| arabidopsis/peptide [blastx] | Showing best 0 hits recorded |
|
| genbank/nr [blastx] | Showing best 68 hits recorded |
| Match: gi|55733874|gb|AAV59381.1| |
score: 170.2 |
e-value: 3.9e-41 |
Identity: 85.57% |
Span: 291bp (44.4%) |
Frame: -1 |
| gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|50933005|ref|XP_476030.1| unk... |
| Match: gi|20334918|gb|AAM16215.1| |
score: 168.3 |
e-value: 1.5e-40 |
Identity: 84.69% |
Span: 294bp (44.9%) |
Frame: -1 |
| gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana] >gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Ar... |
| Match: gi|6686407|gb|AAF23841.1| |
score: 154.1 |
e-value: 2.9e-36 |
Identity: 82.98% |
Span: 282bp (43.1%) |
Frame: -1 |
| gi|6686407|gb|AAF23841.1| F1E22.8 [Arabidopsis thaliana] |
| Match: gi|66533783|ref|XP_624537.1| |
score: 136.3 |
e-value: 6.2e-31 |
Identity: 64.52% |
Span: 279bp (42.6%) |
Frame: -1 |
| PREDICTED: similar to CG2021-PA [Apis mellifera] |
| Match: gi|21288006|gb|EAA00327.1| |
score: 132.9 |
e-value: 6.9e-30 |
Identity: 65.59% |
Span: 279bp (42.6%) |
Frame: -1 |
| gi|21288006|gb|EAA00327.1| ENSANGP00000020162 [Anopheles gambiae str. PEST] >gi|31240533|ref|XP_320680.1| ENSANGP0000... |
| Match: gi|68358714|ref|XP_694374.1| |
score: 131 |
e-value: 2.6e-29 |
Identity: 63.04% |
Span: 276bp (42.1%) |
Frame: -1 |
| gi|68358714|ref|XP_694374.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8 [Danio rerio] |
| Match: gi|50728156|ref|XP_416009.1| |
score: 129.8 |
e-value: 5.8e-29 |
Identity: 63.04% |
Span: 276bp (42.1%) |
Frame: -1 |
| gi|50728156|ref|XP_416009.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8 [Gallus gallus] |
| Match: gi|24655606|ref|NP_647660.1| |
score: 128.3 |
e-value: 1.7e-28 |
Identity: 60.22% |
Span: 279bp (42.6%) |
Frame: -1 |
| gi|24655606|ref|NP_647660.1| CG2021-PA [Drosophila melanogaster] gi|7292155|gb|AAF47567.1| CG2021-PA [Drosophila mela... |
| Match: gi|73586551|gb|AAI02500.1| |
score: 128.3 |
e-value: 1.7e-28 |
Identity: 61.96% |
Span: 276bp (42.1%) |
Frame: -1 |
| gi|73586551|gb|AAI02500.1| MGC127377 protein [Bos taurus] >gi|77736425|ref|NP_001029912.1| hypothetical protein LOC61... |
| Match: gi|54641159|gb|EAL29909.1| |
score: 128.3 |
e-value: 1.7e-28 |
Identity: 60.22% |
Span: 279bp (42.6%) |
Frame: -1 |
| gi|54641159|gb|EAL29909.1| GA15189-PA [Drosophila pseudoobscura] |
| Match: gi|46329906|gb|AAH68881.1| |
score: 127.1 |
e-value: 3.8e-28 |
Identity: 61.96% |
Span: 276bp (42.1%) |
Frame: -1 |
| gi|46329906|gb|AAH68881.1| Unknown (protein for MGC:82379) [Xenopus laevis] |
| Match: gi|47210706|emb|CAF89998.1| |
score: 125.6 |
e-value: 1.1e-27 |
Identity: 60% |
Span: 276bp (42.1%) |
Frame: -1 |
| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|55629264|ref|XP_519332.1| |
score: 106.7 |
e-value: 5.3e-22 |
Identity: 44.35% |
Span: 372bp (56.8%) |
Frame: -1 |
| gi|55629264|ref|XP_519332.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8 [Pan troglodytes] |
| Match: gi|39584186|emb|CAE61561.1| |
score: 106.3 |
e-value: 6.9e-22 |
Identity: 50% |
Span: 270bp (41.2%) |
Frame: -1 |
| gi|39584186|emb|CAE61561.1| Hypothetical protein CBG05470 [Caenorhabditis briggsae] |
