| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4G30220.1 |
score: 135 |
e-value: 2e-32 |
Identity: 80.52% |
Span: 231bp (35.5%) |
Frame: 1 |
| Symbols: RUXF | small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative | chr4:1480... |
| Match: At2G43810.1 |
score: 66.2 |
e-value: 2e-11 |
Identity: 42.42% |
Span: 198bp (30.4%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At3G59810.1 |
score: 65.1 |
e-value: 3e-11 |
Identity: 42.03% |
Span: 207bp (31.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
|
| 2 lower scoring hits censored -- only 3 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|77552372|gb|ABA95169.1| |
score: 145 |
e-value: 1e-33 |
Identity: 89.61% |
Span: 231bp (35.5%) |
Frame: 1 |
| gi|77552372|gb|ABA95169.1| small nuclear ribonucleoprotein f, putative [Oryza sativa (japonica cultivar-group)] |
| Match: gi|50252055|dbj|BAD27986.1| |
score: 145 |
e-value: 1e-33 |
Identity: 89.61% |
Span: 231bp (35.5%) |
Frame: 1 |
| gi|50252055|dbj|BAD27986.1| putative small nuclear ribonucleoprotein polypeptide F [Oryza sativa (japonica cultivar-g... |
| Match: gi|77552373|gb|ABA95170.1| |
score: 142 |
e-value: 1e-32 |
Identity: 89.33% |
Span: 225bp (34.6%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|92873803|gb|ABE82177.1| |
score: 141 |
e-value: 2e-32 |
Identity: 84.42% |
Span: 231bp (35.5%) |
Frame: 1 |
| Like-Sm |
| Match: gi|15234669|ref|NP_194751.1| |
score: 135 |
e-value: 1e-30 |
Identity: 80.52% |
Span: 231bp (35.5%) |
Frame: 1 |
| RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F) [Arabidopsis thaliana] >gi10720264|sp|Q9SUM2.1|RUXF_ARATH RecName: Full=Prob... |
| Match: gi|47218337|emb|CAG04169.1| |
score: 133 |
e-value: 5e-30 |
Identity: 78.95% |
Span: 228bp (35.0%) |
Frame: 1 |
| gi|47218337|emb|CAG04169.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|74353864|gb|AAI02193.1| |
score: 132 |
e-value: 9e-30 |
Identity: 73.49% |
Span: 249bp (38.2%) |
Frame: 1 |
| gi|74353864|gb|AAI02193.1| Unknown (protein for IMAGE:7943169) [Bos taurus] |
| Match: gi|41946811|gb|AAH66015.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|41946811|gb|AAH66015.1| Unknown (protein for IMAGE:5715059) [Mus musculus] |
| Match: gi|55638675|ref|XP_509281.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|55638675|ref|XP_509281.1| PREDICTED: similar to SNRPF protein [Pan troglodytes] |
| Match: gi|4507131|ref|NP_003086.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|4507131|ref|NP_003086.1| small nuclear ribonucleoprotein polypeptide F [Homo sapiens] gi|6094209|sp|Q15356|RUXF_HU... |
| Match: gi|73978207|ref|XP_539726.2| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|73978207|ref|XP_539726.2| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|48145619|emb|CAG33032.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|48145619|emb|CAG33032.1| SNRPF [Homo sapiens] |
| Match: gi|83027678|ref|XP_897720.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|33876795|gb|AAH02505.2| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|33876795|gb|AAH02505.2| SNRPF protein [Homo sapiens] |
| Match: gi|94388852|ref|XP_919276.2| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|50728518|ref|XP_416157.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|50728518|ref|XP_416157.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|39645845|gb|AAH63397.1| |
