| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|15231509|ref|NP_189711.1| |
score: 80.88 |
e-value: 1.3e-14 |
Identity: 35.93% |
Span: 501bp (83.6%) |
Frame: 3 |
| gi|15231509|ref|NP_189711.1| hypothetical protein [Arabidopsis thaliana] gi|8777581|dbj|BAA97099.1| retroelement pol ... |
| Match: gi|8778880|gb|AAF79879.1| |
score: 78.57 |
e-value: 6.5e-14 |
Identity: 40.91% |
Span: 330bp (55.1%) |
Frame: 3 |
| gi|8778880|gb|AAF79879.1| T7N9.5 [Arabidopsis thaliana] |
| Match: gi|15227813|ref|NP_179914.1| |
score: 77.03 |
e-value: 1.9e-13 |
Identity: 34.76% |
Span: 492bp (82.1%) |
Frame: 3 |
| gi|15227813|ref|NP_179914.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|7444418|pir||T00499 prob... |
| Match: gi|15237009|ref|NP_192837.1| |
score: 77.03 |
e-value: 1.9e-13 |
Identity: 36.94% |
Span: 324bp (54.1%) |
Frame: 3 |
| gi|15237009|ref|NP_192837.1| retrotransposon polyprotein -related [Arabidopsis thaliana] gi|7486142|pir||T04294 hypot... |
| Match: gi|22331571|ref|NP_683674.1| |
score: 75.1 |
e-value: 7.2e-13 |
Identity: 38.21% |
Span: 357bp (59.6%) |
Frame: 3 |
| gi|22331571|ref|NP_683674.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15226657|ref|NP_179198.1| |
score: 74.33 |
e-value: 1.2e-12 |
Identity: 36.75% |
Span: 351bp (58.6%) |
Frame: 3 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|7488558|pir||T14517 |
score: 71.25 |
e-value: 1e-11 |
Identity: 35.78% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|15225357|ref|NP_179636.1| |
score: 69.32 |
e-value: 3.9e-11 |
Identity: 34.26% |
Span: 324bp (54.1%) |
Frame: 3 |
| gi|15225357|ref|NP_179636.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301701|pir||E84589 pro... |
| Match: gi|15225539|ref|NP_179011.1| |
score: 68.94 |
e-value: 5.1e-11 |
Identity: 42.59% |
Span: 324bp (54.1%) |
Frame: 3 |
| gi|15225539|ref|NP_179011.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301698|pir||C84512 pro... |
| Match: gi|7487550|pir||T01956 |
score: 67.78 |
e-value: 1.1e-10 |
Identity: 32.41% |
Span: 324bp (54.1%) |
Frame: 3 |
| gi|7487550|pir||T01956 hypothetical protein T2L5.9 - Arabidopsis thaliana gi|3695393|gb|AAC62795.1| contains similari... |
| Match: gi|7486705|pir||T01879 |
score: 67.01 |
e-value: 2e-10 |
Identity: 43.59% |
Span: 225bp (37.6%) |
Frame: 3 |
| gi|7486705|pir||T01879 hypothetical protein F8M12.17 - Arabidopsis thaliana gi|3513747|gb|AAC33963.1| contains simila... |
| Match: gi|9838387|ref|NP_063999.1| |
score: 66.24 |
e-value: 3.3e-10 |
Identity: 39.76% |
Span: 249bp (41.6%) |
Frame: 3 |
| gi|9838387|ref|NP_063999.1| orf100a [Beta vulgaris] gi|30315554|ref|NP_847927.1| orf100a [Beta vulgaris subsp. vulgar... |
| Match: gi|25301682|pir||G86301 |
score: 64.31 |
e-value: 1.3e-09 |
Identity: 33.33% |
Span: 342bp (57.1%) |
Frame: 3 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|15221108|ref|NP_174874.1| |
score: 64.31 |
e-value: 1.3e-09 |
Identity: 29.59% |
Span: 507bp (84.6%) |
Frame: 3 |
| gi|15221108|ref|NP_174874.1| Ty1/copia-element polyprotein [Arabidopsis thaliana] gi|25403501|pir||H86486 protein Ty1... |
| Match: gi|27901712|gb|AAO26691.1| |
score: 63.54 |
e-value: 2.2e-09 |
Identity: 29.68% |
Span: 465bp (77.6%) |
Frame: 3 |
| gi|27901712|gb|AAO26691.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|15223588|ref|NP_176060.1| |
score: 62 |
e-value: 6.3e-09 |
Identity: 34.45% |
Span: 357bp (59.6%) |
Frame: 3 |
| gi|15223588|ref|NP_176060.1| hypothetical protein [Arabidopsis thaliana] gi|25301685|pir||E96608 probable retroelemen... |
| Match: gi|15233456|ref|NP_193182.1| |
score: 61.62 |
e-value: 8.2e-09 |
Identity: 31.58% |
Span: 342bp (57.1%) |
Frame: 3 |
| gi|15233456|ref|NP_193182.1| retrovirus-related like polyprotein [Arabidopsis thaliana] gi|7488175|pir||G71406 probab... |
| Match: gi|15225640|ref|NP_178718.1| |
score: 60.85 |
e-value: 1.4e-08 |
Identity: 36.11% |
Span: 324bp (54.1%) |
Frame: 3 |
| gi|15225640|ref|NP_178718.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301695|pir||D84481 pro... |
