| arabidopsis/peptide [blastx] | Showing best 19 hits recorded |
| Match: At4G10110.1 |
score: 162 |
e-value: 3e-40 |
Identity: 83.87% |
Span: 279bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr4:6309602-6310805 REVERSE |
| Match: At2G18510.1 |
score: 73.9 |
e-value: 1e-13 |
Identity: 35.96% |
Span: 267bp (42.4%) |
Frame: 2 |
| Symbols: EMB2444 | EMB2444 (EMBRYO DEFECTIVE 2444); RNA binding | chr2:8038636-8040599 REVERSE |
| Match: At1G73530.1 |
score: 53.5 |
e-value: 2e-07 |
Identity: 37.97% |
Span: 237bp (37.6%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr1:27647462-27649047 REVERSE |
| Match: At5G64200.1 |
score: 51.6 |
e-value: 6e-07 |
Identity: 31.2% |
Span: 372bp (59.0%) |
Frame: 2 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At5G64200.2 |
score: 51.6 |
e-value: 6e-07 |
Identity: 31.2% |
Span: 372bp (59.0%) |
Frame: 2 |
| Symbols: ATSC35 | ATSC35 ("Arabidopsis thaliana arginine/serine-rich splicing factor 35, 35 kDa protein"); RNA bindi... |
| Match: At1G49760.1 |
score: 48.5 |
e-value: 5e-06 |
Identity: 27.45% |
Span: 306bp (48.6%) |
Frame: 2 |
| Symbols: PAB8 | PAB8 (POLY(A) BINDING PROTEIN 8); RNA binding / translation initiation factor | chr1:18420408-184234... |
| Match: At3G47120.1 |
score: 47.4 |
e-value: 1e-05 |
Identity: 36.59% |
Span: 246bp (39.0%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein | chr3:17362319-17363754 REVERSE |
| Match: At4G13860.1 |
score: 47 |
e-value: 2e-05 |
Identity: 38.71% |
Span: 186bp (29.5%) |
Frame: 2 |
| glycine-rich RNA-binding protein, putative | chr4:8022597-8023158 FORWARD |
| Match: At5G44200.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 33.85% |
Span: 195bp (31.0%) |
Frame: 2 |
| Symbols: ATCBP20, CBP20 | CBP20 (CAP-BINDING PROTEIN 20); RNA binding | chr5:17819289-17821102 REVERSE |
| Match: At2G23350.1 |
score: 46.6 |
e-value: 2e-05 |
Identity: 26.8% |
Span: 291bp (46.2%) |
Frame: 2 |
| Symbols: PAB4 | PAB4 (POLY(A) BINDING PROTEIN 4); RNA binding / translation initiation factor | chr2:9950289-9953121... |
| Match: At4G16280.2 |
score: 45.8 |
e-value: 3e-05 |
Identity: 30.77% |
Span: 300bp (47.6%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9207180-9214428 REVERSE |
| Match: At4G16280.3 |
score: 45.8 |
e-value: 3e-05 |
Identity: 30.77% |
Span: 300bp (47.6%) |
Frame: 2 |
| Symbols: FCA | FCA (FCA); RNA binding | chr4:9208580-9214428 REVERSE |
| Match: At2G43370.1 |
score: 44.7 |
e-value: 8e-05 |
Identity: 31.94% |
Span: 213bp (33.8%) |
Frame: 2 |
| U1 small nuclear ribonucleoprotein 70 kDa, putative | chr2:18020508-18022453 FORWARD |
| Match: At2G37220.1 |
score: 44.7 |
e-value: 8e-05 |
Identity: 33.87% |
Span: 186bp (29.5%) |
Frame: 2 |
| 29 kDa ribonucleoprotein, chloroplast, putative / RNA-binding protein cp29, putative | chr2:15642059-15643410 REVERSE |
| Match: At5G51300.3 |
score: 44.3 |
e-value: 0.0001 |
Identity: 30.33% |
Span: 366bp (58.1%) |
Frame: 2 |
| nucleic acid binding / nucleotide binding / zinc ion binding | chr5:20867107-20869521 REVERSE |
| Match: At3G52380.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 39.34% |
Span: 183bp (29.0%) |
Frame: 2 |
| Symbols: PDE322, CP33 | CP33 (PIGMENT DEFECTIVE 322); RNA binding | chr3:19432597-19433833 FORWARD |
| Match: At5G51300.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 30.33% |
