| genbank/nr [blastx] | Showing best 34 hits recorded |
| Match: gi|15240556|ref|NP_200378.1| |
score: 153.3 |
e-value: 2.9e-36 |
Identity: 63.16% |
Span: 564bp (90.1%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi9758601|dbj|BAB09234.1| unnamed protein prod... |
| Match: gi|42408488|dbj|BAD09668.1| |
score: 134 |
e-value: 1.8e-30 |
Identity: 53.44% |
Span: 564bp (90.1%) |
Frame: 1 |
| gi|42408488|dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa (japonica cultivar-gr... |
| Match: gi|15222208|ref|NP_172778.1| |
score: 109.4 |
e-value: 4.8e-23 |
Identity: 66.67% |
Span: 234bp (37.4%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi4850402|gb|AAD31072.1|AC007357_21 Contains s... |
| Match: gi|38606520|emb|CAE05997.2| |
score: 51.22 |
e-value: 1.6e-05 |
Identity: 33.33% |
Span: 189bp (30.2%) |
Frame: 1 |
| OSJNBa0016O02.7 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|35505506|gb|AAH57796.1| |
score: 47.75 |
e-value: 0.00017 |
Identity: 36.51% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|35505506|gb|AAH57796.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] |
| Match: gi|8850217|ref|NP_055284.2| |
score: 47.75 |
e-value: 0.00017 |
Identity: 36.51% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|8850217|ref|NP_055284.2| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] gi|8576316|gb|A... |
| Match: gi|8927581|gb|AAF82129.1| |
score: 47.37 |
e-value: 0.00022 |
Identity: 36.51% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|8927581|gb|AAF82129.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo sapiens] |
| Match: gi|15231912|ref|NP_187457.1| |
score: 47.37 |
e-value: 0.00022 |
Identity: 31.65% |
Span: 222bp (35.5%) |
Frame: 1 |
| RNA-binding protein, putative [Arabidopsis thaliana] >gi6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protei... |
| Match: gi|17508567|ref|NP_493029.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 35.38% |
Span: 183bp (29.2%) |
Frame: 1 |
| gi|17508567|ref|NP_493029.1| cleavage stimulation factor 3' pre-RNA 64kDa like (1M523) [Caenorhabditis elegans] gi|75... |
| Match: gi|4098580|gb|AAD00327.1| |
score: 45.05 |
e-value: 0.001 |
Identity: 29.17% |
Span: 285bp (45.5%) |
Frame: 1 |
| gi|4098580|gb|AAD00327.1| RBM1 [Macropus eugenii] |
| Match: gi|38344030|emb|CAE01512.2| |
score: 44.67 |
e-value: 0.001 |
Identity: 37.7% |
Span: 183bp (29.2%) |
Frame: 1 |
| OJ991214_12.1 [Oryza sativa (japonica cultivar-group)] >gi38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa (japo... |
| Match: gi|37595358|gb|AAQ94565.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 33.33% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|37595358|gb|AAQ94565.1| RNA binding motif protein [Danio rerio] |
| Match: gi|48856822|ref|ZP_00310979.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 42.31% |
Span: 156bp (24.9%) |
Frame: 1 |
| gi|48856822|ref|ZP_00310979.1| COG0724: RNA-binding proteins (RRM domain) [Cytophaga hutchinsonii] |
| Match: gi|31202691|ref|XP_310294.1| |
score: 44.28 |
e-value: 0.002 |
Identity: 30.38% |
Span: 237bp (37.9%) |
Frame: 1 |
| gi|31202691|ref|XP_310294.1| ENSANGP00000015892 [Anopheles gambiae] gi|21293879|gb|EAA06024.1| ENSANGP00000015892 [An... |
| Match: gi|39583263|emb|CAE60055.1| |
score: 44.28 |
e-value: 0.002 |
Identity: 32.35% |
Span: 204bp (32.6%) |
Frame: 1 |
| gi|39583263|emb|CAE60055.1| Hypothetical protein CBG03568 [Caenorhabditis briggsae] |
| Match: gi|38087156|ref|XP_133707.2| |
score: 43.9 |
e-value: 0.002 |
Identity: 33.33% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|38087156|ref|XP_133707.2| RIKEN cDNA 1700012H05 [Mus musculus] gi|12838734|dbj|BAB24311.1| unnamed protein product... |
| Match: gi|39585797|emb|CAE59999.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 34.07% |
Span: 273bp (43.6%) |
Frame: 1 |
| gi|39585797|emb|CAE59999.1| Hypothetical protein CBG03493 [Caenorhabditis briggsae] |
