| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224123274|ref|XP_002319038.1| |
score: 201 |
e-value: 6e-50 |
Identity: 92.31% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi222857414|gb|EEE94961.1| histone 2 [Populus trichocarpa] |
| Match: gi|255625587|gb|ACU13138.1| |
score: 199 |
e-value: 2e-49 |
Identity: 92.2% |
Span: 423bp (67.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|224131422|ref|XP_002328535.1| |
score: 199 |
e-value: 2e-49 |
Identity: 92.31% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi222838250|gb|EEE76615.1| histone 2 [Populus trichocarpa] |
| Match: gi|225451096|ref|XP_002265878.1| |
score: 196 |
e-value: 1e-48 |
Identity: 92.09% |
Span: 417bp (66.5%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147815277|emb|CAN70026.1| hypothetical protein [Vitis vinifera] |
| Match: gi|255542492|ref|XP_002512309.1| |
score: 195 |
e-value: 2e-48 |
Identity: 90.78% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223548270|gb|EEF49761.1| histone h2a, putative [Ricinus communis] |
| Match: gi|255559382|ref|XP_002520711.1| |
score: 195 |
e-value: 2e-48 |
Identity: 90.65% |
Span: 417bp (66.5%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223540096|gb|EEF41673.1| histone h2a, putative [Ricinus communis] |
| Match: gi|124360158|gb|ABN08174.1| |
score: 191 |
e-value: 5e-47 |
Identity: 89.21% |
Span: 417bp (66.5%) |
Frame: 1 |
| Histone H2A; Histone-fold [Medicago truncatula] >gi124360160|gb|ABN08176.1| Histone H2A; Histone-fold [Medicago trunc... |
| Match: gi|15221875|ref|NP_175868.1| |
score: 190 |
e-value: 8e-47 |
Identity: 89.71% |
Span: 408bp (65.1%) |
Frame: 1 |
| GAMMA-H2AX (GAMMA HISTONE VARIANT H2AX); DNA binding [Arabidopsis thaliana] >gi75313113|sp|Q9S9K7.1|H2AXB_ARATH RecNa... |
| Match: gi|15214035|sp|O65759.1|H2AX_CICAR |
score: 189 |
e-value: 2e-46 |
Identity: 89.21% |
Span: 417bp (66.5%) |
Frame: 1 |
| RecName: Full=Histone H2AX >gi3204129|emb|CAA07234.1| histone H2A [Cicer arietinum] |
| Match: gi|15223948|ref|NP_172363.1| |
score: 189 |
e-value: 2e-46 |
Identity: 88.97% |
Span: 408bp (65.1%) |
Frame: 1 |
| H2AXA; DNA binding [Arabidopsis thaliana] >gi75276926|sp|O04848.1|H2AXA_ARATH RecName: Full=Probable histone H2AXa; A... |
| Match: gi|224123270|ref|XP_002319037.1| |
score: 189 |
e-value: 2e-46 |
Identity: 86.81% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi118482637|gb|ABK93238.1| unknown [Populus trichocarpa] >gi|222857413|gb|EEE94960.1... |
| Match: gi|225436841|ref|XP_002271469.1| |
score: 187 |
e-value: 9e-46 |
Identity: 90.37% |
Span: 405bp (64.6%) |
Frame: 1 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi147855438|emb|CAN79609.1| hypothetical protein [Vitis vinifera] >... |
| Match: gi|21593507|gb|AAM65474.1| |
score: 184 |
e-value: 4e-45 |
Identity: 88.32% |
Span: 408bp (65.1%) |
Frame: 1 |
| putative histone H2A [Arabidopsis thaliana] |
| Match: gi|255640861|gb|ACU20713.1| |