Span: 366bp (58.1%) |
Frame: 2 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
| Match: At1G71800.1 |
score: 44.3 |
e-value: 0.0001 |
Identity: 39.62% |
Span: 159bp (25.2%) |
Frame: 2 |
| cleavage stimulation factor, putative | chr1:27003268-27005512 FORWARD |
| Match: At5G51300.2 |
score: 44.3 |
e-value: 0.0001 |
Identity: 30.33% |
Span: 366bp (58.1%) |
Frame: 2 |
| splicing factor-related | chr5:20867107-20869521 REVERSE |
|
| 114 lower scoring hits censored -- only 19 best hits are stored. |
| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|86156022|gb|ABC86742.1| |
score: 179 |
e-value: 1e-43 |
Identity: 66.44% |
Span: 420bp (66.7%) |
Frame: 2 |
| RNA recognition motif-containing protein [Vitis pseudoreticulata] |
| Match: gi|30681329|ref|NP_192749.2| |
score: 162 |
e-value: 2e-38 |
Identity: 83.87% |
Span: 279bp (44.3%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi26453246|dbj|BAC43696.1| unknown protein [Ar... |
| Match: gi|50931451|ref|XP_475253.1| |
score: 153 |
e-value: 9e-36 |
Identity: 67.89% |
Span: 327bp (51.9%) |
Frame: 2 |
| gi|50931451|ref|XP_475253.1| putative galactosyltransferase [Oryza sativa (japonica cultivar-group)] >gi|46391132|gb|... |
| Match: gi|34907328|ref|NP_915011.1| |
score: 150 |
e-value: 7e-35 |
Identity: 67.57% |
Span: 324bp (51.4%) |
Frame: 2 |
| gi|34907328|ref|NP_915011.1| P0698A10.26 [Oryza sativa (japonica cultivar-group)] gi|20804771|dbj|BAB92456.1| P0698A1... |
| Match: gi|56784854|dbj|BAD82094.1| |
score: 150 |
e-value: 7e-35 |
Identity: 67.57% |
Span: 324bp (51.4%) |
Frame: 2 |
| galactosyltransferase-like protein [Oryza sativa Japonica Group] |
| Match: gi|7267707|emb|CAB78134.1| |
score: 122 |
e-value: 3e-26 |
Identity: 88.06% |
Span: 201bp (31.9%) |
Frame: 2 |
| gi|7267707|emb|CAB78134.1| putative protein [Arabidopsis thaliana] >gi|4538975|emb|CAB39763.1| putative protein [Arab... |
| Match: gi|71021191|ref|XP_760826.1| |
score: 79.3 |
e-value: 2e-13 |
Identity: 37.63% |
Span: 279bp (44.3%) |
Frame: 2 |
| gi|71021191|ref|XP_760826.1| hypothetical protein UM04679.1 [Ustilago maydis 521] >gi|46100200|gb|EAK85433.1| hypothe... |
| Match: gi|37535012|ref|NP_921808.1| |
score: 79.3 |
e-value: 2e-13 |
Identity: 38.2% |
Span: 267bp (42.4%) |
Frame: 2 |
| gi|37535012|ref|NP_921808.1| putative spliceosomal protein [Oryza sativa (japonica cultivar-group)] gi|31432465|gb|AA... |
| Match: gi|89290252|gb|EAR88240.1| |
score: 79 |
e-value: 3e-13 |
Identity: 42.35% |
Span: 255bp (40.5%) |
Frame: 2 |
| Splicing |
| Match: gi|65302503|emb|CAI74610.1| |
score: 77.4 |
e-value: 8e-13 |
Identity: 44.71% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|65302503|emb|CAI74610.1| splicing factor 3b subunit 4, putative [Theileria annulata] |
| Match: gi|67540662|ref|XP_664105.1| |
score: 77.4 |
e-value: 8e-13 |
Identity: 36.05% |
Span: 258bp (41.0%) |
Frame: 2 |
| gi|67540662|ref|XP_664105.1| hypothetical protein AN6501.2 [Aspergillus nidulans FGSC A4] >gi|40738651|gb|EAA57841.1|... |
| Match: gi|71030596|ref|XP_764940.1| |
score: 76.6 |
e-value: 1e-12 |
Identity: 43.53% |
Span: 255bp (40.5%) |
Frame: 2 |
| spliceosome |
| Match: gi|70984076|ref|XP_747559.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 36.05% |
Span: 258bp (41.0%) |
Frame: 2 |
| splicing |
| Match: gi|83771650|dbj|BAE61780.1| |
