| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|224112373|ref|XP_002316168.1| |
score: 177 |
e-value: 7e-43 |
Identity: 95.6% |
Span: 273bp (47.6%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi118482915|gb|ABK93371.1| unknown [Populus trichocarpa] >gi|222865208|gb|EE... |
| Match: gi|255587821|ref|XP_002534408.1| |
score: 176 |
e-value: 1e-42 |
Identity: 94.51% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein f, putative [Ricinus communis] >gi223525355|gb|EEF27977.1| small nuclear ribonucleopr... |
| Match: gi|225434160|ref|XP_002278412.1| |
score: 175 |
e-value: 2e-42 |
Identity: 95.6% |
Span: 273bp (47.6%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270235585|emb|CBI24712.1| unnamed protein product [Vitis vinifera] |
| Match: gi|224098796|ref|XP_002311269.1| |
score: 174 |
e-value: 5e-42 |
Identity: 94.51% |
Span: 273bp (47.6%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi118483023|gb|ABK93423.1| unknown [Populus trichocarpa] >gi|222851089|gb|EE... |
| Match: gi|255627589|gb|ACU14139.1| |
score: 174 |
e-value: 6e-42 |
Identity: 94.51% |
Span: 273bp (47.6%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|116792892|gb|ABK26542.1| |
score: 173 |
e-value: 1e-41 |
Identity: 93.41% |
Span: 273bp (47.6%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|116782342|gb|ABK22473.1| |
score: 169 |
e-value: 1e-40 |
Identity: 91.21% |
Span: 273bp (47.6%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|15224366|ref|NP_181909.1| |
score: 165 |
e-value: 3e-39 |
Identity: 87.91% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|222424888|dbj|BAH20395.1| |
score: 163 |
e-value: 1e-38 |
Identity: 86.81% |
Span: 273bp (47.6%) |
Frame: 2 |
| AT2G43810 [Arabidopsis thaliana] |
| Match: gi|218190824|gb|EEC73251.1| |
score: 162 |
e-value: 2e-38 |
Identity: 88.89% |
Span: 270bp (47.0%) |
Frame: 2 |
| hypothetical protein OsI_07364 [Oryza sativa Indica Group] |
| Match: gi|21554327|gb|AAM63434.1| |
score: 161 |
e-value: 3e-38 |
Identity: 86.81% |
Span: 273bp (47.6%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] |
| Match: gi|115446301|ref|NP_001046930.1| |
score: 160 |
e-value: 7e-38 |
Identity: 88.76% |
Span: 267bp (46.5%) |
Frame: 2 |
| Os02g0510100 [Oryza sativa (japonica cultivar-group)] >gi113536461|dbj|BAF08844.1| Os02g0510100 [Oryza sativa Japonic... |
| Match: gi|48716974|dbj|BAD23667.1| |
score: 160 |
e-value: 7e-38 |
Identity: 88.76% |
Span: 267bp (46.5%) |
Frame: 2 |
| putative Sm protein F [Oryza sativa Japonica Group] >gi215765012|dbj|BAG86709.1| unnamed protein product [Oryza sativ... |
| Match: gi|15232179|ref|NP_191540.1| |
score: 159 |
e-value: 2e-37 |
Identity: 86.81% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|212722680|ref|NP_001131392.1| |
score: 158 |
e-value: 3e-37 |
Identity: 84.95% |
Span: 270bp (47.0%) |
Frame: 2 |
| hypothetical protein LOC100192719 [Zea mays] >gi194691404|gb|ACF79786.1| unknown [Zea mays] >gi|195605878|gb|ACG24769... |
| Match: gi|242075544|ref|XP_002447708.1| |
score: 157 |
e-value: 4e-37 |
Identity: 88.76% |
Span: 267bp (46.5%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_06g013920 [Sorghum bicolor] >gi241938891|gb|EES12036.1| hypothetical protein SORBIDRA... |
| Match: gi|115458068|ref|NP_001052634.1| |
score: 155 |
e-value: 2e-36 |
Identity: 87.5% |
Span: 264bp (46.0%) |
Frame: 2 |
| Os04g0388900 [Oryza sativa (japonica cultivar-group)] >gi113564205|dbj|BAF14548.1| Os04g0388900 [Oryza sativa Japonic... |
