| genbank/nr [blastx] | Showing best 56 hits recorded |
| Match: gi|30697074|ref|NP_851215.1| |
score: 107.8 |
e-value: 2.6e-28 |
Identity: 71.57% |
Span: 300bp (49.4%) |
Frame: 2 |
| TAF15b (TBP-ASSOCIATED FACTOR 15b); binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidops... |
| Match: gi|34896094|ref|NP_909391.1| |
score: 107.1 |
e-value: 3.4e-28 |
Identity: 75% |
Span: 300bp (49.4%) |
Frame: 2 |
| gi|34896094|ref|NP_909391.1| B1189A09.32 [Oryza sativa (japonica cultivar-group)] gi|15528745|dbj|BAB64787.1| P0701D0... |
| Match: gi|39545916|gb|AAR28021.1| |
score: 96.67 |
e-value: 5.5e-25 |
Identity: 77.19% |
Span: 171bp (28.2%) |
Frame: 2 |
| TAF15b [Arabidopsis thaliana] |
| Match: gi|10177024|dbj|BAB10262.1| |
score: 65.08 |
e-value: 1.3e-15 |
Identity: 77.78% |
Span: 108bp (17.8%) |
Frame: 2 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|31242039|ref|XP_321450.1| |
score: 51.6 |
e-value: 9.3e-06 |
Identity: 43.1% |
Span: 174bp (28.7%) |
Frame: 2 |
| gi|31242039|ref|XP_321450.1| ENSANGP00000022179 [Anopheles gambiae] gi|30173728|gb|EAA01380.2| ENSANGP00000022179 [An... |
| Match: gi|7669490|ref|NP_053733.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|7669490|ref|NP_053733.1| Ewing sarcoma breakpoint region 1 isoform EWS-b [Homo sapiens] |
| Match: gi|30584431|gb|AAP36468.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|30584431|gb|AAP36468.1| Homo sapiens Ewing sarcoma breakpoint region 1 [synthetic construct] |
| Match: gi|16552153|dbj|BAB71252.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|16552153|dbj|BAB71252.1| unnamed protein product [Homo sapiens] |
| Match: gi|4885225|ref|NP_005234.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|4885225|ref|NP_005234.1| Ewing sarcoma breakpoint region 1 isoform EWS [Homo sapiens] gi|544261|sp|Q01844|EWS_HUMA... |
| Match: gi|12852168|dbj|BAB29301.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|12852168|dbj|BAB29301.1| unnamed protein product [Mus musculus] |
| Match: gi|16551674|dbj|BAB71145.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|16551674|dbj|BAB71145.1| unnamed protein product [Homo sapiens] |
| Match: gi|6679715|ref|NP_031994.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|6679715|ref|NP_031994.1| Ewing sarcoma homolog [Mus musculus] gi|2500583|sp|Q61545|EWS_MOUSE RNA-binding protein E... |
| Match: gi|34879031|ref|XP_237930.2| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|34879031|ref|XP_237930.2| similar to RNA-binding protein EWS [Rattus norvegicus] |
| Match: gi|15029675|gb|AAH11048.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|15029675|gb|AAH11048.1| Ewing sarcoma breakpoint region 1, isoform EWS [Homo sapiens] |
| Match: gi|12859677|dbj|BAB31732.1| |
score: 50.45 |
e-value: 2.1e-05 |
Identity: 47.17% |
Span: 156bp (25.7%) |
Frame: 2 |
| gi|12859677|dbj|BAB31732.1| unnamed protein product [Mus musculus] |
| Match: gi|34864635|ref|XP_236260.2| |
score: 50.06 |
e-value: 2.7e-05 |
Identity: 41.79% |
Span: 198bp (32.6%) |
Frame: 2 |
| gi|34864635|ref|XP_236260.2| similar to RNA-binding protein EWS [Rattus norvegicus] |
| Match: gi|33604057|gb|AAH56281.1| |
score: 49.68 |
e-value: 3.5e-05 |