score: 76.3 |
e-value: 2e-12 |
Identity: 36.05% |
Span: 258bp (41.0%) |
Frame: 2 |
| unnamed |
| Match: gi|50553138|ref|XP_503979.1| |
score: 74.3 |
e-value: 7e-12 |
Identity: 34.88% |
Span: 258bp (41.0%) |
Frame: 2 |
| gi|50553138|ref|XP_503979.1| hypothetical protein [Yarrowia lipolytica] >gi|49649848|emb|CAG79572.1| unnamed protein ... |
| Match: gi|14334958|gb|AAK59656.1| |
score: 73.9 |
e-value: 9e-12 |
Identity: 35.96% |
Span: 267bp (42.4%) |
Frame: 2 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|15224186|ref|NP_179441.1| |
score: 73.9 |
e-value: 9e-12 |
Identity: 35.96% |
Span: 267bp (42.4%) |
Frame: 2 |
| emb2444 (embryo defective 2444); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi42... |
| Match: gi|21593441|gb|AAM65408.1| |
score: 73.9 |
e-value: 9e-12 |
Identity: 35.96% |
Span: 267bp (42.4%) |
Frame: 2 |
| putative spliceosome associated protein [Arabidopsis thaliana] |
| Match: gi|90307615|gb|EAS37246.1| |
score: 73.6 |
e-value: 1e-11 |
Identity: 37.21% |
Span: 258bp (41.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|67479901|ref|XP_655332.1| |
score: 73.2 |
e-value: 1e-11 |
Identity: 41.25% |
Span: 240bp (38.1%) |
Frame: 2 |
| gi|67479901|ref|XP_655332.1| RNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS] >gi|56472460|gb|EAL49944... |
| Match: gi|1002380|gb|AAC47514.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 40.26% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein |
| Match: gi|39587756|emb|CAE67774.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 40.26% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|39587756|emb|CAE67774.1| Hypothetical protein CBG13349 [Caenorhabditis briggsae] |
| Match: gi|111062319|gb|EAT83439.1| |
score: 72.4 |
e-value: 3e-11 |
Identity: 37.11% |
Span: 291bp (46.2%) |
Frame: 2 |
| hypothetical |
| Match: gi|50511896|emb|CAB60993.2| |
score: 72.4 |
e-value: 3e-11 |
Identity: 40.26% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|50511896|emb|CAB60993.2| Hypothetical protein C08B11.5 [Caenorhabditis elegans] >gi|55977846|sp|Q09442|YP85_CAEEL ... |
| Match: gi|94399678|ref|XP_998615.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|50794775|ref|XP_423721.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|50794775|ref|XP_423721.1| PREDICTED: similar to Splicing factor 3b, subunit 4 [Gallus gallus] |
| Match: gi|76612833|ref|XP_582525.2| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|76612833|ref|XP_582525.2| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) isoform 2 [Bos taurus] |
| Match: gi|76612837|ref|XP_885279.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|76612837|ref|XP_885279.1| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) isoform 8 [Bos taurus] |
| Match: gi|50604232|gb|AAH77458.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis] |
| Match: gi|55588114|ref|XP_513768.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|55588114|ref|XP_513768.1| PREDICTED: hypothetical protein XP_513768 [Pan troglodytes] |
| Match: gi|76612831|ref|XP_885204.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|76612831|ref|XP_885204.1| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) isoform 6 [Bos taurus] |
| Match: gi|37537250|gb|AAH24418.3| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| Splicing |