| Match: gi|15226650|ref|NP_179192.1| |
score: 60.85 |
e-value: 1.4e-08 |
Identity: 35.65% |
Span: 345bp (57.6%) |
Frame: 3 |
| gi|15226650|ref|NP_179192.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25411684|pir||G84534 pro... |
| Match: gi|15236074|ref|NP_193475.1| |
score: 60.46 |
e-value: 1.8e-08 |
Identity: 45.59% |
Span: 204bp (34.1%) |
Frame: 3 |
| gi|15236074|ref|NP_193475.1| retrotransposon like protein [Arabidopsis thaliana] gi|7444421|pir||A71444 probable LTR ... |
| Match: gi|15218006|ref|NP_176154.1| |
score: 58.92 |
e-value: 5.3e-08 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| gi|15218006|ref|NP_176154.1| polyprotein -related [Arabidopsis thaliana] gi|14475941|gb|AAK62788.1| polyprotein, puta... |
| Match: gi|15217982|ref|NP_176146.1| |
score: 58.92 |
e-value: 5.3e-08 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| gi|15217982|ref|NP_176146.1| polyprotein -related [Arabidopsis thaliana] gi|14475946|gb|AAK62793.1| polyprotein, puta... |
| Match: gi|4996361|dbj|BAA78423.1| |
score: 58.92 |
e-value: 5.3e-08 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|25301703|pir||T52436 |
score: 58.92 |
e-value: 5.3e-08 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| gi|25301703|pir||T52436 RF28 protein - Arabidopsis thaliana retrotransposon (fragment) gi|6520206|dbj|BAA87949.1| re... |
| Match: gi|4996365|dbj|BAA78425.1| |
score: 58.54 |
e-value: 6.9e-08 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|8843739|dbj|BAA97287.1| |
score: 58.15 |
e-value: 9.1e-08 |
Identity: 35.19% |
Span: 324bp (54.1%) |
Frame: 3 |
| retroelement pol polyprotein-like [Arabidopsis thaliana] |
| Match: gi|25402887|pir||E86327 |
score: 58.15 |
e-value: 9.1e-08 |
Identity: 30.63% |
Span: 333bp (55.6%) |
Frame: 3 |
| gi|25402887|pir||E86327 protein F18O14.19 [imported] - Arabidopsis thaliana gi|8778419|gb|AAF79427.1| F18O14.19 [Arab... |
| Match: gi|25411253|pir||A84480 |
score: 57 |
e-value: 2e-07 |
Identity: 45.45% |
Span: 231bp (38.6%) |
Frame: 3 |
| gi|25411253|pir||A84480 probable retroelement pol polyprotein [imported] - Arabidopsis thaliana gi|4063762|gb|AAC9846... |
| Match: gi|7485134|pir||E71436 |
score: 56.22 |
e-value: 3.4e-07 |
Identity: 28.48% |
Span: 456bp (76.1%) |
Frame: 3 |
| gi|7485134|pir||E71436 hypothetical protein - Arabidopsis thaliana |
| Match: gi|15235901|ref|NP_193419.1| |
score: 56.22 |
e-value: 3.4e-07 |
Identity: 28.48% |
Span: 456bp (76.1%) |
Frame: 3 |
| gi|15235901|ref|NP_193419.1| retrotransposon like protein [Arabidopsis thaliana] gi|25301691|pir||B85188 retrotranspo... |
| Match: gi|12039328|gb|AAG46116.1| |
score: 54.68 |
e-value: 1e-06 |
Identity: 34.86% |
Span: 318bp (53.1%) |
Frame: 3 |
| gi|12039328|gb|AAG46116.1| putative copia-like retrotransposon polyprotein [Oryza sativa] |
| Match: gi|37530764|ref|NP_919684.1| |
score: 54.68 |
e-value: 1e-06 |
Identity: 34.86% |
Span: 318bp (53.1%) |
Frame: 3 |
| gi|37530764|ref|NP_919684.1| putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)] gi|20042923|gb|... |
| Match: gi|37536522|ref|NP_922563.1| |
score: 54.68 |
e-value: 1e-06 |
Identity: 34.86% |
Span: 318bp (53.1%) |
Frame: 3 |
| gi|37536522|ref|NP_922563.1| putative gag-pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|13310887|gb|AAG... |
| Match: gi|2865427|gb|AAC02666.1| |
score: 54.3 |
e-value: 1.3e-06 |
Identity: 30.37% |
Span: 393bp (65.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|2865431|gb|AAC02669.1| |
score: 54.3 |
e-value: 1.3e-06 |
Identity: 30.37% |
Span: 393bp (65.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|7522104|pir||T31353 |
score: 53.91 |
e-value: 1.7e-06 |
Identity: 29.86% |
Span: 420bp (70.1%) |
Frame: 3 |
| gi|7522104|pir||T31353 polyprotein - Arabidopsis arenosa Evelknievel retrotransposon (fragment) gi|2865437|gb|AAC0267... |
| Match: gi|7487068|pir||T04760 |
score: 53.53 |
e-value: 2.2e-06 |
Identity: 36.08% |
