| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270243122|emb|CBI30062.1| |
score: 355 |
e-value: 3e-96 |
Identity: 85.45% |
Span: 639bp (99.8%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225441355|ref|XP_002276914.1| |
score: 355 |
e-value: 3e-96 |
Identity: 85.45% |
Span: 639bp (99.8%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|147819065|emb|CAN64891.1| |
score: 355 |
e-value: 3e-96 |
Identity: 85.45% |
Span: 639bp (99.8%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|224090045|ref|XP_002308919.1| |
score: 338 |
e-value: 2e-91 |
Identity: 80.28% |
Span: 639bp (99.8%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222854895|gb|EEE92442.1| predicted protein [Populus trichocarpa] |
| Match: gi|255578471|ref|XP_002530100.1| |
score: 332 |
e-value: 2e-89 |
Identity: 78.5% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus communis] >gi223530411|gb|EEF32299.1| U4/U6 small nucle... |
| Match: gi|242040915|ref|XP_002467852.1| |
score: 305 |
e-value: 2e-81 |
Identity: 71.83% |
Span: 639bp (99.8%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_01g035220 [Sorghum bicolor] >gi241921706|gb|EER94850.1| hypothetical protein SORBIDRA... |
| Match: gi|30794128|gb|AAP40506.1| |
score: 302 |
e-value: 2e-80 |
Identity: 70.09% |
Span: 639bp (99.8%) |
Frame: 3 |
| putative small nuclear ribonucleoprotein Prp4p [Arabidopsis thaliana] >gi110738927|dbj|BAF01385.1| putative U4/U6 sma... |
| Match: gi|15227373|ref|NP_181681.1| |
score: 302 |
e-value: 2e-80 |
Identity: 70.09% |
Span: 639bp (99.8%) |
Frame: 3 |
| EMB2776; nucleotide binding [Arabidopsis thaliana] >gi3123130|sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclea... |
| Match: gi|226528469|ref|NP_001146287.1| |
score: 301 |
e-value: 4e-80 |
Identity: 70.42% |
Span: 639bp (99.8%) |
Frame: 3 |
| hypothetical protein LOC100279862 [Zea mays] >gi219886513|gb|ACL53631.1| unknown [Zea mays] |
| Match: gi|115453063|ref|NP_001050132.1| |
score: 295 |
e-value: 3e-78 |
Identity: 71.36% |
Span: 639bp (99.8%) |
Frame: 3 |
| Os03g0355200 [Oryza sativa (japonica cultivar-group)] >gi108708208|gb|ABF96003.1| U4/U6 small nuclear ribonucleoprote... |
| Match: gi|125586281|gb|EAZ26945.1| |
score: 295 |
e-value: 3e-78 |
Identity: 71.36% |
Span: 639bp (99.8%) |
Frame: 3 |
| hypothetical protein OsJ_10872 [Oryza sativa Japonica Group] >gi218192844|gb|EEC75271.1| hypothetical protein OsI_116... |
| Match: gi|168010281|ref|XP_001757833.1| |
score: 257 |
e-value: 7e-67 |
Identity: 63.51% |
Span: 639bp (99.8%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691109|gb|EDQ77473.1| predicted protein [Physcomitrella... |
| Match: gi|156390600|ref|XP_001635358.1| |
score: 192 |
e-value: 2e-47 |
Identity: 46.4% |
Span: 639bp (99.8%) |
Frame: 3 |
| predicted protein [Nematostella vectensis] >gi156222451|gb|EDO43295.1| predicted protein [Nematostella vectensis] |
| Match: gi|224090045|ref|XP_002308919.1| |
score: 97.4 |
e-value: 9e-19 |
Identity: 27.95% |
Span: 477bp (74.5%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222854895|gb|EEE92442.1| predicted protein [Populus trichocarpa] |
| Match: gi|226528469|ref|NP_001146287.1| |
score: 97.4 |
e-value: 9e-19 |
Identity: 30.43% |
Span: 477bp (74.5%) |
Frame: 3 |
| hypothetical protein LOC100279862 [Zea mays] >gi219886513|gb|ACL53631.1| unknown [Zea mays] |
| Match: gi|168010281|ref|XP_001757833.1| |
score: 96.7 |
e-value: 2e-18 |
Identity: 29.94% |
