| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15239901|ref|NP_196780.1| |
score: 177.6 |
e-value: 8.7e-53 |
Identity: 89.58% |
Span: 288bp (47.1%) |
Frame: 1 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi32129916|sp|Q9FMP4.1|PM14_ARATH RecName: Ful... |
| Match: gi|32129324|gb|AAP73851.1| |
score: 166.8 |
e-value: 8.5e-50 |
Identity: 86.17% |
Span: 282bp (46.2%) |
Frame: 1 |
| gi|32129324|gb|AAP73851.1| putative RNA binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31206383|ref|XP_312143.1| |
score: 139.4 |
e-value: 3.2e-39 |
Identity: 69.15% |
Span: 282bp (46.2%) |
Frame: 1 |
| gi|31206383|ref|XP_312143.1| ENSANGP00000022192 [Anopheles gambiae] gi|21295636|gb|EAA07781.1| ENSANGP00000022192 [An... |
| Match: gi|7706326|ref|NP_057131.1| |
score: 137.9 |
e-value: 9.5e-32 |
Identity: 58.33% |
Span: 327bp (53.5%) |
Frame: 1 |
| gi|7706326|ref|NP_057131.1| pre-mRNA branch site protein p14; CGI-110 protein; splicing factor 3B, 14 kDa subunit [Ho... |
| Match: gi|34785490|gb|AAH57709.1| |
score: 136 |
e-value: 3.6e-31 |
Identity: 57.5% |
Span: 327bp (53.5%) |
Frame: 1 |
| gi|34785490|gb|AAH57709.1| MGC68842 protein [Xenopus laevis] |
| Match: gi|21357707|ref|NP_648037.1| |
score: 135.6 |
e-value: 4.7e-31 |
Identity: 57.63% |
Span: 321bp (52.5%) |
Frame: 1 |
| gi|21357707|ref|NP_648037.1| CG13298-PA [Drosophila melanogaster] gi|32699626|sp|Q9VRV7|PM14_DROME Pre-mRNA branch si... |
| Match: gi|32564829|ref|NP_493659.2| |
score: 127.9 |
e-value: 3e-33 |
Identity: 63.33% |
Span: 270bp (44.2%) |
Frame: 1 |
| gi|32564829|ref|NP_493659.2| RNA-binding region RNP-1 (2A389) [Caenorhabditis elegans] gi|32699564|sp|Q8ITY4|PM14_CAE... |
| Match: gi|29841272|gb|AAP06304.1| |
score: 119.8 |
e-value: 9.7e-32 |
Identity: 68.75% |
Span: 240bp (39.3%) |
Frame: 1 |
| gi|29841272|gb|AAP06304.1| similar to GenBank Accession Number AE003563 CG13298 gene product in Drosophila melanogast... |
| Match: gi|23484216|gb|EAA19623.1| |
score: 114.4 |
e-value: 1.1e-24 |
Identity: 64.37% |
Span: 261bp (42.7%) |
Frame: 1 |
| gi|23484216|gb|EAA19623.1| Drosophila melanogaster RE19804p-related [Plasmodium yoelii yoelii] |
| Match: gi|23508934|ref|NP_701602.1| |
score: 108.2 |
e-value: 4.9e-27 |
Identity: 63.64% |
Span: 231bp (37.8%) |
Frame: 1 |
| gi|23508934|ref|NP_701602.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23496772|gb|AAN36326.1| h... |
| Match: gi|38110166|gb|EAA55928.1| |
score: 107.1 |
e-value: 6.1e-24 |
Identity: 52.13% |
Span: 279bp (45.7%) |
Frame: 1 |
| gi|38110166|gb|EAA55928.1| hypothetical protein MG01579.4 [Magnaporthe grisea 70-15] |
| Match: gi|7497730|pir||T32782 |
score: 93.59 |
e-value: 6.1e-23 |
Identity: 60% |
Span: 210bp (34.4%) |
Frame: 1 |
| gi|7497730|pir||T32782 hypothetical protein C50D2.5 - Caenorhabditis elegans |
| Match: gi|19112627|ref|NP_595835.1| |
score: 90.12 |
e-value: 1.5e-17 |
Identity: 60.61% |
Span: 198bp (32.4%) |
Frame: 1 |
| gi|19112627|ref|NP_595835.1| putative splicing factor; RNA-binding domain [Schizosaccharomyces pombe] gi|7492023|pir|... |
| Match: gi|15226021|ref|NP_179093.1| |
score: 80.11 |
e-value: 1.4e-18 |
Identity: 73.47% |
Span: 147bp (24.1%) |
Frame: 1 |
| gi|15226021|ref|NP_179093.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25411583|pir||D... |
| Match: gi|31559105|gb|AAP50255.1| |