Span: 291bp (48.6%) |
Frame: 3 |
| gi|7487068|pir||T04760 hypothetical protein T16H5.150 - Arabidopsis thaliana (fragment) gi|25301705|pir||D85224 prob... |
| Match: gi|37534632|ref|NP_921618.1| |
score: 53.14 |
e-value: 2.9e-06 |
Identity: 31.88% |
Span: 405bp (67.6%) |
Frame: 3 |
| gi|37534632|ref|NP_921618.1| putative pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|31432250|gb|AAP5390... |
| Match: gi|2865424|gb|AAC02664.1| |
score: 52.37 |
e-value: 5e-06 |
Identity: 29.63% |
Span: 393bp (65.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15223470|ref|NP_174048.1| |
score: 52.37 |
e-value: 5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| gi|15223470|ref|NP_174048.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|9802525|gb|AAF99727.1| |
score: 52.37 |
e-value: 5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| gi|9802525|gb|AAF99727.1| F17L21.7 [Arabidopsis thaliana] |
| Match: gi|4996369|dbj|BAA78427.1| |
score: 51.6 |
e-value: 8.5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996367|dbj|BAA78426.1| |
score: 51.6 |
e-value: 8.5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|4996363|dbj|BAA78424.1| |
score: 51.6 |
e-value: 8.5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|15236226|ref|NP_192205.1| |
score: 51.6 |
e-value: 8.5e-06 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| gi|15236226|ref|NP_192205.1| polyprotein of LTR transposon -related [Arabidopsis thaliana] gi|7444420|pir||T01397 LTR... |
| Match: gi|29423282|gb|AAO73529.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 32.79% |
Span: 354bp (59.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|15235834|ref|NP_192523.1| |
score: 51.22 |
e-value: 1.1e-05 |
Identity: 37.65% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|15235834|ref|NP_192523.1| polyprotein -related [Arabidopsis thaliana] gi|25301678|pir||C85077 probable polyprotein... |
| Match: gi|15219414|ref|NP_175090.1| |
score: 50.45 |
e-value: 1.9e-05 |
Identity: 27.11% |
Span: 477bp (79.6%) |
Frame: 3 |
| gi|15219414|ref|NP_175090.1| polyprotein -related [Arabidopsis thaliana] gi|13876509|gb|AAK43485.1| polyprotein, puta... |
| Match: gi|15223634|ref|NP_176077.1| |
score: 50.45 |
e-value: 1.9e-05 |
Identity: 33.33% |
Span: 234bp (39.1%) |
Frame: 3 |
| gi|15223634|ref|NP_176077.1| polyprotein -related [Arabidopsis thaliana] gi|25301686|pir||F96610 probable polyprotein... |
| Match: gi|15228150|ref|NP_178529.1| |
score: 50.06 |
e-value: 2.5e-05 |
Identity: 44.23% |
Span: 156bp (26.0%) |
Frame: 3 |
| gi|15228150|ref|NP_178529.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25411082|pir||B84458 pro... |
| Match: gi|29423276|gb|AAO73525.1| |
score: 50.06 |
e-value: 2.5e-05 |
Identity: 35.23% |
Span: 264bp (44.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|3777527|gb|AAC64917.1| |
score: 50.06 |
e-value: 2.5e-05 |
Identity: 35.23% |
Span: 264bp (44.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|31197203|ref|XP_307549.1| |
score: 49.68 |
e-value: 3.2e-05 |
Identity: 32% |
Span: 276bp (46.1%) |
Frame: 3 |
| gi|31197203|ref|XP_307549.1| ENSANGP00000024310 [Anopheles gambiae] gi|30179152|gb|EAA45621.1| ENSANGP00000024310 [An... |
| Match: gi|31212673|ref|XP_315321.1| |
score: 49.68 |
e-value: 3.2e-05 |
Identity: 28.46% |
Span: 354bp (59.1%) |
Frame: 3 |
| gi|31212673|ref|XP_315321.1| ENSANGP00000018030 [Anopheles gambiae] gi|21298571|gb|EAA10716.1| ENSANGP00000018030 [An... |
| Match: gi|37531000|ref|NP_919802.1| |
score: 49.29 |
e-value: 4.2e-05 |
Identity: 31.19% |
Span: 312bp (52.1%) |
Frame: 3 |
| gi|37531000|ref|NP_919802.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] gi|16519476|gb|AAL25185.1|... |
| Match: gi|10177485|dbj|BAB10876.1| |
score: 48.91 |
e-value: 5.5e-05 |
Identity: 34.48% |
Span: 249bp (41.6%) |
Frame: 3 |
| polyprotein [Arabidopsis thaliana] |
| Match: gi|29423270|gb|AAO73521.1| |
score: 48.14 |
e-value: 9.4e-05 |
Identity: 34.09% |