score: 131 |
e-value: 2e-29 |
Identity: 79.73% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|39645845|gb|AAH63397.1| Unknown (protein for IMAGE:5176590) [Homo sapiens] |
| Match: gi|49619143|gb|AAT68156.1| |
score: 130 |
e-value: 3e-29 |
Identity: 78.38% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|49619143|gb|AAT68156.1| small nuclear ribonucleoprotein F [Danio rerio] >gi|51468014|ref|NP_001003881.1| small nuc... |
| Match: gi|110760095|ref|XP_001120305.1| |
score: 130 |
e-value: 3e-29 |
Identity: 80% |
Span: 225bp (34.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|74189295|dbj|BAE22683.1| |
score: 130 |
e-value: 4e-29 |
Identity: 78.38% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|74189295|dbj|BAE22683.1| unnamed protein product [Mus musculus] |
| Match: gi|94374072|ref|XP_992433.1| |
score: 129 |
e-value: 7e-29 |
Identity: 78.38% |
Span: 222bp (34.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|30177439|gb|EAA07677.2| |
score: 127 |
e-value: 5e-28 |
Identity: 75.34% |
Span: 219bp (33.6%) |
Frame: 1 |
| gi|30177439|gb|EAA07677.2| ENSANGP00000002801 [Anopheles gambiae str. PEST] >gi|31212897|ref|XP_312266.1| ENSANGP0000... |
| Match: gi|72168562|ref|XP_796806.1| |
score: 127 |
e-value: 4e-28 |
Identity: 73.68% |
Span: 228bp (35.0%) |
Frame: 1 |
| gi|72168562|ref|XP_796806.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|91083615|ref|XP_969779.1| |
score: 124 |
e-value: 2e-27 |
Identity: 79.17% |
Span: 216bp (33.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|495021|gb|AAA28445.1| |
score: 122 |
e-value: 2e-26 |
Identity: 72% |
Span: 225bp (34.6%) |
Frame: 1 |
| gi|495021|gb|AAA28445.1| membrane-associated protein |
| Match: gi|21430088|gb|AAM50722.1| |
score: 122 |
e-value: 2e-26 |
Identity: 72% |
Span: 225bp (34.6%) |
Frame: 1 |
| GM23968p |
| Match: gi|39589637|emb|CAE66872.1| |
score: 121 |
e-value: 3e-26 |
Identity: 77.03% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|39589637|emb|CAE66872.1| Hypothetical protein CBG12250 [Caenorhabditis briggsae] |
| Match: gi|95102986|gb|ABF51434.1| |
score: 121 |
e-value: 3e-26 |
Identity: 74.32% |
Span: 222bp (34.1%) |
Frame: 1 |
| small |
| Match: gi|42415804|gb|AAS15770.1| |
score: 121 |
e-value: 3e-26 |
Identity: 72.6% |
Span: 219bp (33.6%) |
Frame: 1 |
| gi|42415804|gb|AAS15770.1| DebB [Drosophila simulans] |
| Match: gi|289767|gb|AAA28212.1| |
score: 120 |
e-value: 3e-26 |
Identity: 77.33% |
Span: 225bp (34.6%) |
Frame: 1 |
| gi|289767|gb|AAA28212.1| Small nuclear ribonucleoprotein protein 5 [Caenorhabditis elegans] >gi|17557029|ref|NP_49870... |
| Match: gi|57226412|gb|AAW42872.1| |
score: 117 |
e-value: 4e-25 |
Identity: 73.97% |
Span: 219bp (33.6%) |
Frame: 1 |
| gi|57226412|gb|AAW42872.1| mRNA processing-related protein, putative [Cryptococcus neoformans var. neoformans JEC21] ... |
| Match: gi|3560134|emb|CAA20721.1| |
score: 115 |
e-value: 1e-24 |
Identity: 75.34% |
Span: 219bp (33.6%) |
Frame: 1 |
| gi|3560134|emb|CAA20721.1| SPBC4F6.01 [Schizosaccharomyces pombe] >gi|3130040|emb|CAA19017.1| SPBC3E7.14 [Schizosacch... |
| Match: gi|109471357|ref|XP_001073022.1| |
score: 111 |
e-value: 2e-23 |
Identity: 70.42% |
Span: 213bp (32.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|60691036|gb|AAX30542.1| |
score: 110 |
e-value: 6e-23 |
Identity: 72.06% |
Span: 204bp (31.3%) |
