |
Identity: 93.06% |
Span: 432bp (61.6%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162682334|gb|EDQ68753.1| predicted protein [Physcomitrella... |
| Match: gi|67810558|gb|AAY81998.1| |
score: 281 |
e-value: 3e-74 |
Identity: 93.06% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Spirogyra sp. UWCC FW670] |
| Match: gi|120407526|gb|AAY82000.2| |
score: 279 |
e-value: 1e-73 |
Identity: 91.67% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Coleochaete scutata] |
| Match: gi|68300804|gb|AAY89344.1| |
score: 278 |
e-value: 2e-73 |
Identity: 92.36% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Petunia x hybrida] |
| Match: gi|68300802|gb|AAY89343.1| |
score: 277 |
e-value: 6e-73 |
Identity: 90.28% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Antirrhinum majus] |
| Match: gi|68300799|gb|AAY89342.1| |
score: 275 |
e-value: 2e-72 |
Identity: 91.67% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Nicotiana sylvestris] |
| Match: gi|70794968|gb|AAZ08458.1| |
score: 274 |
e-value: 5e-72 |
Identity: 90.97% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Rhododendron macrophyllum] |
| Match: gi|68300807|gb|AAY89345.1| |
score: 273 |
e-value: 6e-72 |
Identity: 90.97% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA polymerase II second largest subunit [Solanum lycopersicum] |
| Match: gi|66806179|ref|XP_636812.1| |
score: 259 |
e-value: 2e-67 |
Identity: 84.03% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|66806179|ref|XP_636812.1| RNA polymerase II core subunit [Dictyostelium discoideum] >gi|60465215|gb|EAL63310.1| RN... |
| Match: gi|3746596|gb|AAC64013.1| |
score: 246 |
e-value: 8e-64 |
Identity: 94.31% |
Span: 369bp (52.6%) |
Frame: 3 |
| gi|3746596|gb|AAC64013.1| RNA polymerase II subunit 2 [Chironia linoides] |
| Match: gi|145340678|ref|XP_001415447.1| |
score: 245 |
e-value: 2e-63 |
Identity: 78.91% |
Span: 432bp (61.6%) |
Frame: 3 |
| predicted |
| Match: gi|116000401|emb|CAL50081.1| |
score: 245 |
e-value: 2e-63 |
Identity: 78.91% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|150951109|ref|XP_001387366.2| |
score: 242 |
e-value: 2e-62 |
Identity: 78.62% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-dependent |
| Match: gi|158291888|ref|XP_313416.3| |
score: 242 |
e-value: 2e-62 |
Identity: 77.62% |
Span: 429bp (61.2%) |
Frame: 3 |
| AGAP003648-PA |
| Match: gi|91090964|ref|XP_974653.1| |
score: 241 |
e-value: 4e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|125774869|ref|XP_001358686.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GA16485-PA |
| Match: gi|5514652|emb|CAA29180.2| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| gi|5514652|emb|CAA29180.2| RNA polymerase [Drosophila melanogaster] |
| Match: gi|193916095|gb|EDW14962.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GI23040 |
| Match: gi|194102563|gb|EDW24606.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GL24239 |
| Match: gi|156538773|ref|XP_001607902.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|190628505|gb|EDV44029.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GF16238 |
| Match: gi|190651591|gb|EDV48846.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GG16840 |
| Match: gi|194184008|gb|EDW97619.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GE24221 |
| Match: gi|193892751|gb|EDV91617.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GH19704 |
| Match: gi|194166758|gb|EDW81659.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GK12191 |
| Match: gi|193896154|gb|EDV95020.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| GH25170 |
| Match: gi|17136444|ref|NP_476706.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| gi|17136444|ref|NP_476706.1| RNA polymerase II 140kD subunit CG3180-PA [Drosophila melanogaster] gi|12644108|sp|P0826... |
| Match: gi|68475107|ref|XP_718439.1| |
score: 241 |
e-value: 3e-62 |
Identity: 77.93% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|68475107|ref|XP_718439.1| DNA-dependent RNA polymerase II [Candida albicans SC5314] >gi|68475648|ref|XP_718172.1| ... |
| Match: gi|194152856|gb|EDW68290.1| |
score: 241 |
e-value: 3e-62 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| RNA |
| Match: gi|170042980|ref|XP_001849183.1| |
score: 240 |
e-value: 7e-62 |
Identity: 76.22% |
Span: 429bp (61.2%) |
Frame: 3 |
| DNA-directed |
| Match: gi|169844839|ref|XP_001829140.1| |
score: 240 |
e-value: 6e-62 |
Identity: 79.17% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|149244118|ref|XP_001526602.1| |
score: 240 |
e-value: 7e-62 |
Identity: 77.93% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|70906409|gb|AAZ14928.1| |
score: 239 |
e-value: 2e-61 |
Identity: 78.47% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-dependent |
| Match: gi|164660997|ref|XP_001731621.1| |
score: 239 |
e-value: 1e-61 |
Identity: 75.35% |
