| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At2G19930.1 |
score: 174 |
e-value: 4e-44 |
Identity: 47.85% |
Span: 615bp (100.0%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8614615-8619523 REVERSE |
| Match: At2G19920.1 |
score: 172 |
e-value: 1e-43 |
Identity: 46.95% |
Span: 615bp (100.0%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8609304-8613969 REVERSE |
| Match: At2G19910.1 |
score: 170 |
e-value: 7e-43 |
Identity: 46.34% |
Span: 606bp (98.5%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein | chr2:8602902-8607839 REVERSE |
| Match: At1G14790.1 |
score: 57 |
e-value: 8e-09 |
Identity: 26.28% |
Span: 468bp (76.1%) |
Frame: 1 |
| Symbols: ATRDRP1, RDR1 | RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding | ... |
| Match: At3G49500.1 |
score: 57 |
e-value: 8e-09 |
Identity: 23.93% |
Span: 489bp (79.5%) |
Frame: 1 |
| Symbols: SGS2, SDE1, RDR6 | RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding | chr3:18360178-18364190 REV... |
| Match: At4G11130.1 |
score: 52.8 |
e-value: 2e-07 |
Identity: 24.24% |
Span: 474bp (77.1%) |
Frame: 1 |
| Symbols: RDR2 | RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase | chr4:6780518-6784386 FORWARD |
|
| 1 lower scoring hits censored -- only 6 best hits are stored. |
| genbank/nr [blastx] | Showing best 38 hits recorded |
| Match: gi|110738636|dbj|BAF01243.1| |
score: 174 |
e-value: 2e-42 |
Identity: 47.85% |
Span: 615bp (100.0%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|42569168|ref|NP_179583.3| |
score: 174 |
e-value: 2e-42 |
Identity: 47.85% |
Span: 615bp (100.0%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] |
| Match: gi|42569166|ref|NP_179582.2| |
score: 172 |
e-value: 9e-42 |
Identity: 46.95% |
Span: 615bp (100.0%) |
Frame: 1 |
| gi|42569166|ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] |
| Match: gi|42569164|ref|NP_179581.2| |
score: 170 |
e-value: 4e-41 |
Identity: 46.34% |
Span: 606bp (98.5%) |
Frame: 1 |
| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana] |
| Match: gi|3687227|gb|AAC62125.1| |
score: 170 |
e-value: 4e-41 |
Identity: 46.34% |
Span: 606bp (98.5%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|3687226|gb|AAC62124.1| |
score: 167 |
e-value: 2e-40 |
Identity: 45.66% |
Span: 615bp (100.0%) |
Frame: 1 |
| gi|3687226|gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|3687225|gb|AAC62123.1| |
score: 167 |
e-value: 3e-40 |
Identity: 42.74% |
Span: 615bp (100.0%) |
Frame: 1 |
| hypothetical protein [Arabidopsis thaliana] |
| Match: gi|34903600|ref|NP_913147.1| |
score: 166 |
e-value: 8e-40 |
Identity: 45.15% |
Span: 597bp (97.1%) |
Frame: 1 |
| gi|34903600|ref|NP_913147.1| P0419B01.13 [Oryza sativa (japonica cultivar-group)] gi|14209602|dbj|BAB56097.1| P0419B0... |
| Match: gi|56201770|dbj|BAD73220.1| |
score: 166 |
e-value: 8e-40 |
Identity: 45.15% |
Span: 597bp (97.1%) |
Frame: 1 |
| gi|56201770|dbj|BAD73220.1| unknown protein [Oryza sativa (japonica cultivar-group)] >gi|56201877|dbj|BAD73327.1| unk... |