Identity: 45.1% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|33604057|gb|AAH56281.1| Unknown (protein for IMAGE:6789697) [Danio rerio] |
| Match: gi|25405366|pir||C96539 |
score: 49.29 |
e-value: 4.6e-05 |
Identity: 44.78% |
Span: 198bp (32.6%) |
Frame: 2 |
| gi|25405366|pir||C96539 hypothetical protein F14I3.10 [imported] - Arabidopsis thaliana gi|5734788|gb|AAD50053.1| Sim... |
| Match: gi|18403012|ref|NP_564565.1| |
score: 49.29 |
e-value: 4.6e-05 |
Identity: 44.78% |
Span: 198bp (32.6%) |
Frame: 2 |
| gi|18403012|ref|NP_564565.1| RRM-containing RNA-binding protein, putative [Arabidopsis thaliana] gi|13605793|gb|AAK32... |
| Match: gi|34394336|dbj|BAC84891.1| |
score: 49.29 |
e-value: 4.6e-05 |
Identity: 48.28% |
Span: 171bp (28.2%) |
Frame: 2 |
| gi|34394336|dbj|BAC84891.1| RRM-containing RNA-binding protein-like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|27881957|gb|AAH44518.1| |
score: 47.75 |
e-value: 0.00013 |
Identity: 42.37% |
Span: 174bp (28.7%) |
Frame: 2 |
| gi|27881957|gb|AAH44518.1| Unknown (protein for MGC:55864) [Danio rerio] |
| Match: gi|24642434|ref|NP_727946.1| |
score: 45.82 |
e-value: 0.00051 |
Identity: 37.7% |
Span: 183bp (30.1%) |
Frame: 2 |
| gi|24642434|ref|NP_727946.1| cabeza CG3606-PA [Drosophila melanogaster] gi|22832344|gb|AAF48578.2| CG3606-PA [Drosoph... |
| Match: gi|24642436|ref|NP_523365.2| |
score: 44.67 |
e-value: 0.001 |
Identity: 37.93% |
Span: 174bp (28.7%) |
Frame: 2 |
| gi|24642436|ref|NP_523365.2| cabeza CG3606-PB [Drosophila melanogaster] gi|22832345|gb|AAN09389.1| CG3606-PB [Drosoph... |
| Match: gi|21618312|gb|AAM67362.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 67.69% |
Span: 189bp (31.1%) |
Frame: 2 |
| gi|21618312|gb|AAM67362.1| unknown [Arabidopsis thaliana] |
| Match: gi|8928004|sp|Q27294|CAZ_DROME |
score: 44.67 |
e-value: 0.001 |
Identity: 37.93% |
Span: 174bp (28.7%) |
Frame: 2 |
| gi|8928004|sp|Q27294|CAZ_DROME RNA-binding protein cabeza (Sarcoma-associated RNA-binding fly homolog) (P19) gi|10791... |
| Match: gi|41055170|ref|NP_957377.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 44.23% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|41055170|ref|NP_957377.1| similar to pigpen [Danio rerio] gi|29179510|gb|AAH49308.1| Similar to pigpen [Danio rerio] |
| Match: gi|20982845|ref|NP_631888.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|20982845|ref|NP_631888.1| pigpen; hnRNP P2; RNA-binding protein FUS; translocated in liposarcoma [Mus musculus] gi... |
| Match: gi|3582783|gb|AAC35284.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|3582783|gb|AAC35284.1| FUS/TLS protein [Homo sapiens] gi|4210363|emb|CAA50559.1| FUS gycline rich protein [Homo sa... |
| Match: gi|7440064|pir||G02127 |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|7440064|pir||G02127 fus-like protein - human (fragment) gi|1040970|gb|AAA79948.1| fus-like protein |
| Match: gi|30584649|gb|AAP36577.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|30584649|gb|AAP36577.1| Homo sapiens fusion, derived from t(12;16) malignant liposarcoma [synthetic construct] |
| Match: gi|34859348|ref|XP_228776.2| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|34859348|ref|XP_228776.2| similar to pigpen [Rattus norvegicus] |