score: 66.24 |
e-value: 3.5e-10 |
Identity: 38.54% |
Span: 285bp (46.6%) |
Frame: 1 |
| gi|31559105|gb|AAP50255.1| P14 U2 snRNP protein [Trypanosoma cruzi] |
| Match: gi|19073974|ref|NP_584580.1| |
score: 58.92 |
e-value: 5.6e-08 |
Identity: 40% |
Span: 195bp (31.9%) |
Frame: 1 |
| gi|19073974|ref|NP_584580.1| similarity to HYPOTHETICAL PROTEIN CGB0_HUMAN [Encephalitozoon cuniculi] gi|19068616|emb... |
| Match: gi|32129324|gb|AAP73851.1| |
score: 52.76 |
e-value: 8.5e-50 |
Identity: 72.73% |
Span: 99bp (16.2%) |
Frame: 2 |
| gi|32129324|gb|AAP73851.1| putative RNA binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15239901|ref|NP_196780.1| |
score: 51.99 |
e-value: 8.7e-53 |
Identity: 69.7% |
Span: 99bp (16.2%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi32129916|sp|Q9FMP4.1|PM14_ARATH RecName: Ful... |
| Match: gi|38075240|ref|XP_355363.1| |
score: 50.06 |
e-value: 2.6e-05 |
Identity: 28.41% |
Span: 243bp (39.8%) |
Frame: 1 |
| gi|38075240|ref|XP_355363.1| similar to embryonic poly(A) binding protein [Mus musculus] |
| Match: gi|23487306|gb|EAA21016.1| |
score: 48.91 |
e-value: 5.8e-05 |
Identity: 34.18% |
Span: 231bp (37.8%) |
Frame: 1 |
| gi|23487306|gb|EAA21016.1| splicing factor, arginine/serine-rich 4 [Plasmodium yoelii yoelii] |
| Match: gi|23619158|ref|NP_705120.1| |
score: 46.98 |
e-value: 0.00022 |
Identity: 31.11% |
Span: 237bp (38.8%) |
Frame: 1 |
| gi|23619158|ref|NP_705120.1| cyclophilin, putative [Plasmodium falciparum 3D7] gi|23615365|emb|CAD52356.1| cyclophili... |
| Match: gi|23508020|ref|NP_700690.1| |
score: 46.59 |
e-value: 0.00029 |
Identity: 33.77% |
Span: 228bp (37.3%) |
Frame: 1 |
| gi|23508020|ref|NP_700690.1| pre-mRNA splicing factor, putative [Plasmodium falciparum 3D7] gi|23495082|gb|AAN35414.1... |
| Match: gi|37590406|gb|AAH59662.1| |
score: 46.59 |
e-value: 0.00029 |
Identity: 31.18% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|37590406|gb|AAH59662.1| Unknown (protein for MGC:73346) [Danio rerio] |
| Match: gi|34897348|ref|NP_910020.1| |
score: 46.21 |
e-value: 0.00037 |
Identity: 31.91% |
Span: 273bp (44.7%) |
Frame: 1 |
| gi|34897348|ref|NP_910020.1| putative small nuclear ribonucleoprotein [Oryza sativa] gi|15042832|gb|AAK82455.1| putat... |
| Match: gi|34860763|ref|XP_230831.2| |
score: 46.21 |
e-value: 0.00037 |
Identity: 26.97% |
Span: 246bp (40.3%) |
Frame: 1 |
| gi|34860763|ref|XP_230831.2| similar to embryonic poly(A) binding protein [Rattus norvegicus] |
| Match: gi|64970|emb|CAA40721.1| |
score: 46.21 |
e-value: 0.00037 |
Identity: 30.11% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis] |
| Match: gi|30353795|gb|AAH52100.1| |
score: 46.21 |
e-value: 0.00037 |
Identity: 30.11% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|30353795|gb|AAH52100.1| Pabpc1-prov protein [Xenopus laevis] |
| Match: gi|38100167|gb|EAA47337.1| |
score: 45.82 |
e-value: 0.00049 |
Identity: 39.22% |
Span: 147bp (24.1%) |
Frame: 1 |
| gi|38100167|gb|EAA47337.1| hypothetical protein MG02580.4 [Magnaporthe grisea 70-15] |
| Match: gi|2500581|sp|O09032|ELV4_RAT |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|2500581|sp|O09032|ELV4_RAT ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D) gi|19... |