Span: 264bp (44.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|29423273|gb|AAO73523.1| |
score: 48.14 |
e-value: 9.4e-05 |
Identity: 34.09% |
Span: 264bp (44.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|29423279|gb|AAO73527.1| |
score: 48.14 |
e-value: 9.4e-05 |
Identity: 34.09% |
Span: 264bp (44.1%) |
Frame: 3 |
| gag-pol polyprotein [Glycine max] |
| Match: gi|15222522|ref|NP_177159.1| |
score: 48.14 |
e-value: 9.4e-05 |
Identity: 37.31% |
Span: 201bp (33.6%) |
Frame: 3 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|31229006|ref|XP_318153.1| |
score: 48.14 |
e-value: 9.4e-05 |
Identity: 30.7% |
Span: 318bp (53.1%) |
Frame: 3 |
| gi|31229006|ref|XP_318153.1| ENSANGP00000020695 [Anopheles gambiae] gi|30175115|gb|EAA13154.2| ENSANGP00000020695 [An... |
| Match: gi|18568272|gb|AAL76004.1| |
score: 47.37 |
e-value: 0.00016 |
Identity: 29.09% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|18568272|gb|AAL76004.1| putative gag-pol polyprotein [Zea mays] |
| Match: gi|38344409|emb|CAD40008.2| |
score: 46.98 |
e-value: 0.00021 |
Identity: 33.68% |
Span: 252bp (42.1%) |
Frame: 3 |
| gi|38344409|emb|CAD40008.2| OSJNBb0052B05.11 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7444442|pir||T02087 |
score: 46.98 |
e-value: 0.00021 |
Identity: 30.09% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|7444442|pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retr... |
| Match: gi|13793973|gb|AAK12626.1| |
score: 46.21 |
e-value: 0.00036 |
Identity: 32.54% |
Span: 354bp (59.1%) |
Frame: 3 |
| gi|13793973|gb|AAK12626.1| unknown protein [Aedes aegypti] |
| Match: gi|33113964|gb|AAP94586.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 37.23% |
Span: 270bp (45.1%) |
Frame: 3 |
| putative retrotransposon RIRE1 poly protein [Zea mays] |
| Match: gi|25301711|pir||E96624 |
score: 45.82 |
e-value: 0.00047 |
Identity: 31.4% |
Span: 249bp (41.6%) |
Frame: 3 |
| gi|25301711|pir||E96624 hypothetical protein T2K10.7 [imported] - Arabidopsis thaliana gi|4249381|gb|AAD14478.1| Stro... |
| Match: gi|34914532|ref|NP_918613.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 30.53% |
Span: 273bp (45.6%) |
Frame: 3 |
| gi|34914532|ref|NP_918613.1| polyprotein [Oryza sativa (japonica cultivar-group)] gi|22093573|dbj|BAC06870.1| polypro... |
| Match: gi|31196823|ref|XP_307359.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 26.53% |
Span: 273bp (45.6%) |
Frame: 3 |
| gi|31196823|ref|XP_307359.1| ENSANGP00000013600 [Anopheles gambiae] gi|21290956|gb|EAA03101.1| ENSANGP00000013600 [An... |
| Match: gi|14091847|gb|AAK53850.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 31.53% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|14091847|gb|AAK53850.1| Putative retroelement [Oryza sativa] |
| Match: gi|22328565|ref|NP_680677.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 26.13% |
Span: 333bp (55.6%) |
Frame: 3 |
| gi|22328565|ref|NP_680677.1| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|14702024|gb|AAK72274.1| |
score: 45.82 |
e-value: 0.00047 |
Identity: 31.53% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|14702024|gb|AAK72274.1| putative polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22330334|ref|NP_176210.2| |
score: 45.82 |
e-value: 0.00047 |
Identity: 31.4% |
Span: 249bp (41.6%) |
Frame: 3 |
| gi|22330334|ref|NP_176210.2| polyprotein -related [Arabidopsis thaliana] |
| Match: gi|31208353|ref|XP_313143.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 32.99% |
Span: 270bp (45.1%) |
Frame: 3 |
| gi|31208353|ref|XP_313143.1| ENSANGP00000010203 [Anopheles gambiae] gi|30177117|gb|EAA44742.1| ENSANGP00000010203 [An... |
| Match: gi|31211285|ref|XP_314612.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 32.99% |
Span: 270bp (45.1%) |
Frame: 3 |
| gi|31211285|ref|XP_314612.1| ENSANGP00000019260 [Anopheles gambiae] gi|30176422|gb|EAA10021.2| ENSANGP00000019260 [An... |
| Match: gi|18378607|gb|AAL68641.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 27.93% |
