| genbank/nr [blastx] | Showing best 96 hits recorded |
| Match: gi|111183162|gb|ABH07899.1| |
score: 186 |
e-value: 9e-46 |
Identity: 55.92% |
Span: 456bp (71.6%) |
Frame: 1 |
| putative polyprotein [Solanum lycopersicum] |
| Match: gi|9989054|gb|AAG10817.1|AC011808_5 |
score: 130 |
e-value: 7e-29 |
Identity: 38.51% |
Span: 519bp (81.5%) |
Frame: 1 |
| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|147796443|emb|CAN74819.1| |
score: 127 |
e-value: 8e-28 |
Identity: 36.88% |
Span: 480bp (75.4%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147774245|emb|CAN61417.1| |
score: 124 |
e-value: 5e-27 |
Identity: 37.5% |
Span: 450bp (70.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|66841323|dbj|BAD99219.1| |
score: 123 |
e-value: 1e-26 |
Identity: 36.67% |
Span: 450bp (70.6%) |
Frame: 1 |
| polypeptide with a gag-like domain [Petunia x hybrida] |
| Match: gi|147801872|emb|CAN63908.1| |
score: 122 |
e-value: 2e-26 |
Identity: 36.84% |
Span: 450bp (70.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147774435|emb|CAN59949.1| |
score: 122 |
e-value: 3e-26 |
Identity: 36.84% |
Span: 450bp (70.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147833118|emb|CAN64225.1| |
score: 121 |
e-value: 3e-26 |
Identity: 37.5% |
Span: 429bp (67.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147816002|emb|CAN65808.1| |
score: 121 |
e-value: 5e-26 |
Identity: 36.84% |
Span: 450bp (70.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|2462935|emb|CAA72989.1| |
score: 120 |
e-value: 6e-26 |
Identity: 37.5% |
Span: 453bp (71.1%) |
Frame: 1 |
| unnamed protein product [Brassica oleracea var. acephala] |
| Match: gi|147781338|emb|CAN62906.1| |
score: 120 |
e-value: 8e-26 |
Identity: 36.88% |
Span: 465bp (73.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147795862|emb|CAN74230.1| |
score: 119 |
e-value: 2e-25 |
Identity: 36.81% |
Span: 432bp (67.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147804937|emb|CAN60374.1| |
score: 118 |
e-value: 3e-25 |
Identity: 36.9% |
Span: 495bp (77.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147791344|emb|CAN66054.1| |
score: 118 |
e-value: 3e-25 |
Identity: 36.88% |
Span: 465bp (73.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147769782|emb|CAN65540.1| |
score: 117 |
e-value: 5e-25 |
Identity: 36.81% |
Span: 429bp (67.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147819437|emb|CAN64502.1| |
score: 117 |
e-value: 7e-25 |
Identity: 39.46% |
Span: 438bp (68.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147857574|emb|CAN81001.1| |
score: 116 |
e-value: 1e-24 |
Identity: 37.31% |
Span: 402bp (63.1%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147783627|emb|CAN68148.1| |
score: 116 |
e-value: 1e-24 |
Identity: 30.05% |
Span: 573bp (90.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|7267643|emb|CAB78071.1| |
score: 114 |
e-value: 7e-24 |
Identity: 32.65% |
Span: 441bp (69.2%) |
Frame: 1 |
| putative |
| Match: gi|4263646|gb|AAD15368.1| |
score: 114 |
e-value: 6e-24 |
Identity: 38.57% |
Span: 420bp (65.9%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] >gi17065314|gb|AAL32811.1| putative retroelement pol pol... |
| Match: gi|9758772|dbj|BAB09070.1| |
score: 113 |
e-value: 1e-23 |
Identity: 38.36% |
Span: 438bp (68.8%) |
Frame: 1 |
| unnamed protein product [Arabidopsis thaliana] >gi26450382|dbj|BAC42306.1| putative retroelement pol polyprotein [Ara... |
| Match: gi|147805214|emb|CAN66627.1| |
score: 112 |
e-value: 2e-23 |
Identity: 35% |
Span: 465bp (73.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147788164|emb|CAN71595.1| |
score: 112 |
e-value: 2e-23 |
Identity: 32.41% |
Span: 435bp (68.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147804686|emb|CAN69190.1| |
score: 111 |
e-value: 5e-23 |
Identity: 35.95% |
Span: 444bp (69.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|10177143|dbj|BAB10503.1| |
score: 110 |
e-value: 1e-22 |
Identity: 36.99% |