| Match: gi|2500580|sp|Q61701|ELV4_MOUSE |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|2500580|sp|Q61701|ELV4_MOUSE ELAV-like protein 4 (Paraneoplastic encephalomyelitis antigen HuD) (Hu-antigen D) gi|... |
| Match: gi|26347767|dbj|BAC37532.1| |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus] |
| Match: gi|3183544|sp|P11940|PAB1_HUMAN |
score: 45.44 |
e-value: 0.00064 |
Identity: 29.03% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|3183544|sp|P11940|PAB1_HUMAN Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) gi|1562511|gb|AA... |
| Match: gi|12851808|dbj|BAB29173.1| |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus] |
| Match: gi|6754266|ref|NP_034618.1| |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|6754266|ref|NP_034618.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); HU-antigen D ... |
| Match: gi|12229876|sp|Q15097|PAB2_HUMAN |
score: 45.44 |
e-value: 0.00064 |
Identity: 29.03% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|12229876|sp|Q15097|PAB2_HUMAN Polyadenylate-binding protein 2 (Poly(A)-binding protein 2) (PABP 2) gi|1082703|pir|... |
| Match: gi|28879001|gb|AAH48159.1| |
score: 45.44 |
e-value: 0.00064 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus] |
| Match: gi|27924189|gb|AAH44979.1| |
score: 45.05 |
e-value: 0.00083 |
Identity: 28.42% |
Span: 261bp (42.7%) |
Frame: 1 |
| gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis] |
| Match: gi|23478052|gb|EAA15242.1| |
score: 45.05 |
e-value: 0.00083 |
Identity: 31.96% |
Span: 270bp (44.2%) |
Frame: 1 |
| gi|23478052|gb|EAA15242.1| peptidyl-prolyl cis-trans isomerase E-related [Plasmodium yoelii yoelii] |
| Match: gi|23490683|gb|EAA22401.1| |
score: 45.05 |
e-value: 0.00083 |
Identity: 31.87% |
Span: 264bp (43.2%) |
Frame: 1 |
| gi|23490683|gb|EAA22401.1| ribonucleoprotein homolog F21B7.26 - Arabidopsis thaliana, putative [Plasmodium yoelii yoe... |
| Match: gi|1173326|sp|P45429|RU1A_XENLA |
score: 45.05 |
e-value: 0.00083 |
Identity: 28.42% |
Span: 261bp (42.7%) |
Frame: 1 |
| gi|1173326|sp|P45429|RU1A_XENLA U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) gi|345608|pir||S30564 small... |
| Match: gi|2134155|pir||I51678 |
score: 44.67 |
e-value: 0.001 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|2134155|pir||I51678 ribonucleoprotein - African clawed frog gi|608543|gb|AAA96945.1| ribonucleoprotein |
| Match: gi|31206383|ref|XP_312143.1| |
score: 44.67 |
e-value: 3.2e-39 |
Identity: 58.97% |
Span: 114bp (18.7%) |
Frame: 2 |
| gi|31206383|ref|XP_312143.1| ENSANGP00000022192 [Anopheles gambiae] gi|21295636|gb|EAA07781.1| ENSANGP00000022192 [An... |
| Match: gi|31200003|ref|XP_308949.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 31.87% |
Span: 264bp (43.2%) |
Frame: 1 |
| gi|31200003|ref|XP_308949.1| ENSANGP00000013289 [Anopheles gambiae] gi|21292150|gb|EAA04295.1| ENSANGP00000013289 [An... |
| Match: gi|5739519|gb|AAD50508.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 30.48% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|5739519|gb|AAD50508.1| RNA-binding protein HuD [Gallus gallus] |
| Match: gi|38091386|ref|XP_122209.4| |
score: 44.28 |
e-value: 0.001 |
Identity: 33.75% |
Span: 225bp (36.8%) |
Frame: 1 |
| gi|38091386|ref|XP_122209.4| similar to Poly(A) binding protein, cytoplasmic 4, isoform 1 [Mus musculus] |
| Match: gi|38109743|gb|EAA55566.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 27.03% |