| Match: gi|448295|prf||1916411B |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|448295|prf||1916411B TLS protein |
| Match: gi|27806887|ref|NP_776337.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|27806887|ref|NP_776337.1| fusion, derived from t(12;16) malignant liposarcoma [Bos taurus] gi|2500584|sp|Q28009|FU... |
| Match: gi|27881721|gb|AAH44319.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|27881721|gb|AAH44319.1| Fus-prov protein [Xenopus laevis] |
| Match: gi|19913512|gb|AAH26062.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|19913512|gb|AAH26062.1| Fusion (involved in t(12;16) in malignant liposarcoma) [Homo sapiens] |
| Match: gi|4826734|ref|NP_004951.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|4826734|ref|NP_004951.1| fusion (involved in t(12;16) in malignant liposarcoma); Fusion gene in myxoid liposarcoma... |
| Match: gi|26252108|gb|AAH40827.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|26252108|gb|AAH40827.1| Pigpen [Mus musculus] gi|34849597|gb|AAH58247.1| Pigpen [Mus musculus] |
| Match: gi|34481861|emb|CAD79346.1| |
score: 42.36 |
e-value: 0.006 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|34481861|emb|CAD79346.1| BBF2H7/FUS protein [Homo sapiens] |
| Match: gi|908756|gb|AAA70425.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 36.21% |
Span: 174bp (28.7%) |
Frame: 2 |
| gi|908756|gb|AAA70425.1| unknown protein |
| Match: gi|34933468|ref|XP_346276.1| |
score: 41.97 |
e-value: 0.007 |
Identity: 42.31% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|34933468|ref|XP_346276.1| similar to pigpen [Rattus norvegicus] |
| Match: gi|34896094|ref|NP_909391.1| |
score: 40.05 |
e-value: 3.4e-28 |
Identity: 78.26% |
Span: 69bp (11.4%) |
Frame: 3 |
| gi|34896094|ref|NP_909391.1| B1189A09.32 [Oryza sativa (japonica cultivar-group)] gi|15528745|dbj|BAB64787.1| P0701D0... |
| Match: gi|13874546|dbj|BAB46889.1| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|13874546|dbj|BAB46889.1| hypothetical protein [Macaca fascicularis] |
| Match: gi|28279785|gb|AAH46099.1| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|28279785|gb|AAH46099.1| TBP-associated factor 15, isoform 1 [Homo sapiens] |
| Match: gi|34872920|ref|XP_237792.2| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|34872920|ref|XP_237792.2| similar to TBP-associated factor 15 isoform 1; TAF15 RNA polymerase II, TATA box binding... |
| Match: gi|30794412|ref|NP_081703.1| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|30794412|ref|NP_081703.1| TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor; TATA box bind... |
| Match: gi|21327701|ref|NP_631961.1| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|21327701|ref|NP_631961.1| TBP-associated factor 15 isoform 1; TAF15 RNA polymerase II, TATA box binding protein (T... |
| Match: gi|4507353|ref|NP_003478.1| |
score: 40.05 |
e-value: 0.028 |
Identity: 40% |
Span: 147bp (24.2%) |
Frame: 2 |
| gi|4507353|ref|NP_003478.1| TBP-associated factor 15 isoform 2; TAF15 RNA polymerase II, TATA box binding protein (TB... |
| Match: gi|12847222|dbj|BAB27483.1| |
score: 39.66 |