Span: 327bp (54.6%) |
Frame: 3 |
| gi|18378607|gb|AAL68641.1| polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31208351|ref|XP_313142.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 32.99% |
Span: 270bp (45.1%) |
Frame: 3 |
| gi|31208351|ref|XP_313142.1| ENSANGP00000013223 [Anopheles gambiae] gi|21296436|gb|EAA08581.1| ENSANGP00000013223 [An... |
| Match: gi|31236867|ref|XP_319490.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 32.26% |
Span: 264bp (44.1%) |
Frame: 3 |
| gi|31236867|ref|XP_319490.1| ENSANGP00000020198 [Anopheles gambiae] gi|21302348|gb|EAA14493.1| ENSANGP00000020198 [An... |
| Match: gi|31223753|ref|XP_317348.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 30.69% |
Span: 288bp (48.1%) |
Frame: 3 |
| gi|31223753|ref|XP_317348.1| ENSANGP00000010535 [Anopheles gambiae] gi|31243097|ref|XP_321983.1| ENSANGP00000012118 [... |
| Match: gi|31241505|ref|XP_321183.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 30.69% |
Span: 288bp (48.1%) |
Frame: 3 |
| gi|31241505|ref|XP_321183.1| ENSANGP00000020845 [Anopheles gambiae] gi|30173621|gb|EAA01482.2| ENSANGP00000020845 [An... |
| Match: gi|31197457|ref|XP_307676.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 30.69% |
Span: 288bp (48.1%) |
Frame: 3 |
| gi|31197457|ref|XP_307676.1| ENSANGP00000016382 [Anopheles gambiae] gi|30179103|gb|EAA03471.2| ENSANGP00000016382 [An... |
| Match: gi|31197717|ref|XP_307806.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 30.51% |
Span: 330bp (55.1%) |
Frame: 3 |
| gi|31197717|ref|XP_307806.1| ENSANGP00000018052 [Anopheles gambiae] gi|21291452|gb|EAA03597.1| ENSANGP00000018052 [An... |
| Match: gi|31211283|ref|XP_314611.1| |
score: 45.44 |
e-value: 0.00061 |
Identity: 32.99% |
Span: 270bp (45.1%) |
Frame: 3 |
| gi|31211283|ref|XP_314611.1| ENSANGP00000023175 [Anopheles gambiae] gi|30176423|gb|EAA44407.1| ENSANGP00000023175 [An... |
| Match: gi|29126367|gb|AAO66559.1| |
score: 45.05 |
e-value: 0.00079 |
Identity: 32.63% |
Span: 252bp (42.1%) |
Frame: 3 |
| gi|29126367|gb|AAO66559.1| putative copia-type pol polyprotein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37533064|ref|NP_920834.1| |
score: 45.05 |
e-value: 0.00079 |
Identity: 27.84% |
Span: 291bp (48.6%) |
Frame: 3 |
| gi|37533064|ref|NP_920834.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|15451594|gb|AAK98718.1... |
| Match: gi|31230136|ref|XP_318344.1| |
score: 45.05 |
e-value: 0.00079 |
Identity: 32.65% |
Span: 270bp (45.1%) |
Frame: 3 |
| gi|31230136|ref|XP_318344.1| ENSANGP00000022544 [Anopheles gambiae] gi|30174947|gb|EAA43691.1| ENSANGP00000022544 [An... |
| Match: gi|37530906|ref|NP_919755.1| |
score: 44.67 |
e-value: 0.001 |
Identity: 28.57% |
Span: 294bp (49.1%) |
Frame: 3 |
| gi|37530906|ref|NP_919755.1| putative copia-type pol polyprotein [Oryza sativa (japonica cultivar-group)] gi|18642687... |
| Match: gi|23928444|gb|AAN40030.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 30.14% |
Span: 219bp (36.6%) |
Frame: 3 |
| putative gag-pol polyprotein [Zea mays] |
| Match: gi|37531552|ref|NP_920078.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 27.59% |
Span: 261bp (43.6%) |
Frame: 3 |
| gi|37531552|ref|NP_920078.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|31430456|gb|AAP52365.1... |
| Match: gi|31415949|gb|AAP50969.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 28.57% |
Span: 231bp (38.6%) |
Frame: 3 |
| gi|31415949|gb|AAP50969.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22711551|gb|AAM01150.2| |
score: 44.28 |
e-value: 0.001 |
Identity: 27.59% |
Span: 261bp (43.6%) |
Frame: 3 |
| gi|22711551|gb|AAM01150.2| Putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22711567|gb|AAM08852.2| ... |
| Match: gi|31229831|ref|XP_318291.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 26.47% |
Span: 282bp (47.1%) |
Frame: 3 |
| gi|31229831|ref|XP_318291.1| ENSANGP00000022019 [Anopheles gambiae] gi|21301337|gb|EAA13482.1| ENSANGP00000022019 [An... |