| Match: gi|34903602|ref|NP_913148.1| |
score: 155 |
e-value: 1e-36 |
Identity: 43.07% |
Span: 591bp (96.1%) |
Frame: 1 |
| gi|34903602|ref|NP_913148.1| P0419B01.14 [Oryza sativa (japonica cultivar-group)] gi|14209603|dbj|BAB56098.1| P0419B0... |
| Match: gi|56201772|dbj|BAD73222.1| |
score: 155 |
e-value: 1e-36 |
Identity: 43.07% |
Span: 591bp (96.1%) |
Frame: 1 |
| gi|56201772|dbj|BAD73222.1| RNA-dependent RNA polymerase -like [Oryza sativa (japonica cultivar-group)] >gi|56201879|... |
| Match: gi|34913398|ref|NP_918046.1| |
score: 61.6 |
e-value: 2e-08 |
Identity: 24.46% |
Span: 540bp (87.8%) |
Frame: 1 |
| gi|34913398|ref|NP_918046.1| putative RNA-directed RNA polymerase [Oryza sativa (japonica cultivar-group)] gi|2132814... |
| Match: gi|83773394|dbj|BAE63521.1| |
score: 60.1 |
e-value: 6e-08 |
Identity: 27.4% |
Span: 606bp (98.5%) |
Frame: 1 |
| unnamed |
| Match: gi|74830367|emb|CAI39056.1| |
score: 58.9 |
e-value: 1e-07 |
Identity: 26.51% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|74830367|emb|CAI39056.1| RNA-dependent RNA polymerase [Paramecium tetraurelia] |
| Match: gi|92886759|gb|ABE88477.1| |
score: 58.2 |
e-value: 2e-07 |
Identity: 23.53% |
Span: 510bp (82.9%) |
Frame: 1 |
| RNA-binding |
| Match: gi|15422180|gb|AAK95829.1| |
score: 58.2 |
e-value: 2e-07 |
Identity: 27.39% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|15422180|gb|AAK95829.1| putative RNA-dependent RNA polymerase [Diaporthe ambigua] |
| Match: gi|71000487|ref|XP_754927.1| |
score: 57.8 |
e-value: 3e-07 |
Identity: 28.19% |
Span: 555bp (90.2%) |
Frame: 1 |
| RNA-directed |
| Match: gi|18656898|gb|AAL78034.1| |
score: 57.8 |
e-value: 3e-07 |
Identity: 28.03% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|18656898|gb|AAL78034.1| putative RNA-dependent RNA polymerase RDP-1 [Diaporthe perjuncta] |
| Match: gi|15223906|ref|NP_172932.1| |
score: 57 |
e-value: 5e-07 |
Identity: 26.28% |
Span: 468bp (76.1%) |
Frame: 1 |
| RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding [Arabidopsis thaliana] >gi87... |
| Match: gi|15229153|ref|NP_190519.1| |
score: 57 |
e-value: 5e-07 |
Identity: 23.93% |
Span: 489bp (79.5%) |
Frame: 1 |
| RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); RNA-directed RNA polymerase/ nucleic acid binding [Arabidopsis thaliana] >gi12... |
| Match: gi|51989472|gb|AAU21242.1| |
score: 57 |
e-value: 5e-07 |
Identity: 26.04% |
Span: 504bp (82.0%) |
Frame: 1 |
| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] |
| Match: gi|24935275|gb|AAN64409.1| |
score: 57 |
e-value: 5e-07 |
Identity: 26.28% |
Span: 468bp (76.1%) |
Frame: 1 |
| RNA-dependent RNA polymerase 1 [Arabidopsis thaliana] |
| Match: gi|40794965|gb|AAR91036.1| |
score: 57 |
e-value: 5e-07 |
Identity: 25% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|40794965|gb|AAR91036.1| RNA-directed RNA polymerase 1 [Hordeum vulgare subsp. vulgare] |
| Match: gi|4375829|emb|CAA09894.1| |
