| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|30692868|ref|NP_198446.3| |
score: 245.7 |
e-value: 3.6e-76 |
Identity: 84.89% |
Span: 417bp (66.1%) |
Frame: 2 |
| DNA-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|9758800|dbj|BAB09253.1| |
score: 245.7 |
e-value: 3.6e-76 |
Identity: 84.89% |
Span: 417bp (66.1%) |
Frame: 2 |
| DNA helicase-like [Arabidopsis thaliana] |
| Match: gi|13928794|ref|NP_113774.1| |
score: 111.3 |
e-value: 1.3e-27 |
Identity: 51.75% |
Span: 342bp (54.2%) |
Frame: 2 |
| immunoglobulin mu binding protein 2 [Rattus norvegicus] >gi81917357|sp|Q9EQN5.1|SMBP2_RAT RecName: Full=DNA-binding p... |
| Match: gi|6678029|ref|NP_033238.1| |
score: 110.9 |
e-value: 3.7e-27 |
Identity: 51.75% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|6678029|ref|NP_033238.1| immunoglobulin mu binding protein 2; immunoglobulin S mu binding protein 2; antifreeze en... |
| Match: gi|2498040|sp|Q60560|SMB2_MESAU |
score: 110.5 |
e-value: 1.8e-26 |
Identity: 51.75% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|2498040|sp|Q60560|SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2 (IMMUNOGLOBULIN MU BINDING PROTEIN 2) (SMUBP-2) (INSULIN ... |
| Match: gi|908917|gb|AAA70430.1| |
score: 106.3 |
e-value: 6.6e-26 |
Identity: 50.88% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens] |
| Match: gi|4504623|ref|NP_002171.1| |
score: 105.1 |
e-value: 1.5e-25 |
Identity: 50% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|4504623|ref|NP_002171.1| immunoglobulin mu binding protein 2; Spinal muscular atrophy with respiratory distress 1 ... |
| Match: gi|1082534|pir||A47500 |
score: 105.1 |
e-value: 1.5e-25 |
Identity: 50% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|1082534|pir||A47500 Ig mu chain switch region binding protein 2 - human |
| Match: gi|7446669|pir||T02699 |
score: 103.2 |
e-value: 1.6e-24 |
Identity: 46.49% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|7446669|pir||T02699 probable helicase At2g03270 [imported] - Arabidopsis thaliana |
| Match: gi|18395518|ref|NP_565299.1| |
score: 103.2 |
e-value: 1.6e-24 |
Identity: 46.49% |
Span: 342bp (54.2%) |
Frame: 2 |
| DNA-binding protein, putative [Arabidopsis thaliana] >gi15027927|gb|AAK76494.1| putative helicase [Arabidopsis thalia... |
| Match: gi|11191231|emb|CAC16347.1| |
score: 103.2 |
e-value: 1.6e-24 |
Identity: 46.49% |
Span: 342bp (54.2%) |
Frame: 2 |
| putative helicase [Arabidopsis thaliana] |
| Match: gi|28828207|gb|AAO50888.1| |
score: 101.7 |
e-value: 1.8e-26 |
Identity: 41.26% |
Span: 417bp (66.1%) |
Frame: 2 |
| gi|28828207|gb|AAO50888.1| similar to Rattus norvegicus (Rat). Antifreeze-enhancer binding protein AEP [Dictyostelium... |
| Match: gi|32471647|ref|NP_864640.1| |
score: 89.35 |
e-value: 3.2e-17 |
Identity: 40.46% |
Span: 393bp (62.3%) |
Frame: 2 |
| gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Pirellula sp.] gi|32397018|emb|CAD72321.1| DNA-binding prot... |
| Match: gi|32414403|ref|XP_327681.1| |
score: 75.87 |
e-value: 1.6e-15 |
Identity: 35.86% |
Span: 402bp (63.7%) |
Frame: 2 |
| gi|32414403|ref|XP_327681.1| hypothetical protein [Neurospora crassa] gi|28919845|gb|EAA29243.1| hypothetical protein... |
| Match: gi|38101942|gb|EAA48840.1| |
score: 71.63 |
e-value: 7.7e-15 |
Identity: 33.33% |
Span: 345bp (54.7%) |
Frame: 2 |
| gi|38101942|gb|EAA48840.1| hypothetical protein MG00498.4 [Magnaporthe grisea 70-15] |