Span: 327bp (53.5%) |
Frame: 1 |
| gi|38109743|gb|EAA55566.1| hypothetical protein MG01217.4 [Magnaporthe grisea 70-15] |
| Match: gi|23271926|gb|AAH36071.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 29.52% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens] |
| Match: gi|11386163|ref|NP_068771.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 29.52% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|11386163|ref|NP_068771.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); Embryonic le... |
| Match: gi|14280325|gb|AAK57539.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 29.52% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens] |
| Match: gi|26354649|dbj|BAC40951.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus] |
| Match: gi|31560656|ref|NP_032800.2| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|31560656|ref|NP_032800.2| poly A binding protein, cytoplasmic 1; poly A binding protein 1 [Mus musculus] gi|132780... |
| Match: gi|129535|sp|P29341|PAB1_MOUSE |
score: 43.9 |
e-value: 0.002 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|129535|sp|P29341|PAB1_MOUSE Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) gi|2119041|pir||I... |
| Match: gi|19705459|ref|NP_599180.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|19705459|ref|NP_599180.1| poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus] gi|12188891|emb|CAC21554.1| p... |
| Match: gi|14280327|gb|AAK57540.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 29.52% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens] |
| Match: gi|13435438|gb|AAH04587.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus] |
| Match: gi|14280323|gb|AAK57538.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 29.52% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens] |
| Match: gi|7706326|ref|NP_057131.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 54.55% |
Span: 99bp (16.2%) |
Frame: 2 |
| gi|7706326|ref|NP_057131.1| pre-mRNA branch site protein p14; CGI-110 protein; splicing factor 3B, 14 kDa subunit [Ho... |
| Match: gi|32416524|ref|XP_328740.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 28.26% |
Span: 252bp (41.2%) |
Frame: 1 |
| gi|32416524|ref|XP_328740.1| hypothetical protein [Neurospora crassa] gi|28924315|gb|EAA33468.1| hypothetical protein... |
| Match: gi|31201221|ref|XP_309558.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 28.92% |
Span: 246bp (40.3%) |
Frame: 1 |
| gi|31201221|ref|XP_309558.1| ENSANGP00000022280 [Anopheles gambiae] gi|21293041|gb|EAA05186.1| ENSANGP00000022280 [An... |
| Match: gi|28201852|sp|Q9H361|PAB3_HUMAN |
score: 43.13 |
e-value: 0.003 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|28201852|sp|Q9H361|PAB3_HUMAN Polyadenylate-binding protein 3 (Poly(A)-binding protein 3) (PABP 3) (Testis-specifi... |
| Match: gi|13569958|ref|NP_112241.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|13569958|ref|NP_112241.1| poly(A) binding protein, cytoplasmic 3; poly(A)-binding protein-like 3; poly(A)-binding ... |
| Match: gi|37542996|ref|XP_292012.3| |
score: 43.13 |
e-value: 0.003 |
Identity: 28.57% |
Span: 246bp (40.3%) |
Frame: 1 |
| gi|37542996|ref|XP_292012.3| similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) [Homo sa... |
