| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224124196|ref|XP_002319269.1| |
score: 175 |
e-value: 3e-42 |
Identity: 94.81% |
Span: 402bp (64.0%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi222857645|gb|EEE95192.1| histone 2 [Populus trichocarpa] |
| Match: gi|224115182|ref|XP_002316965.1| |
score: 174 |
e-value: 6e-42 |
Identity: 95.45% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone H2 [Populus trichocarpa] >gi222860030|gb|EEE97577.1| histone H2 [Populus trichocarpa] |
| Match: gi|118484619|gb|ABK94182.1| |
score: 174 |
e-value: 6e-42 |
Identity: 95.45% |
Span: 396bp (63.1%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|118485039|gb|ABK94384.1| |
score: 173 |
e-value: 1e-41 |
Identity: 95.49% |
Span: 396bp (63.1%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|15223708|ref|NP_175517.1| |
score: 172 |
e-value: 2e-41 |
Identity: 93.94% |
Span: 396bp (63.1%) |
Frame: 1 |
| HTA10; DNA binding [Arabidopsis thaliana] >gi75308805|sp|Q9C681.1|H2A1_ARATH RecName: Full=Probable histone H2A.1; Al... |
| Match: gi|288187167|gb|ADC42106.1| |
score: 171 |
e-value: 6e-41 |
Identity: 93.28% |
Span: 402bp (64.0%) |
Frame: 1 |
| H2A [Cloning vector pENTR/Zeo-H2A] |
| Match: gi|255628947|gb|ACU14818.1| |
score: 170 |
e-value: 1e-40 |
Identity: 94.7% |
Span: 396bp (63.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|255637355|gb|ACU19007.1| |
score: 169 |
e-value: 1e-40 |
Identity: 94.03% |
Span: 396bp (63.1%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|15239697|ref|NP_200275.1| |
score: 169 |
e-value: 1e-40 |
Identity: 95.42% |
Span: 393bp (62.6%) |
Frame: 1 |
| RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding [Arabidopsis thaliana] >gi75311051|sp|Q9LD28.1|H2A6_A... |
| Match: gi|15237024|ref|NP_194453.1| |
score: 169 |
e-value: 1e-40 |
Identity: 94.7% |
Span: 396bp (63.1%) |
Frame: 1 |
| HTA2 (histone H2A); DNA binding [Arabidopsis thaliana] >gi75279005|sp|O81826.1|H2A3_ARATH RecName: Full=Probable hist... |
| Match: gi|225461156|ref|XP_002282795.1| |
score: 169 |
e-value: 2e-40 |
Identity: 94.7% |
Span: 396bp (63.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270231165|emb|CBI20492.1| unnamed protein product [Vitis vinifera] |
| Match: gi|21617982|gb|AAM67032.1| |
score: 166 |
e-value: 1e-39 |
Identity: 93.94% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone H2A-like protein [Arabidopsis thaliana] |
| Match: gi|115476496|ref|NP_001061844.1| |
score: 163 |
e-value: 1e-38 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Os08g0427700 [Oryza sativa (japonica cultivar-group)] >gi75147390|sp|Q84NJ4.1|H2A3_ORYSJ RecName: Full=Probable histo... |
| Match: gi|15232330|ref|NP_188703.1| |
score: 163 |
e-value: 1e-38 |
Identity: 90.15% |
Span: 396bp (63.1%) |
Frame: 1 |
| HTA13; DNA binding [Arabidopsis thaliana] >gi75311179|sp|Q9LHQ5.1|H2A2_ARATH RecName: Full=Probable histone H2A.2; Al... |
| Match: gi|225469123|ref|XP_002272843.1| |
score: 161 |
e-value: 5e-38 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270247936|emb|CBI33257.1| unnamed protein product [Vitis vinifera] |
| Match: gi|225469181|ref|XP_002275483.1| |
score: 161 |
e-value: 5e-38 |
Identity: 89.63% |
Span: 396bp (63.1%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270256138|emb|CBI38491.1| unnamed protein product [Vitis vinifera] |
| Match: gi|115472633|ref|NP_001059915.1| |
score: 161 |
e-value: 5e-38 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Os07g0545400 [Oryza sativa (japonica cultivar-group)] >gi75294328|sp|Q6ZL42.1|H2A2_ORYSJ RecName: Full=Probable histo... |
| Match: gi|255563635|ref|XP_002522819.1| |
score: 160 |
e-value: 1e-37 |
Identity: 88.72% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223537903|gb|EEF39517.1| histone h2a, putative [Ricinus communis] |