| Match: gi|6323726|ref|NP_013797.1| |
score: 70.48 |
e-value: 2e-11 |
Identity: 42.86% |
Span: 312bp (49.4%) |
Frame: 2 |
| gi|6323726|ref|NP_013797.1| Involved in mRNA degradation; Nam7p [Saccharomyces cerevisiae] gi|400350|sp|P30771|NAM7_Y... |
| Match: gi|28278858|gb|AAH45353.1| |
score: 69.71 |
e-value: 2.3e-13 |
Identity: 41.67% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|28278858|gb|AAH45353.1| Similar to regulator of nonsense transcripts 1 [Danio rerio] |
| Match: gi|38102483|gb|EAA49318.1| |
score: 69.71 |
e-value: 2.2e-14 |
Identity: 39.05% |
Span: 312bp (49.4%) |
Frame: 2 |
| gi|38102483|gb|EAA49318.1| hypothetical protein MG00976.4 [Magnaporthe grisea 70-15] |
| Match: gi|17510845|ref|NP_492670.1| |
score: 69.32 |
e-value: 4.4e-11 |
Identity: 34.48% |
Span: 333bp (52.8%) |
Frame: 2 |
| gi|17510845|ref|NP_492670.1| putative protein of ancient origin (1K696Co) [Caenorhabditis elegans] gi|7509302|pir||T2... |
| Match: gi|19569060|gb|AAL92018.1| |
score: 68.94 |
e-value: 5.7e-11 |
Identity: 39.25% |
Span: 312bp (49.4%) |
Frame: 2 |
| UPF1 [Arabidopsis thaliana] |
| Match: gi|30695086|ref|NP_199512.2| |
score: 68.94 |
e-value: 5.7e-11 |
Identity: 39.25% |
Span: 312bp (49.4%) |
Frame: 2 |
| LBA1 (LOW-LEVEL BETA-AMYLASE 1); ATP binding / DNA binding / RNA helicase/ hydrolase [Arabidopsis thaliana] >gi889846... |
| Match: gi|18202906|sp|Q9FJR0|RNT1_ARATH |
score: 68.94 |
e-value: 5.7e-11 |
Identity: 39.25% |
Span: 312bp (49.4%) |
Frame: 2 |
| gi|18202906|sp|Q9FJR0|RNT1_ARATH Regulator of nonsense transcripts 1 homolog gi|9759443|dbj|BAB10240.1| prematurely t... |
| Match: gi|18375673|ref|NP_002902.2| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| regulator of nonsense transcripts 1 [Homo sapiens] >gi2739355|gb|AAB94785.1| pNORF1 [Homo sapiens] >gi|3328175|gb|AAC... |
| Match: gi|15607027|ref|NP_214409.1| |
score: 68.55 |
e-value: 1.7e-14 |
Identity: 37.04% |
Span: 324bp (51.3%) |
Frame: 2 |
| gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus] gi|7514764|pir||D70476 DNA helicase - Aquifex aeolicus g... |
| Match: gi|17380291|sp|Q92900|RNT1_HUMAN |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|17380291|sp|Q92900|RNT1_HUMAN Regulator of nonsense transcripts 1 (Nonsense mRNA reducing factor 1) (NORF1) (Up-fr... |
| Match: gi|1944407|dbj|BAA19664.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|1944407|dbj|BAA19664.1| KIAA0221 [Homo sapiens] |
| Match: gi|33989570|gb|AAH56442.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|33989570|gb|AAH56442.1| Rent1 protein [Mus musculus] |
| Match: gi|1575536|gb|AAC50771.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| regulator of nonsense transcript stability [Homo sapiens] |
| Match: gi|1885356|gb|AAC51140.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| homolog of yeast UPF1 [Homo sapiens] |
| Match: gi|38089666|ref|XP_356130.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|38089666|ref|XP_356130.1| similar to regulator of nonsense transcripts 1 [Mus musculus] gi|17380292|sp|Q9EPU0|RNT1... |
| Match: gi|13507601|ref|NP_109605.1| |
score: 68.55 |
e-value: 5.1e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|13507601|ref|NP_109605.1| regulator of nonsense transcripts 1; nonsense mRNA reducing factor 1 [Mus musculus] gi|1... |
| Match: gi|21410895|gb|AAH30916.1| |
score: 68.55 |
