| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270227777|emb|CBI16510.1| |
score: 127 |
e-value: 8e-31 |
Identity: 51.77% |
Span: 423bp (60.4%) |
Frame: 1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224052944|ref|XP_002297637.1| |
score: 112 |
e-value: 3e-26 |
Identity: 54.65% |
Span: 513bp (73.3%) |
Frame: 1 |
| predicted protein [Populus trichocarpa] >gi222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa] |
| Match: gi|255635455|gb|ACU18080.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 89.13% |
Span: 138bp (19.7%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255644989|gb|ACU22994.1| |
score: 93.2 |
e-value: 2e-17 |
Identity: 89.13% |
Span: 138bp (19.7%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|225435731|ref|XP_002285703.1| |
score: 90.5 |
e-value: 1e-16 |
Identity: 85.11% |
Span: 141bp (20.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255582554|ref|XP_002532060.1| |
score: 87.4 |
e-value: 1e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| serine/arginine rich splicing factor, putative [Ricinus communis] >gi223528264|gb|EEF30315.1| serine/arginine rich sp... |
| Match: gi|255581554|ref|XP_002531582.1| |
score: 87.4 |
e-value: 1e-15 |
Identity: 82.98% |
Span: 141bp (20.1%) |
Frame: 1 |
| serine/arginine rich splicing factor, putative [Ricinus communis] >gi223528778|gb|EEF30785.1| serine/arginine rich sp... |
| Match: gi|212723388|ref|NP_001131976.1| |
score: 87 |
e-value: 2e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| hypothetical protein LOC100193374 [Zea mays] >gi194693082|gb|ACF80625.1| unknown [Zea mays] >gi|195620736|gb|ACG32198... |
| Match: gi|242046420|ref|XP_002461081.1| |
score: 87 |
e-value: 2e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_02g040350 [Sorghum bicolor] >gi241924458|gb|EER97602.1| hypothetical protein SORBIDRA... |
| Match: gi|226493261|ref|NP_001151991.1| |
score: 87 |
e-value: 2e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| LOC100285628 [Zea mays] >gi195651649|gb|ACG45292.1| splicing factor, arginine/serine-rich 4 [Zea mays] |
| Match: gi|195631119|gb|ACG36660.1| |
score: 87 |
e-value: 2e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| splicing factor, arginine/serine-rich 4 [Zea mays] >gi195642888|gb|ACG40912.1| splicing factor, arginine/serine-rich ... |
| Match: gi|194688600|gb|ACF78384.1| |
score: 87 |
e-value: 2e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| unknown [Zea mays] >gi194700100|gb|ACF84134.1| unknown [Zea mays] >gi|219887871|gb|ACL54310.1| unknown [Zea mays] >gi... |
| Match: gi|9843661|emb|CAC03604.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 84.44% |
Span: 135bp (19.3%) |
Frame: 1 |
| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana] |
| Match: gi|15231285|ref|NP_187966.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 84.44% |
Span: 135bp (19.3%) |
Frame: 1 |
| SCL30a; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi13878011|gb|AAK44083.1|AF37... |
| Match: gi|255674538|dbj|BAH92171.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 82.61% |
Span: 138bp (19.7%) |
Frame: 1 |
| Os03g0374575 [Oryza sativa Japonica Group] |
| Match: gi|115453225|ref|NP_001050213.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 82.61% |
Span: 138bp (19.7%) |
Frame: 1 |
| Os03g0374500 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|108708411|gb|ABF96206.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 82.61% |
Span: 138bp (19.7%) |
Frame: 1 |
| RNA recognition motif family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31249706|gb|AAP46199.1| |