Frame: 1 |
| gi|60691036|gb|AAX30542.1| SJCHGC04779 protein [Schistosoma japonicum] |
| Match: gi|94398024|ref|XP_988577.1| |
score: 105 |
e-value: 2e-21 |
Identity: 67.57% |
Span: 222bp (34.1%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|71032523|ref|XP_765903.1| |
score: 105 |
e-value: 2e-21 |
Identity: 62.2% |
Span: 243bp (37.3%) |
Frame: 1 |
| small |
| Match: gi|88176407|gb|EAQ83875.1| |
score: 102 |
e-value: 1e-20 |
Identity: 64.86% |
Span: 219bp (33.6%) |
Frame: 1 |
| conserved |
| Match: gi|65305358|emb|CAI73683.1| |
score: 101 |
e-value: 2e-20 |
Identity: 60.49% |
Span: 240bp (36.9%) |
Frame: 1 |
| gi|65305358|emb|CAI73683.1| small nuclear ribonucleoprotein f, putative [Theileria annulata] |
| Match: gi|76618925|ref|XP_872090.1| |
score: 101 |
e-value: 3e-20 |
Identity: 56.18% |
Span: 249bp (38.2%) |
Frame: 1 |
| gi|76618925|ref|XP_872090.1| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|90305271|gb|EAS34902.1| |
score: 100 |
e-value: 4e-20 |
Identity: 62.16% |
Span: 219bp (33.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|66815943|ref|XP_641988.1| |
score: 99 |
e-value: 1e-19 |
Identity: 65.71% |
Span: 207bp (31.8%) |
Frame: 1 |
| gi|66815943|ref|XP_641988.1| hypothetical protein DDB0206218 [Dictyostelium discoideum] >gi|60470031|gb|EAL68012.1| h... |
| Match: gi|39943768|ref|XP_361421.1| |
score: 97.1 |
e-value: 5e-19 |
Identity: 61.33% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|39943768|ref|XP_361421.1| hypothetical protein MG03895.4 [Magnaporthe grisea 70-15] |
| Match: gi|89288130|gb|EAR86118.1| |
score: 97.1 |
e-value: 5e-19 |
Identity: 53.61% |
Span: 255bp (39.2%) |
Frame: 1 |
| Sm |
| Match: gi|67476154|ref|XP_653680.1| |
score: 95.1 |
e-value: 2e-18 |
Identity: 67.19% |
Span: 192bp (29.5%) |
Frame: 1 |
| gi|67476154|ref|XP_653680.1| small nuclear ribonucleoprotein F, putative [Entamoeba histolytica HM-1:IMSS] >gi|564706... |
| Match: gi|50543240|ref|XP_499786.1| |
score: 94 |
e-value: 4e-18 |
Identity: 64.29% |
Span: 207bp (31.8%) |
Frame: 1 |
| gi|50543240|ref|XP_499786.1| hypothetical protein [Yarrowia lipolytica] >gi|49645651|emb|CAG83711.1| unnamed protein ... |
| Match: gi|6325440|ref|NP_015508.1| |
score: 93.6 |
e-value: 6e-18 |
Identity: 63.64% |
Span: 228bp (35.0%) |
Frame: 1 |
| gi|6325440|ref|NP_015508.1| Sm or Sm-like snRNP protein; Smx3p [Saccharomyces cerevisiae] gi|1711405|sp|P54999|RUXF_Y... |
| Match: gi|27574149|pdb|1N9R|G |
score: 93.6 |
e-value: 6e-18 |
Identity: 63.64% |
Span: 228bp (35.0%) |
Frame: 1 |
| gi|27574149|pdb|1N9R|G Chain G, Crystal Structure Of A Heptameric Ring Complex Of Yeast Smf In Spacegroup P4122 >gi|2... |
| Match: gi|46108998|ref|XP_381557.1| |
score: 93.6 |
e-value: 6e-18 |
Identity: 57.33% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|46108998|ref|XP_381557.1| hypothetical protein FG01381.1 [Gibberella zeae PH-1] >gi|42546114|gb|EAA68957.1| hypoth... |
| Match: gi|7800974|emb|CAB91372.1| |
score: 90.1 |
e-value: 6e-17 |
Identity: 54.67% |
Span: 222bp (34.1%) |
Frame: 1 |
| gi|7800974|emb|CAB91372.1| related to snRNP protein SMX3 [Neurospora crassa] >gi|30580500|sp|Q9P5Z8|RUXF_NEUCR Probab... |
| Match: gi|27574163|pdb|1N9S|N |
score: 89.7 |
e-value: 8e-17 |
Identity: 62.34% |
Span: 228bp (35.0%) |
Frame: 1 |
| gi|27574163|pdb|1N9S|N Chain N, Crystal Structure Of Yeast Smf In Spacegroup P43212 >gi|27574162|pdb|1N9S|M Chain M, ... |