Span: 465bp (72.7%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162691109|gb|EDQ77473.1| predicted protein [Physcomitrella... |
| Match: gi|225441355|ref|XP_002276914.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 28.03% |
Span: 465bp (72.7%) |
Frame: 3 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|270243122|emb|CBI30062.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 28.03% |
Span: 465bp (72.7%) |
Frame: 3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|147819065|emb|CAN64891.1| |
score: 95.1 |
e-value: 5e-18 |
Identity: 28.03% |
Span: 465bp (72.7%) |
Frame: 3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|255578471|ref|XP_002530100.1| |
score: 92.4 |
e-value: 3e-17 |
Identity: 28.66% |
Span: 465bp (72.7%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus communis] >gi223530411|gb|EEF32299.1| U4/U6 small nucle... |
| Match: gi|242040915|ref|XP_002467852.1| |
score: 90.1 |
e-value: 2e-16 |
Identity: 28.57% |
Span: 477bp (74.5%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_01g035220 [Sorghum bicolor] >gi241921706|gb|EER94850.1| hypothetical protein SORBIDRA... |
| Match: gi|125586281|gb|EAZ26945.1| |
score: 88.2 |
e-value: 6e-16 |
Identity: 27.95% |
Span: 477bp (74.5%) |
Frame: 3 |
| hypothetical protein OsJ_10872 [Oryza sativa Japonica Group] >gi218192844|gb|EEC75271.1| hypothetical protein OsI_116... |
| Match: gi|115453063|ref|NP_001050132.1| |
score: 88.2 |
e-value: 6e-16 |
Identity: 27.95% |
Span: 477bp (74.5%) |
Frame: 3 |
| Os03g0355200 [Oryza sativa (japonica cultivar-group)] >gi108708208|gb|ABF96003.1| U4/U6 small nuclear ribonucleoprote... |
| Match: gi|15227373|ref|NP_181681.1| |
score: 81.6 |
e-value: 5e-14 |
Identity: 24.86% |
Span: 513bp (80.2%) |
Frame: 3 |
| EMB2776; nucleotide binding [Arabidopsis thaliana] >gi3123130|sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclea... |
| Match: gi|30794128|gb|AAP40506.1| |
score: 81.3 |
e-value: 7e-14 |
Identity: 24.86% |
Span: 513bp (80.2%) |
Frame: 3 |
| putative small nuclear ribonucleoprotein Prp4p [Arabidopsis thaliana] >gi110738927|dbj|BAF01385.1| putative U4/U6 sma... |
|
| 917 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At2G41500.1 |
score: 302 |
e-value: 1e-82 |
Identity: 70.09% |
Span: 639bp (99.8%) |
Frame: 3 |
| WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17311397-17313933 REVERSE |
| Match: At2G05720.1 |
score: 157 |
e-value: 5e-39 |
Identity: 43.4% |
Span: 630bp (98.4%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr2:2147189-2148212 FORWARD |
| Match: At5G25150.1 |
score: 109 |
e-value: 1e-24 |
Identity: 34.18% |
Span: 471bp (73.6%) |
Frame: 3 |
| nucleotide binding | chr5:8677120-8682061 FORWARD |
| Match: At3G49660.1 |
score: 107 |
e-value: 8e-24 |
Identity: 34.76% |
Span: 474bp (74.1%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr3:18424675-18426208 FORWARD |
| Match: At5G25150.1 |
score: 103 |
e-value: 7e-23 |
Identity: 33.74% |
Span: 486bp (75.9%) |
Frame: 3 |
| nucleotide binding | chr5:8677120-8682061 FORWARD |
| Match: At4G02730.1 |
score: 97.4 |
e-value: 6e-21 |
Identity: 30.46% |
Span: 447bp (69.8%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr4:1207759-1209066 FORWARD |
| Match: At5G16750.1 |
score: 95.9 |
e-value: 2e-20 |
Identity: 32.47% |
Span: 459bp (71.7%) |
Frame: 3 |
| Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding | chr5:5504544-5509269 REVERSE |
| Match: At5G67320.1 |
score: 92 |
e-value: 3e-19 |
Identity: 32.47% |
Span: 432bp (67.5%) |
Frame: 3 |