| Match: gi|1352709|sp|P20965|PAB1_XENLA |
score: 43.13 |
e-value: 0.003 |
Identity: 29.03% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|1352709|sp|P20965|PAB1_XENLA Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) gi|538582|pir||D... |
| Match: gi|13548328|emb|CAC35875.1| |
score: 42.74 |
e-value: 0.004 |
Identity: 37.33% |
Span: 216bp (35.4%) |
Frame: 1 |
| gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana] |
| Match: gi|23613842|ref|NP_704863.1| |
score: 42.36 |
e-value: 0.005 |
Identity: 29.73% |
Span: 213bp (34.9%) |
Frame: 1 |
| gi|23613842|ref|NP_704863.1| mRNA processing protein, putative [Plasmodium falciparum 3D7] gi|23505226|emb|CAD52006.1... |
| Match: gi|31074186|gb|AAO73304.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 34.43% |
Span: 174bp (28.5%) |
Frame: 1 |
| gi|31074186|gb|AAO73304.1| RNA-binding protein RBP-3 [Trypanosoma cruzi] gi|31074959|gb|AAP42137.1| RNA-binding prote... |
| Match: gi|34785490|gb|AAH57709.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 62.96% |
Span: 81bp (13.3%) |
Frame: 2 |
| gi|34785490|gb|AAH57709.1| MGC68842 protein [Xenopus laevis] |
| Match: gi|23508862|ref|NP_701530.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 24.72% |
Span: 261bp (42.7%) |
Frame: 1 |
| gi|23508862|ref|NP_701530.1| hypothetical protein [Plasmodium falciparum 3D7] gi|23496698|gb|AAN36254.1| hypothetical... |
| Match: gi|4759156|ref|NP_004587.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 25.26% |
Span: 270bp (44.2%) |
Frame: 1 |
| gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM... |
| Match: gi|12053297|emb|CAB66834.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 27.96% |
Span: 258bp (42.2%) |
Frame: 1 |
| gi|12053297|emb|CAB66834.1| hypothetical protein [Homo sapiens] |
| Match: gi|7673355|gb|AAF66823.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 30.68% |
Span: 243bp (39.8%) |
Frame: 1 |
| gi|7673355|gb|AAF66823.1| poly(A)-binding protein [Nicotiana tabacum] |
| Match: gi|21312912|ref|NP_080502.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 25.51% |
Span: 288bp (47.1%) |
Frame: 1 |
| gi|21312912|ref|NP_080502.1| RIKEN cDNA 4932702K14 [Mus musculus] gi|12855391|dbj|BAB30319.1| unnamed protein product... |
| Match: gi|37748043|gb|AAH59527.1| |
score: 41.59 |
e-value: 0.009 |
Identity: 28.12% |
Span: 270bp (44.2%) |
Frame: 1 |
| gi|37748043|gb|AAH59527.1| Unknown (protein for IMAGE:4201535) [Danio rerio] |
| Match: gi|15228016|ref|NP_181204.1| |
score: 41.59 |
e-value: 0.009 |
Identity: 31.11% |
Span: 264bp (43.2%) |
Frame: 1 |
| gi|15228016|ref|NP_181204.1| polyadenylate-binding protein (PABP), putative [Arabidopsis thaliana] gi|12229883|sp|Q9Z... |
| Match: gi|38111102|gb|EAA56730.1| |
score: 41.59 |
e-value: 0.009 |
Identity: 33.33% |
Span: 171bp (28.0%) |
Frame: 1 |
| gi|38111102|gb|EAA56730.1| hypothetical protein MG07085.4 [Magnaporthe grisea 70-15] |
| Match: gi|15240750|ref|NP_196346.1| |
score: 41.59 |
e-value: 0.009 |
Identity: 33.9% |
Span: 177bp (29.0%) |
Frame: 1 |
| AML4 (ARABIDOPSIS MEI2-LIKE 4); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi754... |
| Match: gi|31200451|ref|XP_309173.1| |
score: 41.59 |
e-value: 0.009 |
Identity: 29.27% |
Span: 237bp (38.8%) |
Frame: 1 |
| gi|31200451|ref|XP_309173.1| ENSANGP00000018775 [Anopheles gambiae] gi|30178557|gb|EAA04971.2| ENSANGP00000018775 [An... |
