All Stored BLAST annotations for SGN-U185390
genbank/nr [blastx] Showing best 100 hits recorded
Match: gi|15237896|ref|NP_197800.1| score: 145.2 e-value: 9.9e-69 Identity: 64.42% Span: 312bp (46.2%) Frame: 2
SIGE (SIGMA FACTOR E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha...
Match: gi|15237896|ref|NP_197800.1| score: 137.9 e-value: 9.9e-69 Identity: 94.52% Span: 219bp (32.4%) Frame: 3
SIGE (SIGMA FACTOR E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor [Arabidopsis tha...
Match: gi|30698488|dbj|BAC76601.1| score: 127.5 e-value: 3.6e-59 Identity: 83.56% Span: 219bp (32.4%) Frame: 3
gi|30698488|dbj|BAC76601.1| Sig5 [Oryza sativa (japonica cultivar-group)] gi|30698518|dbj|BAC76607.1| plastid sigma f...
Match: gi|30698488|dbj|BAC76601.1| score: 123.6 e-value: 3.6e-59 Identity: 57.14% Span: 294bp (43.6%) Frame: 2
gi|30698488|dbj|BAC76601.1| Sig5 [Oryza sativa (japonica cultivar-group)] gi|30698518|dbj|BAC76607.1| plastid sigma f...
Match: gi|17232755|ref|NP_489303.1| score: 71.25 e-value: 6.3e-17 Identity: 50% Span: 228bp (33.8%) Frame: 3
RNA polymerase sigma factor RpoD [Nostoc sp. PCC 7120] >gi75907632|ref|YP_321928.1| RNA polymerase sigma factor RpoD ...
Match: gi|23128093|ref|ZP_00109949.1| score: 71.25 e-value: 6.3e-17 Identity: 50% Span: 228bp (33.8%) Frame: 3
gi|23128093|ref|ZP_00109949.1| hypothetical protein [Nostoc punctiforme] gi|8118663|gb|AAF73062.1| primary vegetative...
Match: gi|16332132|ref|NP_442860.1| score: 70.86 e-value: 2.9e-17 Identity: 48.68% Span: 228bp (33.8%) Frame: 3
gi|16332132|ref|NP_442860.1| RNA polymerase sigma factor [Synechocystis sp. PCC 6803] gi|7434770|pir||S76760 transcri...
Match: gi|1710685|sp|P52322|RPSD_MICAE score: 70.86 e-value: 4.8e-17 Identity: 48.68% Span: 228bp (33.8%) Frame: 3
gi|1710685|sp|P52322|RPSD_MICAE RNA POLYMERASE SIGMA FACTOR RPOD1 gi|2117922|pir||JC4952 transcription initiation fac...
Match: gi|32034495|ref|ZP_00134667.1| score: 70.48 e-value: 2.2e-17 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|32034495|ref|ZP_00134667.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Actinobacillus ...
Match: gi|33151868|ref|NP_873221.1| score: 70.48 e-value: 2.2e-17 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|33151868|ref|NP_873221.1| RNA polymerase sigma factor; sigma70 [Haemophilus ducreyi 35000HP] gi|33148089|gb|AAP956...
Match: gi|23041419|ref|ZP_00072877.1| score: 69.71 e-value: 8.7e-16 Identity: 48.68% Span: 228bp (33.8%) Frame: 3
gi|23041419|ref|ZP_00072877.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Trichodesmium e...
Match: gi|32030248|ref|ZP_00133133.1| score: 68.94 e-value: 6.3e-17 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|32030248|ref|ZP_00133133.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Haemophilus som...
Match: gi|33519536|ref|NP_878368.1| score: 68.55 e-value: 1.4e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|33519536|ref|NP_878368.1| RNA polymerase sigma-70 factor [Candidatus Blochmannia floridanus] gi|33517199|emb|CAD83...
Match: gi|23022229|ref|ZP_00061848.1| score: 68.55 e-value: 1.3e-17 Identity: 46.58% Span: 219bp (32.4%) Frame: 3
gi|23022229|ref|ZP_00061848.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Clostridium the...
Match: gi|16272477|ref|NP_438691.1| score: 68.55 e-value: 2.2e-17 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|16272477|ref|NP_438691.1| RNA polymerase sigma-70 factor [Haemophilus influenzae Rd] gi|1173125|sp|P43766|RPSD_HAE...