Span: 438bp (68.8%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|3513747|gb|AAC33963.1| |
score: 109 |
e-value: 2e-22 |
Identity: 32.67% |
Span: 450bp (70.6%) |
Frame: 1 |
| gi|3513747|gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score: 11.19) [Arabidopsis th... |
| Match: gi|4539372|emb|CAB40066.1| |
score: 109 |
e-value: 2e-22 |
Identity: 32.67% |
Span: 450bp (70.6%) |
Frame: 1 |
| putative |
| Match: gi|2244802|emb|CAB10225.1| |
score: 108 |
e-value: 4e-22 |
Identity: 32% |
Span: 450bp (70.6%) |
Frame: 1 |
| retrovirus-related |
| Match: gi|4586028|gb|AAD25646.1| |
score: 108 |
e-value: 3e-22 |
Identity: 35.66% |
Span: 429bp (67.3%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|158578602|gb|ABW74573.1| |
score: 107 |
e-value: 9e-22 |
Identity: 34.94% |
Span: 495bp (77.7%) |
Frame: 1 |
| putative pol polyprotein [Boechera divaricarpa] |
| Match: gi|113205377|gb|AAU93584.2| |
score: 107 |
e-value: 7e-22 |
Identity: 38.69% |
Span: 501bp (78.6%) |
Frame: 1 |
| Polyprotein, putative [Solanum demissum] |
| Match: gi|110737688|dbj|BAF00783.1| |
score: 106 |
e-value: 2e-21 |
Identity: 35.62% |
Span: 438bp (68.8%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|7767664|gb|AAF69161.1|AC007915_13 |
score: 106 |
e-value: 1e-21 |
Identity: 31.58% |
Span: 546bp (85.7%) |
Frame: 1 |
| F27F5.19 [Arabidopsis thaliana] |
| Match: gi|4206207|gb|AAD11595.1| |
score: 105 |
e-value: 2e-21 |
Identity: 37.01% |
Span: 459bp (72.1%) |
Frame: 1 |
| putative reverse transcriptase [Arabidopsis thaliana] >gi4263040|gb|AAD15309.1| putative reverse transcriptase [Arabi... |
| Match: gi|4678197|gb|AAD26943.1| |
score: 104 |
e-value: 4e-21 |
Identity: 35.66% |
Span: 429bp (67.3%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147778858|emb|CAN73696.1| |
score: 104 |
e-value: 4e-21 |
Identity: 35.17% |
Span: 429bp (67.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147780359|emb|CAN59936.1| |
score: 103 |
e-value: 8e-21 |
Identity: 36.57% |
Span: 399bp (62.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|124359649|gb|ABD32334.2| |
score: 102 |
e-value: 2e-20 |
Identity: 40.32% |
Span: 372bp (58.4%) |
Frame: 1 |
| Polynucleotidyl |
| Match: gi|147843692|emb|CAN79868.1| |
score: 100 |
e-value: 8e-20 |
Identity: 35.07% |
Span: 396bp (62.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|147785051|emb|CAN77739.1| |
score: 98.2 |
e-value: 4e-19 |
Identity: 43.14% |
Span: 306bp (48.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|87240899|gb|ABD32757.1| |
score: 97.1 |
e-value: 9e-19 |
Identity: 34.01% |
Span: 441bp (69.2%) |
Frame: 1 |
| Integrase, |
| Match: gi|147861359|emb|CAN83990.1| |
score: 94.4 |
e-value: 6e-18 |
Identity: 34.43% |
Span: 366bp (57.5%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|2194136|gb|AAB61111.1| |
score: 94.4 |
e-value: 6e-18 |
Identity: 41.07% |
Span: 336bp (52.7%) |
Frame: 1 |
| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein (gbU12626) [Arabidopsis thaliana] |
| Match: gi|147773401|emb|CAN73437.1| |
score: 93.2 |
e-value: 1e-17 |
Identity: 35.65% |
Span: 339bp (53.2%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147805915|emb|CAN76546.1| |
score: 92.4 |
e-value: 2e-17 |
Identity: 29.14% |
Span: 444bp (69.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|15218961|ref|NP_173550.1| |
score: 91.3 |
e-value: 5e-17 |
Identity: 32.8% |
Span: 375bp (58.9%) |
Frame: 1 |
| gi|15218961|ref|NP_173550.1| hypothetical protein [Arabidopsis thaliana] gi|28393025|gb|AAO41947.1| unknown protein [... |
| Match: gi|52354133|gb|AAU44387.1| |
score: 91.3 |
e-value: 5e-17 |
Identity: 32.8% |
Span: 375bp (58.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|2245104|emb|CAB10526.1| |
score: 89.4 |
e-value: 2e-16 |
Identity: 29.26% |
Span: 540bp (84.8%) |
Frame: 1 |
| retrotransposon like protein [Arabidopsis thaliana] >gi7268497|emb|CAB78748.1| retrotransposon like protein [Arabidop... |
| Match: gi|147816137|emb|CAN62065.1| |