e-value: 5.2e-13 |
Identity: 40.62% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|21410895|gb|AAH30916.1| Rent1 protein [Mus musculus] |
| Match: gi|31243165|ref|XP_322028.1| |
score: 68.17 |
e-value: 9.7e-11 |
Identity: 36.67% |
Span: 354bp (56.1%) |
Frame: 2 |
| gi|31243165|ref|XP_322028.1| ENSANGP00000004153 [Anopheles gambiae] gi|21288714|gb|EAA01007.1| ENSANGP00000004153 [An... |
| Match: gi|32405938|ref|XP_323582.1| |
score: 67.78 |
e-value: 3.9e-13 |
Identity: 36.84% |
Span: 339bp (53.7%) |
Frame: 2 |
| gi|32405938|ref|XP_323582.1| hypothetical protein ( (AL451022) probable nonsense-mediated mRNA decay protein [Neurosp... |
| Match: gi|19075869|ref|NP_588369.1| |
score: 67.78 |
e-value: 1.5e-12 |
Identity: 33.33% |
Span: 342bp (54.2%) |
Frame: 2 |
| gi|19075869|ref|NP_588369.1| putative dna-binding protein [Schizosaccharomyces pombe] gi|7492541|pir||T41580 probable... |
| Match: gi|23135724|ref|ZP_00117461.1| |
score: 66.63 |
e-value: 2.8e-10 |
Identity: 39.8% |
Span: 294bp (46.6%) |
Frame: 2 |
| gi|23135724|ref|ZP_00117461.1| COG1112: Superfamily I DNA and RNA helicases and helicase subunits [Cytophaga hutchins... |
| Match: gi|19577367|emb|CAD28448.1| |
score: 65.08 |
e-value: 8.6e-13 |
Identity: 38.1% |
Span: 312bp (49.4%) |
Frame: 2 |
| gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus] |
| Match: gi|20093510|ref|NP_613357.1| |
score: 64.31 |
e-value: 1.4e-09 |
Identity: 43.16% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|20093510|ref|NP_613357.1| Superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19] gi|19886342|gb|AAM01287.1| S... |
| Match: gi|23507861|ref|NP_700531.1| |
score: 63.93 |
e-value: 1.8e-09 |
Identity: 34.51% |
Span: 336bp (53.2%) |
Frame: 2 |
| gi|23507861|ref|NP_700531.1| regulator of nonsense transcripts, putative [Plasmodium falciparum 3D7] gi|23494920|gb|A... |
| Match: gi|18859757|ref|NP_572767.1| |
score: 63.54 |
e-value: 2.4e-09 |
Identity: 36.79% |
Span: 312bp (49.4%) |
Frame: 2 |
| gi|18859757|ref|NP_572767.1| CG1559-PA [Drosophila melanogaster] gi|27923995|sp|Q9VYS3|RNT1_DROME Regulator of nonsen... |
| Match: gi|34901794|ref|NP_912243.1| |
score: 63.16 |
e-value: 2e-11 |
Identity: 41.3% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|34901794|ref|NP_912243.1| putaitive UPF1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34393729|dbj|BAC83244.1| |
score: 63.16 |
e-value: 2e-11 |
Identity: 41.3% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|34393729|dbj|BAC83244.1| putative regulator of nonsense transcripts 1 homolog [Oryza sativa (japonica cultivar-gro... |
| Match: gi|2130283|pir||S62476 |
score: 63.16 |
e-value: 1.2e-11 |
Identity: 37.74% |
Span: 303bp (48.0%) |
Frame: 2 |
| gi|2130283|pir||S62476 hypothetical protein SPAC16C9.06c - fission yeast (Schizosaccharomyces pombe) |
| Match: gi|19113992|ref|NP_593080.1| |
score: 63.16 |
e-value: 1.2e-11 |
Identity: 37.74% |
Span: 303bp (48.0%) |
Frame: 2 |
| gi|19113992|ref|NP_593080.1| putative regulator of nonsense transcript stability [Schizosaccharomyces pombe] gi|19924... |
| Match: gi|6322835|ref|NP_012908.1| |
score: 62.39 |
e-value: 5.3e-09 |
Identity: 35.43% |
Span: 345bp (54.7%) |
Frame: 2 |
| gi|6322835|ref|NP_012908.1| DNA helicase 1; Hcs1p [Saccharomyces cerevisiae] gi|465704|sp|P34243|YKB7_YEAST HYPOTHETI... |
| Match: gi|30692868|ref|NP_198446.3| |
score: 62 |
