| genbank/nr [blastx] | Showing best 31 hits recorded |
| Match: gi|9858779|gb|AAG01126.1| |
score: 145.2 |
e-value: 6.1e-34 |
Identity: 84.31% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|9858779|gb|AAG01126.1| BAC19.11 [Lycopersicon esculentum] |
| Match: gi|3850821|emb|CAA77135.1| |
score: 141 |
e-value: 1.1e-32 |
Identity: 80.95% |
Span: 315bp (51.1%) |
Frame: 3 |
| gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|3850823|emb|CAA77136.1| |
score: 139.8 |
e-value: 2.5e-32 |
Identity: 79.05% |
Span: 315bp (51.1%) |
Frame: 3 |
| gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor, large subunit [Nicotiana plumbaginifolia] |
| Match: gi|22655131|gb|AAM98156.1| |
score: 138.3 |
e-value: 7.4e-32 |
Identity: 76.19% |
Span: 315bp (51.1%) |
Frame: 3 |
| putative U2 snRNP auxiliary factor [Arabidopsis thaliana] |
| Match: gi|30696485|ref|NP_176287.3| |
score: 138.3 |
e-value: 7.4e-32 |
Identity: 76.19% |
Span: 315bp (51.1%) |
Frame: 3 |
| U2 snRNP auxiliary factor large subunit, putative [Arabidopsis thaliana] >gi209572798|sp|Q8L716.2|U2A2B_ARATH RecName... |
| Match: gi|25404298|pir||E96634 |
score: 138.3 |
e-value: 7.4e-32 |
Identity: 76.19% |
Span: 315bp (51.1%) |
Frame: 3 |
| gi|25404298|pir||E96634 probable U2 snRNP auxiliary factor T7P1.5 [imported] - Arabidopsis thaliana gi|12323333|gb|AA... |
| Match: gi|30690730|ref|NP_849509.1| |
score: 132.5 |
e-value: 4.1e-30 |
Identity: 63.97% |
Span: 396bp (64.2%) |
Frame: 3 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi19310597|gb|AAL85029.1| ... |
| Match: gi|15234495|ref|NP_195387.1| |
score: 130.2 |
e-value: 2e-29 |
Identity: 77.45% |
Span: 306bp (49.6%) |
Frame: 3 |
| ATU2AF65A; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi75318082|sp|O23212.2|U2A... |
| Match: gi|29367529|gb|AAO72620.1| |
score: 124.8 |
e-value: 8.5e-28 |
Identity: 72.62% |
Span: 246bp (39.9%) |
Frame: 3 |
| gi|29367529|gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa (japonica cultivar-group)] |
| Match: gi|27882060|gb|AAH44032.1| |
score: 70.09 |
e-value: 2.5e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|27882060|gb|AAH44032.1| U2af2-prov protein [Xenopus laevis] |
| Match: gi|19526824|ref|NP_598432.1| |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|19526824|ref|NP_598432.1| U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2; U2 small nuclear ribonucle... |
| Match: gi|6005926|ref|NP_009210.1| |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|6005926|ref|NP_009210.1| U2 small nuclear ribonucleoprotein auxiliary factor (65kD); splicing factor U2AF 65 kD su... |
| Match: gi|107723|pir||S20250 |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|107723|pir||S20250 splicing factor U2AF large chain - human gi|228543|prf||1805352A splicing factor U2AF:SUBUNIT=l... |
| Match: gi|14250571|gb|AAH08740.1| |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|14250571|gb|AAH08740.1| U2AF2 protein [Homo sapiens] gi|27695339|gb|AAH43071.1| U2af2 protein [Mus musculus] |
| Match: gi|17136764|ref|NP_476891.1| |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 46.08% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|17136764|ref|NP_476891.1| U2 small nuclear riboprotein auxiliary factor 50 CG9998-PA [Drosophila melanogaster] gi|... |
| Match: gi|34854490|ref|XP_218195.2| |
score: 68.17 |
e-value: 9.4e-11 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|34854490|ref|XP_218195.2| similar to splicing factor U2AF homolog - mouse [Rattus norvegicus] |
| Match: gi|136628|sp|P26369|U2AF_MOUSE |
score: 67.78 |
e-value: 1.2e-10 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|136628|sp|P26369|U2AF_MOUSE Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 snRNP aux... |
| Match: gi|110998|pir||S22646 |
score: 67.78 |
e-value: 1.2e-10 |
Identity: 49.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|110998|pir||S22646 splicing factor U2AF homolog - mouse gi|1334149|emb|CAA45875.1| unnamed protein product [Mus mu... |
| Match: gi|31206085|ref|XP_311994.1| |
score: 67.4 |
e-value: 1.6e-10 |
