| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|9843653|emb|CAC03600.1| |
score: 191.8 |
e-value: 5e-48 |
Identity: 77.87% |
Span: 366bp (63.8%) |
Frame: 3 |
| splicing factor SC35 [Arabidopsis thaliana] |
| Match: gi|15237641|ref|NP_201225.1| |
score: 191.8 |
e-value: 5e-48 |
Identity: 77.87% |
Span: 366bp (63.8%) |
Frame: 3 |
| ATSC35; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi30697964|ref|NP_851261.1| A... |
| Match: gi|7446336|pir||T09704 |
score: 189.1 |
e-value: 3.2e-47 |
Identity: 76.86% |
Span: 363bp (63.2%) |
Frame: 3 |
| gi|7446336|pir||T09704 probable arginine/serine-rich splicing factor - alfalfa gi|3334756|emb|CAA76346.1| putative ar... |
| Match: gi|42408182|dbj|BAD09319.1| |
score: 186 |
e-value: 2.7e-46 |
Identity: 74.19% |
Span: 372bp (64.8%) |
Frame: 3 |
| gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33146621|dbj|BAC79909.1| |
score: 185.7 |
e-value: 3.6e-46 |
Identity: 74.8% |
Span: 369bp (64.3%) |
Frame: 3 |
| gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor SC35) [Oryza sativa (ja... |
| Match: gi|47604918|ref|NP_001001305.1| |
score: 89.35 |
e-value: 3.5e-17 |
Identity: 46% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|47604918|ref|NP_001001305.1| arginine/serine-rich2 splicing factor; PR 264 protein; splicing factor SC35 [Gallus g... |
| Match: gi|6755478|ref|NP_035488.1| |
score: 89.35 |
e-value: 3.5e-17 |
Identity: 46% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|6755478|ref|NP_035488.1| splicing factor, arginine/serine-rich 2; splicing factor Sc35; myelin regulatory factor 1... |
| Match: gi|1405747|emb|CAA67134.1| |
score: 89.35 |
e-value: 3.5e-17 |
Identity: 46% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|1405747|emb|CAA67134.1| PR264/SC35 [Mus musculus] |
| Match: gi|26345390|dbj|BAC36346.1| |
score: 89.35 |
e-value: 3.5e-17 |
Identity: 46% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|26345390|dbj|BAC36346.1| unnamed protein product [Mus musculus] |
| Match: gi|45361503|ref|NP_989328.1| |
score: 87.81 |
e-value: 1e-16 |
Identity: 45% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|45361503|ref|NP_989328.1| hypothetical protein MGC75633 [Xenopus tropicalis] >gi|39794351|gb|AAH64167.1| Hypotheti... |
| Match: gi|28175397|gb|AAH45229.1| |
score: 87.81 |
e-value: 1e-16 |
Identity: 45% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis] |
| Match: gi|47087067|ref|NP_998547.1| |
score: 87.04 |
e-value: 1.7e-16 |
Identity: 42.34% |
Span: 327bp (57.0%) |
Frame: 3 |
| gi|47087067|ref|NP_998547.1| zgc:56283 [Danio rerio] >gi|28279759|gb|AAH46045.1| Zgc:56283 protein [Danio rerio] |
| Match: gi|41946787|gb|AAH65971.1| |
score: 86.66 |
e-value: 2.3e-16 |
Identity: 44% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|41946787|gb|AAH65971.1| Unknown (protein for MGC:77420) [Danio rerio] |
| Match: gi|31233152|ref|XP_318826.1| |
score: 86.66 |
e-value: 2.3e-16 |
Identity: 45% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|31233152|ref|XP_318826.1| ENSANGP00000010223 [Anopheles gambiae] gi|21302083|gb|EAA14228.1| ENSANGP00000010223 [An... |
| Match: gi|41054475|ref|NP_955945.1| |
score: 86.66 |
e-value: 2.3e-16 |
Identity: 44% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|41054475|ref|NP_955945.1| splicing factor, arginine/serine-rich 2 (SC-35) [Danio rerio] gi|28278933|gb|AAH45480.1|... |
| Match: gi|266992|sp|Q01130|SFR2_HUMAN |
score: 86.27 |
e-value: 3e-16 |
Identity: 45% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|266992|sp|Q01130|SFR2_HUMAN Splicing factor, arginine/serine-rich 2 (Splicing factor SC35) (SC-35) (Splicing compo... |