score: 89 |
e-value: 2e-16 |
Identity: 32.77% |
Span: 357bp (56.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147778633|emb|CAN76111.1| |
score: 88.6 |
e-value: 3e-16 |
Identity: 35.65% |
Span: 339bp (53.2%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147863323|emb|CAN78357.1| |
score: 87.8 |
e-value: 6e-16 |
Identity: 33.87% |
Span: 369bp (57.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|3695393|gb|AAC62795.1| |
score: 86.7 |
e-value: 1e-15 |
Identity: 34.51% |
Span: 339bp (53.2%) |
Frame: 1 |
| gi|3695393|gb|AAC62795.1| contains similarity to retroviral aspartyl proteases (Pfam: rvp.hmm, score: 11.80) [Arabido... |
| Match: gi|9758329|dbj|BAB08885.1| |
score: 84.7 |
e-value: 5e-15 |
Identity: 28.47% |
Span: 432bp (67.8%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|46518391|gb|AAS99677.1| |
score: 84.3 |
e-value: 6e-15 |
Identity: 28.76% |
Span: 456bp (71.6%) |
Frame: 1 |
| gi|46518391|gb|AAS99677.1| At1g21220 [Arabidopsis thaliana] >gi|48310400|gb|AAT41813.1| At1g21220 [Arabidopsis thalia... |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 84 |
e-value: 8e-15 |
Identity: 27.03% |
Span: 444bp (69.7%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|147768125|emb|CAN71652.1| |
score: 84 |
e-value: 8e-15 |
Identity: 26.53% |
Span: 438bp (68.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|147807471|emb|CAN66188.1| |
score: 83.6 |
e-value: 1e-14 |
Identity: 37.74% |
Span: 312bp (49.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147773304|emb|CAN75909.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 40.21% |
Span: 288bp (45.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|147766660|emb|CAN67322.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 31.54% |
Span: 438bp (68.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|2961349|emb|CAA18107.1| |
score: 82.4 |
e-value: 2e-14 |
Identity: 28.57% |
Span: 441bp (69.2%) |
Frame: 1 |
| LTR retrotransposon like protein [Arabidopsis thaliana] >gi7269049|emb|CAB79159.1| LTR retrotransposon like protein [... |
| Match: gi|12321355|gb|AAG50751.1|AC079733_19 |
score: 82.4 |
e-value: 2e-14 |
Identity: 28.57% |
Span: 441bp (69.2%) |
Frame: 1 |
| polyprotein, putative [Arabidopsis thaliana] |
| Match: gi|4388829|gb|AAD19784.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 25% |
Span: 444bp (69.7%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147841353|emb|CAN71241.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 37.89% |
Span: 285bp (44.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|3779026|gb|AAC67205.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 26.35% |
Span: 444bp (69.7%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147787640|emb|CAN60829.1| |
score: 81.3 |
e-value: 5e-14 |
Identity: 42.68% |
Span: 246bp (38.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|147799759|emb|CAN75051.1| |
score: 80.9 |
e-value: 7e-14 |
Identity: 30.22% |
Span: 414bp (65.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|9759493|dbj|BAB10743.1| |
score: 80.5 |
e-value: 9e-14 |
Identity: 28.57% |
Span: 441bp (69.2%) |
Frame: 1 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|147809827|emb|CAN73765.1| |
score: 79.3 |
e-value: 2e-13 |
Identity: 27.34% |
Span: 414bp (65.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|2642431|gb|AAB87099.1| |
score: 78.6 |
e-value: 3e-13 |
Identity: 26.38% |
Span: 489bp (76.8%) |
Frame: 1 |
| putative retroelement pol polyprotein [Arabidopsis thaliana] |
| Match: gi|147846217|emb|CAN79491.1| |
score: 78.2 |
e-value: 4e-13 |
Identity: 27.27% |
Span: 393bp (61.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|157355555|emb|CAO48955.1| |
score: 78.2 |
e-value: 4e-13 |
Identity: 36.75% |
Span: 333bp (52.3%) |
Frame: 1 |
| unnamed |
| Match: gi|147811713|emb|CAN65966.1| |
score: 77.4 |
e-value: 8e-13 |
Identity: 29.46% |
Span: 384bp (60.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|147818439|emb|CAN60732.1| |