| WD-40 repeat family protein | chr5:26874494-26878200 FORWARD |
| Match: At2G33340.2 |
score: 89.4 |
e-value: 2e-18 |
Identity: 31.45% |
Span: 453bp (70.8%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr2:14133540-14138076 REVERSE |
| Match: At2G33340.3 |
score: 89.4 |
e-value: 2e-18 |
Identity: 31.45% |
Span: 453bp (70.8%) |
Frame: 3 |
| nucleotide binding | chr2:14133779-14138076 REVERSE |
| Match: At2G33340.1 |
score: 89.4 |
e-value: 2e-18 |
Identity: 31.45% |
Span: 453bp (70.8%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr2:14133540-14138076 REVERSE |
| Match: At1G61210.1 |
score: 87.8 |
e-value: 5e-18 |
Identity: 30.6% |
Span: 399bp (62.3%) |
Frame: 3 |
| WD-40 repeat family protein / katanin p80 subunit, putative | chr1:22568450-22575220 FORWARD |
| Match: At5G08390.1 |
score: 87.8 |
e-value: 5e-18 |
Identity: 27.75% |
Span: 516bp (80.6%) |
Frame: 3 |
| similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G23430.1); simila... |
| Match: At4G02730.1 |
score: 85.5 |
e-value: 2e-17 |
Identity: 35.71% |
Span: 372bp (58.1%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr4:1207759-1209066 FORWARD |
| Match: At5G67320.1 |
score: 83.2 |
e-value: 1e-16 |
Identity: 29.41% |
Span: 429bp (67.0%) |
Frame: 3 |
| WD-40 repeat family protein | chr5:26874494-26878200 FORWARD |
| Match: At5G08390.1 |
score: 82.4 |
e-value: 2e-16 |
Identity: 24.76% |
Span: 624bp (97.5%) |
Frame: 3 |
| similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G23430.1); simila... |
| Match: At2G41500.1 |
score: 81.6 |
e-value: 3e-16 |
Identity: 24.86% |
Span: 513bp (80.2%) |
Frame: 3 |
| WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related | chr2:17311397-17313933 REVERSE |
| Match: At5G25150.1 |
score: 81.3 |
e-value: 5e-16 |
Identity: 26.7% |
Span: 453bp (70.8%) |
Frame: 3 |
| nucleotide binding | chr5:8677120-8682061 FORWARD |
| Match: At3G49660.1 |
score: 80.1 |
e-value: 1e-15 |
Identity: 32.03% |
Span: 366bp (57.2%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr3:18424675-18426208 FORWARD |
| Match: At3G49660.1 |
score: 77.8 |
e-value: 5e-15 |
Identity: 30.77% |
Span: 453bp (70.8%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr3:18424675-18426208 FORWARD |
| Match: At5G16750.1 |
score: 77 |
e-value: 9e-15 |
Identity: 31.51% |
Span: 432bp (67.5%) |
Frame: 3 |
| Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding | chr5:5504544-5509269 REVERSE |
| Match: At5G16750.1 |
score: 75.9 |
e-value: 2e-14 |
Identity: 29.88% |
Span: 471bp (73.6%) |
Frame: 3 |
| Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding | chr5:5504544-5509269 REVERSE |
| Match: At5G08390.1 |
score: 74.7 |
e-value: 4e-14 |
Identity: 29.58% |
Span: 423bp (66.1%) |
Frame: 3 |
| similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G23430.1); simila... |
| Match: At3G49660.1 |
score: 73.6 |
e-value: 9e-14 |
Identity: 25.15% |
Span: 483bp (75.5%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr3:18424675-18426208 FORWARD |
| Match: At4G02730.1 |
score: 70.1 |
e-value: 1e-12 |
Identity: 29.75% |
Span: 453bp (70.8%) |
Frame: 3 |
| transducin family protein / WD-40 repeat family protein | chr4:1207759-1209066 FORWARD |
|
| 45 lower scoring hits censored -- only 25 best hits are stored. |
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: O22212 |
score: 302 |
e-value: 1e-81 |
Identity: 70.09% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1 |
| Match: Q9DAW6 |
score: 182 |
e-value: 2e-45 |
Identity: 43.69% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1 |