Identity: 51% |
Span: 300bp (48.6%) |
Frame: 3 |
| gi|31206085|ref|XP_311994.1| ENSANGP00000018558 [Anopheles gambiae] gi|21296083|gb|EAA08228.1| ENSANGP00000018558 [An... |
| Match: gi|38074194|ref|XP_124040.2| |
score: 62 |
e-value: 6.7e-09 |
Identity: 44.34% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|38074194|ref|XP_124040.2| similar to U2AF65 protein [Mus musculus] |
| Match: gi|38087244|ref|XP_141947.2| |
score: 60.85 |
e-value: 1.5e-08 |
Identity: 47.06% |
Span: 306bp (49.6%) |
Frame: 3 |
| gi|38087244|ref|XP_141947.2| similar to U2AF65 protein [Mus musculus] |
| Match: gi|18446992|gb|AAL68087.1| |
score: 53.53 |
e-value: 2.4e-06 |
Identity: 42.16% |
Span: 303bp (49.1%) |
Frame: 3 |
| gi|18446992|gb|AAL68087.1| AT16577p [Drosophila melanogaster] |
| Match: gi|24659166|ref|NP_611769.2| |
score: 53.53 |
e-value: 2.4e-06 |
Identity: 42.16% |
Span: 303bp (49.1%) |
Frame: 3 |
| gi|24659166|ref|NP_611769.2| CG3162-PA [Drosophila melanogaster] gi|7291545|gb|AAF46969.1| CG3162-PA [Drosophila mela... |
| Match: gi|38101779|gb|EAA48690.1| |
score: 49.68 |
e-value: 3.5e-05 |
Identity: 42.45% |
Span: 315bp (51.1%) |
Frame: 3 |
| gi|38101779|gb|EAA48690.1| hypothetical protein MG00348.4 [Magnaporthe grisea 70-15] |
| Match: gi|21245140|gb|AAM44400.1| |
score: 49.29 |
e-value: 4.5e-05 |
Identity: 42% |
Span: 300bp (48.6%) |
Frame: 3 |
| gi|21245140|gb|AAM44400.1| U2af splicing factor protein 1, isoform d [Caenorhabditis elegans] |
| Match: gi|17556654|ref|NP_497326.1| |
score: 49.29 |
e-value: 4.5e-05 |
Identity: 42% |
Span: 300bp (48.6%) |
Frame: 3 |
| gi|17556654|ref|NP_497326.1| U2AF splicing factor (55.4 kD) (uaf-1) [Caenorhabditis elegans] gi|6226906|sp|P90978|U2A... |
| Match: gi|15487635|gb|AAL00879.1| |
score: 49.29 |
e-value: 4.5e-05 |
Identity: 42% |
Span: 300bp (48.6%) |
Frame: 3 |
| gi|15487635|gb|AAL00879.1| U2af splicing factor protein 1, isoform c [Caenorhabditis elegans] |
| Match: gi|4033483|sp|P90727|U2AF_CAEBR |
score: 48.14 |
e-value: 0.0001 |
Identity: 43% |
Span: 300bp (48.6%) |
Frame: 3 |
| gi|4033483|sp|P90727|U2AF_CAEBR Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor 65 kDa subunit) (U2 SNRNP au... |
| Match: gi|32419565|ref|XP_330226.1| |
score: 45.82 |
e-value: 0.0005 |
Identity: 37.14% |
Span: 315bp (51.1%) |
Frame: 3 |
| gi|32419565|ref|XP_330226.1| hypothetical protein [Neurospora crassa] gi|28925805|gb|EAA34808.1| hypothetical protein... |
| Match: gi|5822501|pdb|2U2F|A |
score: 44.67 |
e-value: 0.001 |
Identity: 58.82% |
Span: 102bp (16.5%) |
Frame: 3 |
| gi|5822501|pdb|2U2F|A Chain A, Solution Structure Of The Second Rna-Binding Domain Of Hu2af65 |
| Match: gi|18406905|ref|NP_564764.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 63.83% |
Span: 141bp (22.9%) |
Frame: 3 |
| gi|18406905|ref|NP_564764.1| U2 snRNP auxiliary factor, large subunit, putative [Arabidopsis thaliana] gi|25404293|pi... |
|
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At1g60900.1 |
score: 138.3 |
e-value: 2.7e-33 |
Identity: 76.19% |
Span: 315bp (51.1%) |
Frame: 3 |
| At1g60900.1 68408.m06287 splicing factor U2AF 65 kDa subunit, putative similar to U2 snRNP auxiliary factor, large su... |
| Match: At4g36690.2 |
score: 132.5 |
e-value: 1.5e-31 |
Identity: 63.97% |
Span: 396bp (64.2%) |
Frame: 3 |
| At4g36690.2 68411.m04734 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At4g36690.1 |
score: 130.2 |
e-value: 7.5e-31 |
Identity: 77.45% |
Span: 306bp (49.6%) |
Frame: 3 |
| At4g36690.1 68411.m04733 splicing factor U2AF 65 kDa subunit, putative U2 auxiliary factor 65 kDa subunit, U2 snRNP a... |
| Match: At1g60830.1 |
score: 44.28 |
e-value: 5.4e-05 |
Identity: 63.83% |
Span: 141bp (22.9%) |
Frame: 3 |
| At1g60830.1 68408.m06279 U2 snRNP auxiliary factor, large subunit, putative similar to GI:3850823 from (Nicotiana plu... |
| Match: At2g33440.1 |
score: 37.74 |
e-value: 0.005 |
Identity: 32.53% |
Span: 237bp (38.4%) |
Frame: 3 |
| At2g33440.1 68409.m03708 splicing factor U2AF (U2 snRNP auxiliary factor large subunit), putative similar to Splicing... |
|