Span: 426bp (60.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|194199414|gb|EDX12990.1| |
score: 239 |
e-value: 2e-61 |
Identity: 76.22% |
Span: 429bp (61.2%) |
Frame: 3 |
| GD18948 |
| Match: gi|189528264|ref|XP_001920494.1| |
score: 238 |
e-value: 4e-61 |
Identity: 76.39% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|190346609|gb|EDK38735.2| |
score: 238 |
e-value: 2e-61 |
Identity: 77.24% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|14587117|gb|AAK70487.1|AF387737_1 |
score: 238 |
e-value: 3e-61 |
Identity: 79.31% |
Span: 432bp (61.6%) |
Frame: 3 |
| RNA |
| Match: gi|47208444|emb|CAF93098.1| |
score: 238 |
e-value: 3e-61 |
Identity: 76.39% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|47208444|emb|CAF93098.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|152060509|sp|A5DHT2|RPB2_PICGU |
score: 238 |
e-value: 2e-61 |
Identity: 77.24% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|146418277|ref|XP_001485104.1| |
score: 238 |
e-value: 2e-61 |
Identity: 77.24% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|145408655|gb|ABP68348.1| |
score: 237 |
e-value: 5e-61 |
Identity: 77.24% |
Span: 432bp (61.6%) |
Frame: 3 |
| ribosomal |
| Match: gi|45198922|ref|NP_985951.1| |
score: 237 |
e-value: 5e-61 |
Identity: 77.24% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|45198922|ref|NP_985951.1| AFR404Cp [Eremothecium gossypii] >gi|44984951|gb|AAS53775.1| AFR404Cp [Eremothecium goss... |
| Match: gi|171677674|ref|XP_001903788.1| |
score: 236 |
e-value: 8e-61 |
Identity: 77.93% |
Span: 432bp (61.6%) |
Frame: 3 |
| unnamed |
| Match: gi|156372267|ref|XP_001628960.1| |
score: 235 |
e-value: 2e-60 |
Identity: 75.52% |
Span: 429bp (61.2%) |
Frame: 3 |
| predicted |
| Match: gi|50303683|ref|XP_451784.1| |
score: 235 |
e-value: 2e-60 |
Identity: 76.55% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|50303683|ref|XP_451784.1| unnamed protein product [Kluyveromyces lactis] >gi|49640916|emb|CAH02177.1| unnamed prot... |
| Match: gi|73975063|ref|XP_860777.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975063|ref|XP_860777.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|154707850|ref|NP_001092552.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA |
| Match: gi|73975079|ref|XP_861018.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975079|ref|XP_861018.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|90079569|dbj|BAE89464.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| unnamed |
| Match: gi|24418911|ref|NP_722493.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|24418911|ref|NP_722493.1| polymerase (RNA) II (DNA directed) polypeptide B [Mus musculus] gi|23512288|gb|AAH38472.... |
| Match: gi|73975073|ref|XP_860930.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975073|ref|XP_860930.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|73975077|ref|XP_860990.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975077|ref|XP_860990.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|73975061|ref|XP_860737.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975061|ref|XP_860737.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|57530101|ref|NP_001006448.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| polymerase |
| Match: gi|73975055|ref|XP_860639.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|109074756|ref|XP_001083325.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|3005758|gb|AAC09367.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|3005758|gb|AAC09367.1| RNA polymerase II 140 kDa subunit [Homo sapiens] |
| Match: gi|73975067|ref|XP_860838.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975067|ref|XP_860838.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|114594588|ref|XP_001136218.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|28881404|emb|CAD70445.1| |
score: 233 |
e-value: 9e-60 |
Identity: 75.86% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|28881404|emb|CAD70445.1| DNA-dependent RNA polymerase II RPB140 (RPB2) [Neurospora crassa] |
| Match: gi|73975075|ref|XP_860963.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975075|ref|XP_860963.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|194209129|ref|XP_001916826.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|73975065|ref|XP_860805.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975065|ref|XP_860805.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|73975069|ref|XP_860865.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975069|ref|XP_860865.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|73975071|ref|XP_860899.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975071|ref|XP_860899.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|2654279|emb|CAA47069.1| |
score: 233 |
e-value: 9e-60 |