| Match: gi|21751099|dbj|BAC03903.1| |
score: 86.27 |
e-value: 3e-16 |
Identity: 43.81% |
Span: 315bp (54.9%) |
Frame: 3 |
| gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens] |
| Match: gi|21358099|ref|NP_652612.1| |
score: 85.5 |
e-value: 5e-16 |
Identity: 45% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|21358099|ref|NP_652612.1| CG5442-PB [Drosophila melanogaster] gi|7243688|gb|AAF43415.1| SR family splicing factor ... |
| Match: gi|3892187|gb|AAC78303.1| |
score: 85.11 |
e-value: 6.6e-16 |
Identity: 45.69% |
Span: 339bp (59.1%) |
Frame: 3 |
| gi|3892187|gb|AAC78303.1| RNA-binding protein [Schistosoma japonicum] |
| Match: gi|48135454|ref|XP_393352.1| |
score: 84.34 |
e-value: 1.1e-15 |
Identity: 44% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|48135454|ref|XP_393352.1| similar to ENSANGP00000010223 [Apis mellifera] |
| Match: gi|29735276|ref|XP_294247.1| |
score: 80.49 |
e-value: 1.6e-14 |
Identity: 43% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|29735276|ref|XP_294247.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo sapiens] |
| Match: gi|39596864|emb|CAE59091.1| |
score: 79.34 |
e-value: 3.6e-14 |
Identity: 39.82% |
Span: 336bp (58.5%) |
Frame: 3 |
| gi|39596864|emb|CAE59091.1| Hypothetical protein CBG02383 [Caenorhabditis briggsae] |
| Match: gi|17532819|ref|NP_495014.1| |
score: 78.57 |
e-value: 6.2e-14 |
Identity: 39.82% |
Span: 336bp (58.5%) |
Frame: 3 |
| gi|17532819|ref|NP_495014.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (rsp-4) [Caenorhabditis elegans] g... |
| Match: gi|17532817|ref|NP_495013.1| |
score: 78.57 |
e-value: 6.2e-14 |
Identity: 39.82% |
Span: 336bp (58.5%) |
Frame: 3 |
| gi|17532817|ref|NP_495013.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (22.6 kD) (rsp-4) [Caenorhabditis ... |
| Match: gi|34784708|gb|AAH57783.1| |
score: 77.41 |
e-value: 1.4e-13 |
Identity: 42% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|34784708|gb|AAH57783.1| SRP46 protein [Homo sapiens] |
| Match: gi|15055543|ref|NP_115285.1| |
score: 77.41 |
e-value: 1.4e-13 |
Identity: 42% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|15055543|ref|NP_115285.1| Splicing factor, arginine/serine-rich, 46kD [Homo sapiens] gi|14141201|gb|AAK54350.1| SR... |
| Match: gi|9837439|gb|AAG00575.1| |
score: 77.03 |
e-value: 1.8e-13 |
Identity: 44.57% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|9837439|gb|AAG00575.1| splicing factor arginine/serine rich 2 [Oryzias latipes] |
| Match: gi|42659784|ref|XP_372429.2| |
score: 76.64 |
e-value: 2.3e-13 |
Identity: 42% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|42659784|ref|XP_372429.2| similar to FLJ10251 protein [Homo sapiens] |
| Match: gi|41147872|ref|XP_374607.1| |
score: 76.64 |
e-value: 2.3e-13 |
Identity: 42% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|41147872|ref|XP_374607.1| similar to Splicing factor, arginine/serine-rich, 46kD [Homo sapiens] |
| Match: gi|21752539|dbj|BAC04206.1| |
score: 70.86 |
e-value: 1.3e-11 |
Identity: 44.19% |
Span: 258bp (44.9%) |
Frame: 3 |
| gi|21752539|dbj|BAC04206.1| unnamed protein product [Homo sapiens] |
| Match: gi|14141216|gb|AAK54351.1| |
score: 70.09 |
e-value: 2.2e-11 |
Identity: 42.39% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|14141216|gb|AAK54351.1| SRp46 splicing factor [Homo sapiens] |
| Match: gi|44890463|gb|AAH66958.1| |
score: 69.71 |
e-value: 2.9e-11 |
Identity: 44.05% |
Span: 252bp (43.9%) |
Frame: 3 |
| gi|44890463|gb|AAH66958.1| SFRS2 protein [Homo sapiens] |
| Match: gi|38086358|ref|XP_284704.2| |
score: 61.23 |
e-value: 1e-08 |
Identity: 38.39% |