| Match: gi|28374170|gb|AAH45264.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis] |
| Match: gi|73981537|ref|XP_540295.2| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|73981537|ref|XP_540295.2| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) [Canis familiaris] |
| Match: gi|68534615|gb|AAH99272.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 35.96% |
Span: 267bp (42.4%) |
Frame: 2 |
| gi|68534615|gb|AAH99272.1| Unknown (protein for MGC:116464) [Xenopus laevis] |
| Match: gi|75948207|gb|AAI05267.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|75948207|gb|AAI05267.1| LOC506123 protein [Bos taurus] |
| Match: gi|5032069|ref|NP_005841.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|5032069|ref|NP_005841.1| splicing factor 3b, subunit 4; spliceosome-associated protein (U2 snRNP); spliceosomal pr... |
| Match: gi|45768679|gb|AAH67655.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio] >gi|34193906|gb|AAH56532.1| Splicing factor 3b... |
| Match: gi|38512254|gb|AAH61357.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|38512254|gb|AAH61357.1| Spx-prov protein [Xenopus tropicalis] |
| Match: gi|76612835|ref|XP_885254.1| |
score: 70.9 |
e-value: 7e-11 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|76612835|ref|XP_885254.1| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) isoform 7 [Bos taurus] |
| Match: gi|83753632|pdb|1X5U|A |
score: 70.5 |
e-value: 1e-10 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| Chain |
| Match: gi|62898205|dbj|BAD97042.1| |
score: 70.5 |
e-value: 1e-10 |
Identity: 38.96% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens] |
| Match: gi|72010597|ref|XP_784135.1| |
score: 70.1 |
e-value: 1e-10 |
Identity: 37.65% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|72010597|ref|XP_784135.1| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) [Strongylocentrotus purp... |
| Match: gi|12038984|emb|CAC19730.1| |
score: 69.7 |
e-value: 2e-10 |
Identity: 35.23% |
Span: 264bp (41.9%) |
Frame: 2 |
| gi|12038984|emb|CAC19730.1| sap49 [Schizosaccharomyces pombe] |
| Match: gi|63054583|ref|NP_594001.2| |
score: 69.7 |
e-value: 2e-10 |
Identity: 35.23% |
Span: 264bp (41.9%) |
Frame: 2 |
| gi|63054583|ref|NP_594001.2| RNA-binding protein [Schizosaccharomyces pombe 972h-] >gi|26399889|sp|O14102|SAP49_SCHPO... |
| Match: gi|54643408|gb|EAL32152.1| |
score: 68.9 |
e-value: 3e-10 |
Identity: 35.06% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|54643408|gb|EAL32152.1| GA17684-PA [Drosophila pseudoobscura] |
| Match: gi|108869713|gb|EAT33938.1| |
score: 68.9 |
e-value: 3e-10 |
Identity: 36.36% |
Span: 231bp (36.7%) |
Frame: 2 |
| spliceosome |
| Match: gi|109706833|gb|ABG43003.1| |
score: 68.9 |
e-value: 3e-10 |
Identity: 36.36% |
Span: 231bp (36.7%) |
Frame: 2 |
| spliceosomal |
| Match: gi|52547949|gb|AAM28203.2| |
score: 68.9 |
e-value: 3e-10 |
Identity: 37.66% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio] |
| Match: gi|56755563|gb|AAW25960.1| |
score: 68.6 |
e-value: 4e-10 |
Identity: 36.36% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum] |
| Match: gi|57230297|gb|AAW46698.1| |
score: 68.2 |
e-value: 5e-10 |
Identity: 35.29% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|57230297|gb|AAW46698.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] >gi|5025623... |