score: 85.5 |
e-value: 4e-15 |
Identity: 82.61% |
Span: 138bp (19.7%) |
Frame: 1 |
| putative splicing factor [Oryza sativa Japonica Group] >gi108708412|gb|ABF96207.1| RNA recognition motif family prote... |
| Match: gi|240254272|ref|NP_564685.4| |
score: 85.1 |
e-value: 6e-15 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| SR33; RNA binding / protein binding [Arabidopsis thaliana] >gi6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich p... |
| Match: gi|240254274|ref|NP_001031195.4| |
score: 85.1 |
e-value: 6e-15 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| SR33; RNA binding / protein binding [Arabidopsis thaliana] |
| Match: gi|15293081|gb|AAK93651.1| |
score: 85.1 |
e-value: 6e-15 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|12323160|gb|AAG51556.1|AC027034_2 |
score: 85.1 |
e-value: 6e-15 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| unknown protein; 47745-45927 [Arabidopsis thaliana] |
| Match: gi|242035637|ref|XP_002465213.1| |
score: 84.7 |
e-value: 8e-15 |
Identity: 84.78% |
Span: 138bp (19.7%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_01g034200 [Sorghum bicolor] >gi241919067|gb|EER92211.1| hypothetical protein SORBIDRA... |
| Match: gi|270227777|emb|CBI16510.1| |
score: 32 |
e-value: 8e-31 |
Identity: 68.42% |
Span: 57bp (8.1%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|224052944|ref|XP_002297637.1| |
score: 31.2 |
e-value: 3e-26 |
Identity: 68.42% |
Span: 57bp (8.1%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222844895|gb|EEE82442.1| predicted protein [Populus trichocarpa] |
|
| 5 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 11 hits recorded |
| Match: At3G13570.1 |
score: 85.5 |
e-value: 3e-17 |
Identity: 84.44% |
Span: 135bp (19.3%) |
Frame: 1 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
| Match: At1G55310.1 |
score: 85.1 |
e-value: 4e-17 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At1G55310.2 |
score: 85.1 |
e-value: 4e-17 |
Identity: 83.12% |
Span: 231bp (33.0%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At5G18810.1 |
score: 67.8 |
e-value: 6e-12 |
Identity: 60.42% |
Span: 144bp (20.6%) |
Frame: 1 |
| Symbols: SCL28 | SCL28 (SC35-like splicing factor 28); RNA binding | chr5:6268927-6271160 REVERSE |
| Match: At3G55460.1 |
score: 66.6 |
e-value: 1e-11 |
Identity: 63.41% |
Span: 123bp (17.6%) |
Frame: 1 |
| Symbols: SCL30 | SCL30 (SC35-like splicing factor 30); RNA binding | chr3:20572001-20574479 FORWARD |
| Match: At1G55310.2 |
score: 51.6 |
e-value: 2e-11 |
Identity: 75% |
Span: 84bp (12.0%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At1G55310.1 |
score: 51.6 |
e-value: 2e-11 |
Identity: 75% |
Span: 84bp (12.0%) |
Frame: 1 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At3G13570.1 |
score: 51.6 |
e-value: 2e-11 |
Identity: 71.43% |
Span: 84bp (12.0%) |
Frame: 1 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
| Match: At1G55310.2 |
score: 34.7 |
e-value: 2e-11 |
Identity: 78.95% |
Span: 57bp (8.1%) |
Frame: 3 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636240 FORWARD |
| Match: At1G55310.1 |
score: 34.7 |
e-value: 2e-11 |
Identity: 78.95% |
Span: 57bp (8.1%) |
Frame: 3 |
| Symbols: ATSCL33, SCL33, SR33 | SR33 (SC35-like splicing factor 33); RNA binding | chr1:20634343-20636161 FORWARD |
| Match: At3G13570.1 |
score: 34.7 |
e-value: 2e-11 |
Identity: 78.95% |
Span: 57bp (8.1%) |
Frame: 3 |
| Symbols: SCL30a | SCL30a (SC35-like splicing factor 30a); RNA binding | chr3:4429571-4431609 REVERSE |
|
| swissprot [blastx] | Showing best 0 hits recorded |
|