Span: 336bp (58.5%) |
Frame: 3 |
| gi|38086358|ref|XP_284704.2| similar to splicing factor, arginine/serine-rich (transformer 2 Drosophila homolog) 10 [... |
| Match: gi|31249706|gb|AAP46199.1| |
score: 60.08 |
e-value: 2.3e-08 |
Identity: 35.45% |
Span: 330bp (57.5%) |
Frame: 3 |
| putative splicing factor [Oryza sativa Japonica Group] >gi108708412|gb|ABF96207.1| RNA recognition motif family prote... |
| Match: gi|30687014|ref|NP_197382.3| |
score: 59.69 |
e-value: 3e-08 |
Identity: 31.46% |
Span: 267bp (46.5%) |
Frame: 3 |
| SCL28; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi91806878|gb|ABE66166.1| 28 k... |
| Match: gi|26452521|dbj|BAC43345.1| |
score: 59.69 |
e-value: 3e-08 |
Identity: 31.46% |
Span: 267bp (46.5%) |
Frame: 3 |
| putative Serine/arginine rich protein [Arabidopsis thaliana] |
| Match: gi|423485|pir||A46241 |
score: 58.92 |
e-value: 5.1e-08 |
Identity: 45.68% |
Span: 243bp (42.3%) |
Frame: 3 |
| gi|423485|pir||A46241 interferon response element-binding factor IREBF-2 - mouse (fragment) gi|293675|gb|AAA39332.1|... |
| Match: gi|9843655|emb|CAC03601.1| |
score: 58.92 |
e-value: 5.1e-08 |
Identity: 30.34% |
Span: 267bp (46.5%) |
Frame: 3 |
| SC35-like splicing factor SCL28, 28 kD [Arabidopsis thaliana] |
| Match: gi|21758154|dbj|BAC05256.1| |
score: 58.15 |
e-value: 8.6e-08 |
Identity: 36.45% |
Span: 321bp (55.9%) |
Frame: 3 |
| gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens] |
| Match: gi|38076498|ref|XP_124054.2| |
score: 58.15 |
e-value: 8.6e-08 |
Identity: 36.45% |
Span: 321bp (55.9%) |
Frame: 3 |
| gi|38076498|ref|XP_124054.2| similar to splicing factor, arginine/serine-rich (transformer 2 Drosophila homolog) 10 [... |
| Match: gi|4377849|gb|AAD19278.1| |
score: 58.15 |
e-value: 8.6e-08 |
Identity: 36.45% |
Span: 321bp (55.9%) |
Frame: 3 |
| gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens] |
| Match: gi|4759098|ref|NP_004584.1| |
score: 58.15 |
e-value: 8.6e-08 |
Identity: 36.45% |
Span: 321bp (55.9%) |
Frame: 3 |
| gi|4759098|ref|NP_004584.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila) [Homo sapien... |
| Match: gi|48894880|ref|ZP_00327989.1| |
score: 57.77 |
e-value: 1.1e-07 |
Identity: 40% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|48894880|ref|ZP_00327989.1| COG0724: RNA-binding proteins (RRM domain) [Trichodesmium erythraeum IMS101] |
| Match: gi|38636774|dbj|BAD03017.1| |
score: 57 |
e-value: 1.9e-07 |
Identity: 32.65% |
Span: 294bp (51.2%) |
Frame: 3 |
| gi|38636774|dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza sativa (japonica cultivar-... |
| Match: gi|29654486|ref|NP_820178.1| |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 34% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|29654486|ref|NP_820178.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493] gi|29541753|gb|AAO90692.... |
| Match: gi|48893520|ref|ZP_00326756.1| |
score: 56.61 |
e-value: 2.5e-07 |
Identity: 38.24% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|48893520|ref|ZP_00326756.1| COG0724: RNA-binding proteins (RRM domain) [Trichodesmium erythraeum IMS101] |
| Match: gi|45382747|ref|NP_990009.1| |
score: 56.22 |
e-value: 3.3e-07 |
Identity: 34.58% |
Span: 321bp (55.9%) |
Frame: 3 |
| gi|45382747|ref|NP_990009.1| transformer-2 beta [Gallus gallus] >gi|11494371|gb|AAG35783.1| transformer-2 beta [Gallu... |
| Match: gi|23123859|ref|ZP_00105894.1| |
score: 56.22 |
e-value: 3.3e-07 |
Identity: 38.89% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|23123859|ref|ZP_00105894.1| COG0724: RNA-binding proteins (RRM domain) [Nostoc punctiforme] |
| Match: gi|15219486|ref|NP_177494.1| |