| Match: gi|46125929|ref|XP_387518.1| |
score: 68.2 |
e-value: 5e-10 |
Identity: 33.72% |
Span: 258bp (41.0%) |
Frame: 2 |
| gi|46125929|ref|XP_387518.1| hypothetical protein FG07342.1 [Gibberella zeae PH-1] >gi|42553315|gb|EAA76158.1| hypoth... |
| Match: gi|55233804|gb|EAA00839.2| |
score: 68.2 |
e-value: 5e-10 |
Identity: 35.06% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|55233804|gb|EAA00839.2| ENSANGP00000011587 [Anopheles gambiae str. PEST] >gi|58395925|ref|XP_321584.2| ENSANGP0000... |
| Match: gi|48097884|ref|XP_393914.1| |
score: 67.8 |
e-value: 6e-10 |
Identity: 33.77% |
Span: 231bp (36.7%) |
Frame: 2 |
| PREDICTED: similar to splicing factor 3b, subunit 4 [Apis mellifera] |
| Match: gi|45185171|ref|NP_982888.1| |
score: 67.8 |
e-value: 6e-10 |
Identity: 38.75% |
Span: 240bp (38.1%) |
Frame: 2 |
| gi|45185171|ref|NP_982888.1| ABL059Wp [Eremothecium gossypii] >gi|44980807|gb|AAS50712.1| ABL059Wp [Eremothecium goss... |
| Match: gi|39943924|ref|XP_361499.1| |
score: 67.4 |
e-value: 8e-10 |
Identity: 32.97% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|39943924|ref|XP_361499.1| hypothetical protein MG03973.4 [Magnaporthe grisea 70-15] |
| Match: gi|68051249|gb|AAY84889.1| |
score: 67.4 |
e-value: 8e-10 |
Identity: 33.77% |
Span: 231bp (36.7%) |
Frame: 2 |
| RE50839p |
| Match: gi|91079430|ref|XP_968120.1| |
score: 65.9 |
e-value: 2e-09 |
Identity: 33.77% |
Span: 231bp (36.7%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|49526988|emb|CAG60615.1| |
score: 65.5 |
e-value: 3e-09 |
Identity: 36.14% |
Span: 249bp (39.5%) |
Frame: 2 |
| unnamed |
| Match: gi|62859435|ref|NP_001016096.1| |
score: 64.7 |
e-value: 5e-09 |
Identity: 38.46% |
Span: 261bp (41.4%) |
Frame: 2 |
| gi|62859435|ref|NP_001016096.1| RNA binding motif protein 7 [Xenopus tropicalis] |
| Match: gi|73979514|ref|XP_848973.1| |
score: 62.8 |
e-value: 2e-08 |
Identity: 34.62% |
Span: 234bp (37.1%) |
Frame: 2 |
| gi|73979514|ref|XP_848973.1| PREDICTED: similar to splicing factor 3b, subunit 4 (predicted) [Canis familiaris] |
| Match: gi|32766620|gb|AAH54991.1| |
score: 62.4 |
e-value: 3e-08 |
Identity: 37.63% |
Span: 267bp (42.4%) |
Frame: 2 |
| gi|32766620|gb|AAH54991.1| Rbm7-prov protein [Xenopus laevis] |
| Match: gi|20987468|gb|AAH30196.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 36.84% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|20987468|gb|AAH30196.1| RBM11 protein [Homo sapiens] >gi|7768750|dbj|BAA95545.1| RBM11 [Homo sapiens] >gi|9978670|... |
| Match: gi|109065778|ref|XP_001083260.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 36.84% |
Span: 273bp (43.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|11595719|emb|CAC18197.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 30% |
Span: 270bp (42.9%) |
Frame: 2 |
| gi|11595719|emb|CAC18197.1| probable spliceosome-associated protein SAP-49 [Neurospora crassa] >gi|32405818|ref|XP_32... |
| Match: gi|6324895|ref|NP_014964.1| |
score: 61.6 |
e-value: 4e-08 |
Identity: 38.36% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|6324895|ref|NP_014964.1| Human SAP Homolog 49. A yeast homolog of a human spliceosome associated protein (SAP) cal... |
| Match: gi|57108733|ref|XP_535558.1| |
score: 60.8 |
e-value: 8e-08 |