| Match: gi|168005297|ref|XP_001755347.1| |
score: 155 |
e-value: 3e-36 |
Identity: 93.67% |
Span: 237bp (41.3%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162693475|gb|EDQ79827.1| predicted protein [Physcomitrella... |
| Match: gi|168041946|ref|XP_001773451.1| |
score: 150 |
e-value: 5e-35 |
Identity: 83.52% |
Span: 267bp (46.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162675327|gb|EDQ61824.1| predicted protein [Physcomitrella... |
| Match: gi|255078316|ref|XP_002502738.1| |
score: 146 |
e-value: 1e-33 |
Identity: 85.71% |
Span: 252bp (43.9%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226518004|gb|ACO63996.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|73978282|ref|XP_855162.1| |
score: 140 |
e-value: 6e-32 |
Identity: 83.95% |
Span: 243bp (42.3%) |
Frame: 2 |
| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Canis familiaris] |
| Match: gi|5901998|ref|NP_009011.1| |
score: 140 |
e-value: 1e-31 |
Identity: 84.81% |
Span: 237bp (41.3%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 [Homo sapiens] >gi113865835|ref|NP_084421.1| U6 snRNA-associated Sm-like pro... |
| Match: gi|291225628|ref|XP_002732802.1| |
score: 139 |
e-value: 2e-31 |
Identity: 90.41% |
Span: 219bp (38.2%) |
Frame: 2 |
| PREDICTED: Sm protein F-like [Saccoglossus kowalevskii] |
| Match: gi|50344808|ref|NP_001002077.1| |
score: 139 |
e-value: 2e-31 |
Identity: 83.54% |
Span: 237bp (41.3%) |
Frame: 2 |
| Sm protein F [Danio rerio] >gi48735113|gb|AAH72549.1| LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [... |
| Match: gi|229367210|gb|ACQ58585.1| |
score: 138 |
e-value: 3e-31 |
Identity: 85.71% |
Span: 231bp (40.2%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 [Anoplopoma fimbria] |
|
| 164 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 4 hits recorded |
| Match: At2G43810.2 |
score: 165 |
e-value: 2e-41 |
Identity: 87.91% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At2G43810.1 |
score: 165 |
e-value: 2e-41 |
Identity: 87.91% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At3G59810.1 |
score: 159 |
e-value: 1e-39 |
Identity: 86.81% |
Span: 273bp (47.6%) |
Frame: 2 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At4G30220.1 |
score: 74.7 |
e-value: 3e-14 |
Identity: 45.83% |
Span: 216bp (37.6%) |
Frame: 2 |
| Symbols: RUXF | small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative | chr4:1480... |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: P62313 |
score: 140 |
e-value: 7e-33 |
Identity: 84.81% |
Span: 237bp (41.3%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus GN=Lsm6 PE=2 SV=1 |
| Match: P62312 |
score: 140 |
e-value: 7e-33 |
Identity: 84.81% |
Span: 237bp (41.3%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens GN=LSM6 PE=1 SV=1 |
| Match: B0DWN3 |
score: 115 |
e-value: 2e-25 |
Identity: 68.42% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Laccaria bicolor (strain S238N-H82) GN=LSM6 PE=3 SV=1 |
| Match: A8NHT8 |
score: 115 |
e-value: 2e-25 |
Identity: 72.37% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=LSM6 PE=3 SV=2 |
| Match: Q4PG71 |
score: 111 |
e-value: 3e-24 |
Identity: 60% |
Span: 255bp (44.4%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Ustilago maydis GN=LSM6 PE=3 SV=2 |
| Match: Q552U1 |
score: 105 |
e-value: 1e-22 |
Identity: 66.23% |
Span: 231bp (40.2%) |
Frame: 2 |