e-value: 3.6e-76 |
Identity: 78.95% |
Span: 114bp (18.1%) |
Frame: 3 |
| DNA-binding protein, putative [Arabidopsis thaliana] |
| Match: gi|9758800|dbj|BAB09253.1| |
score: 62 |
e-value: 3.6e-76 |
Identity: 78.95% |
Span: 114bp (18.1%) |
Frame: 3 |
| DNA helicase-like [Arabidopsis thaliana] |
| Match: gi|29347483|ref|NP_810986.1| |
score: 61.23 |
e-value: 1.2e-08 |
Identity: 37.89% |
Span: 285bp (45.2%) |
Frame: 2 |
| gi|29347483|ref|NP_810986.1| putative helicase [Bacteroides thetaiotaomicron VPI-5482] gi|29339383|gb|AAO77180.1| put... |
| Match: gi|24214798|ref|NP_712279.1| |
score: 61.23 |
e-value: 2.2e-09 |
Identity: 45.88% |
Span: 252bp (39.9%) |
Frame: 2 |
| gi|24214798|ref|NP_712279.1| putative helicase [Leptospira interrogans serovar lai str. 56601] gi|24195805|gb|AAN4929... |
| Match: gi|23485801|gb|EAA20580.1| |
score: 60.08 |
e-value: 2.6e-08 |
Identity: 39.08% |
Span: 258bp (40.9%) |
Frame: 2 |
| gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii] |
| Match: gi|19074775|ref|NP_586281.1| |
score: 58.54 |
e-value: 7.7e-08 |
Identity: 39.51% |
Span: 240bp (38.0%) |
Frame: 2 |
| gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY) [Encephalitozoon cuniculi] gi... |
| Match: gi|15218803|ref|NP_176754.1| |
score: 58.15 |
e-value: 1e-07 |
Identity: 43.18% |
Span: 258bp (40.9%) |
Frame: 2 |
| gi|15218803|ref|NP_176754.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|15642780|ref|NP_227821.1| |
score: 58.15 |
e-value: 9.6e-11 |
Identity: 41.3% |
Span: 276bp (43.7%) |
Frame: 2 |
| gi|15642780|ref|NP_227821.1| DNA helicase, putative [Thermotoga maritima] gi|7446667|pir||G72429 hypothetical protein... |
| Match: gi|25404947|pir||B96682 |
score: 58.15 |
e-value: 1e-07 |
Identity: 43.18% |
Span: 258bp (40.9%) |
Frame: 2 |
| gi|25404947|pir||B96682 protein F1E22.14 [imported] - Arabidopsis thaliana gi|6686403|gb|AAF23837.1| F1E22.14 [Arabid... |
| Match: gi|18845092|gb|AAL79550.1| |
score: 57.38 |
e-value: 1.7e-07 |
Identity: 29.77% |
Span: 393bp (62.3%) |
Frame: 2 |
| gi|18845092|gb|AAL79550.1| helicase [Xenopus laevis] |
| Match: gi|32488773|emb|CAE04326.1| |
score: 56.22 |
e-value: 2.2e-08 |
Identity: 37.5% |
Span: 240bp (38.0%) |
Frame: 2 |
| gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38100409|gb|EAA47541.1| |
score: 54.3 |
e-value: 2e-10 |
Identity: 39.33% |
Span: 264bp (41.8%) |
Frame: 2 |
| gi|38100409|gb|EAA47541.1| hypothetical protein MG02784.4 [Magnaporthe grisea 70-15] |
| Match: gi|15221015|ref|NP_172361.1| |
score: 52.76 |
e-value: 2.2e-08 |
Identity: 36.96% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|15221015|ref|NP_172361.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|7485995|pir||T00740 |
score: 52.76 |
e-value: 2.2e-08 |
Identity: 36.96% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|7485995|pir||T00740 hypothetical protein F22O13.35 - Arabidopsis thaliana |
| Match: gi|34896974|ref|NP_909833.1| |
score: 49.68 |
e-value: 3e-07 |
Identity: 38.55% |
Span: 246bp (39.0%) |
Frame: 2 |
| gi|34896974|ref|NP_909833.1| putative component of a tRNA splicing complex [Oryza sativa (japonica cultivar-group)] g... |
| Match: gi|15790495|ref|NP_280319.1| |
score: 47.75 |
e-value: 3e-07 |
Identity: 39.58% |
Span: 279bp (44.2%) |
Frame: 2 |
| gi|15790495|ref|NP_280319.1| DNA helicase; Hel [Halobacterium sp. NRC-1] gi|25410155|pir||C84304 DNA helicase [import... |