| Match: gi|30690233|ref|NP_850865.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 24.14% |
Span: 339bp (56.6%) |
Frame: 3 |
| gi|30690233|ref|NP_850865.1| gag-pol polyprotein (Ty1_Copia-element) [Glycine max] -related (GB:AAC64917) [Arabidops... |
| Match: gi|31196301|ref|XP_307098.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|31196301|ref|XP_307098.1| ENSANGP00000023891 [Anopheles gambiae] gi|30179370|gb|EAA45753.1| ENSANGP00000023891 [An... |
| Match: gi|31228946|ref|XP_318140.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|31228946|ref|XP_318140.1| ENSANGP00000017810 [Anopheles gambiae] gi|30175106|gb|EAA13323.2| ENSANGP00000017810 [An... |
| Match: gi|31196961|ref|XP_307428.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|31196961|ref|XP_307428.1| ENSANGP00000022620 [Anopheles gambiae] gi|31213021|ref|XP_315454.1| ENSANGP00000014216 [... |
| Match: gi|31197747|ref|XP_307821.1| |
score: 43.9 |
e-value: 0.002 |
Identity: 30% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|31197747|ref|XP_307821.1| ENSANGP00000024758 [Anopheles gambiae] gi|30179030|gb|EAA45563.1| ENSANGP00000024758 [An... |
| Match: gi|38345875|emb|CAE03660.2| |
score: 43.9 |
e-value: 0.002 |
Identity: 31.46% |
Span: 264bp (44.1%) |
Frame: 3 |
| gi|38345875|emb|CAE03660.2| OSJNBa0042N22.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|6642775|gb|AAF20282.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 25% |
Span: 315bp (52.6%) |
Frame: 3 |
| gi|6642775|gb|AAF20282.1| gag-pol polyprotein [Vitis vinifera] |
| Match: gi|31204713|ref|XP_311305.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 30% |
Span: 255bp (42.6%) |
Frame: 3 |
| gi|31204713|ref|XP_311305.1| ENSANGP00000017676 [Anopheles gambiae] gi|21294774|gb|EAA06919.1| ENSANGP00000017676 [An... |
|
| 105 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 51 hits recorded |
| Match: At3g31023.1 |
score: 80.88 |
e-value: 4.9e-16 |
Identity: 35.93% |
Span: 501bp (83.6%) |
Frame: 3 |
| At3g31023.1 68410.m03672 hypothetical protein |
| Match: At4g10990.1 |
score: 77.03 |
e-value: 7.1e-15 |
Identity: 36.94% |
Span: 324bp (54.1%) |
Frame: 3 |
| At4g10990.1 68411.m01615 retrotransposon polyprotein -related various predicted LTR retrotransposons, Arabidopsisthal... |
| Match: At2g23330.1 |
score: 77.03 |
e-value: 7.1e-15 |
Identity: 34.76% |
Span: 492bp (82.1%) |
Frame: 3 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At3g43955.1 |
score: 75.1 |
e-value: 2.7e-14 |
Identity: 38.21% |
Span: 357bp (59.6%) |
Frame: 3 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At2g16000.1 |
score: 74.33 |
e-value: 4.6e-14 |
Identity: 36.75% |
Span: 351bp (58.6%) |
Frame: 3 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At2g20460.1 |
score: 69.32 |
e-value: 1.5e-12 |
Identity: 34.26% |
Span: 324bp (54.1%) |
Frame: 3 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At2g13940.1 |
score: 68.94 |
e-value: 1.9e-12 |
Identity: 42.59% |
Span: 324bp (54.1%) |
Frame: 3 |
| At2g13940.1 68409.m01403 retroelement pol polyprotein -related contains a Zn-finger CCHC type domain (prosite:QDOC501... |
| Match: At1g36620.1 |
score: 64.31 |
e-value: 4.8e-11 |
Identity: 29.59% |
Span: 507bp (84.6%) |
Frame: 3 |
| At1g36620.1 68408.m04146 Ty1/copia-element polyprotein |
| Match: At1g56675.1 |
score: 62 |
e-value: 2.4e-10 |
Identity: 34.45% |
Span: 357bp (59.6%) |
Frame: 3 |
| At1g56675.1 68408.m05976 hypothetical protein similar to putative retroelement pol polyprotein GI:6850344 from [Arabi... |
| Match: At4g14460.1 |
score: 61.62 |
e-value: 3.1e-10 |
Identity: 31.58% |
Span: 342bp (57.1%) |
Frame: 3 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At2g07010.1 |
score: 60.85 |
e-value: 5.3e-10 |
Identity: 36.11% |
Span: 324bp (54.1%) |
Frame: 3 |
| At2g07010.1 68409.m00716 retroelement pol polyprotein -related |
| Match: At2g15920.1 |
score: 60.85 |
e-value: 5.3e-10 |
Identity: 35.65% |
Span: 345bp (57.6%) |
