| genbank/nr [blastx] | Showing best 59 hits recorded |
| Match: gi|48210057|gb|AAT40556.1| |
score: 57.77 |
e-value: 2.6e-21 |
Identity: 41.18% |
Span: 204bp (29.6%) |
Frame: 3 |
| gi|48210057|gb|AAT40556.1| hypothetical protein PGEC542.21 [Solanum demissum] |
| Match: gi|42407880|dbj|BAD09021.1| |
score: 57 |
e-value: 3.3e-07 |
Identity: 34.07% |
Span: 273bp (39.6%) |
Frame: 3 |
| gi|42407880|dbj|BAD09021.1| cyst nematode resistance protein-like [Oryza sativa (japonica cultivar-group)] gi|4240798... |
| Match: gi|15451617|gb|AAK98741.1| |
score: 56.22 |
e-value: 5.6e-07 |
Identity: 34.04% |
Span: 282bp (40.9%) |
Frame: 3 |
| gi|15451617|gb|AAK98741.1| Hypothetical protein similar to putative retroelements [Oryza sativa] gi|27497213|gb|AAO17... |
| Match: gi|40253549|dbj|BAD05496.1| |
score: 53.53 |
e-value: 3.7e-06 |
Identity: 36.14% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|40253549|dbj|BAD05496.1| cyst nematode resistance protein-like protein [Oryza sativa (japonica cultivar-group)] gi... |
| Match: gi|8096424|dbj|BAA95894.1| |
score: 51.22 |
e-value: 1.8e-05 |
Identity: 31.31% |
Span: 297bp (43.1%) |
Frame: 3 |
| gi|8096424|dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC F13B15; putative non-LTR retroelement reve... |
| Match: gi|34899184|ref|NP_910938.1| |
score: 49.29 |
e-value: 6.9e-05 |
Identity: 32.93% |
Span: 246bp (35.7%) |
Frame: 3 |
| gi|34899184|ref|NP_910938.1| hypothetical protein~predicted by GeneMark.hmm etc. [Oryza sativa (japonica cultivar-gro... |
| Match: gi|8778279|gb|AAF79288.1| |
score: 48.91 |
e-value: 9e-05 |
Identity: 35.71% |
Span: 231bp (33.5%) |
Frame: 3 |
| gi|8778279|gb|AAF79288.1| F14D16.18 [Arabidopsis thaliana] |
| Match: gi|15221925|ref|NP_173337.1| |
score: 48.91 |
e-value: 9e-05 |
Identity: 35.71% |
Span: 231bp (33.5%) |
Frame: 3 |
| gi|15221925|ref|NP_173337.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|34898982|ref|NP_910837.1| |
score: 48.91 |
e-value: 9e-05 |
Identity: 40% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|34898982|ref|NP_910837.1| contains EST AU096098(S12159)~putative RNA-directed DNA polymerase [Oryza sativa (japoni... |
| Match: gi|34913456|ref|NP_918075.1| |
score: 48.52 |
e-value: 0.00012 |
Identity: 32.58% |
Span: 264bp (38.3%) |
Frame: 3 |
| gi|34913456|ref|NP_918075.1| P0702H08.17 [Oryza sativa (japonica cultivar-group)] gi|20521347|dbj|BAB91860.1| P0702H0... |
| Match: gi|16905230|gb|AAL31100.1| |
score: 48.52 |
e-value: 0.00012 |
Identity: 32.94% |
Span: 255bp (37.0%) |
Frame: 3 |
| gi|16905230|gb|AAL31100.1| hypothetical protein [Oryza sativa] |
| Match: gi|37534230|ref|NP_921417.1| |
score: 48.52 |
e-value: 0.00012 |
Identity: 36.23% |
Span: 207bp (30.0%) |
Frame: 3 |
| gi|37534230|ref|NP_921417.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa (japonica cultivar-gr... |
| Match: gi|34907538|ref|NP_915116.1| |
score: 47.37 |
e-value: 0.00026 |
Identity: 31.52% |
Span: 276bp (40.1%) |
Frame: 3 |
| gi|34907538|ref|NP_915116.1| B1078G07.7 [Oryza sativa (japonica cultivar-group)] gi|20161262|dbj|BAB90188.1| B1078G07... |
| Match: gi|22725974|gb|AAN04974.1| |
score: 46.59 |
e-value: 0.00045 |
Identity: 26.42% |
Span: 291bp (42.2%) |
Frame: 3 |
| gi|22725974|gb|AAN04974.1| putative reverse transcriptase, 5'-partial [Oryza sativa (japonica cultivar-group)] |
