| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|4165154|gb|AAD08711.1| |
score: 262 |
e-value: 2e-68 |
Identity: 90.85% |
Span: 426bp (71.2%) |
Frame: 2 |
| topoisomerase I [Nicotiana tabacum] >gi14626487|gb|AAK69776.1| topoisomerase I [Nicotiana tabacum] |
| Match: gi|187369229|dbj|BAG31375.1| |
score: 251 |
e-value: 4e-65 |
Identity: 77.22% |
Span: 474bp (79.3%) |
Frame: 2 |
| topoisomerase I [Ophiorrhiza japonica] |
| Match: gi|5326994|emb|CAB46363.1| |
score: 246 |
e-value: 8e-64 |
Identity: 75.32% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase I [Daucus carota] |
| Match: gi|187369227|dbj|BAG31374.1| |
score: 245 |
e-value: 2e-63 |
Identity: 75.32% |
Span: 474bp (79.3%) |
Frame: 2 |
| topoisomerase I [Ophiorrhiza liukiuensis] |
| Match: gi|187369233|dbj|BAG31377.1| |
score: 243 |
e-value: 7e-63 |
Identity: 75% |
Span: 474bp (79.3%) |
Frame: 2 |
| topoisomerase I [Catharanthus roseus] |
| Match: gi|187369225|dbj|BAG31373.1| |
score: 243 |
e-value: 9e-63 |
Identity: 75.95% |
Span: 474bp (79.3%) |
Frame: 2 |
| topoisomerase I [Ophiorrhiza pumila] |
| Match: gi|187369231|dbj|BAG31376.1| |
score: 240 |
e-value: 6e-62 |
Identity: 73.42% |
Span: 474bp (79.3%) |
Frame: 2 |
| topoisomerase I [Camptotheca acuminata] |
| Match: gi|224116648|ref|XP_002317355.1| |
score: 238 |
e-value: 4e-61 |
Identity: 71.07% |
Span: 477bp (79.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222860420|gb|EEE97967.1| predicted protein [Populus trichocarpa] |
| Match: gi|224061073|ref|XP_002300344.1| |
score: 238 |
e-value: 4e-61 |
Identity: 70.44% |
Span: 477bp (79.8%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222847602|gb|EEE85149.1| predicted protein [Populus trichocarpa] |
| Match: gi|225465097|ref|XP_002266885.1| |
score: 233 |
e-value: 7e-60 |
Identity: 72.78% |
Span: 474bp (79.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270232381|emb|CBI21703.1| unnamed protein product [Vitis vinifera] |
| Match: gi|270241563|emb|CBI28783.1| |
score: 233 |
e-value: 9e-60 |
Identity: 68.99% |
Span: 474bp (79.3%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|225446979|ref|XP_002265386.1| |
score: 233 |
e-value: 9e-60 |
Identity: 68.99% |
Span: 474bp (79.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|255576254|ref|XP_002529020.1| |
score: 231 |
e-value: 4e-59 |
Identity: 69.81% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase type I, putative [Ricinus communis] >gi223531500|gb|EEF33331.1| DNA topoisomerase type I, putative ... |
| Match: gi|22091413|gb|AAL87337.2| |
score: 225 |
e-value: 2e-57 |
Identity: 67.72% |
Span: 474bp (79.3%) |
Frame: 2 |
| putative DNA topoisomerase I [Arabidopsis thaliana] |
| Match: gi|15240493|ref|NP_200342.1| |
score: 225 |
e-value: 2e-57 |
Identity: 67.72% |
Span: 474bp (79.3%) |
Frame: 2 |
| TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I [Arabidopsis thaliana] >gi9758163|dbj|BAB08548.1| DNA t... |
| Match: gi|14285799|sp|P93119.1|TOP1_DAUCA |
score: 221 |
e-value: 4e-56 |
Identity: 62.78% |
Span: 474bp (79.3%) |
Frame: 2 |
| RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I >gi1800221|gb|AAB41401.1| topoisomerase I [Daucu... |
| Match: gi|2330649|emb|CAA74890.1| |
score: 220 |
e-value: 6e-56 |
Identity: 69.08% |
Span: 456bp (76.3%) |
Frame: 2 |
| topoisomerase I [Pisum sativum] |
| Match: gi|62321045|dbj|BAD94115.1| |
score: 218 |
e-value: 4e-55 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase I [Arabidopsis thaliana] |
| Match: gi|62320878|dbj|BAD93853.1| |
score: 218 |
e-value: 4e-55 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase I [Arabidopsis thaliana] |
| Match: gi|20258815|gb|AAM14018.1| |
score: 218 |
e-value: 4e-55 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| putative DNA topoisomerase I [Arabidopsis thaliana] |
| Match: gi|15240492|ref|NP_200341.1| |
score: 218 |
e-value: 4e-55 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| TOP1ALPHA (DNA TOPOISOMERASE I ALPHA); DNA topoisomerase type I [Arabidopsis thaliana] >gi267146|sp|P30181.1|TOP1_ARA... |
| Match: gi|242078207|ref|XP_002443872.1| |
score: 214 |
e-value: 4e-54 |
Identity: 68.18% |