| Match: Q3MHE2 |
score: 182 |
e-value: 1e-45 |
Identity: 43.69% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1 |
| Match: O43172 |
score: 182 |
e-value: 2e-45 |
Identity: 43.69% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2 |
| Match: Q5NVD0 |
score: 182 |
e-value: 2e-45 |
Identity: 43.69% |
Span: 639bp (99.8%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1 |
| Match: Q9UTC7 |
score: 160 |
e-value: 5e-39 |
Identity: 40.36% |
Span: 639bp (99.8%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1 |
| Match: O13282 |
score: 126 |
e-value: 1e-28 |
Identity: 39.87% |
Span: 471bp (73.6%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1 |
| Match: P20053 |
score: 124 |
e-value: 6e-28 |
Identity: 35% |
Span: 636bp (99.4%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces cerevisiae GN=PRP4 PE=1 SV=1 |
| Match: O74319 |
score: 120 |
e-value: 9e-27 |
Identity: 38.65% |
Span: 486bp (75.9%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1 |
| Match: Q8YV57 |
score: 119 |
e-value: 1e-26 |
Identity: 39.62% |
Span: 474bp (74.1%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1 |
| Match: Q8YV57 |
score: 114 |
e-value: 7e-25 |
Identity: 35.85% |
Span: 474bp (74.1%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1 |
| Match: Q8YV57 |
score: 112 |
e-value: 2e-24 |
Identity: 36.31% |
Span: 468bp (73.1%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1 |
| Match: Q8YV57 |
score: 109 |
e-value: 2e-23 |
Identity: 39.07% |
Span: 453bp (70.8%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1 |
| Match: Q8YV57 |
score: 108 |
e-value: 4e-23 |
Identity: 33.97% |
Span: 465bp (72.7%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein all2124 OS=Anabaena sp. (strain PCC 7120) GN=all2124 PE=4 SV=1 |
| Match: O74319 |
score: 89.4 |
e-value: 2e-17 |
Identity: 31.36% |
Span: 501bp (78.3%) |
Frame: 3 |
| Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1 |
| Match: Q3MHE2 |
score: 83.6 |
e-value: 1e-15 |
Identity: 26.11% |
Span: 465bp (72.7%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1 |
| Match: O43172 |
score: 83.6 |
e-value: 1e-15 |
Identity: 26.11% |
Span: 465bp (72.7%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2 |
| Match: Q5NVD0 |
score: 83.6 |
e-value: 1e-15 |
Identity: 26.11% |
Span: 465bp (72.7%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1 |
| Match: Q9DAW6 |
score: 83.2 |
e-value: 1e-15 |
Identity: 26.11% |
Span: 465bp (72.7%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1 |
| Match: O22212 |
score: 81.6 |
e-value: 4e-15 |
Identity: 24.86% |
Span: 513bp (80.2%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1 |
| Match: Q5NVD0 |
score: 72 |
e-value: 3e-12 |
Identity: 32.2% |
Span: 348bp (54.4%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1 |
| Match: Q3MHE2 |
score: 72 |
e-value: 3e-12 |
Identity: 32.2% |
Span: 348bp (54.4%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1 |
| Match: O43172 |
score: 72 |
e-value: 3e-12 |
Identity: 32.2% |
Span: 348bp (54.4%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2 |
| Match: Q9DAW6 |
score: 70.1 |
e-value: 1e-11 |
Identity: 31.36% |
Span: 348bp (54.4%) |
Frame: 3 |
| U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=2 SV=1 |
| Match: Q9UTC7 |
score: 68.6 |
e-value: 3e-11 |
Identity: 25.32% |
Span: 465bp (72.7%) |
Frame: 3 |
| Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1 |
|
| 584 lower scoring hits censored -- only 25 best hits are stored. |