Frame: 3 |
| At2g15920.1 68409.m01638 retroelement pol polyprotein -related contains a CCHC-type Zn-finger |
| Match: At4g17450.1 |
score: 60.46 |
e-value: 6.9e-10 |
Identity: 45.59% |
Span: 204bp (34.1%) |
Frame: 3 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At1g59265.1 |
score: 58.92 |
e-value: 2e-09 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| At1g59265.1 68408.m06119 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At1g58889.1 |
score: 58.92 |
e-value: 2e-09 |
Identity: 32.23% |
Span: 342bp (57.1%) |
Frame: 3 |
| At1g58889.1 68408.m06107 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At4g16870.1 |
score: 56.22 |
e-value: 1.3e-08 |
Identity: 28.48% |
Span: 456bp (76.1%) |
Frame: 3 |
| At4g16870.1 68411.m02317 retrotransposon like protein |
| Match: At1g27285.1 |
score: 52.37 |
e-value: 1.9e-07 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| At1g27285.1 68408.m03015 polyprotein -related similar to GB:AAC02666 |
| Match: At4g02960.1 |
score: 51.6 |
e-value: 3.2e-07 |
Identity: 29.82% |
Span: 333bp (55.6%) |
Frame: 3 |
| At4g02960.1 68411.m00365 polyprotein of LTR transposon -related similar to A. thaliana polyprotein, GenBank accession... |
| Match: At4g07810.1 |
score: 51.22 |
e-value: 4.2e-07 |
Identity: 37.65% |
Span: 255bp (42.6%) |
Frame: 3 |
| At4g07810.1 68411.m01111 polyprotein -related |
| Match: At1g44510.1 |
score: 50.45 |
e-value: 7.1e-07 |
Identity: 27.11% |
Span: 477bp (79.6%) |
Frame: 3 |
| At1g44510.1 68408.m04686 polyprotein -related similar to polyprotein GI:4996367 from [Arabidopsis thaliana] |
| Match: At1g57640.1 |
score: 50.45 |
e-value: 7.1e-07 |
Identity: 33.33% |
Span: 234bp (39.1%) |
Frame: 3 |
| At1g57640.1 68408.m05995 polyprotein -related similar to polyprotein GI:4996365 from [Arabidopsis thaliana] |
| Match: At2g04490.1 |
score: 50.06 |
e-value: 9.3e-07 |
Identity: 44.23% |
Span: 156bp (26.0%) |
Frame: 3 |
| At2g04490.1 68409.m00404 retroelement pol polyprotein -related |
| Match: At1g70010.1 |
score: 48.14 |
e-value: 3.5e-06 |
Identity: 37.31% |
Span: 201bp (33.6%) |
Frame: 3 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At4g11375.1 |
score: 45.82 |
e-value: 1.7e-05 |
Identity: 26.13% |
Span: 333bp (55.6%) |
Frame: 3 |
| At4g11375.1 68411.m01659 polyprotein -related temporary automated functional assignment |
| Match: At1g60020.1 |
score: 45.82 |
e-value: 1.7e-05 |
Identity: 31.4% |
Span: 249bp (41.6%) |
Frame: 3 |
| At1g60020.1 68408.m06198 polyprotein -related similar to polyprotein GI:2865437 from [Arabidopsis arenosa] |
| Match: At5g26618.1 |
score: 43.9 |
e-value: 6.6e-05 |
Identity: 24.14% |
Span: 339bp (56.6%) |
Frame: 3 |
| At5g26618.1 68412.m02880 gag-pol polyprotein (Ty1_Copia-element) [Glycine max] -related (GB:AAC64917) temporary gene... |
| Match: At2g07420.1 |
score: 43.13 |
e-value: 0.00011 |
Identity: 39.44% |
Span: 213bp (35.6%) |
Frame: 3 |
| At2g07420.1 68409.m00757 retroelement pol polyprotein -related contains weak zinc-finger domains |
| Match: At2g15650.1 |
score: 43.13 |
e-value: 0.00011 |
Identity: 22.77% |
Span: 294bp (49.1%) |
Frame: 3 |
| At2g15650.1 68409.m01606 retroelement pol polyprotein -related |
| Match: At2g05930.1 |
score: 42.74 |
e-value: 0.00015 |
Identity: 35.23% |
Span: 264bp (44.1%) |
Frame: 3 |
| At2g05930.1 68409.m00575 copia-related retroelement pol polyprotein |
| Match: At2g06950.1 |
score: 42.36 |
e-value: 0.00019 |
Identity: 28.57% |
Span: 327bp (54.6%) |
Frame: 3 |
| At2g06950.1 68409.m00709 retroelement pol polyprotein -related |
| Match: At1g53810.1 |
score: 41.97 |
e-value: 0.00025 |
Identity: 27.68% |
Span: 327bp (54.6%) |
Frame: 3 |
| At1g53810.1 68408.m05618 hypothetical protein similar to putative retroelement pol polyprotein GI:3779021 from [Arabi... |
| Match: At3g29775.1 |
score: 41.2 |
e-value: 0.00043 |
Identity: 24.51% |
Span: 297bp (49.6%) |
Frame: 3 |
| At3g29775.1 68410.m03476 Ty1/Copia-type retroelement polyprotein similar to gag-pol polyprotein GB:AAC64917 GI:377752... |