score: 57 |
e-value: 5e-07 |
Identity: 26.28% |
Span: 468bp (76.1%) |
Frame: 1 |
| RNA-directed RNA polymerase [Arabidopsis thaliana] |
| Match: gi|17227102|gb|AAL38011.1| |
score: 56.6 |
e-value: 7e-07 |
Identity: 25.95% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|17227102|gb|AAL38011.1| putative RNA-dependent RNA polymerase [Phomopsis sp. CMW 5588] |
| Match: gi|46128677|ref|XP_388892.1| |
score: 56.6 |
e-value: 7e-07 |
Identity: 29.49% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|46128677|ref|XP_388892.1| hypothetical protein FG08716.1 [Gibberella zeae PH-1] >gi|42549570|gb|EAA72413.1| hypoth... |
| Match: gi|8248473|gb|AAF74208.1| |
score: 56.2 |
e-value: 9e-07 |
Identity: 23.93% |
Span: 489bp (79.5%) |
Frame: 1 |
| gi|8248473|gb|AAF74208.1| RNA-dependent RNA polymerase [Arabidopsis thaliana] |
| Match: gi|39970563|ref|XP_366672.1| |
score: 56.2 |
e-value: 9e-07 |
Identity: 30.13% |
Span: 468bp (76.1%) |
Frame: 1 |
| gi|39970563|ref|XP_366672.1| hypothetical protein MG02748.4 [Magnaporthe grisea 70-15] |
| Match: gi|86196450|gb|EAQ71088.1| |
score: 56.2 |
e-value: 9e-07 |
Identity: 30.13% |
Span: 468bp (76.1%) |
Frame: 1 |
| hypothetical |
| Match: gi|33331167|gb|AAQ10792.1| |
score: 55.8 |
e-value: 1e-06 |
Identity: 26.8% |
Span: 459bp (74.6%) |
Frame: 1 |
| gi|33331167|gb|AAQ10792.1| RNA-directed RNA polymerase-like protein [Branchiostoma floridae] |
| Match: gi|74830373|emb|CAI39057.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 31.61% |
Span: 462bp (75.1%) |
Frame: 1 |
| gi|74830373|emb|CAI39057.1| RNA-dependent RNA polymerase [Paramecium tetraurelia] |
| Match: gi|88182372|gb|EAQ89840.1| |
score: 55.5 |
e-value: 2e-06 |
Identity: 28.66% |
Span: 471bp (76.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|4138343|emb|CAA09896.1| |
score: 54.7 |
e-value: 3e-06 |
Identity: 23.39% |
Span: 513bp (83.4%) |
Frame: 1 |
| RNA-directed RNA polymerase [Petunia x hybrida] |
| Match: gi|51989474|gb|AAU21243.1| |
score: 53.9 |
e-value: 4e-06 |
Identity: 22.88% |
Span: 459bp (74.6%) |
Frame: 1 |
| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana] |
| Match: gi|40794967|gb|AAR91037.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 20.51% |
Span: 468bp (76.1%) |
Frame: 1 |
| RNA-directed RNA polymerase 2 [Hordeum vulgare subsp. vulgare] |
| Match: gi|15237051|ref|NP_192851.1| |
score: 52.8 |
e-value: 1e-05 |
Identity: 24.24% |
Span: 474bp (77.1%) |
Frame: 1 |
| RDR2 (RNA-DEPENDENT RNA POLYMERASE 2); RNA-directed RNA polymerase [Arabidopsis thaliana] >gi3600048|gb|AAC35535.1| s... |
| Match: gi|4138282|emb|CAA09697.1| |
score: 51.6 |
e-value: 2e-05 |
Identity: 25.64% |
Span: 468bp (76.1%) |
Frame: 1 |
| RNA-directed RNA polymerase [Nicotiana tabacum] |
| Match: gi|85074682|ref|XP_964248.1| |
score: 51.2 |
e-value: 3e-05 |
Identity: 29.3% |
Span: 468bp (76.1%) |
Frame: 1 |
| hypothetical |
|
| 15 lower scoring hits censored -- only 38 best hits are stored. |