score: 184 |
e-value: 7e-45 |
Identity: 84.03% |
Span: 423bp (67.5%) |
Frame: 1 |
| unknown [Glycine max] |
| Match: gi|118487915|gb|ABK95779.1| |
score: 184 |
e-value: 7e-45 |
Identity: 85.31% |
Span: 423bp (67.5%) |
Frame: 1 |
| unknown [Populus trichocarpa] |
| Match: gi|195659531|gb|ACG49233.1| |
score: 182 |
e-value: 2e-44 |
Identity: 88.15% |
Span: 405bp (64.6%) |
Frame: 1 |
| histone H2A [Zea mays] |
| Match: gi|224131426|ref|XP_002328536.1| |
score: 182 |
e-value: 2e-44 |
Identity: 84.62% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone 2 [Populus trichocarpa] >gi222838251|gb|EEE76616.1| histone 2 [Populus trichocarpa] |
| Match: gi|224286646|gb|ACN41027.1| |
score: 182 |
e-value: 3e-44 |
Identity: 85.61% |
Span: 417bp (66.5%) |
Frame: 1 |
| unknown [Picea sitchensis] |
| Match: gi|462234|sp|P35063.1|H2AX_PICAB |
score: 182 |
e-value: 3e-44 |
Identity: 88.72% |
Span: 399bp (63.6%) |
Frame: 1 |
| RecName: Full=Histone H2AX >gi297871|emb|CAA48030.1| histone H2A [Picea abies] >gi|30024112|emb|CAC84681.1| putative ... |
| Match: gi|242085702|ref|XP_002443276.1| |
score: 181 |
e-value: 4e-44 |
Identity: 87.41% |
Span: 405bp (64.6%) |
Frame: 1 |
| hypothetical protein SORBIDRAFT_08g016830 [Sorghum bicolor] >gi241943969|gb|EES17114.1| hypothetical protein SORBIDRA... |
| Match: gi|115488866|ref|NP_001066920.1| |
score: 177 |
e-value: 7e-43 |
Identity: 85.11% |
Span: 423bp (67.5%) |
Frame: 1 |
| Os12g0530000 [Oryza sativa (japonica cultivar-group)] >gi108936012|sp|Q2QPG9.1|H2AXB_ORYSJ RecName: Full=Probable his... |
| Match: gi|168019889|ref|XP_001762476.1| |
score: 177 |
e-value: 9e-43 |
Identity: 86.33% |
Span: 417bp (66.5%) |
Frame: 1 |
| histone H2A [Physcomitrella patens subsp. patens] >gi162686209|gb|EDQ72599.1| histone H2A [Physcomitrella patens subs... |
| Match: gi|168066586|ref|XP_001785216.1| |
score: 176 |
e-value: 2e-42 |
Identity: 86.33% |
Span: 417bp (66.5%) |
Frame: 1 |
| histone H2A [Physcomitrella patens subsp. patens] >gi162663178|gb|EDQ49957.1| histone H2A [Physcomitrella patens subs... |
| Match: gi|195620792|gb|ACG32226.1| |
score: 175 |
e-value: 3e-42 |
Identity: 85.92% |
Span: 423bp (67.5%) |
Frame: 1 |
| histone H2A [Zea mays] |
| Match: gi|255559384|ref|XP_002520712.1| |
score: 173 |
e-value: 1e-41 |
Identity: 82.86% |
Span: 420bp (67.0%) |
Frame: 1 |
| histone h2a, putative [Ricinus communis] >gi223540097|gb|EEF41674.1| histone h2a, putative [Ricinus communis] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
| Match: At1G54690.1 |
score: 190 |
e-value: 5e-49 |
Identity: 89.71% |
Span: 408bp (65.1%) |
Frame: 1 |
| histone H2A, putative | chr1:20418274-20418873 REVERSE |
| Match: At1G08880.1 |
score: 189 |
e-value: 1e-48 |
Identity: 88.97% |
Span: 408bp (65.1%) |
Frame: 1 |
| histone H2A, putative | chr1:2847147-2847679 REVERSE |
| Match: At4G27230.1 |
score: 155 |
e-value: 1e-38 |
Identity: 87.18% |
Span: 339bp (54.1%) |
Frame: 1 |