| Match: At4g04420.1 |
score: 40.82 |
e-value: 0.00056 |
Identity: 34.09% |
Span: 264bp (44.1%) |
Frame: 3 |
| At4g04420.1 68411.m00562 transposon protein -related |
| Match: At4g28900.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 26.96% |
Span: 336bp (56.1%) |
Frame: 3 |
| At4g28900.1 68411.m03763 expressed protein retrofit - Oryza longistaminata, PID:g2586082 |
| Match: At4g27210.1 |
score: 38.12 |
e-value: 0.004 |
Identity: 26.79% |
Span: 327bp (54.6%) |
Frame: 3 |
| At4g27210.1 68411.m03557 hypothetical protein Hopscotch retrotransposon, Zea mays, PID:g531389 |
| Match: At4g09455.1 |
score: 36.96 |
e-value: 0.008 |
Identity: 26.79% |
Span: 327bp (54.6%) |
Frame: 3 |
| At4g09455.1 68411.m01404 reverse transcriptase -related temporary automated functional assignment |
| Match: At1g31210.1 |
score: 36.96 |
e-value: 0.008 |
Identity: 26.79% |
Span: 327bp (54.6%) |
Frame: 3 |
| At1g31210.1 68408.m03460 reverse transcriptase -related strong similarity to a multitude of putative reverse transcri... |
| Match: At3g21020.1 |
score: 36.58 |
e-value: 0.011 |
Identity: 23.53% |
Span: 294bp (49.1%) |
Frame: 3 |
| At3g21020.1 68410.m02409 expressed protein similar to putative retroelement pol polyprotein GB:AAD17409 from [Arabid... |
| Match: At1g43886.1 |
score: 35.81 |
e-value: 0.018 |
Identity: 27.43% |
Span: 327bp (54.6%) |
Frame: 3 |
| At1g43886.1 68408.m04631 polyprotein -related similar to polyprotein GI:4996365 from (Arabidopsis thaliana) |
| Match: At1g33813.1 |
score: 35.81 |
e-value: 0.018 |
Identity: 26.74% |
Span: 234bp (39.1%) |
Frame: 3 |
| At1g33813.1 68408.m03791 gag-pol polyprotein -related similar to gag-pol polyprotein GB:AAF20282 (Vitis vinifera); co... |
| Match: At1g47360.1 |
score: 35.42 |
e-value: 0.024 |
Identity: 29.55% |
Span: 252bp (42.1%) |
Frame: 3 |
| At1g47360.1 68408.m04804 polyprotein -related similar to polyprotein GB:CAA31653 GI:16534 from [Arabidopsis thaliana] |
| Match: At4g10690.1 |
score: 35.42 |
e-value: 0.024 |
Identity: 25.89% |
Span: 327bp (54.6%) |
Frame: 3 |
| At4g10690.1 68411.m01580 retrotransposon like protein copia-like retrotransposon Hopscotch polyprotein - Zea mays,PID... |
| Match: At2g17490.1 |
score: 35.04 |
e-value: 0.031 |
Identity: 24% |
Span: 291bp (48.6%) |
Frame: 3 |
| At2g17490.1 68409.m01821 retroelement pol polyprotein -related |
| Match: At3g61330.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At3g61330.1 68410.m06339 copia-type polyprotein copia polyprotein - Drosophila melanogaster, PIR:OFFFCP |
| Match: At1g48710.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At1g48710.1 68408.m04991 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from [Arabidops... |
| Match: At1g11265.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At1g11265.1 68408.m01163 copia-type polyprotein identical to copia-type polyprotein GB:CAB71063 GI:6850900 from [Arab... |
| Match: At1g21945.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At1g21945.1 68408.m02483 polyprotein -related similar to gag-pol polyprotein GB:AAC64917 GI:3777527 from [Glycine max] |
| Match: At3g59720.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At3g59720.1 68410.m06158 copia-type reverse transcriptase-related protein several reverse transcriptases |
| Match: At1g58140.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 27.5% |
Span: 228bp (38.1%) |
Frame: 3 |
| At1g58140.1 68408.m06045 copia-type polyprotein -related similar to copia-type polyprotein GI:6850900 from (Arabidops... |
| Match: At3g60170.1 |
score: 34.27 |
e-value: 0.053 |
Identity: 24.49% |
Span: 285bp (47.6%) |
Frame: 3 |
| At3g60170.1 68410.m06211 hypothetical protein several retrotransposon polyproteins |
| Match: At4g09425.1 |
score: 33.5 |
e-value: 0.09 |
Identity: 30.86% |
Span: 231bp (38.6%) |
Frame: 3 |
| At4g09425.1 68411.m01400 retroelement pol polyprotein -related temporary automated functional assignment |
|