| Match: gi|48210057|gb|AAT40556.1| |
score: 46.59 |
e-value: 2.6e-21 |
Identity: 44.44% |
Span: 135bp (19.6%) |
Frame: 2 |
| gi|48210057|gb|AAT40556.1| hypothetical protein PGEC542.21 [Solanum demissum] |
| Match: gi|37531876|ref|NP_920240.1| |
score: 46.59 |
e-value: 0.00045 |
Identity: 26.42% |
Span: 291bp (42.2%) |
Frame: 3 |
| gi|37531876|ref|NP_920240.1| putative reverse transcriptase. [Oryza sativa (japonica cultivar-group)] gi|21450442|gb|... |
| Match: gi|33465891|gb|AAQ19327.1| |
score: 46.59 |
e-value: 0.00045 |
Identity: 26.42% |
Span: 291bp (42.2%) |
Frame: 3 |
| gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536094|ref|NP_922349.1| |
score: 46.59 |
e-value: 0.00045 |
Identity: 26.42% |
Span: 291bp (42.2%) |
Frame: 3 |
| gi|37536094|ref|NP_922349.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13786450|gb|A... |
| Match: gi|31044099|dbj|BAC15618.2| |
score: 45.44 |
e-value: 0.001 |
Identity: 32.31% |
Span: 195bp (28.3%) |
Frame: 3 |
| gi|31044099|dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25405244|pir||E96519 |
score: 45.05 |
e-value: 0.001 |
Identity: 27.17% |
Span: 255bp (37.0%) |
Frame: 3 |
| gi|25405244|pir||E96519 probable reverse transcriptase, 16838-20266 [imported] - Arabidopsis thaliana gi|12323627|gb|... |
| Match: gi|38346716|emb|CAE04866.2| |
score: 45.05 |
e-value: 0.001 |
Identity: 25.25% |
Span: 261bp (37.9%) |
Frame: 3 |
| gi|38346716|emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536428|ref|NP_922516.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 29.35% |
Span: 276bp (40.1%) |
Frame: 3 |
| gi|37536428|ref|NP_922516.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|18057094|gb|A... |
| Match: gi|34906774|ref|NP_914734.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 32.2% |
Span: 177bp (25.7%) |
Frame: 3 |
| gi|34906774|ref|NP_914734.1| gag-pol polyprotein -like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34896002|ref|NP_909345.1| |
score: 44.67 |
e-value: 0.002 |
Identity: 28.26% |
Span: 276bp (40.1%) |
Frame: 3 |
| gi|34896002|ref|NP_909345.1| Similar to Arabidopsis thaliana chromosome II BAC F13B15; putative non-LTR retroelement ... |
| Match: gi|45267888|gb|AAS55787.1| |
score: 43.9 |
e-value: 0.003 |
Identity: 25.81% |
Span: 252bp (36.6%) |
Frame: 3 |
| gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34904884|ref|NP_913789.1| |
score: 43.51 |
e-value: 0.004 |
Identity: 29.17% |
Span: 285bp (41.4%) |
Frame: 3 |
| gi|34904884|ref|NP_913789.1| similar to reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|24417209|db... |
| Match: gi|38344244|emb|CAD41337.2| |
score: 43.51 |
e-value: 0.004 |
Identity: 25.77% |
Span: 255bp (37.0%) |
Frame: 3 |
| OJ991113_30.21 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906350|ref|NP_914522.1| |
score: 43.13 |
e-value: 0.005 |
Identity: 30.68% |
Span: 264bp (38.3%) |
Frame: 3 |
| gi|34906350|ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|9558497|dbj|BAB03416... |
| Match: gi|32483159|emb|CAE02147.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 25.81% |
Span: 252bp (36.6%) |
Frame: 3 |
| gi|32483159|emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37531298|ref|NP_919951.1| |
score: 42.36 |
e-value: 0.008 |
Identity: 27.08% |
Span: 288bp (41.8%) |
Frame: 3 |
| gi|37531298|ref|NP_919951.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22655797|gb|AAN04214.1... |