e-value: 0.037 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|12847222|dbj|BAB27483.1| unnamed protein product [Mus musculus] |
| Match: gi|23956212|ref|NP_082518.1| |
score: 39.66 |
e-value: 0.037 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|23956212|ref|NP_082518.1| RIKEN cDNA 2600017A12 [Mus musculus] gi|22902415|gb|AAH37711.1| RIKEN cDNA 2600017A12 [M... |
| Match: gi|30697074|ref|NP_851215.1| |
score: 39.66 |
e-value: 2.6e-28 |
Identity: 94.12% |
Span: 51bp (8.4%) |
Frame: 3 |
| TAF15b (TBP-ASSOCIATED FACTOR 15b); binding / nucleic acid binding / nucleotide binding / zinc ion binding [Arabidops... |
| Match: gi|10177024|dbj|BAB10262.1| |
score: 39.66 |
e-value: 1.3e-15 |
Identity: 94.12% |
Span: 51bp (8.4%) |
Frame: 3 |
| unnamed protein product [Arabidopsis thaliana] |
| Match: gi|39545916|gb|AAR28021.1| |
score: 39.66 |
e-value: 5.5e-25 |
Identity: 94.12% |
Span: 51bp (8.4%) |
Frame: 3 |
| TAF15b [Arabidopsis thaliana] |
| Match: gi|39794445|gb|AAH63928.1| |
score: 38.89 |
e-value: 0.062 |
Identity: 36.54% |
Span: 153bp (25.2%) |
Frame: 2 |
| gi|39794445|gb|AAH63928.1| MGC76258 protein [Xenopus tropicalis] |
| Match: gi|1667611|gb|AAB18823.1| |
score: 38.51 |
e-value: 0.081 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|1667611|gb|AAB18823.1| Tat-SF1 [Homo sapiens] |
| Match: gi|30584025|gb|AAP36261.1| |
score: 38.51 |
e-value: 0.081 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|30584025|gb|AAP36261.1| Homo sapiens HIV TAT specific factor 1 [synthetic construct] |
| Match: gi|21361437|ref|NP_055315.2| |
score: 38.51 |
e-value: 0.081 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| gi|21361437|ref|NP_055315.2| HIV TAT specific factor 1; cofactor required for Tat activation of HIV-1 transcription [... |
|
| arabidopsis/peptide [blastx] | Showing best 6 hits recorded |
| Match: At5g58470.2 |
score: 107.8 |
e-value: 9.1e-30 |
Identity: 71.57% |
Span: 300bp (49.4%) |
Frame: 2 |
| At5g58470.2 68412.m08011 RNA/ssDNA-binding protein - like RNA/ssDNA-binding protein TAFII68, Homo sapiens, PIR:S71954 |
| Match: At5g58470.1 |
score: 107.8 |
e-value: 9.1e-30 |
Identity: 71.57% |
Span: 300bp (49.4%) |
Frame: 2 |
| At5g58470.1 68412.m08010 RNA/ssDNA-binding protein - like RNA/ssDNA-binding protein TAFII68, Homo sapiens, PIR:S71954 |
| Match: At1g50300.1 |
score: 49.29 |
e-value: 1.6e-06 |
Identity: 44.78% |
Span: 198bp (32.6%) |
Frame: 2 |
| At1g50300.1 68408.m05167 RRM-containing RNA-binding protein, putative contains similarity to RNA-binding glycine-rich... |
| Match: At5g58470.2 |
score: 39.66 |
e-value: 9.1e-30 |
Identity: 94.12% |
Span: 51bp (8.4%) |
Frame: 3 |
| At5g58470.2 68412.m08011 RNA/ssDNA-binding protein - like RNA/ssDNA-binding protein TAFII68, Homo sapiens, PIR:S71954 |
| Match: At5g58470.1 |
score: 39.66 |
e-value: 9.1e-30 |
Identity: 94.12% |
Span: 51bp (8.4%) |
Frame: 3 |
| At5g58470.1 68412.m08010 RNA/ssDNA-binding protein - like RNA/ssDNA-binding protein TAFII68, Homo sapiens, PIR:S71954 |
| Match: At2g36660.1 |
score: 33.5 |
e-value: 0.092 |
Identity: 36% |
Span: 150bp (24.7%) |
Frame: 2 |
| At2g36660.1 68409.m04071 polyadenylate-binding protein (PABP), putative |
|