Span: 462bp (77.3%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_07g003610 [Sorghum bicolor] >gi241940222|gb|EES13367.1| hypothetical protein SORBIDRA... |
| Match: gi|125560180|gb|EAZ05628.1| |
score: 214 |
e-value: 4e-54 |
Identity: 67.09% |
Span: 474bp (79.3%) |
Frame: 2 |
| hypothetical protein OsI_27847 [Oryza sativa Indica Group] |
| Match: gi|115474837|ref|NP_001061015.1| |
score: 214 |
e-value: 4e-54 |
Identity: 67.09% |
Span: 474bp (79.3%) |
Frame: 2 |
| Os08g0154600 [Oryza sativa (japonica cultivar-group)] >gi27817923|dbj|BAC55688.1| putative DNA topoisomerase I [Oryza... |
| Match: gi|219884043|gb|ACL52396.1| |
score: 213 |
e-value: 1e-53 |
Identity: 67.53% |
Span: 462bp (77.3%) |
Frame: 2 |
| unknown [Zea mays] |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At5G55310.1 |
score: 225 |
e-value: 1e-59 |
Identity: 67.72% |
Span: 474bp (79.3%) |
Frame: 2 |
| Symbols: TOP1, TOP1alpha | TOP1alpha (TOPOISOMERASE I) | chr5:22447615-22451816 REVERSE |
| Match: At5G55300.1 |
score: 218 |
e-value: 3e-57 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| Symbols: TOP1BETA | TOP1BETA (DNA TOPOISOMERASE 1 BETA); DNA topoisomerase type I | chr5:22442063-22446271 REVERSE |
|
| swissprot [blastx] | Showing best 18 hits recorded |
| Match: P93119 |
score: 221 |
e-value: 3e-57 |
Identity: 62.78% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Daucus carota GN=TOP1 PE=2 SV=1 |
| Match: P30181 |
score: 218 |
e-value: 3e-56 |
Identity: 65.82% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Arabidopsis thaliana GN=TOP1 PE=1 SV=1 |
| Match: Q7YR26 |
score: 122 |
e-value: 2e-27 |
Identity: 43.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Cercopithecus aethiops GN=TOP1 PE=2 SV=1 |
| Match: Q9WUL0 |
score: 122 |
e-value: 2e-27 |
Identity: 43.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Rattus norvegicus GN=Top1 PE=2 SV=1 |
| Match: P11387 |
score: 122 |
e-value: 2e-27 |
Identity: 43.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Homo sapiens GN=TOP1 PE=1 SV=2 |
| Match: Q04750 |
score: 121 |
e-value: 3e-27 |
Identity: 43.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Mus musculus GN=Top1 PE=1 SV=2 |
| Match: Q07050 |
score: 121 |
e-value: 3e-27 |
Identity: 43.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Cricetulus griseus GN=TOP1 PE=2 SV=1 |
| Match: O17966 |
score: 120 |
e-value: 5e-27 |
Identity: 41.25% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Caenorhabditis elegans GN=top-1 PE=2 SV=1 |
| Match: P30189 |
score: 120 |
e-value: 6e-27 |
Identity: 40% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Drosophila melanogaster GN=Top1 PE=1 SV=1 |
| Match: A9Q1D5 |
score: 115 |
e-value: 3e-25 |
Identity: 38.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase I, mitochondrial OS=Pan troglodytes GN=TOP1MT PE=2 SV=1 |
| Match: Q969P6 |
score: 115 |
e-value: 3e-25 |
Identity: 38.75% |
Span: 477bp (79.8%) |
Frame: 2 |
| DNA topoisomerase I, mitochondrial OS=Homo sapiens GN=TOP1MT PE=2 SV=1 |
| Match: Q6IM78 |
score: 114 |
e-value: 3e-25 |
Identity: 40.88% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase I, mitochondrial OS=Rattus norvegicus GN=Top1mt PE=2 SV=1 |
| Match: Q54RC3 |
score: 113 |
e-value: 1e-24 |
Identity: 37.23% |
Span: 438bp (73.2%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Dictyostelium discoideum GN=top1 PE=3 SV=1 |
| Match: Q8R4U6 |
score: 113 |
e-value: 1e-24 |
Identity: 40.88% |
Span: 474bp (79.3%) |
Frame: 2 |
| DNA topoisomerase I, mitochondrial OS=Mus musculus GN=Top1mt PE=2 SV=1 |
| Match: P41512 |
score: 105 |
e-value: 2e-22 |
Identity: 39.35% |
Span: 450bp (75.3%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Xenopus laevis GN=top1 PE=2 SV=1 |
| Match: P07799 |
score: 84.7 |
e-value: 4e-16 |
Identity: 36.36% |
Span: 393bp (65.7%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Schizosaccharomyces pombe GN=top1 PE=1 SV=2 |
| Match: Q00313 |
score: 84 |
e-value: 6e-16 |
Identity: 37.93% |
Span: 348bp (58.2%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Candida albicans GN=TOP1 PE=3 SV=1 |
| Match: P04786 |
score: 82.4 |
e-value: 2e-15 |
Identity: 33.85% |
Span: 390bp (65.2%) |
Frame: 2 |
| DNA topoisomerase 1 OS=Saccharomyces cerevisiae GN=TOP1 PE=1 SV=2 |
|