Identity: 36.84% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|57108733|ref|XP_535558.1| PREDICTED: similar to Putative RNA-binding protein 11 (RNA binding motif protein 11) [Ca... |
| Match: gi|88178443|gb|EAQ85911.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 30.23% |
Span: 258bp (41.0%) |
Frame: 2 |
| hypothetical |
| Match: gi|47682782|gb|AAH70262.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|47682782|gb|AAH70262.1| Unknown (protein for MGC:88249) [Homo sapiens] |
| Match: gi|55732787|emb|CAH93091.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|55732787|emb|CAH93091.1| hypothetical protein [Pongo pygmaeus] |
| Match: gi|9994185|ref|NP_057174.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|9994185|ref|NP_057174.1| RNA binding motif protein 7 [Homo sapiens] gi|9978697|sp|Q9Y580|RBM7_HUMAN Putative RNA-b... |
| Match: gi|7023641|dbj|BAA92036.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|7023641|dbj|BAA92036.1| unnamed protein product [Homo sapiens] |
| Match: gi|74267635|gb|AAI02761.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 36.84% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|74267635|gb|AAI02761.1| Unknown (protein for MGC:127108) [Bos taurus] |
| Match: gi|62089092|dbj|BAD92990.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|62089092|dbj|BAD92990.1| Hypothetical protein FLJ11153 variant [Homo sapiens] |
| Match: gi|109108731|ref|XP_001087792.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|109108729|ref|XP_001088040.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|55636999|ref|XP_508767.1| |
score: 60.5 |
e-value: 1e-07 |
Identity: 41.1% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|55636999|ref|XP_508767.1| PREDICTED: similar to Putative RNA-binding protein 7 (RNA binding motif protein 7) [Pan ... |
| Match: gi|109492792|ref|XP_221731.4| |
score: 59.7 |
e-value: 2e-07 |
Identity: 34.74% |
Span: 273bp (43.3%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|26333183|dbj|BAC30309.1| |
score: 59.7 |
e-value: 2e-07 |
Identity: 34.74% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|26333183|dbj|BAC30309.1| unnamed protein product [Mus musculus] |
| Match: gi|39930581|ref|NP_938044.1| |
score: 59.7 |
e-value: 2e-07 |
Identity: 34.74% |
Span: 273bp (43.3%) |
Frame: 2 |
| gi|39930581|ref|NP_938044.1| RNA binding motif protein 11 [Mus musculus] >gi|29747748|gb|AAH50779.1| Rbm11 protein [M... |
| Match: gi|53130199|emb|CAG31450.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 35.48% |
Span: 276bp (43.8%) |
Frame: 2 |
| gi|53130199|emb|CAG31450.1| hypothetical protein [Gallus gallus] >gi|57530481|ref|NP_001006318.1| RNA binding motif p... |
| Match: gi|75775082|gb|AAI04519.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 31.82% |
Span: 288bp (45.7%) |
Frame: 2 |
| gi|75775082|gb|AAI04519.1| MGC129092 protein [Bos taurus] >gi|77735925|ref|NP_001029659.1| hypothetical protein LOC51... |
| Match: gi|66518019|ref|XP_623848.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 37.5% |
Span: 264bp (41.9%) |
Frame: 2 |
| PREDICTED: similar to Peptidyl-prolyl cis-trans isomerase E (PPIase E) (Rotamase E) (Cyclophilin E) (Cyclophilin 33) ... |
| Match: gi|50305767|ref|XP_452844.1| |
score: 59.3 |
e-value: 2e-07 |
Identity: 39.47% |
Span: 219bp (34.8%) |
Frame: 2 |