| Match: gi|75282511|sp|Q43312.3|H2A7_WHEAT |
score: 160 |
e-value: 1e-37 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| RecName: Full=Protein H2A.7; AltName: Full=wcH2A-4; AltName: Full=wcH2A-10 >gi536892|dbj|BAA07278.1| protein H2A [Tri... |
| Match: gi|242045906|ref|XP_002460824.1| |
score: 157 |
e-value: 7e-37 |
Identity: 91.47% |
Span: 387bp (61.6%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_02g035650 [Sorghum bicolor] >gi194700332|gb|ACF84250.1| unknown [Zea mays] >gi|241924... |
| Match: gi|255555071|ref|XP_002518573.1| |
score: 157 |
e-value: 1e-36 |
Identity: 87.88% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223542418|gb|EEF43960.1| histone h2a, putative [Ricinus communis] |
| Match: gi|212723398|ref|NP_001132837.1| |
score: 157 |
e-value: 1e-36 |
Identity: 91.47% |
Span: 387bp (61.6%) |
Frame: 1 |
| hypothetical protein LOC100194327 [Zea mays] >gi194695530|gb|ACF81849.1| unknown [Zea mays] >gi|195606436|gb|ACG25048... |
| Match: gi|42565387|gb|AAS20970.1| |
score: 156 |
e-value: 1e-36 |
Identity: 92.59% |
Span: 324bp (51.6%) |
Frame: 1 |
| histone H2A [Hyacinthus orientalis] |
| Match: gi|2317760|gb|AAB66346.1| |
score: 155 |
e-value: 4e-36 |
Identity: 80.92% |
Span: 390bp (62.1%) |
Frame: 1 |
| H2A homolog [Pinus taeda] |
| Match: gi|115472631|ref|NP_001059914.1| |
score: 154 |
e-value: 8e-36 |
Identity: 87.12% |
Span: 396bp (63.1%) |
Frame: 1 |
| Os07g0545300 [Oryza sativa (japonica cultivar-group)] >gi75294329|sp|Q6ZL43.1|H2A1_ORYSJ RecName: Full=Probable histo... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
| Match: At1G51060.1 |
score: 172 |
e-value: 1e-43 |
Identity: 93.94% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone H2A, putative | chr1:18930616-18931111 FORWARD |
| Match: At5G54640.1 |
score: 169 |
e-value: 9e-43 |
Identity: 95.42% |
Span: 393bp (62.6%) |
Frame: 1 |
| Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22213766-22214505 FORWARD |
| Match: At4G27230.1 |
score: 169 |
e-value: 9e-43 |
Identity: 94.7% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone H2A, putative | chr4:13637521-13638331 REVERSE |
| Match: At3G20670.1 |
score: 163 |
e-value: 7e-41 |
Identity: 90.15% |
Span: 396bp (63.1%) |
Frame: 1 |
| histone H2A, putative | chr3:7229478-7229969 FORWARD |
| Match: At1G54690.1 |
score: 145 |
e-value: 2e-35 |
Identity: 92.93% |
Span: 297bp (47.3%) |
Frame: 1 |
| histone H2A, putative | chr1:20418274-20418873 REVERSE |
| Match: At1G08880.1 |
score: 144 |
e-value: 5e-35 |
Identity: 91.92% |
Span: 297bp (47.3%) |
Frame: 1 |
| histone H2A, putative | chr1:2847147-2847679 REVERSE |
| Match: At5G59870.1 |
score: 129 |
e-value: 2e-30 |
Identity: 76.64% |
Span: 321bp (51.1%) |
Frame: 1 |
| histone H2A, putative | chr5:24132831-24133370 REVERSE |
| Match: At5G27670.1 |
score: 120 |
e-value: 6e-28 |
Identity: 76.42% |
Span: 318bp (50.6%) |
Frame: 1 |
| histone H2A, putative | chr5:9792810-9793368 REVERSE |
| Match: At5G02560.1 |
score: 118 |
e-value: 3e-27 |
Identity: 78.57% |
Span: 294bp (46.8%) |
Frame: 1 |
| histone H2A, putative | chr5:575435-576454 FORWARD |
| Match: At3G54560.1 |
score: 75.1 |
e-value: 3e-14 |
Identity: 61.62% |
Span: 294bp (46.8%) |
Frame: 1 |
| histone H2A.F/Z | chr3:20207510-20208444 FORWARD |
| Match: At1G52740.1 |
score: 75.1 |
e-value: 3e-14 |
Identity: 62.89% |
Span: 288bp (45.9%) |
Frame: 1 |
| histone H2A, putative | chr1:19649077-19649889 FORWARD |
| Match: At2G38810.2 |
score: 73.9 |
e-value: 7e-14 |
Identity: 61.62% |
Span: 294bp (46.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.3 |
score: 73.9 |
e-value: 7e-14 |
Identity: 61.62% |
Span: 294bp (46.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.1 |
score: 73.9 |
e-value: 7e-14 |
Identity: 61.62% |