| Match: gi|73976399|ref|XP_866219.1| |
score: 106.3 |
e-value: 6.9e-22 |
Identity: 61.84% |
Span: 228bp (34.8%) |
Frame: -1 |
| gi|73976399|ref|XP_866219.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8 isoform 2 [Canis familiar... |
| Match: gi|15487631|gb|AAL00875.1| |
score: 105.5 |
e-value: 1.2e-21 |
Identity: 48.89% |
Span: 270bp (41.2%) |
Frame: -1 |
| gi|15487631|gb|AAL00875.1| Lsm sm-like protein protein 8 [Caenorhabditis elegans] >gi|17544148|ref|NP_500964.1| LSM S... |
| Match: gi|57222993|gb|AAW41037.1| |
score: 99.75 |
e-value: 6.4e-20 |
Identity: 54.02% |
Span: 261bp (39.8%) |
Frame: -1 |
| gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus neoformans var. neoforman... |
| Match: gi|23612724|ref|NP_704263.1| |
score: 98.6 |
e-value: 1.4e-19 |
Identity: 48.94% |
Span: 282bp (43.1%) |
Frame: -1 |
| gi|23612724|ref|NP_704263.1| u6 snRNA-associated sm-like protein, putative [Plasmodium falciparum 3D7] gi|23499002|em... |
| Match: gi|28279736|gb|AAH45532.1| |
score: 95.13 |
e-value: 1.6e-18 |
Identity: 66.67% |
Span: 189bp (28.9%) |
Frame: -1 |
| gi|28279736|gb|AAH45532.1| LSM8 protein [Homo sapiens] |
| Match: gi|3395591|emb|CAA20133.1| |
score: 93.97 |
e-value: 3.5e-18 |
Identity: 42.55% |
Span: 282bp (43.1%) |
Frame: -1 |
| gi|3395591|emb|CAA20133.1| SPCC1840.10 [Schizosaccharomyces pombe] >gi|19076009|ref|NP_588509.1| hypothetical protein... |
| Match: gi|68350391|gb|EAN31155.1| |
score: 88.97 |
e-value: 1.1e-16 |
Identity: 48.91% |
Span: 276bp (42.1%) |
Frame: -1 |
| gi|68350391|gb|EAN31155.1| U6 snRNA-associated Sm-like protein LSm8, putative [Theileria parva] >gi|71027589|ref|XP_7... |
| Match: gi|50546088|ref|XP_500571.1| |
score: 80.88 |
e-value: 3.1e-14 |
Identity: 43.68% |
Span: 261bp (39.8%) |
Frame: -1 |
| gi|50546088|ref|XP_500571.1| hypothetical protein [Yarrowia lipolytica] >gi|49646437|emb|CAG82802.1| unnamed protein ... |
| Match: gi|66850168|gb|EAL90495.1| |
score: 73.94 |
e-value: 3.8e-12 |
Identity: 37.63% |
Span: 270bp (41.2%) |
Frame: -1 |
| gi|66850168|gb|EAL90495.1| small nuclear ribonucleoprotein (LSM8), putative [Aspergillus fumigatus Af293] >gi|7099555... |
| Match: gi|70944071|ref|XP_742007.1| |
score: 72.02 |
e-value: 1.4e-11 |
Identity: 47.69% |
Span: 195bp (29.8%) |
Frame: -1 |
| gi|70944071|ref|XP_742007.1| u6 snRNA-associated sm-like protein, putative [Plasmodium chabaudi] >gi|56520743|emb|CAH... |
| Match: gi|66814660|ref|XP_641509.1| |
score: 68.55 |
e-value: 1.6e-10 |
Identity: 43.59% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|66814660|ref|XP_641509.1| hypothetical protein DDB0206318 [Dictyostelium discoideum] >gi|60469541|gb|EAL67532.1| h... |
| Match: gi|68478982|ref|XP_716425.1| |
score: 66.24 |
e-value: 7.9e-10 |
Identity: 37.08% |
Span: 252bp (38.5%) |
Frame: -1 |
| gi|68478982|ref|XP_716425.1| putative mRNA decapping complex component Lsm1 [Candida albicans SC5314] >gi|46438093|gb... |
| Match: gi|21537395|gb|AAM61736.1| |
score: 64.7 |
e-value: 2.3e-09 |
Identity: 39.77% |
Span: 264bp (40.3%) |
Frame: -1 |
| unknown [Arabidopsis thaliana] |
| Match: gi|20334848|gb|AAM16180.1| |
score: 64.31 |
e-value: 3e-09 |
Identity: 44.29% |
Span: 210bp (32.1%) |