| Match: gi|28828207|gb|AAO50888.1| |
score: 39.66 |
e-value: 1.8e-26 |
Identity: 42.11% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|28828207|gb|AAO50888.1| similar to Rattus norvegicus (Rat). Antifreeze-enhancer binding protein AEP [Dictyostelium... |
| Match: gi|13928794|ref|NP_113774.1| |
score: 33.88 |
e-value: 1.3e-27 |
Identity: 52.5% |
Span: 111bp (17.6%) |
Frame: 3 |
| immunoglobulin mu binding protein 2 [Rattus norvegicus] >gi81917357|sp|Q9EQN5.1|SMBP2_RAT RecName: Full=DNA-binding p... |
| Match: gi|908917|gb|AAA70430.1| |
score: 33.11 |
e-value: 6.6e-26 |
Identity: 52.5% |
Span: 111bp (17.6%) |
Frame: 3 |
| gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens] |
| Match: gi|1082534|pir||A47500 |
score: 33.11 |
e-value: 1.5e-25 |
Identity: 52.5% |
Span: 111bp (17.6%) |
Frame: 3 |
| gi|1082534|pir||A47500 Ig mu chain switch region binding protein 2 - human |
| Match: gi|4504623|ref|NP_002171.1| |
score: 33.11 |
e-value: 1.5e-25 |
Identity: 52.5% |
Span: 111bp (17.6%) |
Frame: 3 |
| gi|4504623|ref|NP_002171.1| immunoglobulin mu binding protein 2; Spinal muscular atrophy with respiratory distress 1 ... |
| Match: gi|38100409|gb|EAA47541.1| |
score: 32.73 |
e-value: 2e-10 |
Identity: 51.35% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|38100409|gb|EAA47541.1| hypothetical protein MG02784.4 [Magnaporthe grisea 70-15] |
| Match: gi|6678029|ref|NP_033238.1| |
score: 32.73 |
e-value: 3.7e-27 |
Identity: 47.5% |
Span: 111bp (17.6%) |
Frame: 3 |
| gi|6678029|ref|NP_033238.1| immunoglobulin mu binding protein 2; immunoglobulin S mu binding protein 2; antifreeze en... |
| Match: gi|15607027|ref|NP_214409.1| |
score: 32.34 |
e-value: 1.7e-14 |
Identity: 52.78% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus] gi|7514764|pir||D70476 DNA helicase - Aquifex aeolicus g... |
| Match: gi|11191231|emb|CAC16347.1| |
score: 31.57 |
e-value: 1.6e-24 |
Identity: 50% |
Span: 114bp (18.1%) |
Frame: 3 |
| putative helicase [Arabidopsis thaliana] |
| Match: gi|18395518|ref|NP_565299.1| |
score: 31.57 |
e-value: 1.6e-24 |
Identity: 50% |
Span: 114bp (18.1%) |
Frame: 3 |
| DNA-binding protein, putative [Arabidopsis thaliana] >gi15027927|gb|AAK76494.1| putative helicase [Arabidopsis thalia... |
| Match: gi|7446669|pir||T02699 |
score: 31.57 |
e-value: 1.6e-24 |
Identity: 50% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|7446669|pir||T02699 probable helicase At2g03270 [imported] - Arabidopsis thaliana |
| Match: gi|38102483|gb|EAA49318.1| |
score: 30.8 |
e-value: 2.2e-14 |
Identity: 50% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|38102483|gb|EAA49318.1| hypothetical protein MG00976.4 [Magnaporthe grisea 70-15] |
| Match: gi|2498040|sp|Q60560|SMB2_MESAU |
score: 30.8 |
e-value: 1.8e-26 |
Identity: 45% |
Span: 111bp (17.6%) |
Frame: 3 |
| gi|2498040|sp|Q60560|SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2 (IMMUNOGLOBULIN MU BINDING PROTEIN 2) (SMUBP-2) (INSULIN ... |
| Match: gi|38101942|gb|EAA48840.1| |
score: 30.42 |
e-value: 7.7e-15 |
Identity: 47.37% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|38101942|gb|EAA48840.1| hypothetical protein MG00498.4 [Magnaporthe grisea 70-15] |
| Match: gi|19577367|emb|CAD28448.1| |
score: 30.03 |
e-value: 8.6e-13 |
Identity: 44.44% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus] |
| Match: gi|15642780|ref|NP_227821.1| |