Match: gi|15603106|ref|NP_246178.1| score: 68.55 e-value: 1.1e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|15603106|ref|NP_246178.1| RpoD [Pasteurella multocida] gi|12721597|gb|AAK03325.1| RpoD [Pasteurella multocida]
Match: gi|34499217|ref|NP_903432.1| score: 68.17 e-value: 1.1e-15 Identity: 43.06% Span: 216bp (32.0%) Frame: 3
gi|34499217|ref|NP_903432.1| RNA polymerase sigma factor RpoD [Chromobacterium violaceum ATCC 12472] gi|34105068|gb|A...
Match: gi|1588486|prf||2208419B score: 67.78 e-value: 1.4e-16 Identity: 47.37% Span: 228bp (33.8%) Frame: 3
RNA polymerase sigma factor
Match: gi|558881|gb|AAB41506.1| score: 67.78 e-value: 1.4e-16 Identity: 47.37% Span: 228bp (33.8%) Frame: 3
gi|558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002]
Match: gi|5030433|gb|AAC44889.2| score: 67.78 e-value: 5.1e-16 Identity: 49.3% Span: 210bp (31.1%) Frame: 3
gi|5030433|gb|AAC44889.2| sigma 70-type sigma factor SigA [Thermotoga maritima]
Match: gi|15644200|ref|NP_229250.1| score: 67.78 e-value: 5.1e-16 Identity: 49.3% Span: 210bp (31.1%) Frame: 3
gi|15644200|ref|NP_229250.1| RNA polymerase sigma-A factor [Thermotoga maritima] gi|6831649|sp|P77994|RPSD_THEMA RNA ...
Match: gi|28210583|ref|NP_781527.1| score: 67.4 e-value: 3.8e-17 Identity: 43.42% Span: 225bp (33.3%) Frame: 3
gi|28210583|ref|NP_781527.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28203021|gb|AAO35464.1| RNA...
Match: gi|28897178|ref|NP_796783.1| score: 67.01 e-value: 5.1e-16 Identity: 41.67% Span: 216bp (32.0%) Frame: 3
gi|28897178|ref|NP_796783.1| RNA polymerase sigma factor RpoD [Vibrio parahaemolyticus RIMD 2210633] gi|28805387|dbj|...
Match: gi|217140|dbj|BAA01749.1| score: 66.63 e-value: 8.7e-16 Identity: 46.05% Span: 228bp (33.8%) Frame: 3
gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.]
Match: gi|21672345|ref|NP_660412.1| score: 66.63 e-value: 6.6e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|21672345|ref|NP_660412.1| RNA polymerase sigma factor RpoD [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|...
Match: gi|15616680|ref|NP_239892.1| score: 66.63 e-value: 6.6e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|15616680|ref|NP_239892.1| RNA polymerase sigma factor RpoD [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi...
Match: gi|37522141|ref|NP_925518.1| score: 66.63 e-value: 5.1e-16 Identity: 46.05% Span: 228bp (33.8%) Frame: 3
gi|37522141|ref|NP_925518.1| principal RNA polymerase sigma factor [Gloeobacter violaceus] gi|35213141|dbj|BAC90513.1...
Match: gi|97628|pir||S24172 score: 66.63 e-value: 8.7e-16 Identity: 46.05% Span: 228bp (33.8%) Frame: 3
gi|97628|pir||S24172 transcription initiation factor sigma A - Synechococcus sp
Match: gi|20808174|ref|NP_623345.1| score: 66.24 e-value: 1e-17 Identity: 43.84% Span: 219bp (32.4%) Frame: 3
gi|20808174|ref|NP_623345.1| DNA-directed RNA polymerase sigma subunits (sigma70/sigma32) [Thermoanaerobacter tengcon...
Match: gi|16120968|ref|NP_404281.1| score: 65.85 e-value: 3.9e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|16120968|ref|NP_404281.1| RNA polymerase sigma factor RpoD [Yersinia pestis] gi|25288440|pir||AF0079 RNA polymeras...
Match: gi|37527834|ref|NP_931179.1| score: 65.85 e-value: 3.9e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|37527834|ref|NP_931179.1| RNA polymerase sigma factor rpoD (Sigma-70) [Photorhabdus luminescens subsp. laumondii T...