Frame: -1 |
| gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana] >gi|15724180|gb|AAL06482.1| At1g19120/F14D16_26... |
| Match: gi|42545636|gb|EAA68479.1| |
score: 63.93 |
e-value: 3.9e-09 |
Identity: 33.72% |
Span: 249bp (38.0%) |
Frame: -1 |
| gi|42545636|gb|EAA68479.1| hypothetical protein FG00466.1 [Gibberella zeae PH-1] >gi|46107166|ref|XP_380642.1| hypoth... |
| Match: gi|2117304|emb|CAB09117.1| |
score: 63.16 |
e-value: 6.7e-09 |
Identity: 34.78% |
Span: 270bp (41.2%) |
Frame: -1 |
| gi|2117304|emb|CAB09117.1| SPBC3D6.08c [Schizosaccharomyces pombe] >gi|19112312|ref|NP_595520.1| small nuclear ribonu... |
| Match: gi|6322337|ref|NP_012411.1| |
score: 62.77 |
e-value: 8.7e-09 |
Identity: 41.25% |
Span: 237bp (36.2%) |
Frame: -1 |
| gi|6322337|ref|NP_012411.1| Like Sm protein; the finding that Lsm1 contains the Sm consensus motifs and most closely ... |
| Match: gi|65303249|emb|CAI75627.1| |
score: 62.77 |
e-value: 8.7e-09 |
Identity: 53.57% |
Span: 168bp (25.6%) |
Frame: -1 |
| gi|65303249|emb|CAI75627.1| U6 snRNA-associated Sm-like potein, putative [Theileria annulata] |
| Match: gi|21536995|gb|AAM61336.1| |
score: 62.39 |
e-value: 1.1e-08 |
Identity: 43.06% |
Span: 216bp (33.0%) |
Frame: -1 |
| gi|21536995|gb|AAM61336.1| Sm protein, putative [Arabidopsis thaliana] >gi|28393853|gb|AAO42334.1| putative Sm protei... |
| Match: gi|39945114|ref|XP_362094.1| |
score: 62.39 |
e-value: 1.1e-08 |
Identity: 37.36% |
Span: 261bp (39.8%) |
Frame: -1 |
| gi|39945114|ref|XP_362094.1| hypothetical protein MG04539.4 [Magnaporthe grisea 70-15] |
| Match: gi|44984196|gb|AAS53162.1| |
score: 62 |
e-value: 1.5e-08 |
Identity: 40% |
Span: 237bp (36.2%) |
Frame: -1 |
| gi|44984196|gb|AAS53162.1| AFL212Cp [Ashbya gossypii ATCC 10895] >gi|45198309|ref|NP_985338.1| AFL212Cp [Eremothecium... |
| Match: gi|71017769|ref|XP_759115.1| |
score: 61.23 |
e-value: 2.5e-08 |
Identity: 34% |
Span: 300bp (45.8%) |
Frame: -1 |
| gi|71017769|ref|XP_759115.1| hypothetical protein UM02968.1 [Ustilago maydis 521] >gi|46098907|gb|EAK84140.1| hypothe... |
| Match: gi|66529526|ref|XP_624639.1| |
score: 60.85 |
e-value: 3.3e-08 |
Identity: 33.33% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|66529526|ref|XP_624639.1| PREDICTED: similar to CG4279-PA [Apis mellifera] |
| Match: gi|49652903|emb|CAG85236.1| |
score: 60.85 |
e-value: 3.3e-08 |
Identity: 37.04% |
Span: 216bp (33.0%) |
Frame: -1 |
| gi|49652903|emb|CAG85236.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50413278|ref|XP_457238.1| unna... |
| Match: gi|50293209|ref|XP_449016.1| |
score: 60.08 |
e-value: 5.6e-08 |
Identity: 40% |
Span: 237bp (36.2%) |
Frame: -1 |
| gi|50293209|ref|XP_449016.1| unnamed protein product [Candida glabrata] >gi|49528329|emb|CAG61986.1| unnamed protein ... |
| Match: gi|50545209|ref|XP_500142.1| |
score: 59.69 |
e-value: 7.4e-08 |
Identity: 41.1% |
Span: 210bp (32.1%) |
Frame: -1 |
| gi|50545209|ref|XP_500142.1| hypothetical protein [Yarrowia lipolytica] >gi|49646007|emb|CAG84074.1| unnamed protein ... |
| Match: gi|24656769|ref|NP_611559.1| |
score: 59.69 |
e-value: 7.4e-08 |