Identity: 75.69% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|2654279|emb|CAA47069.1| DNA-directed RNA polymerase [Euplotes octocarinatus] |
| Match: gi|4505941|ref|NP_000929.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|4505941|ref|NP_000929.1| DNA directed RNA polymerase II polypeptide B; polymerase (RNA) II (DNA directed) polypept... |
| Match: gi|73975059|ref|XP_860708.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975059|ref|XP_860708.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|51702009|sp|Q8CFI7|RPB2_MOUSE |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|51702009|sp|Q8CFI7|RPB2_MOUSE DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase II subunit 2) (RP... |
| Match: gi|126331583|ref|XP_001362455.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| PREDICTED: |
| Match: gi|73975081|ref|XP_861044.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.92% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|73975081|ref|XP_861044.1| PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa polypeptide (RNA polymerase... |
| Match: gi|160331027|ref|XP_001712221.1| |
score: 232 |
e-value: 2e-59 |
Identity: 76.92% |
Span: 429bp (61.2%) |
Frame: 3 |
| rpb2 |
| Match: gi|170591608|ref|XP_001900562.1| |
score: 231 |
e-value: 3e-59 |
Identity: 71.33% |
Span: 429bp (61.2%) |
Frame: 3 |
| DNA-directed |
| Match: gi|6324725|ref|NP_014794.1| |
score: 231 |
e-value: 5e-59 |
Identity: 74.48% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|6324725|ref|NP_014794.1| second largest subunit of RNA polymerase II; Rpb2p [Saccharomyces cerevisiae] gi|2507349|... |
| Match: gi|50293059|ref|XP_448959.1| |
score: 231 |
e-value: 5e-59 |
Identity: 74.48% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|50293059|ref|XP_448959.1| unnamed protein product [Candida glabrata] >gi|49528272|emb|CAG61929.1| unnamed protein ... |
| Match: gi|8489819|gb|AAF75766.1|AF265351_1 |
score: 231 |
e-value: 3e-59 |
Identity: 72.22% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|172211|gb|AAA68096.1| |
score: 231 |
e-value: 5e-59 |
Identity: 74.48% |
Span: 432bp (61.6%) |
Frame: 3 |
| gi|172211|gb|AAA68096.1| RNA polymerase II 48 kd subunit |
| Match: gi|156065749|ref|XP_001598796.1| |
score: 230 |
e-value: 8e-59 |
Identity: 74.48% |
Span: 432bp (61.6%) |
Frame: 3 |
| hypothetical |
| Match: gi|67810650|gb|AAY82001.1| |
score: 230 |
e-value: 8e-59 |
Identity: 84.62% |
Span: 390bp (55.6%) |
Frame: 3 |
| RNA |
| Match: gi|154279576|ref|XP_001540601.1| |
score: 230 |
e-value: 6e-59 |
Identity: 75.86% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-directed |
| Match: gi|45545313|gb|AAS67504.1| |
score: 230 |
e-value: 6e-59 |
Identity: 78.1% |
Span: 408bp (58.2%) |
Frame: 3 |
| gi|45545313|gb|AAS67504.1| DNA-dependent RNA polymerase II second largest subunit [Candida tropicalis] |
| Match: gi|156835986|ref|XP_001642238.1| |
score: 229 |
e-value: 1e-58 |
Identity: 74.83% |
Span: 426bp (60.8%) |
Frame: 3 |
| hypothetical |
| Match: gi|157775493|ref|XP_001665812.1| |
score: 229 |
e-value: 1e-58 |
Identity: 70.63% |
Span: 429bp (61.2%) |
Frame: 3 |
| hypothetical |
| Match: gi|119489058|ref|XP_001262829.1| |
score: 229 |
e-value: 1e-58 |
Identity: 76.55% |
Span: 432bp (61.6%) |
Frame: 3 |
| DNA-dependent |
| Match: gi|17552304|ref|NP_498047.1| |
score: 229 |
e-value: 1e-58 |
Identity: 70.63% |
Span: 429bp (61.2%) |
Frame: 3 |
| gi|17552304|ref|NP_498047.1| RNA polymerase II subunit (3G33) [Caenorhabditis elegans] gi|2507348|sp|Q10578|RPB2_CAEE... |
|
| 150 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At4G21710.1 |
score: 287 |
e-value: 5e-78 |
Identity: 95.83% |
Span: 432bp (61.6%) |
Frame: 3 |
| Symbols: EMB1989, RPB2, NRPB2 | NRPB2 (EMBRYO DEFECTIVE 1989); DNA binding | chr4:11535696-11542212 REVERSE |
| Match: At5G45140.1 |
score: 164 |
e-value: 4e-41 |
Identity: 53.52% |
Span: 426bp (60.8%) |
Frame: 3 |
| Symbols: NRPC2 | NRPC2 (nuclear RNA polymerase C 2); DNA binding / DNA-directed RNA polymerase | chr5:18264643-18274... |
| Match: At3G23780.1 |
score: 141 |
e-value: 4e-34 |
Identity: 48.28% |
Span: 414bp (59.1%) |
Frame: 3 |
| Symbols: DRD2, NRPD2, NRPD2a | NRPD2a (NUCLEAR RNA POLYMERASE D 2A); DNA binding / DNA-directed RNA polymerase | chr... |
| Match: At3G18090.1 |
score: 139 |
e-value: 1e-33 |
Identity: 47.59% |
Span: 414bp (59.1%) |
Frame: 3 |
| Symbols: NRPD2b | NRPD2b (nuclear RNA polymerase D 2b); DNA binding / DNA-directed RNA polymerase | chr3:6195329-620... |
| Match: At1G29940.1 |
score: 116 |
e-value: 1e-26 |
Identity: 39.49% |
Span: 414bp (59.1%) |
Frame: 3 |
| Symbols: NRPA2 | NRPA2 (nuclear RNA polymerase A 2); DNA-directed RNA polymerase | chr1:10479306-10486654 REVERSE |
| Match: AtCG00190.1 |
score: 72.4 |
e-value: 2e-13 |
Identity: 43.02% |
Span: 258bp (36.8%) |
Frame: 3 |
| Symbols: RPOB | Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a... |
|