score: 55.84 |
e-value: 4.3e-07 |
Identity: 30.91% |
Span: 324bp (56.4%) |
Frame: 3 |
| gi|15219486|ref|NP_177494.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25406274|pir||A... |
| Match: gi|15228279|ref|NP_187651.1| |
score: 55.84 |
e-value: 4.3e-07 |
Identity: 30.95% |
Span: 378bp (65.9%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi12322795|gb|AAG51392.1|AC011560_24 hypotheti... |
| Match: gi|34913294|ref|NP_917994.1| |
score: 55.45 |
e-value: 5.6e-07 |
Identity: 33.33% |
Span: 315bp (54.9%) |
Frame: 3 |
| gi|34913294|ref|NP_917994.1| putative serine/arginine-rich protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33146902|dbj|BAC79901.1| |
score: 55.45 |
e-value: 5.6e-07 |
Identity: 33.33% |
Span: 315bp (54.9%) |
Frame: 3 |
| gi|33146902|dbj|BAC79901.1| putative SC35-like splicing factor SCL30a [Oryza sativa (japonica cultivar-group)] |
| Match: gi|31202691|ref|XP_310294.1| |
score: 55.45 |
e-value: 5.6e-07 |
Identity: 30.21% |
Span: 288bp (50.2%) |
Frame: 3 |
| gi|31202691|ref|XP_310294.1| ENSANGP00000015892 [Anopheles gambiae] gi|21293879|gb|EAA06024.1| ENSANGP00000015892 [An... |
| Match: gi|49204555|dbj|BAD24704.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204555|dbj|BAD24704.1| transformer-2b5 [Oryzias latipes] |
| Match: gi|49204543|dbj|BAD24702.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzias latipes] |
| Match: gi|49204551|dbj|BAD24703.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes] |
| Match: gi|49204538|dbj|BAD24701.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzias latipes] |
| Match: gi|46229752|gb|EAK90570.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 36.96% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like splicing factor [Crypt... |
| Match: gi|49204567|dbj|BAD24706.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes] |
| Match: gi|22022315|dbj|BAC06514.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzias latipes] |
| Match: gi|49204563|dbj|BAD24705.1| |
score: 55.07 |
e-value: 7.3e-07 |
Identity: 35.92% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204563|dbj|BAD24705.1| transformer-2b6 [Oryzias latipes] |
| Match: gi|41151621|ref|XP_373341.1| |
score: 54.68 |
e-value: 9.5e-07 |
Identity: 32.29% |
Span: 288bp (50.2%) |
Frame: 3 |
| gi|41151621|ref|XP_373341.1| similar to PR264/SC35 [Homo sapiens] |
| Match: gi|48894879|ref|ZP_00327988.1| |
score: 54.68 |
e-value: 9.5e-07 |
Identity: 36.27% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|48894879|ref|ZP_00327988.1| COG0724: RNA-binding proteins (RRM domain) [Trichodesmium erythraeum IMS101] |
| Match: gi|32476441|ref|NP_869435.1| |
score: 54.68 |
e-value: 9.5e-07 |
Identity: 33.62% |
Span: 348bp (60.6%) |
Frame: 3 |
| gi|32476441|ref|NP_869435.1| RNA-binding protein [Pirellula sp.] gi|32446986|emb|CAD78892.1| RNA-binding protein [Pir... |
| Match: gi|27881815|gb|AAH44695.1| |
score: 54.68 |
e-value: 9.5e-07 |
Identity: 34.51% |
Span: 339bp (59.1%) |
Frame: 3 |
| gi|27881815|gb|AAH44695.1| Similar to splicing factor, arginine/serine-rich (transformer 2 Drosophila homolog) 10 [Xe... |
| Match: gi|14603220|gb|AAH10074.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens] |
| Match: gi|5730079|ref|NP_006616.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|5730079|ref|NP_006616.1| FUS interacting protein (serine-arginine rich) 1 isoform 1; TLS-associated serine-arginin... |
| Match: gi|4001722|dbj|BAA35093.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus] |