Identity: 34.62% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|24656769|ref|NP_611559.1| CG4279-PA [Drosophila melanogaster] gi|7291257|gb|AAF46688.1| CG4279-PA [Drosophila mela... |
| Match: gi|66770685|gb|AAY54654.1| |
score: 59.69 |
e-value: 7.4e-08 |
Identity: 34.62% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster] |
| Match: gi|66853150|gb|EAL93474.1| |
score: 59.69 |
e-value: 7.4e-08 |
Identity: 33.77% |
Span: 231bp (35.3%) |
Frame: -1 |
| gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus fumigatus Af293] >gi|7100166... |
| Match: gi|46229842|gb|EAK90660.1| |
score: 59.69 |
e-value: 7.4e-08 |
Identity: 39.24% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|46229842|gb|EAK90660.1| similar to u6 snRNA-associated sm-like protein [Cryptosporidium parvum] |
| Match: gi|54637105|gb|EAL26508.1| |
score: 58.54 |
e-value: 1.6e-07 |
Identity: 33.33% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|54637105|gb|EAL26508.1| GA18077-PA [Drosophila pseudoobscura] |
| Match: gi|50309253|ref|XP_454633.1| |
score: 58.54 |
e-value: 1.6e-07 |
Identity: 40% |
Span: 237bp (36.2%) |
Frame: -1 |
| gi|50309253|ref|XP_454633.1| unnamed protein product [Kluyveromyces lactis] >gi|49643768|emb|CAG99720.1| unnamed prot... |
| Match: gi|49657517|emb|CAG90308.1| |
score: 58.15 |
e-value: 2.1e-07 |
Identity: 35.53% |
Span: 222bp (33.9%) |
Frame: -1 |
| gi|49657517|emb|CAG90308.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50426501|ref|XP_461847.1| unna... |
| Match: gi|67620455|ref|XP_667702.1| |
score: 57.77 |
e-value: 2.8e-07 |
Identity: 37.97% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|67620455|ref|XP_667702.1| u6 snRNA-associated sm-like protein [Cryptosporidium hominis] >gi|54658864|gb|EAL37475.1... |
| Match: gi|9294633|dbj|BAB02972.1| |
score: 57.38 |
e-value: 3.7e-07 |
Identity: 45.16% |
Span: 186bp (28.4%) |
Frame: -1 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|66805985|ref|XP_636714.1| |
score: 57.38 |
e-value: 3.7e-07 |
Identity: 49.02% |
Span: 153bp (23.4%) |
Frame: -1 |
| gi|66805985|ref|XP_636714.1| hypothetical protein DDB0219350 [Dictyostelium discoideum] >gi|60465111|gb|EAL63211.1| h... |
| Match: gi|55233669|gb|EAA00900.2| |
score: 56.61 |
e-value: 6.2e-07 |
Identity: 33.77% |
Span: 231bp (35.3%) |
Frame: -1 |
| gi|55233669|gb|EAA00900.2| ENSANGP00000012242 [Anopheles gambiae str. PEST] >gi|58395646|ref|XP_321407.2| ENSANGP0000... |
| Match: gi|7657313|ref|NP_055277.1| |
score: 56.22 |
e-value: 8.2e-07 |
Identity: 30.77% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|7657313|ref|NP_055277.1| Lsm1 protein [Homo sapiens] gi|20177943|sp|O15116|LSM1_HUMAN U6 snRNA-associated Sm-like ... |
| Match: gi|59857907|gb|AAX08788.1| |
score: 56.22 |
e-value: 8.2e-07 |
Identity: 30.77% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|59857907|gb|AAX08788.1| Lsm1 protein [Bos taurus] >gi|59857841|gb|AAX08755.1| Lsm1 protein [Bos taurus] >gi|629883... |
| Match: gi|18204794|gb|AAH21460.1| |
score: 56.22 |
e-value: 8.2e-07 |
Identity: 30.77% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|18204794|gb|AAH21460.1| Lsm1 protein [Mus musculus] >gi|26334347|dbj|BAC30891.1| unnamed protein product [Mus musc... |
| Match: gi|57525910|ref|NP_001003551.1| |