| gi|50305767|ref|XP_452844.1| unnamed protein product [Kluyveromyces lactis] >gi|49641977|emb|CAH01695.1| unnamed prot... |
| Match: gi|75756244|gb|ABA27139.1| |
score: 58.5 |
e-value: 4e-07 |
Identity: 29% |
Span: 300bp (47.6%) |
Frame: 2 |
| gi|75756244|gb|ABA27139.1| mRNA splicing factor 3b4 [Bigelowiella natans] |
| Match: gi|23497260|gb|AAN36806.1| |
score: 57.8 |
e-value: 6e-07 |
Identity: 32.94% |
Span: 255bp (40.5%) |
Frame: 2 |
| spliceosome-associated |
| Match: gi|68073863|ref|XP_678846.1| |
score: 57 |
e-value: 1e-06 |
Identity: 34.12% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|68073863|ref|XP_678846.1| spliceosome-associated protein, putative [Plasmodium berghei] >gi|56499442|emb|CAH97651.... |
| Match: gi|70948340|ref|XP_743694.1| |
score: 57 |
e-value: 1e-06 |
Identity: 34.12% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|70948340|ref|XP_743694.1| spliceosome-associated protein, putative [Plasmodium chabaudi] >gi|56523315|emb|CAH77774... |
| Match: gi|82914993|ref|XP_728927.1| |
score: 57 |
e-value: 1e-06 |
Identity: 34.12% |
Span: 255bp (40.5%) |
Frame: 2 |
| splicing |
| Match: gi|70935983|ref|XP_739002.1| |
score: 57 |
e-value: 1e-06 |
Identity: 34.12% |
Span: 255bp (40.5%) |
Frame: 2 |
| gi|70935983|ref|XP_739002.1| hypothetical protein PC302382.00.0 [Plasmodium chabaudi] >gi|56515660|emb|CAH87238.1| hy... |
| Match: gi|41351458|gb|AAH65641.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 36.71% |
Span: 237bp (37.6%) |
Frame: 2 |
| gi|41351458|gb|AAH65641.1| Zgc:77304 protein [Danio rerio] |
| Match: gi|91094253|ref|XP_969008.1| |
score: 56.6 |
e-value: 1e-06 |
Identity: 40% |
Span: 240bp (38.1%) |
Frame: 2 |
| PREDICTED: |
| Match: gi|1279382|emb|CAA65831.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 27.08% |
Span: 231bp (36.7%) |
Frame: 2 |
| gi|1279382|emb|CAA65831.1| spliceosomal protein [Drosophila melanogaster] |
| Match: gi|20129123|ref|NP_608497.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 31.07% |
Span: 306bp (48.6%) |
Frame: 2 |
| gi|20129123|ref|NP_608497.1| CG11454-PA [Drosophila melanogaster] gi|7296251|gb|AAF51542.1| CG11454-PA [Drosophila me... |
| Match: gi|60677845|gb|AAX33429.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 31.07% |
Span: 306bp (48.6%) |
Frame: 2 |
| gi|60677845|gb|AAX33429.1| RE36241p [Drosophila melanogaster] |
| Match: gi|16769726|gb|AAL29082.1| |
score: 55.8 |
e-value: 2e-06 |
Identity: 31.07% |
Span: 306bp (48.6%) |
Frame: 2 |
| gi|16769726|gb|AAL29082.1| LP01585p [Drosophila melanogaster] |
| Match: gi|54645433|gb|EAL34172.1| |
score: 55.5 |
e-value: 3e-06 |
Identity: 33.33% |
Span: 243bp (38.6%) |
Frame: 2 |
| gi|54645433|gb|EAL34172.1| GA11013-PA [Drosophila pseudoobscura] |
| Match: gi|13560783|gb|AAK30205.1| |
score: 55.1 |
e-value: 4e-06 |
Identity: 32.5% |
Span: 240bp (38.1%) |
Frame: 2 |
| gi|13560783|gb|AAK30205.1| poly(A)-binding protein [Daucus carota] |
| Match: gi|111600453|gb|AAI19039.1| |
score: 55.1 |
e-value: 4e-06 |
Identity: 38.36% |
Span: 219bp (34.8%) |
Frame: 2 |
| RNA |
| Match: gi|71021191|ref|XP_760826.1| |
score: 51.6 |
e-value: 5e-05 |
Identity: 36.59% |
Span: 240bp (38.1%) |
Frame: 2 |
| gi|71021191|ref|XP_760826.1| hypothetical protein UM04679.1 [Ustilago maydis 521] >gi|46100200|gb|EAK85433.1| hypothe... |
|
| 201 lower scoring hits censored -- only 100 best hits are stored. |