| histone H2A, putative | chr4:13637521-13638331 REVERSE |
| Match: At5G54640.1 |
score: 154 |
e-value: 3e-38 |
Identity: 85.59% |
Span: 354bp (56.5%) |
Frame: 1 |
| Symbols: HTA1, RAT5 | RAT5 (RESISTANT TO AGROBACTERIUM TRANSFORMATION 5); DNA binding | chr5:22213766-22214505 FORWARD |
| Match: At3G20670.1 |
score: 152 |
e-value: 2e-37 |
Identity: 86.32% |
Span: 339bp (54.1%) |
Frame: 1 |
| histone H2A, putative | chr3:7229478-7229969 FORWARD |
| Match: At1G51060.1 |
score: 152 |
e-value: 2e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| histone H2A, putative | chr1:18930616-18931111 FORWARD |
| Match: At5G59870.1 |
score: 135 |
e-value: 2e-32 |
Identity: 75% |
Span: 342bp (54.5%) |
Frame: 1 |
| histone H2A, putative | chr5:24132831-24133370 REVERSE |
| Match: At5G27670.1 |
score: 131 |
e-value: 3e-31 |
Identity: 70.31% |
Span: 369bp (58.9%) |
Frame: 1 |
| histone H2A, putative | chr5:9792810-9793368 REVERSE |
| Match: At5G02560.1 |
score: 128 |
e-value: 2e-30 |
Identity: 70.83% |
Span: 360bp (57.4%) |
Frame: 1 |
| histone H2A, putative | chr5:575435-576454 FORWARD |
| Match: At1G52740.1 |
score: 88.6 |
e-value: 3e-18 |
Identity: 57.63% |
Span: 330bp (52.6%) |
Frame: 1 |
| histone H2A, putative | chr1:19649077-19649889 FORWARD |
| Match: At2G38810.2 |
score: 87.8 |
e-value: 5e-18 |
Identity: 61.9% |
Span: 312bp (49.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.3 |
score: 87.8 |
e-value: 5e-18 |
Identity: 61.9% |
Span: 312bp (49.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At2G38810.1 |
score: 87.8 |
e-value: 5e-18 |
Identity: 61.9% |
Span: 312bp (49.8%) |
Frame: 1 |
| histone H2A, putative | chr2:16226522-16227757 REVERSE |
| Match: At3G54560.1 |
score: 86.3 |
e-value: 1e-17 |
Identity: 60.95% |
Span: 312bp (49.8%) |
Frame: 1 |
| histone H2A.F/Z | chr3:20207510-20208444 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9S9K7 |
score: 190 |
e-value: 5e-48 |
Identity: 89.71% |
Span: 408bp (65.1%) |
Frame: 1 |
| Probable histone H2AXb OS=Arabidopsis thaliana GN=At1g54690 PE=1 SV=1 |
| Match: O65759 |
score: 189 |
e-value: 1e-47 |
Identity: 89.21% |
Span: 417bp (66.5%) |
Frame: 1 |
| Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1 |
| Match: O04848 |
score: 189 |
e-value: 1e-47 |
Identity: 88.97% |
Span: 408bp (65.1%) |
Frame: 1 |
| Probable histone H2AXa OS=Arabidopsis thaliana GN=At1g08880 PE=1 SV=1 |
| Match: P35063 |
score: 182 |
e-value: 2e-45 |
Identity: 88.72% |
Span: 399bp (63.6%) |
Frame: 1 |
| Histone H2AX OS=Picea abies PE=2 SV=1 |
| Match: Q2QPG9 |
score: 177 |
e-value: 5e-44 |
Identity: 85.11% |
Span: 423bp (67.5%) |
Frame: 1 |
| Probable histone H2AXb OS=Oryza sativa subsp. japonica GN=Os12g0530000 PE=2 SV=1 |
| Match: A2ZL69 |
score: 177 |
e-value: 5e-44 |
Identity: 85.11% |
Span: 423bp (67.5%) |
Frame: 1 |
| Probable histone H2AXb OS=Oryza sativa subsp. indica GN=OsI_037312 PE=3 SV=1 |
| Match: Q8LLP5 |
score: 172 |