| Match: gi|50308333|ref|XP_454168.1| |
score: 89 |
e-value: 1e-16 |
Identity: 61.43% |
Span: 207bp (31.8%) |
Frame: 1 |
| gi|50308333|ref|XP_454168.1| unnamed protein product [Kluyveromyces lactis] >gi|49643303|emb|CAG99255.1| unnamed prot... |
| Match: gi|49526100|emb|CAG59719.1| |
score: 85.9 |
e-value: 1e-15 |
Identity: 55.71% |
Span: 207bp (31.8%) |
Frame: 1 |
| unnamed |
| Match: gi|23508471|ref|NP_701140.1| |
score: 85.9 |
e-value: 1e-15 |
Identity: 61.29% |
Span: 186bp (28.6%) |
Frame: 1 |
| gi|23508471|ref|NP_701140.1| small nuclear ribonucleoprotein F, putative [Plasmodium falciparum 3D7] gi|23496205|gb|A... |
| Match: gi|94389598|ref|XP_980896.1| |
score: 84.7 |
e-value: 3e-15 |
Identity: 77.55% |
Span: 147bp (22.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|62318628|dbj|BAD95080.1| |
score: 84 |
e-value: 5e-15 |
Identity: 76% |
Span: 150bp (23.0%) |
Frame: 1 |
| gi|62318628|dbj|BAD95080.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|70931673|ref|XP_737485.1| |
score: 83.6 |
e-value: 6e-15 |
Identity: 59.68% |
Span: 186bp (28.6%) |
Frame: 1 |
| gi|70931673|ref|XP_737485.1| small nuclear ribonucleoprotein F, putative [Plasmodium chabaudi] >gi|68068315|ref|XP_67... |
| Match: gi|49655404|emb|CAG87972.1| |
score: 82.4 |
e-value: 1e-14 |
Identity: 56.76% |
Span: 210bp (32.3%) |
Frame: 1 |
| gi|49655404|emb|CAG87972.1| unnamed protein product [Debaryomyces hansenii CBS767] >gi|50422347|ref|XP_459736.1| unna... |
| Match: gi|67901238|ref|XP_680875.1| |
score: 73.6 |
e-value: 6e-12 |
Identity: 55.56% |
Span: 186bp (28.6%) |
Frame: 1 |
| gi|67901238|ref|XP_680875.1| hypothetical protein AN7606.2 [Aspergillus nidulans FGSC A4] >gi|40742996|gb|EAA62186.1|... |
| Match: gi|44983228|gb|AAS52410.1| |
score: 73.6 |
e-value: 6e-12 |
Identity: 48.57% |
Span: 207bp (31.8%) |
Frame: 1 |
| gi|44983228|gb|AAS52410.1| AEL274Cp [Ashbya gossypii ATCC 10895] >gi|45190332|ref|NP_984586.1| AEL274Cp [Eremothecium... |
| Match: gi|50746299|ref|XP_420431.1| |
score: 71.6 |
e-value: 2e-11 |
Identity: 42.31% |
Span: 234bp (35.9%) |
Frame: 1 |
| gi|50746299|ref|XP_420431.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Gallus ga... |
| Match: gi|71649985|ref|XP_813700.1| |
score: 69.7 |
e-value: 9e-11 |
Identity: 54.29% |
Span: 210bp (32.3%) |
Frame: 1 |
| small |
| Match: gi|70906031|gb|AAZ14670.1| |
score: 68.9 |
e-value: 2e-10 |
Identity: 53.73% |
Span: 201bp (30.9%) |
Frame: 1 |
| gi|70906031|gb|AAZ14670.1| sm-f snRNP core complex protein, putative [Leishmania major strain Friedlin] >gi|72549482|... |
| Match: gi|14916400|gb|AAK73913.1| |
score: 68.9 |
e-value: 2e-10 |
Identity: 46.27% |
Span: 201bp (30.9%) |
Frame: 1 |
| gi|14916400|gb|AAK73913.1| Lsm sm-like protein protein 6 [Caenorhabditis elegans] >gi|17510579|ref|NP_490883.1| LSM S... |
| Match: gi|39589389|emb|CAE74418.1| |
score: 68.9 |
e-value: 2e-10 |
Identity: 46.27% |
Span: 201bp (30.9%) |
Frame: 1 |
| gi|39589389|emb|CAE74418.1| Hypothetical protein CBG22150 [Caenorhabditis briggsae] |
| Match: gi|71002408|ref|XP_755885.1| |
score: 68.2 |
e-value: 3e-10 |
Identity: 48% |
Span: 198bp (30.4%) |
Frame: 1 |
| small |
| Match: gi|13812032|ref|NP_113163.1| |
score: 67.8 |
e-value: 3e-10 |
Identity: 47.06% |
Span: 204bp (31.3%) |
Frame: 1 |