score: 30.03 |
e-value: 9.6e-11 |
Identity: 44.44% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|15642780|ref|NP_227821.1| DNA helicase, putative [Thermotoga maritima] gi|7446667|pir||G72429 hypothetical protein... |
| Match: gi|32405938|ref|XP_323582.1| |
score: 28.49 |
e-value: 3.9e-13 |
Identity: 44.44% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|32405938|ref|XP_323582.1| hypothetical protein ( (AL451022) probable nonsense-mediated mRNA decay protein [Neurosp... |
| Match: gi|15790495|ref|NP_280319.1| |
score: 28.49 |
e-value: 3e-07 |
Identity: 42.86% |
Span: 105bp (16.6%) |
Frame: 3 |
| gi|15790495|ref|NP_280319.1| DNA helicase; Hel [Halobacterium sp. NRC-1] gi|25410155|pir||C84304 DNA helicase [import... |
| Match: gi|32414403|ref|XP_327681.1| |
score: 28.49 |
e-value: 1.6e-15 |
Identity: 44.74% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|32414403|ref|XP_327681.1| hypothetical protein [Neurospora crassa] gi|28919845|gb|EAA29243.1| hypothetical protein... |
| Match: gi|2130283|pir||S62476 |
score: 28.11 |
e-value: 1.2e-11 |
Identity: 44.44% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|2130283|pir||S62476 hypothetical protein SPAC16C9.06c - fission yeast (Schizosaccharomyces pombe) |
| Match: gi|19113992|ref|NP_593080.1| |
score: 28.11 |
e-value: 1.2e-11 |
Identity: 44.44% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|19113992|ref|NP_593080.1| putative regulator of nonsense transcript stability [Schizosaccharomyces pombe] gi|19924... |
| Match: gi|15221015|ref|NP_172361.1| |
score: 27.34 |
e-value: 2.2e-08 |
Identity: 48.65% |
Span: 105bp (16.6%) |
Frame: 3 |
| gi|15221015|ref|NP_172361.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|17380291|sp|Q92900|RNT1_HUMAN |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|17380291|sp|Q92900|RNT1_HUMAN Regulator of nonsense transcripts 1 (Nonsense mRNA reducing factor 1) (NORF1) (Up-fr... |
| Match: gi|7485995|pir||T00740 |
score: 27.34 |
e-value: 2.2e-08 |
Identity: 48.65% |
Span: 105bp (16.6%) |
Frame: 3 |
| gi|7485995|pir||T00740 hypothetical protein F22O13.35 - Arabidopsis thaliana |
| Match: gi|28278858|gb|AAH45353.1| |
score: 27.34 |
e-value: 2.3e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|28278858|gb|AAH45353.1| Similar to regulator of nonsense transcripts 1 [Danio rerio] |
| Match: gi|33989570|gb|AAH56442.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|33989570|gb|AAH56442.1| Rent1 protein [Mus musculus] |
| Match: gi|34393729|dbj|BAC83244.1| |
score: 27.34 |
e-value: 2e-11 |
Identity: 41.67% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|34393729|dbj|BAC83244.1| putative regulator of nonsense transcripts 1 homolog [Oryza sativa (japonica cultivar-gro... |
| Match: gi|21410895|gb|AAH30916.1| |
score: 27.34 |
e-value: 5.2e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|21410895|gb|AAH30916.1| Rent1 protein [Mus musculus] |
| Match: gi|13507601|ref|NP_109605.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|13507601|ref|NP_109605.1| regulator of nonsense transcripts 1; nonsense mRNA reducing factor 1 [Mus musculus] gi|1... |
| Match: gi|38089666|ref|XP_356130.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|38089666|ref|XP_356130.1| similar to regulator of nonsense transcripts 1 [Mus musculus] gi|17380292|sp|Q9EPU0|RNT1... |