e-value: 1e-42 |
Identity: 83.69% |
Span: 423bp (67.5%) |
Frame: 1 |
| Probable histone H2AXa OS=Oryza sativa subsp. japonica GN=Os03g0721900 PE=3 SV=1 |
| Match: A2XLI0 |
score: 172 |
e-value: 1e-42 |
Identity: 83.69% |
Span: 423bp (67.5%) |
Frame: 1 |
| Probable histone H2AXa OS=Oryza sativa subsp. indica GN=OsI_012923 PE=3 SV=1 |
| Match: O81826 |
score: 155 |
e-value: 1e-37 |
Identity: 87.18% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Arabidopsis thaliana GN=At4g27230 PE=1 SV=1 |
| Match: Q9LD28 |
score: 154 |
e-value: 3e-37 |
Identity: 85.59% |
Span: 354bp (56.5%) |
Frame: 1 |
| Histone H2A.6 OS=Arabidopsis thaliana GN=RAT5 PE=1 SV=1 |
| Match: Q84NJ4 |
score: 154 |
e-value: 6e-37 |
Identity: 85.47% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Oryza sativa subsp. japonica GN=Os08g0427700 PE=3 SV=1 |
| Match: A2YVE5 |
score: 154 |
e-value: 6e-37 |
Identity: 85.47% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.3 OS=Oryza sativa subsp. indica GN=OsI_028288 PE=3 SV=1 |
| Match: Q2QS71 |
score: 153 |
e-value: 7e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.7 OS=Oryza sativa subsp. japonica GN=Os12g0438000 PE=2 SV=1 |
| Match: A2ZK29 |
score: 153 |
e-value: 7e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.7 OS=Oryza sativa subsp. indica GN=OsI_036922 PE=3 SV=1 |
| Match: Q43208 |
score: 153 |
e-value: 7e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3 |
| Match: Q6ZL43 |
score: 153 |
e-value: 7e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.1 OS=Oryza sativa subsp. japonica GN=Os07g0545300 PE=2 SV=1 |
| Match: A2YMC5 |
score: 153 |
e-value: 7e-37 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.1 OS=Oryza sativa subsp. indica GN=OsI_26380 PE=3 SV=2 |
| Match: P50567 |
score: 152 |
e-value: 1e-36 |
Identity: 82.3% |
Span: 339bp (54.1%) |
Frame: 1 |
| Histone H2A OS=Chlamydomonas reinhardtii GN=H2A-II PE=3 SV=1 |
| Match: P16866 |
score: 152 |
e-value: 1e-36 |
Identity: 82.3% |
Span: 339bp (54.1%) |
Frame: 1 |
| Histone H2A-IV OS=Volvox carteri PE=3 SV=1 |
| Match: Q43312 |
score: 152 |
e-value: 2e-36 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Protein H2A.7 OS=Triticum aestivum GN=H2A-4 PE=2 SV=3 |
| Match: P16865 |
score: 152 |
e-value: 2e-36 |
Identity: 82.3% |
Span: 339bp (54.1%) |
Frame: 1 |
| Histone H2A-III OS=Volvox carteri PE=3 SV=1 |
| Match: Q6ZL42 |
score: 152 |
e-value: 2e-36 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1 |
| Match: A2YMC6 |
score: 152 |
e-value: 2e-36 |
Identity: 84.62% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1 |
| Match: A2ZK26 |
score: 152 |
e-value: 2e-36 |
Identity: 83.76% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1 |
| Match: Q9LHQ5 |
score: 152 |
e-value: 2e-36 |
Identity: 86.32% |
Span: 339bp (54.1%) |
Frame: 1 |
| Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1 |
|
| 214 lower scoring hits censored -- only 25 best hits are stored. |