Span: 294bp (46.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9C681 |
score: 172 |
e-value: 1e-42 |
Identity: 93.94% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.1 OS=Arabidopsis thaliana GN=At1g51060 PE=1 SV=1 |
| Match: Q9LD28 |
score: 169 |
e-value: 1e-41 |
Identity: 95.42% |
Span: 393bp (62.6%) |
Frame: 1 |
| Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1 |
| Match: O81826 |
score: 169 |
e-value: 1e-41 |
Identity: 94.7% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1 |
| Match: Q84NJ4 |
score: 163 |
e-value: 7e-40 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1 |
| Match: A2YVE5 |
score: 163 |
e-value: 7e-40 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1 |
| Match: Q9LHQ5 |
score: 163 |
e-value: 7e-40 |
Identity: 90.15% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1 |
| Match: Q6ZL42 |
score: 161 |
e-value: 3e-39 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1 |
| Match: A2YMC6 |
score: 161 |
e-value: 3e-39 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1 |
| Match: Q43312 |
score: 160 |
e-value: 8e-39 |
Identity: 90.91% |
Span: 396bp (63.1%) |
Frame: 1 |
| Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3 |
| Match: Q6ZL43 |
score: 154 |
e-value: 6e-37 |
Identity: 87.12% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.1 OS=Oryza sativa subsp. japonica GN=Os07g0545300 PE=2 SV=1 |
| Match: A2YMC5 |
score: 154 |
e-value: 6e-37 |
Identity: 87.12% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2 |
| Match: A2ZK26 |
score: 153 |
e-value: 7e-37 |
Identity: 86.36% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1 |
| Match: Q2QS71 |
score: 153 |
e-value: 7e-37 |
Identity: 87.12% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.7 OS=Oryza sativa subsp. japonica GN=Os12g0438000 PE=2 SV=1 |
| Match: A2ZK29 |
score: 153 |
e-value: 7e-37 |
Identity: 87.12% |
Span: 396bp (63.1%) |
Frame: 1 |
| Probable histone H2A.7 OS=Oryza sativa subsp. indica GN=OsI_036922 PE=3 SV=1 |
| Match: Q43208 |
score: 151 |
e-value: 4e-36 |
Identity: 86.36% |
Span: 396bp (63.1%) |
Frame: 1 |
| Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3 |
| Match: P35063 |
score: 145 |
e-value: 2e-34 |
Identity: 93.94% |
Span: 297bp (47.3%) |
Frame: 1 |
| Histone H2AX OS=Picea abies PE=2 SV=1 |
| Match: Q9S9K7 |
score: 145 |
e-value: 3e-34 |
Identity: 92.93% |
Span: 297bp (47.3%) |
Frame: 1 |
| Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1 |
| Match: O04848 |
score: 144 |
e-value: 6e-34 |
Identity: 91.92% |
Span: 297bp (47.3%) |
Frame: 1 |
| Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1 |
| Match: O65759 |
score: 143 |
e-value: 1e-33 |
Identity: 91.92% |
Span: 297bp (47.3%) |
Frame: 1 |
| Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1 |
| Match: P50567 |
score: 139 |
e-value: 2e-32 |
Identity: 83.61% |
Span: 366bp (58.3%) |
Frame: 1 |
| Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1 |
| Match: P16866 |
score: 139 |
e-value: 2e-32 |
Identity: 85.25% |
Span: 366bp (58.3%) |
Frame: 1 |
| Histone H2A-IV OS=Volvox carteri PE=3 SV=1 |
| Match: P16865 |
score: 139 |
e-value: 2e-32 |
Identity: 84.43% |
Span: 366bp (58.3%) |
Frame: 1 |
| Histone H2A-III OS=Volvox carteri PE=3 SV=1 |
| Match: Q2QPG9 |
score: 138 |
e-value: 3e-32 |
Identity: 89.9% |
Span: 297bp (47.3%) |
Frame: 1 |
| Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1 |
| Match: A2ZL69 |
score: 138 |
e-value: 3e-32 |
Identity: 89.9% |
Span: 297bp (47.3%) |
Frame: 1 |
| Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1 |
| Match: Q8LLP5 |
score: 136 |
e-value: 1e-31 |
Identity: 88.89% |
Span: 297bp (47.3%) |
Frame: 1 |
| Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1 |
|
| 211 lower scoring hits censored -- only 25 best hits are stored. |