| Match: gi|18375673|ref|NP_002902.2| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| regulator of nonsense transcripts 1 [Homo sapiens] >gi2739355|gb|AAB94785.1| pNORF1 [Homo sapiens] >gi|3328175|gb|AAC... |
| Match: gi|1885356|gb|AAC51140.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| homolog of yeast UPF1 [Homo sapiens] |
| Match: gi|1575536|gb|AAC50771.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| regulator of nonsense transcript stability [Homo sapiens] |
| Match: gi|34901794|ref|NP_912243.1| |
score: 27.34 |
e-value: 2e-11 |
Identity: 41.67% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|34901794|ref|NP_912243.1| putaitive UPF1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|1944407|dbj|BAA19664.1| |
score: 27.34 |
e-value: 5.1e-13 |
Identity: 36.11% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|1944407|dbj|BAA19664.1| KIAA0221 [Homo sapiens] |
| Match: gi|19075869|ref|NP_588369.1| |
score: 26.56 |
e-value: 1.5e-12 |
Identity: 44.74% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|19075869|ref|NP_588369.1| putative dna-binding protein [Schizosaccharomyces pombe] gi|7492541|pir||T41580 probable... |
| Match: gi|32488773|emb|CAE04326.1| |
score: 23.87 |
e-value: 2.2e-08 |
Identity: 40% |
Span: 105bp (16.6%) |
Frame: 3 |
| gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|24214798|ref|NP_712279.1| |
score: 22.33 |
e-value: 2.2e-09 |
Identity: 26.32% |
Span: 114bp (18.1%) |
Frame: 3 |
| gi|24214798|ref|NP_712279.1| putative helicase [Leptospira interrogans serovar lai str. 56601] gi|24195805|gb|AAN4929... |
| Match: gi|32471647|ref|NP_864640.1| |
score: 20.79 |
e-value: 3.2e-17 |
Identity: 30.56% |
Span: 108bp (17.1%) |
Frame: 3 |
| gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Pirellula sp.] gi|32397018|emb|CAD72321.1| DNA-binding prot... |
|
| 139 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At5g35970.1 |
score: 245.7 |
e-value: 1.3e-77 |
Identity: 84.89% |
Span: 417bp (66.1%) |
Frame: 2 |
| At5g35970.1 68412.m03892 DNA helicase-related |
| Match: At2g03270.1 |
score: 103.2 |
e-value: 5.9e-26 |
Identity: 46.49% |
Span: 342bp (54.2%) |
Frame: 2 |
| At2g03270.1 68409.m00246 helicase -related |
| Match: At5g47010.1 |
score: 68.94 |
e-value: 2.1e-12 |
Identity: 39.25% |
Span: 312bp (49.4%) |
Frame: 2 |
| At5g47010.1 68412.m05223 RNA helicase, putative similar to type 1 RNA helicase pNORF1 [Homo sapiens] GI:1885356 |
| Match: At5g35970.1 |
score: 62 |
e-value: 1.3e-77 |
Identity: 78.95% |
Span: 114bp (18.1%) |
Frame: 3 |
| At5g35970.1 68412.m03892 DNA helicase-related |
| Match: At1g65780.1 |
score: 58.15 |
e-value: 3.7e-09 |
Identity: 43.18% |
Span: 258bp (40.9%) |
Frame: 2 |
| At1g65780.1 68408.m06844 hypothetical protein shares similarity to C-term of SEN1 GB:AAB63976 GI:172574 [Saccharomyce... |
| Match: At1g08840.1 |
score: 52.76 |
e-value: 8.1e-10 |
Identity: 36.96% |
Span: 273bp (43.3%) |
Frame: 2 |
| At1g08840.1 68408.m00886 hypothetical protein gene overlaps Sp6 end of F7G19 |
| Match: At1g05460.1 |
score: 46.21 |
e-value: 1.5e-05 |
Identity: 36.11% |
Span: 297bp (47.1%) |
Frame: 2 |
| At1g05460.1 68408.m00504 RNA helicase SDE3 identical to RNA helicase SDE3 [Arabidopsis thaliana] GI:13811296 |
| Match: At1g65810.1 |
score: 45.05 |
e-value: 3.3e-05 |
Identity: 37.5% |
Span: 258bp (40.9%) |
Frame: 2 |
| At1g65810.1 68408.m06847 hypothetical protein shares similarity to C-term of SEN1 GB:AAB63976 GI:172574 [Saccharomyce... |