| Match: gi|16905517|ref|NP_473357.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|16905517|ref|NP_473357.1| FUS interacting protein (serine-arginine rich) 1 isoform 2; TLS-associated serine-argini... |
| Match: gi|4001720|dbj|BAA35092.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus] |
| Match: gi|22902265|gb|AAH37591.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|22902265|gb|AAH37591.1| Nssr protein [Mus musculus] |
| Match: gi|16265859|gb|AAL16666.1| |
score: 54.3 |
e-value: 1.2e-06 |
Identity: 33.33% |
Span: 306bp (53.3%) |
Frame: 3 |
| gi|16265859|gb|AAL16666.1| TLS-associated protein TASR-2 [Homo sapiens] |
| Match: gi|41055454|ref|NP_956710.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 34.88% |
Span: 258bp (44.9%) |
Frame: 3 |
| gi|41055454|ref|NP_956710.1| hypothetical protein MGC64175 [Danio rerio] gi|32451924|gb|AAH54632.1| Hypothetical prot... |
| Match: gi|11761319|dbj|BAB19129.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 31.87% |
Span: 273bp (47.6%) |
Frame: 3 |
| gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis] gi|32450232|gb|AAH54250.1| MGC64461... |
| Match: gi|22022313|dbj|BAC06513.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 33.98% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes] |
| Match: gi|15231285|ref|NP_187966.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 34.44% |
Span: 270bp (47.0%) |
Frame: 3 |
| SCL30a; RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi13878011|gb|AAK44083.1|AF37... |
| Match: gi|49204524|dbj|BAD24698.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 33.98% |
Span: 309bp (53.8%) |
Frame: 3 |
| gi|49204524|dbj|BAD24698.1| transformer-2a2 [Oryzias latipes] >gi|49204534|dbj|BAD24700.1| transformer-2a4 [Oryzias l... |
| Match: gi|47209886|emb|CAF94406.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 34.78% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|47209886|emb|CAF94406.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|15231311|ref|NP_190188.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 33% |
Span: 300bp (52.3%) |
Frame: 3 |
| RNA-binding protein, putative [Arabidopsis thaliana] >gi7630030|emb|CAB88326.1| RNA binding protein-like [Arabidopsis... |
| Match: gi|9843661|emb|CAC03604.1| |
score: 53.91 |
e-value: 1.6e-06 |
Identity: 34.44% |
Span: 270bp (47.0%) |
Frame: 3 |
| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana] |
| Match: gi|34872583|ref|XP_222200.2| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 33.33% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|34872583|ref|XP_222200.2| similar to RIKEN cDNA 1200009A02 [Rattus norvegicus] |
| Match: gi|20975278|dbj|BAB92956.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 33.71% |
Span: 267bp (46.5%) |
Frame: 3 |
| gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica] |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 32.76% |
Span: 348bp (60.6%) |
Frame: 3 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|18482476|gb|AAL68857.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 36% |
Span: 300bp (52.3%) |
Frame: 3 |
| gi|18482476|gb|AAL68857.1| transformer-2 beta [Macaca mulatta] |
| Match: gi|7446358|pir||T05725 |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 32.67% |
Span: 303bp (52.8%) |
Frame: 3 |
| gi|7446358|pir||T05725 cp31AHv protein - barley gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vu... |
| Match: gi|46229295|gb|EAK90144.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 33.7% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor [Cryptosporidium parvum] |