Match: gi|37678745|ref|NP_933354.1| score: 65.85 e-value: 1.1e-15 Identity: 41.67% Span: 216bp (32.0%) Frame: 3
gi|37678745|ref|NP_933354.1| RNA polymerase sigma factor RpoD [Vibrio vulnificus YJ016] gi|37197486|dbj|BAC93325.1| R...
Match: gi|22127411|ref|NP_670834.1| score: 65.85 e-value: 3.9e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|22127411|ref|NP_670834.1| RNA polymerase, sigma(70) factor [Yersinia pestis KIM] gi|21960500|gb|AAM87085.1| RNA po...
Match: gi|28211633|ref|NP_782577.1| score: 65.85 e-value: 1.3e-17 Identity: 43.84% Span: 219bp (32.4%) Frame: 3
gi|28211633|ref|NP_782577.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28204075|gb|AAO36514.1| RNA...
Match: gi|3646419|emb|CAA07705.1| score: 65.47 e-value: 6.6e-16 Identity: 41.67% Span: 216bp (32.0%) Frame: 3
gi|3646419|emb|CAA07705.1| sigma-70 factor [Pseudomonas tolaasii]
Match: gi|26987129|ref|NP_742554.1| score: 65.47 e-value: 6.6e-16 Identity: 41.67% Span: 216bp (32.0%) Frame: 3
gi|26987129|ref|NP_742554.1| RNA polymerase sigma factor RpoD [Pseudomonas putida KT2440] gi|2654492|gb|AAB87749.1| D...
Match: gi|1173127|sp|P43344|RPSD_SERMA score: 65.47 e-value: 5.2e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|1173127|sp|P43344|RPSD_SERMA RNA POLYMERASE SIGMA FACTOR RPOD (SIGMA-70)
Match: gi|133311|sp|P07336|RPSD_SALTY score: 65.08 e-value: 6.6e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|133311|sp|P07336|RPSD_SALTY RNA polymerase sigma factor rpoD (Sigma-70) gi|66994|pir||RNEBST transcription initiat...
Match: gi|15803609|ref|NP_289642.1| score: 65.08 e-value: 6.6e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|15803609|ref|NP_289642.1| RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures [E...
Match: gi|1072030|gb|AAB60181.1| score: 65.08 e-value: 6.6e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|1072030|gb|AAB60181.1| RNA polymerase sigma-subunit
Match: gi|16766511|ref|NP_462126.1| score: 65.08 e-value: 6.6e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|16766511|ref|NP_462126.1| sigma D (sigma 70) factor of RNA polymerase, major sigma factor during exponential growt...
Match: gi|26249652|ref|NP_755692.1| score: 65.08 e-value: 6.7e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|26249652|ref|NP_755692.1| RpoD protein [Escherichia coli CFT073] gi|26110080|gb|AAN82266.1| RpoD protein [Escheric...
Match: gi|16761985|ref|NP_457602.1| score: 65.08 e-value: 6.6e-16 Identity: 39.47% Span: 228bp (33.8%) Frame: 3
gi|16761985|ref|NP_457602.1| RNA polymerase sigma-70 factor [Salmonella enterica subsp. enterica serovar Typhi] gi|29...
Match: gi|23428541|gb|AAL11450.1| score: 64.7 e-value: 8.6e-16 Identity: 40.79% Span: 228bp (33.8%) Frame: 3
gi|23428541|gb|AAL11450.1| RNA polymerase sigma-70 subunit [Pantoea agglomerans]
Match: gi|1710683|sp|P52328|RSD2_LEPIN score: 63.16 e-value: 2.3e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|1710683|sp|P52328|RSD2_LEPIN RNA polymerase sigma factor rpoD gi|149623|gb|AAA25264.1| RNA polymerase sigma-subunit
Match: gi|30022370|ref|NP_834001.1| score: 63.16 e-value: 5.1e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|30022370|ref|NP_834001.1| RNA polymerase sigma factor rpoD [Bacillus cereus ATCC 14579] gi|29897928|gb|AAP11202.1|...
Match: gi|3062909|dbj|BAA25730.1| score: 63.16 e-value: 6.7e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|3062909|dbj|BAA25730.1| SigA [Bacillus sp.]