score: 56.22 |
e-value: 8.2e-07 |
Identity: 35.29% |
Span: 204bp (31.1%) |
Frame: -1 |
| gi|57525910|ref|NP_001003551.1| hypothetical protein LOC445157 [Danio rerio] >gi|50417210|gb|AAH78334.1| Zgc:101136 [... |
| Match: gi|73979315|ref|XP_532806.2| |
score: 56.22 |
e-value: 8.2e-07 |
Identity: 30.77% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|73979315|ref|XP_532806.2| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclea... |
| Match: gi|3876945|emb|CAA93263.1| |
score: 55.84 |
e-value: 1.1e-06 |
Identity: 32.53% |
Span: 249bp (38.0%) |
Frame: -1 |
| gi|3876945|emb|CAA93263.1| Hypothetical protein F40F8.9 [Caenorhabditis elegans] >gi|17533843|ref|NP_496385.1| LSM Sm... |
| Match: gi|58332084|ref|NP_001011191.1| |
score: 55.45 |
e-value: 1.4e-06 |
Identity: 33.33% |
Span: 216bp (33.0%) |
Frame: -1 |
| gi|58332084|ref|NP_001011191.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus tropicalis] >gi|56268999|gb|AA... |
| Match: gi|66356716|ref|XP_625536.1| |
score: 55.45 |
e-value: 1.4e-06 |
Identity: 37.66% |
Span: 231bp (35.3%) |
Frame: -1 |
| gi|66356716|ref|XP_625536.1| small nuclear ribonucleoprotein U6 [Cryptosporidium parvum] >gi|46226537|gb|EAK87525.1| ... |
| Match: gi|42551485|gb|EAA74328.1| |
score: 55.45 |
e-value: 1.4e-06 |
Identity: 31.4% |
Span: 228bp (34.8%) |
Frame: -1 |
| gi|42551485|gb|EAA74328.1| hypothetical protein FG10875.1 [Gibberella zeae PH-1] |
| Match: gi|39597338|emb|CAE59566.1| |
score: 55.07 |
e-value: 1.8e-06 |
Identity: 32.53% |
Span: 249bp (38.0%) |
Frame: -1 |
| gi|39597338|emb|CAE59566.1| Hypothetical protein CBG02963 [Caenorhabditis briggsae] |
| Match: gi|76779739|gb|AAI06458.1| |
score: 54.68 |
e-value: 2.4e-06 |
Identity: 29.49% |
Span: 234bp (35.7%) |
Frame: -1 |
| gi|76779739|gb|AAI06458.1| Unknown (protein for MGC:131170) [Xenopus laevis] |
| Match: gi|38089163|ref|XP_357867.1| |
score: 54.68 |
e-value: 2.4e-06 |
Identity: 31.94% |
Span: 216bp (33.0%) |
Frame: -1 |
| gi|38089163|ref|XP_357867.1| similar to Lsm1 protein [Mus musculus] |
| Match: gi|50924582|ref|XP_472650.1| |
score: 54.3 |
e-value: 3.1e-06 |
Identity: 40.58% |
Span: 207bp (31.6%) |
Frame: -1 |
| gi|50924582|ref|XP_472650.1| OSJNBa0027P08.15 [Oryza sativa (japonica cultivar-group)] >gi|38344547|emb|CAD40963.2| O... |
| Match: gi|57230241|gb|AAW46642.1| |
score: 54.3 |
e-value: 3.1e-06 |
Identity: 35.71% |
Span: 210bp (32.1%) |
Frame: -1 |
| gi|57230241|gb|AAW46642.1| RNA cap binding protein, putative [Cryptococcus neoformans var. neoformans JEC21] >gi|5025... |
| Match: gi|47209042|emb|CAF91744.1| |
score: 53.91 |
e-value: 4e-06 |
Identity: 35.29% |
Span: 204bp (31.1%) |
Frame: -1 |
| gi|47209042|emb|CAF91744.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|62662906|ref|XP_344537.2| |
score: 53.53 |
e-value: 5.3e-06 |
Identity: 30.56% |
Span: 216bp (33.0%) |
Frame: -1 |
| gi|62662906|ref|XP_344537.2| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1 (Small nuclear ribonuclea... |
| Match: gi|62083383|gb|AAX62416.1| |
score: 52.76 |
e-value: 9e-06 |
Identity: 37.14% |
Span: 210bp (32.1%) |
Frame: -1 |
| gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes] |
|