| Match: gi|6321599|ref|NP_011675.1| |
score: 41.2 |
e-value: 0.012 |
Identity: 32.26% |
Span: 177bp (29.0%) |
Frame: 1 |
| gi|6321599|ref|NP_011675.1| nuclear localization sequence binding protein; Nsr1p [Saccharomyces cerevisiae] gi|128576... |
| Match: gi|34855379|ref|XP_214845.2| |
score: 41.2 |
e-value: 0.012 |
Identity: 27.78% |
Span: 249bp (40.8%) |
Frame: 1 |
| gi|34855379|ref|XP_214845.2| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Rattus norvegicus] |
| Match: gi|253181|gb|AAB22809.1| |
score: 41.2 |
e-value: 0.012 |
Identity: 32.26% |
Span: 177bp (29.0%) |
Frame: 1 |
| gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa] |
| Match: gi|27730131|ref|XP_217884.1| |
score: 41.2 |
e-value: 0.012 |
Identity: 25.51% |
Span: 288bp (47.1%) |
Frame: 1 |
| gi|27730131|ref|XP_217884.1| similar to RIKEN cDNA 4932702K14 [Rattus norvegicus] |
| Match: gi|1633231|pdb|1FHT| |
score: 41.2 |
e-value: 0.012 |
Identity: 27.78% |
Span: 249bp (40.8%) |
Frame: 1 |
| gi|1633231|pdb|1FHT| Rna-Binding Domain Of The U1a Spliceosomal Protein U1a117, Nmr, 43 Structures |
| Match: gi|18406831|ref|NP_564759.1| |
score: 41.2 |
e-value: 0.012 |
Identity: 24.75% |
Span: 294bp (48.1%) |
Frame: 1 |
| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana] >gi30696446|ref|NP_849832.1| glycine-rich RNA-bindi... |
| Match: gi|19920866|ref|NP_609095.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 34.38% |
Span: 183bp (30.0%) |
Frame: 1 |
| gi|19920866|ref|NP_609095.1| CG11266-PB [Drosophila melanogaster] gi|24582412|ref|NP_723243.1| CG11266-PA [Drosophila... |
| Match: gi|20975278|dbj|BAB92956.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 31.82% |
Span: 189bp (30.9%) |
Frame: 1 |
| gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica] |
| Match: gi|2134153|pir||I51676 |
score: 40.82 |
e-value: 0.016 |
Identity: 30.34% |
Span: 255bp (41.7%) |
Frame: 1 |
| gi|2134153|pir||I51676 ribonucleoprotein - African clawed frog gi|608539|gb|AAA96943.1| ribonucleoprotein |
| Match: gi|20975276|dbj|BAB92955.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 31.82% |
Span: 189bp (30.9%) |
Frame: 1 |
| gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica] |
| Match: gi|18858615|ref|NP_571524.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 30.1% |
Span: 288bp (47.1%) |
Frame: 1 |
| gi|18858615|ref|NP_571524.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C); elav/huc hom... |
| Match: gi|6322195|ref|NP_012270.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 27.38% |
Span: 237bp (38.8%) |
Frame: 1 |
| gi|6322195|ref|NP_012270.1| U2 snRNP associated protein; Ist3p [Saccharomyces cerevisiae] gi|731908|sp|P40565|YIS5_YE... |
| Match: gi|18858617|ref|NP_571528.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 28.57% |
Span: 306bp (50.1%) |
Frame: 1 |
| gi|18858617|ref|NP_571528.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D); embryonic le... |
| Match: gi|24582417|ref|NP_723245.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 34.38% |
Span: 183bp (30.0%) |
Frame: 1 |
| gi|24582417|ref|NP_723245.1| CG11266-PC [Drosophila melanogaster] gi|24582419|ref|NP_723246.1| CG11266-PD [Drosophila... |
| Match: gi|18463972|gb|AAL73053.1| |
score: 40.82 |
e-value: 0.016 |