| gi|13812032|ref|NP_113163.1| small nuclear ribonucleoprotein F [Guillardia theta] gi|25329696|pir||C90130 small nucle... |
| Match: gi|60687576|gb|AAX30121.1| |
score: 67.4 |
e-value: 4e-10 |
Identity: 45.45% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|60687576|gb|AAX30121.1| putative U6-snRNA-associated protein [Schistosoma japonicum] |
| Match: gi|90301923|gb|EAS31554.1| |
score: 66.6 |
e-value: 8e-10 |
Identity: 46.27% |
Span: 201bp (30.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|15224366|ref|NP_181909.1| |
score: 66.2 |
e-value: 1e-09 |
Identity: 42.42% |
Span: 198bp (30.4%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|73978282|ref|XP_855162.1| |
score: 66.2 |
e-value: 1e-09 |
Identity: 40.26% |
Span: 231bp (35.5%) |
Frame: 1 |
| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Canis familiaris] |
| Match: gi|5832405|emb|CAB54975.1| |
score: 66.2 |
e-value: 1e-09 |
Identity: 44.78% |
Span: 201bp (30.9%) |
Frame: 1 |
| gi|5832405|emb|CAB54975.1| SPAC2F3.17c [Schizosaccharomyces pombe] >gi|19115292|ref|NP_594380.1| hypothetical protein... |
| Match: gi|5901998|ref|NP_009011.1| |
score: 65.9 |
e-value: 1e-09 |
Identity: 43.94% |
Span: 198bp (30.4%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein LSm6 [Homo sapiens] >gi113865835|ref|NP_084421.1| U6 snRNA-associated Sm-like pro... |
| Match: gi|11602707|emb|CAC18540.1| |
score: 65.9 |
e-value: 1e-09 |
Identity: 43.94% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|11602707|emb|CAC18540.1| putative U6-snRNA-associated protein [Echinococcus multilocularis] |
| Match: gi|50908869|ref|XP_465923.1| |
score: 65.5 |
e-value: 2e-09 |
Identity: 42.42% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|50908869|ref|XP_465923.1| putative Sm protein F [Oryza sativa (japonica cultivar-group)] >gi|48716974|dbj|BAD23667... |
| Match: gi|71745372|ref|XP_827316.1| |
score: 65.5 |
e-value: 2e-09 |
Identity: 52.86% |
Span: 210bp (32.3%) |
Frame: 1 |
| small |
| Match: gi|66362830|ref|XP_628381.1| |
score: 65.1 |
e-value: 2e-09 |
Identity: 42.25% |
Span: 213bp (32.7%) |
Frame: 1 |
| small |
| Match: gi|15232179|ref|NP_191540.1| |
score: 65.1 |
e-value: 2e-09 |
Identity: 42.03% |
Span: 207bp (31.8%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|21554327|gb|AAM63434.1| |
score: 65.1 |
e-value: 2e-09 |
Identity: 42.03% |
Span: 207bp (31.8%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] |
| Match: gi|67624411|ref|XP_668488.1| |
score: 65.1 |
e-value: 2e-09 |
Identity: 42.25% |
Span: 213bp (32.7%) |
Frame: 1 |
| gi|67624411|ref|XP_668488.1| Sm protein F [Cryptosporidium hominis] >gi|54659686|gb|EAL38252.1| Sm protein F [Cryptos... |
| Match: gi|72032500|ref|XP_799246.1| |
score: 64.7 |
e-value: 3e-09 |
Identity: 43.94% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|72032500|ref|XP_799246.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Strongylocentrotus purpu... |
| Match: gi|47217355|emb|CAG11060.1| |
score: 64.3 |
e-value: 4e-09 |
Identity: 40.91% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|47217355|emb|CAG11060.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|55238130|gb|EAA11294.2| |
score: 64.3 |
e-value: 4e-09 |
Identity: 44.44% |
Span: 189bp (29.0%) |
Frame: 1 |
| gi|55238130|gb|EAA11294.2| ENSANGP00000021121 [Anopheles gambiae str. PEST] >gi|58387098|ref|XP_315329.2| ENSANGP0000... |