| Match: gi|34894462|ref|NP_908556.1| |
score: 41.97 |
e-value: 0.011 |
Identity: 30.91% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|34894462|ref|NP_908556.1| OSJNBa0025P13.26 [Oryza sativa (japonica cultivar-group)] gi|34905430|ref|NP_914062.1| P... |
| Match: gi|34897770|ref|NP_910231.1| |
score: 41.97 |
e-value: 0.011 |
Identity: 30.91% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|34897770|ref|NP_910231.1| Similar to Arabidopsis thaliana chromosome II BAC F9O13 genomic sequence, putative non-L... |
| Match: gi|18568267|gb|AAL75999.1| |
score: 41.97 |
e-value: 0.011 |
Identity: 36.36% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|18568267|gb|AAL75999.1| putative polyprotein [Zea mays] |
| Match: gi|22208512|gb|AAM94327.1| |
score: 41.97 |
e-value: 0.011 |
Identity: 41.27% |
Span: 183bp (26.6%) |
Frame: 3 |
| gi|22208512|gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor] |
| Match: gi|32489851|emb|CAE05715.1| |
score: 41.97 |
e-value: 0.011 |
Identity: 31.33% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|32489851|emb|CAE05715.1| OSJNBb0065J09.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|4914318|gb|AAD32866.1| |
score: 41.59 |
e-value: 0.014 |
Identity: 31.82% |
Span: 195bp (28.3%) |
Frame: 3 |
| gi|4914318|gb|AAD32866.1| F14N23.4 [Arabidopsis thaliana] |
| Match: gi|46805945|dbj|BAD17239.1| |
score: 41.2 |
e-value: 0.019 |
Identity: 30.49% |
Span: 246bp (35.7%) |
Frame: 3 |
| gi|46805945|dbj|BAD17239.1| cyst nematode resistance protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34895828|ref|NP_909258.1| |
score: 40.82 |
e-value: 0.024 |
Identity: 27.71% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|34895828|ref|NP_909258.1| P0434B04.24 [Oryza sativa (japonica cultivar-group)] gi|13872896|dbj|BAB44003.1| P0434B0... |
| Match: gi|7488322|pir||T00814 |
score: 40.82 |
e-value: 0.024 |
Identity: 27.66% |
Span: 252bp (36.6%) |
Frame: 3 |
| gi|7488322|pir||T00814 RNA-directed DNA polymerase homolog At2g41580 - Arabidopsis thaliana gi|2618693|gb|AAB84340.1|... |
| Match: gi|38344358|emb|CAE04079.2| |
score: 40.82 |
e-value: 0.024 |
Identity: 32.81% |
Span: 192bp (27.9%) |
Frame: 3 |
| gi|38344358|emb|CAE04079.2| OSJNBb0032D24.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|39546208|emb|CAE04633.3| |
score: 40.82 |
e-value: 0.024 |
Identity: 27.59% |
Span: 261bp (37.9%) |
Frame: 3 |
| gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15230827|ref|NP_189164.1| |
score: 40.43 |
e-value: 0.032 |
Identity: 32.73% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|15230827|ref|NP_189164.1| hypothetical protein [Arabidopsis thaliana] gi|9294184|dbj|BAB02086.1| reverse transcrip... |
| Match: gi|37536206|ref|NP_922405.1| |
score: 40.43 |
e-value: 0.032 |
Identity: 25.42% |
Span: 177bp (25.7%) |
Frame: 3 |
| gi|37536206|ref|NP_922405.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|27311287|gb|A... |
| Match: gi|37531274|ref|NP_919939.1| |
score: 40.43 |
e-value: 0.032 |
Identity: 31.58% |
Span: 171bp (24.8%) |
Frame: 3 |
| gi|37531274|ref|NP_919939.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22655725|gb|AAN04142.1... |
| Match: gi|25412331|pir||G84649 |
score: 40.43 |
e-value: 0.032 |