Identity: 30.1% |
Span: 288bp (47.1%) |
Frame: 1 |
| gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus] |
| Match: gi|37539825|ref|XP_067844.2| |
score: 40.82 |
e-value: 0.016 |
Identity: 26.74% |
Span: 237bp (38.8%) |
Frame: 1 |
| gi|37539825|ref|XP_067844.2| similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducib... |
| Match: gi|29841272|gb|AAP06304.1| |
score: 39.28 |
e-value: 9.7e-32 |
Identity: 62.96% |
Span: 81bp (13.3%) |
Frame: 2 |
| gi|29841272|gb|AAP06304.1| similar to GenBank Accession Number AE003563 CG13298 gene product in Drosophila melanogast... |
| Match: gi|32564829|ref|NP_493659.2| |
score: 36.19 |
e-value: 3e-33 |
Identity: 50% |
Span: 90bp (14.7%) |
Frame: 2 |
| gi|32564829|ref|NP_493659.2| RNA-binding region RNP-1 (2A389) [Caenorhabditis elegans] gi|32699564|sp|Q8ITY4|PM14_CAE... |
| Match: gi|7497730|pir||T32782 |
score: 35.81 |
e-value: 6.1e-23 |
Identity: 51.85% |
Span: 81bp (13.3%) |
Frame: 2 |
| gi|7497730|pir||T32782 hypothetical protein C50D2.5 - Caenorhabditis elegans |
| Match: gi|23508934|ref|NP_701602.1| |
score: 35.04 |
e-value: 4.9e-27 |
Identity: 55.56% |
Span: 81bp (13.3%) |
Frame: 2 |
| gi|23508934|ref|NP_701602.1| hypothetical protein, conserved [Plasmodium falciparum 3D7] gi|23496772|gb|AAN36326.1| h... |
| Match: gi|15226021|ref|NP_179093.1| |
score: 34.65 |
e-value: 1.4e-18 |
Identity: 53.85% |
Span: 78bp (12.8%) |
Frame: 2 |
| gi|15226021|ref|NP_179093.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25411583|pir||D... |
| Match: gi|38110166|gb|EAA55928.1| |
score: 25.79 |
e-value: 6.1e-24 |
Identity: 66.67% |
Span: 45bp (7.4%) |
Frame: 2 |
| gi|38110166|gb|EAA55928.1| hypothetical protein MG01579.4 [Magnaporthe grisea 70-15] |
| Match: gi|19112627|ref|NP_595835.1| |
score: 21.17 |
e-value: 1.5e-17 |
Identity: 38.89% |
Span: 54bp (8.8%) |
Frame: 2 |
| gi|19112627|ref|NP_595835.1| putative splicing factor; RNA-binding domain [Schizosaccharomyces pombe] gi|7492023|pir|... |
|
| 76 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 25 hits recorded |
| Match: At5g12190.1 |
score: 177.6 |
e-value: 3.2e-54 |
Identity: 89.58% |
Span: 288bp (47.1%) |
Frame: 1 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At2g14870.1 |
score: 80.11 |
e-value: 5.2e-20 |
Identity: 73.47% |
Span: 147bp (24.1%) |
Frame: 1 |
| At2g14870.1 68409.m01515 RNA recognition motif (RRM) - containing protein low similarity to SP|Q10572 Sex determinati... |
| Match: At5g12190.1 |
score: 51.99 |
e-value: 3.2e-54 |
Identity: 69.7% |
Span: 99bp (16.2%) |
Frame: 2 |
| At5g12190.1 68412.m01323 RNA recognition motif (RRM) - containing protein similar to SP|P52298 20 kDa nuclear cap bin... |
| Match: At2g36660.1 |
score: 41.59 |
e-value: 0.00034 |
Identity: 31.11% |
Span: 264bp (43.2%) |
Frame: 1 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
| Match: At5g07290.1 |
score: 41.59 |
e-value: 0.00034 |
Identity: 33.9% |
Span: 177bp (29.0%) |
Frame: 1 |
| At5g07290.1 68412.m00769 Meiosis protein mei2-related Mei2-like protein - Arabidopsis thaliana, EMBL:D86122 |
| Match: At1g60650.1 |
score: 41.2 |
e-value: 0.00045 |
Identity: 24.75% |
Span: 294bp (48.1%) |
Frame: 1 |
| At1g60650.1 68408.m08723 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At1g60650.2 |
score: 41.2 |
e-value: 0.00045 |
Identity: 24.75% |
Span: 294bp (48.1%) |