Match: gi|21402338|ref|NP_658323.1| score: 63.16 e-value: 5.1e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|21402338|ref|NP_658323.1| sigma70, Sigma-70 factor [Bacillus anthracis A2012] gi|30264362|ref|NP_846739.1| RNA pol...
Match: gi|16079575|ref|NP_390399.1| score: 63.16 e-value: 1.4e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|16079575|ref|NP_390399.1| RNA polymerase major sigma-43 factor (sigma-A) [Bacillus subtilis] gi|133466|sp|P06224|R...
Match: gi|15613939|ref|NP_242242.1| score: 63.16 e-value: 3e-16 Identity: 41.89% Span: 222bp (32.9%) Frame: 3
gi|15613939|ref|NP_242242.1| RNA polymerase major sigma factor [Bacillus halodurans] gi|12643264|sp|O66381|RPSA_BACHD...
Match: gi|13812120|ref|NP_113247.1| score: 62 e-value: 1.8e-16 Identity: 43.84% Span: 219bp (32.4%) Frame: 3
gi|13812120|ref|NP_113247.1| RNA-polymerase sigma factor [Guillardia theta] gi|25288491|pir||D90084 RNA-polymerase si...
Match: gi|12697780|dbj|BAB21618.1| score: 60.85 e-value: 3.9e-16 Identity: 40.54% Span: 222bp (32.9%) Frame: 3
gi|12697780|dbj|BAB21618.1| PpSIG2 [Physcomitrella patens] gi|14669832|dbj|BAB62008.1| PpSIG2 [Physcomitrella patens]
Match: gi|28211633|ref|NP_782577.1| score: 45.82 e-value: 1.3e-17 Identity: 36.49% Span: 216bp (32.0%) Frame: 2
gi|28211633|ref|NP_782577.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28204075|gb|AAO36514.1| RNA...
Match: gi|20808174|ref|NP_623345.1| score: 45.82 e-value: 1e-17 Identity: 33.78% Span: 216bp (32.0%) Frame: 2
gi|20808174|ref|NP_623345.1| DNA-directed RNA polymerase sigma subunits (sigma70/sigma32) [Thermoanaerobacter tengcon...
Match: gi|12697780|dbj|BAB21618.1| score: 45.82 e-value: 3.9e-16 Identity: 34.58% Span: 306bp (45.3%) Frame: 2
gi|12697780|dbj|BAB21618.1| PpSIG2 [Physcomitrella patens] gi|14669832|dbj|BAB62008.1| PpSIG2 [Physcomitrella patens]
Match: gi|13812120|ref|NP_113247.1| score: 45.82 e-value: 1.8e-16 Identity: 33.33% Span: 222bp (32.9%) Frame: 2
gi|13812120|ref|NP_113247.1| RNA-polymerase sigma factor [Guillardia theta] gi|25288491|pir||D90084 RNA-polymerase si...
Match: gi|16079575|ref|NP_390399.1| score: 45.05 e-value: 1.4e-16 Identity: 33.78% Span: 216bp (32.0%) Frame: 2
gi|16079575|ref|NP_390399.1| RNA polymerase major sigma-43 factor (sigma-A) [Bacillus subtilis] gi|133466|sp|P06224|R...
Match: gi|1710683|sp|P52328|RSD2_LEPIN score: 44.28 e-value: 2.3e-16 Identity: 36.49% Span: 216bp (32.0%) Frame: 2
gi|1710683|sp|P52328|RSD2_LEPIN RNA polymerase sigma factor rpoD gi|149623|gb|AAA25264.1| RNA polymerase sigma-subunit
Match: gi|15613939|ref|NP_242242.1| score: 43.9 e-value: 3e-16 Identity: 31.08% Span: 216bp (32.0%) Frame: 2
gi|15613939|ref|NP_242242.1| RNA polymerase major sigma factor [Bacillus halodurans] gi|12643264|sp|O66381|RPSA_BACHD...
Match: gi|30022370|ref|NP_834001.1| score: 43.13 e-value: 5.1e-16 Identity: 32.43% Span: 216bp (32.0%) Frame: 2
gi|30022370|ref|NP_834001.1| RNA polymerase sigma factor rpoD [Bacillus cereus ATCC 14579] gi|29897928|gb|AAP11202.1|...
Match: gi|23022229|ref|ZP_00061848.1| score: 43.13 e-value: 1.3e-17 Identity: 35.14% Span: 216bp (32.0%) Frame: 2
gi|23022229|ref|ZP_00061848.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Clostridium the...