Identity: 28.26% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|25412331|pir||G84649 hypothetical protein At2g25550 [imported] - Arabidopsis thaliana gi|4432866|gb|AAD20714.1| pu... |
| Match: gi|25403000|pir||H86373 |
score: 40.43 |
e-value: 0.032 |
Identity: 32.73% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|25403000|pir||H86373 protein T23E23.16 [imported] - Arabidopsis thaliana gi|9369395|gb|AAF87143.1| T23E23.16 [Arab... |
| Match: gi|15232695|ref|NP_187562.1| |
score: 40.43 |
e-value: 0.032 |
Identity: 28.26% |
Span: 249bp (36.1%) |
Frame: 3 |
| nucleic acid binding [Arabidopsis thaliana] >gi6682231|gb|AAF23283.1|AC016661_8 putative non-LTR reverse transcriptas... |
| Match: gi|48210057|gb|AAT40556.1| |
score: 40.05 |
e-value: 2.6e-21 |
Identity: 35.94% |
Span: 174bp (25.3%) |
Frame: 1 |
| gi|48210057|gb|AAT40556.1| hypothetical protein PGEC542.21 [Solanum demissum] |
| Match: gi|25408166|pir||G84721 |
score: 40.05 |
e-value: 0.042 |
Identity: 28.26% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|25408166|pir||G84721 hypothetical protein At2g31520 [imported] - Arabidopsis thaliana gi|4582447|gb|AAD24831.1| pu... |
| Match: gi|34902216|ref|NP_912454.1| |
score: 40.05 |
e-value: 0.042 |
Identity: 31.33% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|34902216|ref|NP_912454.1| Putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|27452911|gb|A... |
| Match: gi|7486711|pir||T01893 |
score: 40.05 |
e-value: 0.042 |
Identity: 26.83% |
Span: 225bp (32.7%) |
Frame: 3 |
| gi|7486711|pir||T01893 hypothetical protein F8M12.22 - Arabidopsis thaliana gi|3513745|gb|AAC33961.1| contains simila... |
| Match: gi|30102994|gb|AAP21407.1| |
score: 39.28 |
e-value: 0.071 |
Identity: 30.12% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|30102994|gb|AAP21407.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37534662|ref|NP_921633.1| |
score: 38.89 |
e-value: 0.093 |
Identity: 42.86% |
Span: 147bp (21.3%) |
Frame: 3 |
| gi|37534662|ref|NP_921633.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|34911250|ref|NP_916972.1| |
score: 38.89 |
e-value: 0.093 |
Identity: 40.48% |
Span: 126bp (18.3%) |
Frame: 3 |
| gi|34911250|ref|NP_916972.1| P0445E10.23 [Oryza sativa (japonica cultivar-group)] gi|19386681|dbj|BAB86063.1| P0445E1... |
| Match: gi|34392566|dbj|BAC82613.1| |
score: 38.89 |
e-value: 0.093 |
Identity: 31.25% |
Span: 192bp (27.9%) |
Frame: 3 |
| gi|34392566|dbj|BAC82613.1| pol-like protein [Danio rerio] |
| Match: gi|38347073|emb|CAD41559.2| |
score: 38.89 |
e-value: 0.093 |
Identity: 30.12% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|38347073|emb|CAD41559.2| OSJNBa0006A01.14 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|11357921|pir||T47495 |
score: 38.89 |
e-value: 0.093 |
Identity: 29.09% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|11357921|pir||T47495 hypothetical protein F9K21.130 - Arabidopsis thaliana gi|6996258|emb|CAB75484.1| putative pro... |
| Match: gi|34902072|ref|NP_912382.1| |
score: 38.89 |
e-value: 0.093 |
Identity: 30.12% |
Span: 249bp (36.1%) |
Frame: 3 |
| gi|34902072|ref|NP_912382.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|29893670|gb|AAP06924.1|... |
| Match: gi|37530474|ref|NP_919539.1| |
score: 38.89 |
e-value: 0.093 |
Identity: 30.91% |
Span: 165bp (23.9%) |
Frame: 3 |
| gi|37530474|ref|NP_919539.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920089|gb|AAM08521.1... |
|