Frame: 1 |
| At1g60650.2 68408.m08724 glycine-rich RNA-binding protein, putative similar to RNA binding protein(RZ-1) GI:1435061 f... |
| Match: At5g64200.2 |
score: 40.05 |
e-value: 0.001 |
Identity: 29.63% |
Span: 234bp (38.3%) |
Frame: 1 |
| At5g64200.2 68412.m08081 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At5g64200.1 |
score: 40.05 |
e-value: 0.001 |
Identity: 29.63% |
Span: 234bp (38.3%) |
Frame: 1 |
| At5g64200.1 68412.m08080 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At2g42890.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 33.93% |
Span: 168bp (27.5%) |
Frame: 1 |
| At2g42890.1 68409.m04800 Meiosis protein mei2, putative |
| Match: At3g47120.1 |
score: 38.12 |
e-value: 0.004 |
Identity: 27.71% |
Span: 240bp (39.3%) |
Frame: 1 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g55460.1 |
score: 37.74 |
e-value: 0.005 |
Identity: 26.4% |
Span: 366bp (59.9%) |
Frame: 1 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At4g02430.2 |
score: 37.74 |
e-value: 0.005 |
Identity: 34.43% |
Span: 183bp (30.0%) |
Frame: 1 |
| At4g02430.2 68411.m00301 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At4g02430.1 |
score: 37.74 |
e-value: 0.005 |
Identity: 34.43% |
Span: 183bp (30.0%) |
Frame: 1 |
| At4g02430.1 68411.m00300 arginine/serine-rich splicing factor (atSRp34), putative cDNA NCBI_gi:15810292 supports a tr... |
| Match: At1g02840.2 |
score: 36.96 |
e-value: 0.008 |
Identity: 33.96% |
Span: 159bp (26.0%) |
Frame: 1 |
| At1g02840.2 68408.m08867 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.3 |
score: 36.96 |
e-value: 0.008 |
Identity: 33.96% |
Span: 159bp (26.0%) |
Frame: 1 |
| At1g02840.3 68408.m08868 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At1g02840.1 |
score: 36.96 |
e-value: 0.008 |
Identity: 33.96% |
Span: 159bp (26.0%) |
Frame: 1 |
| At1g02840.1 68408.m08866 pre-mRNA splicing factor SF2 (SR1 protein) |
| Match: At2g35410.1 |
score: 35.81 |
e-value: 0.019 |
Identity: 27.14% |
Span: 204bp (33.4%) |
Frame: 1 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At2g43410.1 |
score: 35.04 |
e-value: 0.032 |
Identity: 32.69% |
Span: 156bp (25.5%) |
Frame: 1 |
| At2g43410.1 68409.m04876 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g14870.1 |
score: 34.65 |
e-value: 5.2e-20 |
Identity: 53.85% |
Span: 78bp (12.8%) |
Frame: 2 |
| At2g14870.1 68409.m01515 RNA recognition motif (RRM) - containing protein low similarity to SP|Q10572 Sex determinati... |
| Match: At3g10400.1 |
score: 33.5 |
e-value: 0.093 |
Identity: 22.12% |
Span: 330bp (54.0%) |
Frame: 1 |
| At3g10400.1 68410.m01125 RNA recognition motif (RRM) - containing protein low similarity to splicing factor SC35 [Ara... |
| Match: At1g60000.1 |
score: 33.5 |
e-value: 0.093 |
Identity: 31.51% |
Span: 210bp (34.4%) |
Frame: 1 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At1g14340.1 |
score: 33.5 |
e-value: 0.093 |
Identity: 27.94% |
Span: 204bp (33.4%) |
Frame: 1 |
| At1g14340.1 68408.m01536 RRM-containing protein |
| Match: At4g19610.1 |
score: 33.5 |
e-value: 0.093 |
Identity: 26.09% |
Span: 234bp (38.3%) |
Frame: 1 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g16380.1 |
score: 33.5 |
e-value: 0.093 |
Identity: 23.66% |
Span: 273bp (44.7%) |
Frame: 1 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
|