| Probable U6 snRNA-associated Sm-like protein LSm6 OS=Dictyostelium discoideum GN=lsm6 PE=3 SV=1 |
| Match: Q9UUI1 |
score: 104 |
e-value: 4e-22 |
Identity: 66.18% |
Span: 204bp (35.5%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Schizosaccharomyces pombe GN=lsm6 PE=2 SV=1 |
| Match: A6R363 |
score: 101 |
e-value: 4e-21 |
Identity: 64.94% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=LSM6 PE=3 SV=1 |
| Match: Q2HAN0 |
score: 99 |
e-value: 2e-20 |
Identity: 62.03% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Chaetomium globosum GN=LSM6 PE=3 SV=2 |
| Match: A7UXE4 |
score: 97.1 |
e-value: 7e-20 |
Identity: 59.49% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Neurospora crassa GN=lsm-6 PE=3 SV=2 |
| Match: A1DM27 |
score: 97.1 |
e-value: 7e-20 |
Identity: 61.25% |
Span: 240bp (41.8%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181... |
| Match: Q1DRN0 |
score: 97.1 |
e-value: 7e-20 |
Identity: 58.67% |
Span: 225bp (39.2%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Coccidioides immitis GN=LSM6 PE=3 SV=1 |
| Match: Q4WNI0 |
score: 96.7 |
e-value: 9e-20 |
Identity: 64.38% |
Span: 219bp (38.2%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus fumigatus GN=lsm6 PE=3 SV=2 |
| Match: A1CE19 |
score: 94.4 |
e-value: 4e-19 |
Identity: 59.21% |
Span: 228bp (39.7%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus clavatus GN=lsm6 PE=3 SV=2 |
| Match: A4RQ29 |
score: 91.3 |
e-value: 4e-18 |
Identity: 58.02% |
Span: 234bp (40.8%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Magnaporthe grisea GN=LSM6 PE=3 SV=1 |
| Match: Q5K712 |
score: 87.8 |
e-value: 4e-17 |
Identity: 57.35% |
Span: 204bp (35.5%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Cryptococcus neoformans GN=LSM6 PE=3 SV=1 |
| Match: Q0UWI9 |
score: 85.1 |
e-value: 3e-16 |
Identity: 50.59% |
Span: 243bp (42.3%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Phaeosphaeria nodorum GN=LSM6 PE=3 SV=2 |
| Match: A6S5C9 |
score: 84 |
e-value: 6e-16 |
Identity: 49.4% |
Span: 249bp (43.4%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Botryotinia fuckeliana (strain B05.10) GN=lsm6 PE=3 SV=2 |
| Match: A7F5M4 |
score: 82.8 |
e-value: 1e-15 |
Identity: 55.07% |
Span: 207bp (36.1%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=lsm6 PE=3 SV=2 |
| Match: Q6BR90 |
score: 80.1 |
e-value: 8e-15 |
Identity: 55.22% |
Span: 201bp (35.0%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Debaryomyces hansenii GN=LSM6 PE=3 SV=2 |
| Match: A5DRQ6 |
score: 77 |
e-value: 7e-14 |
Identity: 52.24% |
Span: 201bp (35.0%) |
Frame: 2 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Lodderomyces elongisporus GN=LSM6 PE=3 SV=2 |
| Match: P62321 |
score: 74.7 |
e-value: 4e-13 |
Identity: 50% |
Span: 198bp (34.5%) |
Frame: 2 |
| Small nuclear ribonucleoprotein F OS=Xenopus laevis GN=snrpf PE=3 SV=1 |
| Match: P62307 |
score: 74.7 |
e-value: 4e-13 |
Identity: 50% |
Span: 198bp (34.5%) |
Frame: 2 |
| Small nuclear ribonucleoprotein F OS=Mus musculus GN=Snrpf PE=2 SV=1 |
| Match: P62306 |
score: 74.7 |
e-value: 4e-13 |
Identity: 50% |
Span: 198bp (34.5%) |
Frame: 2 |
| Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF PE=1 SV=1 |
| Match: Q3T0Z8 |
score: 74.7 |
e-value: 4e-13 |
Identity: 50% |
Span: 198bp (34.5%) |
Frame: 2 |
| Small nuclear ribonucleoprotein F OS=Bos taurus GN=SNRPF PE=3 SV=2 |
|
| 3 lower scoring hits censored -- only 25 best hits are stored. |