Match: gi|21402338|ref|NP_658323.1| score: 43.13 e-value: 5.1e-16 Identity: 32.43% Span: 216bp (32.0%) Frame: 2
gi|21402338|ref|NP_658323.1| sigma70, Sigma-70 factor [Bacillus anthracis A2012] gi|30264362|ref|NP_846739.1| RNA pol...
Match: gi|28210583|ref|NP_781527.1| score: 42.74 e-value: 3.8e-17 Identity: 28.71% Span: 297bp (44.0%) Frame: 2
gi|28210583|ref|NP_781527.1| RNA polymerase sigma factor rpoD [Clostridium tetani E88] gi|28203021|gb|AAO35464.1| RNA...
Match: gi|3062909|dbj|BAA25730.1| score: 42.74 e-value: 6.7e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|3062909|dbj|BAA25730.1| SigA [Bacillus sp.]
Match: gi|16272477|ref|NP_438691.1| score: 42.36 e-value: 2.2e-17 Identity: 31.08% Span: 216bp (32.0%) Frame: 2
gi|16272477|ref|NP_438691.1| RNA polymerase sigma-70 factor [Haemophilus influenzae Rd] gi|1173125|sp|P43766|RPSD_HAE...
Match: gi|16761985|ref|NP_457602.1| score: 40.82 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|16761985|ref|NP_457602.1| RNA polymerase sigma-70 factor [Salmonella enterica subsp. enterica serovar Typhi] gi|29...
Match: gi|37527834|ref|NP_931179.1| score: 40.82 e-value: 3.9e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|37527834|ref|NP_931179.1| RNA polymerase sigma factor rpoD (Sigma-70) [Photorhabdus luminescens subsp. laumondii T...
Match: gi|16766511|ref|NP_462126.1| score: 40.82 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|16766511|ref|NP_462126.1| sigma D (sigma 70) factor of RNA polymerase, major sigma factor during exponential growt...
Match: gi|22127411|ref|NP_670834.1| score: 40.82 e-value: 3.9e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|22127411|ref|NP_670834.1| RNA polymerase, sigma(70) factor [Yersinia pestis KIM] gi|21960500|gb|AAM87085.1| RNA po...
Match: gi|23428541|gb|AAL11450.1| score: 40.82 e-value: 8.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|23428541|gb|AAL11450.1| RNA polymerase sigma-70 subunit [Pantoea agglomerans]
Match: gi|1072030|gb|AAB60181.1| score: 40.82 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|1072030|gb|AAB60181.1| RNA polymerase sigma-subunit
Match: gi|1173127|sp|P43344|RPSD_SERMA score: 40.82 e-value: 5.2e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|1173127|sp|P43344|RPSD_SERMA RNA POLYMERASE SIGMA FACTOR RPOD (SIGMA-70)
Match: gi|16120968|ref|NP_404281.1| score: 40.82 e-value: 3.9e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|16120968|ref|NP_404281.1| RNA polymerase sigma factor RpoD [Yersinia pestis] gi|25288440|pir||AF0079 RNA polymeras...
Match: gi|133311|sp|P07336|RPSD_SALTY score: 40.82 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|133311|sp|P07336|RPSD_SALTY RNA polymerase sigma factor rpoD (Sigma-70) gi|66994|pir||RNEBST transcription initiat...
Match: gi|15803609|ref|NP_289642.1| score: 40.82 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|15803609|ref|NP_289642.1| RNA polymerase, sigma(70) factor; regulation of proteins induced at high temperatures [E...
Match: gi|26249652|ref|NP_755692.1| score: 40.82 e-value: 6.7e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|26249652|ref|NP_755692.1| RpoD protein [Escherichia coli CFT073] gi|26110080|gb|AAN82266.1| RpoD protein [Escheric...
Match: gi|1588486|prf||2208419B score: 40.43 e-value: 1.4e-16 Identity: 29.47% Span: 282bp (41.8%) Frame: 2
RNA polymerase sigma factor
Match: gi|33151868|ref|NP_873221.1| score: 40.43 e-value: 2.2e-17 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|33151868|ref|NP_873221.1| RNA polymerase sigma factor; sigma70 [Haemophilus ducreyi 35000HP] gi|33148089|gb|AAP956...