| Match: gi|70991347|ref|XP_750522.1| |
score: 63.9 |
e-value: 5e-09 |
Identity: 50.77% |
Span: 195bp (30.0%) |
Frame: 1 |
| U6 |
| Match: gi|48735113|gb|AAH72549.1| |
score: 63.9 |
e-value: 5e-09 |
Identity: 40.91% |
Span: 198bp (30.4%) |
Frame: 1 |
| gi|48735113|gb|AAH72549.1| Unknown (protein for MGC:92379) [Danio rerio] |
| Match: gi|71033743|ref|XP_766513.1| |
score: 63.9 |
e-value: 5e-09 |
Identity: 45.71% |
Span: 210bp (32.3%) |
Frame: 1 |
| U6 |
| Match: gi|38048229|gb|AAR10017.1| |
score: 62.8 |
e-value: 1e-08 |
Identity: 44.44% |
Span: 189bp (29.0%) |
Frame: 1 |
| similar |
| Match: gi|57230795|gb|AAW47104.1| |
score: 62.4 |
e-value: 1e-08 |
Identity: 37.35% |
Span: 249bp (38.2%) |
Frame: 1 |
| gi|57230795|gb|AAW47104.1| u6 snRNA-associated sm-like protein lsm6, putative [Cryptococcus neoformans var. neoforman... |
| Match: gi|89299175|gb|EAR97163.1| |
score: 62 |
e-value: 2e-08 |
Identity: 46.58% |
Span: 219bp (33.6%) |
Frame: 1 |
| Sm |
| Match: gi|110749924|ref|XP_001121733.1| |
score: 62 |
e-value: 2e-08 |
Identity: 42.86% |
Span: 189bp (29.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|88183321|gb|EAQ90789.1| |
score: 61.2 |
e-value: 3e-08 |
Identity: 46.03% |
Span: 189bp (29.0%) |
Frame: 1 |
| conserved |
| Match: gi|46107150|ref|XP_380634.1| |
score: 61.2 |
e-value: 3e-08 |
Identity: 44.62% |
Span: 195bp (30.0%) |
Frame: 1 |
| gi|46107150|ref|XP_380634.1| hypothetical protein FG00458.1 [Gibberella zeae PH-1] >gi|42545628|gb|EAA68471.1| hypoth... |
| Match: gi|91082305|ref|XP_974175.1| |
score: 60.5 |
e-value: 5e-08 |
Identity: 41.27% |
Span: 189bp (29.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|23615407|emb|CAD52398.1| |
score: 60.5 |
e-value: 5e-08 |
Identity: 40% |
Span: 210bp (32.3%) |
Frame: 1 |
| u6 |
| Match: gi|19074156|ref|NP_584762.1| |
score: 60.1 |
e-value: 7e-08 |
Identity: 45.31% |
Span: 192bp (29.5%) |
Frame: 1 |
| gi|19074156|ref|NP_584762.1| SMALL NUCLEAR RIBONUCLEOPROTEIN F [Encephalitozoon cuniculi] gi|19068798|emb|CAD25266.1|... |
| Match: gi|109508614|ref|XP_001070778.1| |
score: 59.7 |
e-value: 9e-08 |
Identity: 42.19% |
Span: 192bp (29.5%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|55623294|ref|XP_517469.1| |
score: 59.3 |
e-value: 1e-07 |
Identity: 41.94% |
Span: 186bp (28.6%) |
Frame: 1 |
| gi|55623294|ref|XP_517469.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 (Sm protein F) [Pan trogl... |
| Match: gi|70951963|ref|XP_745182.1| |
score: 58.9 |
e-value: 2e-07 |
Identity: 41.43% |
Span: 210bp (32.3%) |
Frame: 1 |
| gi|70951963|ref|XP_745182.1| u6 snRNA-associated sm-like protein, putative [Plasmodium chabaudi] >gi|56525424|emb|CAH... |
| Match: gi|67624211|ref|XP_668388.1| |
score: 58.5 |
e-value: 2e-07 |
Identity: 54.35% |
Span: 138bp (21.2%) |
Frame: 1 |
| gi|67624211|ref|XP_668388.1| hypothetical protein Chro.10304 [Cryptosporidium hominis] >gi|54659578|gb|EAL38148.1| hy... |
| Match: gi|68074967|ref|XP_679400.1| |
score: 58.2 |
e-value: 3e-07 |
Identity: 40% |
Span: 210bp (32.3%) |
Frame: 1 |
| gi|68074967|ref|XP_679400.1| u6 snRNA-associated sm-like protein, putative [Plasmodium berghei] >gi|56500140|emb|CAH9... |
| Match: gi|71004746|ref|XP_757039.1| |
score: 57.8 |
e-value: 4e-07 |
Identity: 40% |
Span: 195bp (30.0%) |
Frame: 1 |
| hypothetical |
|
| 94 lower scoring hits censored -- only 100 best hits are stored. |