| Match: At4g30100.1 |
score: 44.67 |
e-value: 8.7e-07 |
Identity: 37.35% |
Span: 246bp (39.0%) |
Frame: 2 |
| At4g30100.1 68411.m03906 expressed protein SEN1, a positive effector of tRNA-splicing endonuclease in Saccharomyces c... |
| Match: At5g37150.1 |
score: 44.67 |
e-value: 4e-08 |
Identity: 34.67% |
Span: 225bp (35.7%) |
Frame: 2 |
| At5g37150.1 68412.m04006 sen1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At5g37160.1 |
score: 44.67 |
e-value: 4.3e-05 |
Identity: 33.33% |
Span: 216bp (34.2%) |
Frame: 2 |
| At5g37160.1 68412.m04007 sen1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At5g52090.1 |
score: 44.67 |
e-value: 4.1e-08 |
Identity: 34.67% |
Span: 225bp (35.7%) |
Frame: 2 |
| At5g52090.1 68412.m05842 hypothetical protein contains similarity to nonsense-mediated mRNA decay trans-acting factor |
| Match: At5g37030.1 |
score: 43.9 |
e-value: 7.3e-05 |
Identity: 34.67% |
Span: 225bp (35.7%) |
Frame: 2 |
| At5g37030.1 68412.m03987 SEN1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At1g16800.1 |
score: 43.51 |
e-value: 9.5e-05 |
Identity: 32.98% |
Span: 270bp (42.8%) |
Frame: 2 |
| At1g16800.1 68408.m01821 hypothetical protein |
| Match: At2g19120.1 |
score: 43.51 |
e-value: 1.9e-06 |
Identity: 32.99% |
Span: 279bp (44.2%) |
Frame: 2 |
| At2g19120.1 68409.m02022 DNA2-NAM7 helicase family protein -related |
| Match: At5g37140.1 |
score: 39.66 |
e-value: 1.9e-06 |
Identity: 33.33% |
Span: 225bp (35.7%) |
Frame: 2 |
| At5g37140.1 68412.m04004 sen1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At4g05540.1 |
score: 37.74 |
e-value: 4.1e-07 |
Identity: 31.94% |
Span: 216bp (34.2%) |
Frame: 2 |
| At4g05540.1 68411.m00739 contains similarity to nonsense-mediated mRNA decay trans-acting factors |
| Match: At4g05540.1 |
score: 33.11 |
e-value: 4.1e-07 |
Identity: 37.14% |
Span: 105bp (16.6%) |
Frame: 3 |
| At4g05540.1 68411.m00739 contains similarity to nonsense-mediated mRNA decay trans-acting factors |
| Match: At2g03270.1 |
score: 31.57 |
e-value: 5.9e-26 |
Identity: 50% |
Span: 114bp (18.1%) |
Frame: 3 |
| At2g03270.1 68409.m00246 helicase -related |
| Match: At5g52090.1 |
score: 29.65 |
e-value: 4.1e-08 |
Identity: 37.14% |
Span: 105bp (16.6%) |
Frame: 3 |
| At5g52090.1 68412.m05842 hypothetical protein contains similarity to nonsense-mediated mRNA decay trans-acting factor |
| Match: At5g37150.1 |
score: 29.65 |
e-value: 4e-08 |
Identity: 37.14% |
Span: 105bp (16.6%) |
Frame: 3 |
| At5g37150.1 68412.m04006 sen1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At5g37140.1 |
score: 28.88 |
e-value: 1.9e-06 |
Identity: 40% |
Span: 105bp (16.6%) |
Frame: 3 |
| At5g37140.1 68412.m04004 sen1-related protein SEN1 - Saccharomyces cerevisiae, EMBL:M74589 |
| Match: At1g08840.1 |
score: 27.34 |
e-value: 8.1e-10 |
Identity: 48.65% |
Span: 105bp (16.6%) |
Frame: 3 |
| At1g08840.1 68408.m00886 hypothetical protein gene overlaps Sp6 end of F7G19 |
| Match: At2g19120.1 |
score: 25.02 |
e-value: 1.9e-06 |
Identity: 42.42% |
Span: 96bp (15.2%) |
Frame: 3 |
| At2g19120.1 68409.m02022 DNA2-NAM7 helicase family protein -related |
| Match: At4g30100.1 |
score: 25.02 |
e-value: 8.7e-07 |
Identity: 42.42% |
Span: 96bp (15.2%) |
Frame: 3 |
| At4g30100.1 68411.m03906 expressed protein SEN1, a positive effector of tRNA-splicing endonuclease in Saccharomyces c... |
|