Match: gi|32030248|ref|ZP_00133133.1| score: 40.43 e-value: 6.3e-17 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|32030248|ref|ZP_00133133.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Haemophilus som...
Match: gi|26987129|ref|NP_742554.1| score: 40.43 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|26987129|ref|NP_742554.1| RNA polymerase sigma factor RpoD [Pseudomonas putida KT2440] gi|2654492|gb|AAB87749.1| D...
Match: gi|32034495|ref|ZP_00134667.1| score: 40.43 e-value: 2.2e-17 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|32034495|ref|ZP_00134667.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Actinobacillus ...
Match: gi|558881|gb|AAB41506.1| score: 40.43 e-value: 1.4e-16 Identity: 29.47% Span: 282bp (41.8%) Frame: 2
gi|558881|gb|AAB41506.1| SigA [Synechococcus sp. PCC 7002]
Match: gi|3646419|emb|CAA07705.1| score: 40.43 e-value: 6.6e-16 Identity: 29.73% Span: 216bp (32.0%) Frame: 2
gi|3646419|emb|CAA07705.1| sigma-70 factor [Pseudomonas tolaasii]
Match: gi|15603106|ref|NP_246178.1| score: 40.05 e-value: 1.1e-16 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|15603106|ref|NP_246178.1| RpoD [Pasteurella multocida] gi|12721597|gb|AAK03325.1| RpoD [Pasteurella multocida]
Match: gi|37522141|ref|NP_925518.1| score: 39.66 e-value: 5.1e-16 Identity: 29.47% Span: 282bp (41.8%) Frame: 2
gi|37522141|ref|NP_925518.1| principal RNA polymerase sigma factor [Gloeobacter violaceus] gi|35213141|dbj|BAC90513.1...
Match: gi|33519536|ref|NP_878368.1| score: 39.66 e-value: 1.4e-16 Identity: 31.08% Span: 216bp (32.0%) Frame: 2
gi|33519536|ref|NP_878368.1| RNA polymerase sigma-70 factor [Candidatus Blochmannia floridanus] gi|33517199|emb|CAD83...
Match: gi|16332132|ref|NP_442860.1| score: 39.66 e-value: 2.9e-17 Identity: 27.37% Span: 282bp (41.8%) Frame: 2
gi|16332132|ref|NP_442860.1| RNA polymerase sigma factor [Synechocystis sp. PCC 6803] gi|7434770|pir||S76760 transcri...
Match: gi|28897178|ref|NP_796783.1| score: 39.28 e-value: 5.1e-16 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|28897178|ref|NP_796783.1| RNA polymerase sigma factor RpoD [Vibrio parahaemolyticus RIMD 2210633] gi|28805387|dbj|...
Match: gi|37678745|ref|NP_933354.1| score: 39.28 e-value: 1.1e-15 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|37678745|ref|NP_933354.1| RNA polymerase sigma factor RpoD [Vibrio vulnificus YJ016] gi|37197486|dbj|BAC93325.1| R...
Match: gi|15616680|ref|NP_239892.1| score: 39.28 e-value: 6.6e-16 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|15616680|ref|NP_239892.1| RNA polymerase sigma factor RpoD [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi...
Match: gi|21672345|ref|NP_660412.1| score: 39.28 e-value: 6.6e-16 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|21672345|ref|NP_660412.1| RNA polymerase sigma factor RpoD [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|...
Match: gi|1710685|sp|P52322|RPSD_MICAE score: 38.89 e-value: 4.8e-17 Identity: 27.37% Span: 282bp (41.8%) Frame: 2
gi|1710685|sp|P52322|RPSD_MICAE RNA POLYMERASE SIGMA FACTOR RPOD1 gi|2117922|pir||JC4952 transcription initiation fac...
Match: gi|217140|dbj|BAA01749.1| score: 38.89 e-value: 8.7e-16 Identity: 28.42% Span: 282bp (41.8%) Frame: 2
gi|217140|dbj|BAA01749.1| principal sigma factor [Synechococcus sp.]