score: 77.4 |
e-value: 8e-13 |
Identity: 26.19% |
Span: 498bp (78.2%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|110741688|dbj|BAE98790.1| |
score: 77.4 |
e-value: 8e-13 |
Identity: 37.6% |
Span: 372bp (58.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|147858105|emb|CAN81016.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 30.34% |
Span: 432bp (67.8%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147856198|emb|CAN80285.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 26.62% |
Span: 414bp (65.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147822046|emb|CAN65820.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 30.82% |
Span: 435bp (68.3%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|157330037|emb|CAO43473.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 36.84% |
Span: 228bp (35.8%) |
Frame: 1 |
| unnamed |
| Match: gi|8777581|dbj|BAA97099.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 26.39% |
Span: 432bp (67.8%) |
Frame: 1 |
| gi|8777581|dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|157355688|emb|CAO49505.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 34.02% |
Span: 285bp (44.7%) |
Frame: 1 |
| unnamed |
| Match: gi|147772051|emb|CAN77940.1| |
score: 75.9 |
e-value: 2e-12 |
Identity: 38.71% |
Span: 273bp (42.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|9954746|gb|AAG09097.1|AC009323_8 |
score: 74.7 |
e-value: 5e-12 |
Identity: 29.71% |
Span: 414bp (65.0%) |
Frame: 1 |
| Putative retroelement polyprotein [Arabidopsis thaliana] |
| Match: gi|147771937|emb|CAN75698.1| |
score: 73.9 |
e-value: 8e-12 |
Identity: 25.76% |
Span: 393bp (61.7%) |
Frame: 1 |
| hypothetical |
| Match: gi|12322504|gb|AAG51258.1|AC025782_3 |
score: 73.6 |
e-value: 1e-11 |
Identity: 26.53% |
Span: 441bp (69.2%) |
Frame: 1 |
| Ty1/copia-element polyprotein [Arabidopsis thaliana] |
| Match: gi|5306241|gb|AAD41974.1| |
score: 73.6 |
e-value: 1e-11 |
Identity: 31.62% |
Span: 408bp (64.1%) |
Frame: 1 |
| putative |
| Match: gi|147863169|emb|CAN80919.1| |
score: 73.6 |
e-value: 1e-11 |
Identity: 28.66% |
Span: 465bp (73.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147833069|emb|CAN75292.1| |
score: 73.6 |
e-value: 1e-11 |
Identity: 35.92% |
Span: 303bp (47.6%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|50253554|gb|AAT71979.1| |
score: 73.2 |
e-value: 1e-11 |
Identity: 29.71% |
Span: 414bp (65.0%) |
Frame: 1 |
| At5g39185 [Arabidopsis thaliana] |
| Match: gi|10177558|dbj|BAB10837.1| |
score: 73.2 |
e-value: 1e-11 |
Identity: 29.71% |
Span: 414bp (65.0%) |
Frame: 1 |
| retroelement |
| Match: gi|147860024|emb|CAN83125.1| |
score: 72 |
e-value: 3e-11 |
Identity: 28.06% |
Span: 414bp (65.0%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|147834993|emb|CAN76913.1| |
score: 72 |
e-value: 3e-11 |
Identity: 28% |
Span: 447bp (70.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|147801255|emb|CAN74847.1| |
score: 72 |
e-value: 3e-11 |
Identity: 28.86% |
Span: 444bp (69.7%) |
Frame: 1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|114053447|gb|AAT40537.2| |
score: 71.6 |
e-value: 4e-11 |
Identity: 38.36% |
Span: 219bp (34.4%) |
Frame: 1 |
| hypothetical |
| Match: gi|157337614|emb|CAO21960.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 39.33% |
Span: 261bp (41.0%) |
Frame: 1 |
| unnamed |
| Match: gi|157352669|emb|CAO44484.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 39.33% |
Span: 261bp (41.0%) |
Frame: 1 |
| unnamed |
| Match: gi|147767056|emb|CAN69872.1| |
score: 70.5 |
e-value: 9e-11 |
Identity: 26.15% |
Span: 387bp (60.8%) |
Frame: 1 |
| hypothetical |
|
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1G21280.1 |
score: 91.3 |
e-value: 4e-19 |
Identity: 32.8% |
Span: 375bp (58.9%) |
Frame: 1 |
| similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43940.1); similar to Integrase, catalytic re (GB:ABE8561... |
|
| swissprot [blastx] | Showing best 0 hits recorded |
|