| Match: gi|17553656|ref|NP_499734.1| |
score: 43.51 |
e-value: 0.003 |
Identity: 32.35% |
Span: 204bp (32.6%) |
Frame: 1 |
| gi|17553656|ref|NP_499734.1| cleavage and Polyadenylation Factor (cpf-2) [Caenorhabditis elegans] gi|7504374|pir||T22... |
| Match: gi|46390469|dbj|BAD15930.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 30.49% |
Span: 246bp (39.3%) |
Frame: 1 |
| gi|46390469|dbj|BAD15930.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa (japonica cultivar-grou... |
| Match: gi|47086837|ref|NP_997763.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 31.75% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|47086837|ref|NP_997763.1| RNA binding motif protein, X-linked [Danio rerio] >gi|29436819|gb|AAH49509.1| Rbmx prote... |
| Match: gi|46128087|ref|XP_388597.1| |
score: 43.13 |
e-value: 0.004 |
Identity: 35.23% |
Span: 246bp (39.3%) |
Frame: 1 |
| gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1] >gi|42549055|gb|EAA71898.1| hypoth... |
| Match: gi|4704605|gb|AAD28176.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 36.07% |
Span: 183bp (29.2%) |
Frame: 1 |
| gi|4704605|gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca] |
| Match: gi|47682580|gb|AAH70649.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 33.33% |
Span: 189bp (30.2%) |
Frame: 1 |
| gi|47682580|gb|AAH70649.1| Unknown (protein for MGC:82187) [Xenopus laevis] |
| Match: gi|32489985|emb|CAE05015.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 35.59% |
Span: 177bp (28.3%) |
Frame: 1 |
| OSJNBa0044M19.2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7439994|pir||T06796 |
score: 42.74 |
e-value: 0.006 |
Identity: 31.82% |
Span: 198bp (31.6%) |
Frame: 1 |
| gi|7439994|pir||T06796 glycine-rich RNA-binding protein - garden pea gi|1778374|gb|AAB71417.1| glycine-rich RNA-bindi... |
| Match: gi|47225325|emb|CAG09825.1| |
score: 42.74 |
e-value: 0.006 |
Identity: 28.42% |
Span: 279bp (44.6%) |
Frame: 1 |
| gi|47225325|emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|17508585|ref|NP_493022.1| |
score: 42.36 |
e-value: 0.007 |
Identity: 33.33% |
Span: 171bp (27.3%) |
Frame: 1 |
| gi|17508585|ref|NP_493022.1| small nucleic-acid-binding protein, enriched in embryos and the germline; closely relate... |
| Match: gi|39580202|emb|CAE71709.1| |
score: 42.36 |
e-value: 0.007 |
Identity: 36.84% |
Span: 171bp (27.3%) |
Frame: 1 |
| gi|39580202|emb|CAE71709.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae] |
| Match: gi|32490269|emb|CAE05558.1| |
score: 42.36 |
e-value: 0.007 |
Identity: 34.18% |
Span: 237bp (37.9%) |
Frame: 1 |
| gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa (japonica cultivar-group)] gi|38345164|emb|CAE02946.2| OSJ... |
| Match: gi|17542530|ref|NP_502432.1| |
score: 41.97 |
e-value: 0.009 |
Identity: 41.67% |
Span: 144bp (23.0%) |
Frame: 1 |
| gi|17542530|ref|NP_502432.1| RNA Binding Domain protein (98.0 kD) (rbd-1) [Caenorhabditis elegans] gi|7508323|pir||T2... |
| Match: gi|21554348|gb|AAM63455.1| |
score: 41.97 |
e-value: 0.009 |
Identity: 37.25% |
Span: 153bp (24.4%) |
Frame: 1 |
| gi|21554348|gb|AAM63455.1| unknown [Arabidopsis thaliana] |
| Match: gi|18415425|ref|NP_567594.1| |
score: 41.97 |
e-value: 0.009 |
Identity: 37.25% |
Span: 153bp (24.4%) |
Frame: 1 |
| gi|18415425|ref|NP_567594.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|29349248|ref|NP_812751.1| |
score: 41.97 |
e-value: 0.009 |
Identity: 36.84% |
Span: 171bp (27.3%) |
Frame: 1 |
| gi|29349248|ref|NP_812751.1| putative RNA-binding protein rbpA [Bacteroides thetaiotaomicron VPI-5482] gi|29341156|gb... |
| Match: gi|7485727|pir||T04887 |
score: 41.97 |
e-value: 0.009 |
Identity: 37.25% |
Span: 153bp (24.4%) |
Frame: 1 |
| gi|7485727|pir||T04887 hypothetical protein F18F4.130 - Arabidopsis thaliana gi|2827657|emb|CAA16611.1| putative prot... |