Match: gi|97628|pir||S24172 score: 38.89 e-value: 8.7e-16 Identity: 28.42% Span: 282bp (41.8%) Frame: 2
gi|97628|pir||S24172 transcription initiation factor sigma A - Synechococcus sp
Match: gi|5030433|gb|AAC44889.2| score: 38.51 e-value: 5.1e-16 Identity: 22.55% Span: 303bp (44.9%) Frame: 2
gi|5030433|gb|AAC44889.2| sigma 70-type sigma factor SigA [Thermotoga maritima]
Match: gi|15644200|ref|NP_229250.1| score: 38.51 e-value: 5.1e-16 Identity: 22.55% Span: 303bp (44.9%) Frame: 2
gi|15644200|ref|NP_229250.1| RNA polymerase sigma-A factor [Thermotoga maritima] gi|6831649|sp|P77994|RPSD_THEMA RNA ...
Match: gi|17232755|ref|NP_489303.1| score: 38.12 e-value: 6.3e-17 Identity: 28.42% Span: 282bp (41.8%) Frame: 2
RNA polymerase sigma factor RpoD [Nostoc sp. PCC 7120] >gi75907632|ref|YP_321928.1| RNA polymerase sigma factor RpoD ...
Match: gi|23128093|ref|ZP_00109949.1| score: 38.12 e-value: 6.3e-17 Identity: 28.42% Span: 282bp (41.8%) Frame: 2
gi|23128093|ref|ZP_00109949.1| hypothetical protein [Nostoc punctiforme] gi|8118663|gb|AAF73062.1| primary vegetative...
Match: gi|34499217|ref|NP_903432.1| score: 36.96 e-value: 1.1e-15 Identity: 28.38% Span: 216bp (32.0%) Frame: 2
gi|34499217|ref|NP_903432.1| RNA polymerase sigma factor RpoD [Chromobacterium violaceum ATCC 12472] gi|34105068|gb|A...
Match: gi|23041419|ref|ZP_00072877.1| score: 35.81 e-value: 8.7e-16 Identity: 27.37% Span: 282bp (41.8%) Frame: 2
gi|23041419|ref|ZP_00072877.1| COG0568: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Trichodesmium e...

374 lower scoring hits censored -- only 100 best hits are stored.
arabidopsis/peptide [blastx] Showing best 9 hits recorded
Match: At5g24120.1 score: 145.2 e-value: 3.6e-70 Identity: 64.42% Span: 312bp (46.2%) Frame: 2
At5g24120.1 68412.m02593 sigma-related factor (emb CAA77213.1)
Match: At5g24120.1 score: 137.9 e-value: 3.6e-70 Identity: 94.52% Span: 219bp (32.4%) Frame: 3
At5g24120.1 68412.m02593 sigma-related factor (emb CAA77213.1)
Match: At1g08540.1 score: 56.22 e-value: 4.5e-15 Identity: 40.54% Span: 222bp (32.9%) Frame: 3
At1g08540.1 68408.m00853 plastid RNA polymerase sigma-subunit -related similar to GB:BAA22427 and EST gb N65838
Match: At2g36990.1 score: 50.45 e-value: 8.7e-07 Identity: 41.94% Span: 186bp (27.6%) Frame: 3
At2g36990.1 68409.m04106 RNA polymerase sigma-70 factor -related
Match: At3g53920.1 score: 48.91 e-value: 2.5e-06 Identity: 35.14% Span: 222bp (32.9%) Frame: 3
At3g53920.1 68410.m05512 sigma factor SigC
Match: At1g08540.1 score: 41.97 e-value: 4.5e-15 Identity: 30.67% Span: 222bp (32.9%) Frame: 2
At1g08540.1 68408.m00853 plastid RNA polymerase sigma-subunit -related similar to GB:BAA22427 and EST gb N65838
Match: At5g13730.1 score: 39.66 e-value: 2.7e-08 Identity: 34.33% Span: 201bp (29.8%) Frame: 3
At5g13730.1 68412.m01474 sigma-related factor (gb|AAC97954.1)
Match: At1g64860.1 score: 36.19 e-value: 0.017 Identity: 42.59% Span: 162bp (24.0%) Frame: 3
At1g64860.1 68408.m06739 plastid RNA polymerase sigma-subunit identical to plastid RNA polymerase sigma-subunit GI:23...
Match: At5g13730.1 score: 35.42 e-value: 2.7e-08 Identity: 24.47% Span: 267bp (39.6%) Frame: 2
At5g13730.1 68412.m01474 sigma-related factor (gb|AAC97954.1)