|
| arabidopsis/peptide [blastx] | Showing best 24 hits recorded |
| Match: At5g55670.1 |
score: 153.3 |
e-value: 8.7e-38 |
Identity: 63.16% |
Span: 564bp (90.1%) |
Frame: 1 |
| At5g55670.1 68412.m06279 RRM-containing protein |
| Match: At1g13190.1 |
score: 109.4 |
e-value: 1.4e-24 |
Identity: 66.67% |
Span: 234bp (37.4%) |
Frame: 1 |
| At1g13190.1 68408.m01384 RRM-containing protein |
| Match: At3g08000.1 |
score: 47.37 |
e-value: 6.7e-06 |
Identity: 31.65% |
Span: 222bp (35.5%) |
Frame: 1 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At4g20030.1 |
score: 41.97 |
e-value: 0.00028 |
Identity: 37.25% |
Span: 153bp (24.4%) |
Frame: 1 |
| At4g20030.1 68411.m02674 RNA recognition motif (RRM) - containing protein low similarity to heterogeneous nuclear rib... |
| Match: At2g21660.2 |
score: 40.82 |
e-value: 0.00063 |
Identity: 33.87% |
Span: 186bp (29.7%) |
Frame: 1 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.1 |
score: 40.82 |
e-value: 0.00063 |
Identity: 33.87% |
Span: 186bp (29.7%) |
Frame: 1 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At3g20930.1 |
score: 40.82 |
e-value: 0.00063 |
Identity: 35.29% |
Span: 201bp (32.1%) |
Frame: 1 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At3g47120.1 |
score: 40.43 |
e-value: 0.00082 |
Identity: 24.44% |
Span: 270bp (43.1%) |
Frame: 1 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g51300.2 |
score: 40.43 |
e-value: 0.00082 |
Identity: 33.93% |
Span: 168bp (26.8%) |
Frame: 1 |
| At5g51300.2 68412.m07949 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At5g51300.1 |
score: 40.43 |
e-value: 0.00082 |
Identity: 33.93% |
Span: 168bp (26.8%) |
Frame: 1 |
| At5g51300.1 68412.m07948 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At4g39260.2 |
score: 39.66 |
e-value: 0.001 |
Identity: 36.21% |
Span: 174bp (27.8%) |
Frame: 1 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 36.21% |
Span: 174bp (27.8%) |
Frame: 1 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g13850.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 38.3% |
Span: 141bp (22.5%) |
Frame: 1 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g13850.2 |
score: 39.66 |
e-value: 0.001 |
Identity: 38.3% |
Span: 141bp (22.5%) |
Frame: 1 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g39260.3 |
score: 39.66 |
e-value: 0.001 |
Identity: 36.21% |
Span: 174bp (27.8%) |
Frame: 1 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g56860.3 |
score: 39.28 |
e-value: 0.002 |
Identity: 31.51% |
Span: 174bp (27.8%) |
Frame: 1 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 39.28 |
e-value: 0.002 |
Identity: 31.51% |
Span: 174bp (27.8%) |
Frame: 1 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 39.28 |
e-value: 0.002 |
Identity: 31.51% |
Span: 174bp (27.8%) |
Frame: 1 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At5g19350.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 30.34% |
Span: 267bp (42.7%) |
Frame: 1 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At5g61030.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 31.58% |
Span: 171bp (27.3%) |
Frame: 1 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At3g26420.1 |
score: 38.51 |
e-value: 0.003 |
Identity: 36.54% |
Span: 156bp (24.9%) |
Frame: 1 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At5g19030.1 |
score: 37.74 |
e-value: 0.005 |
Identity: 31.25% |
Span: 192bp (30.7%) |
Frame: 1 |
| At5g19030.1 68412.m02073 RNA recognition motif (RRM) - containing protein low similarity to Cold-inducible RNA-bindin... |
| Match: At4g27000.1 |
score: 37.35 |
e-value: 0.007 |
Identity: 37.5% |
Span: 144bp (23.0%) |
Frame: 1 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At1g22330.1 |
score: 36.96 |
e-value: 0.009 |
Identity: 27.47% |
Span: 273bp (43.6%) |
Frame: 1 |
| At1g22330.1 68408.m02526 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
|