| Match: gi|18405316|ref|NP_564685.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 35.56% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|18405316|ref|NP_564685.1| arginine/serine-rich protein [Arabidopsis thaliana] gi|25405814|pir||B96595 unknown prot... |
| Match: gi|32398853|emb|CAD98563.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 33.7% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum] |
| Match: gi|11358835|pir||T50647 |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 35.56% |
Span: 270bp (47.0%) |
Frame: 3 |
| gi|11358835|pir||T50647 serine/arginine-rich protein [imported] - Arabidopsis thaliana gi|6572475|gb|AAF17288.1| Seri... |
| Match: gi|15293081|gb|AAK93651.1| |
score: 53.53 |
e-value: 2.1e-06 |
Identity: 35.56% |
Span: 270bp (47.0%) |
Frame: 3 |
| unknown protein [Arabidopsis thaliana] |
| Match: gi|5921787|sp|O93235|CIRP_XENLA |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 32.97% |
Span: 273bp (47.6%) |
Frame: 3 |
| gi|5921787|sp|O93235|CIRP_XENLA Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP) (XCIRP) gi... |
| Match: gi|20975276|dbj|BAB92955.1| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 33.71% |
Span: 267bp (46.5%) |
Frame: 3 |
| gi|20975276|dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica] |
| Match: gi|28317144|gb|AAO39587.1| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 36.89% |
Span: 303bp (52.8%) |
Frame: 3 |
| gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster] |
| Match: gi|45552120|ref|NP_788882.2| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 36.89% |
Span: 303bp (52.8%) |
Frame: 3 |
| gi|45552120|ref|NP_788882.2| CG33070-PK [Drosophila melanogaster] >gi|45446830|gb|AAO41639.2| CG33070-PK [Drosophila ... |
| Match: gi|45552118|ref|NP_788880.2| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 36.89% |
Span: 303bp (52.8%) |
Frame: 3 |
| gi|45552118|ref|NP_788880.2| CG33070-PF [Drosophila melanogaster] >gi|45446832|gb|AAO41637.2| CG33070-PF [Drosophila ... |
| Match: gi|100903|pir||S23780 |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 34.62% |
Span: 312bp (54.4%) |
Frame: 3 |
| gi|100903|pir||S23780 nucleic acid-binding protein - maize gi|168526|gb|AAA33486.1| nucleic acid-binding protein |
| Match: gi|47497762|dbj|BAD19862.1| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 31.93% |
Span: 348bp (60.6%) |
Frame: 3 |
| gi|47497762|dbj|BAD19862.1| putative initiation factor 3g [Oryza sativa (japonica cultivar-group)] |
| Match: gi|27735413|gb|AAH41204.1| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 32.97% |
Span: 273bp (47.6%) |
Frame: 3 |
| gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis] |
| Match: gi|49094682|ref|XP_408802.1| |
score: 53.14 |
e-value: 2.8e-06 |
Identity: 29.36% |
Span: 327bp (57.0%) |
Frame: 3 |
| gi|49094682|ref|XP_408802.1| hypothetical protein AN4665.2 [Aspergillus nidulans FGSC A4] >gi|40741517|gb|EAA60707.1|... |
| Match: gi|34872583|ref|XP_222200.2| |
score: 48.14 |
e-value: 8.9e-05 |
Identity: 30.43% |
Span: 276bp (48.1%) |
Frame: 3 |
| gi|34872583|ref|XP_222200.2| similar to RIKEN cDNA 1200009A02 [Rattus norvegicus] |
|
| 1 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 100 hits recorded |
| Match: At5g64200.2 |
score: 191.8 |
e-value: 1.6e-49 |
Identity: 77.87% |
Span: 366bp (63.8%) |
Frame: 3 |
| At5g64200.2 68412.m08081 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At5g64200.1 |
score: 191.8 |
e-value: 1.6e-49 |
Identity: 77.87% |
Span: 366bp (63.8%) |
Frame: 3 |
| At5g64200.1 68412.m08080 arginine/serine-rich splicing factor SC35 contains similarity to splicing factor |
| Match: At5g18810.1 |
score: 59.69 |
e-value: 9.8e-10 |
Identity: 31.46% |
Span: 267bp (46.5%) |
Frame: 3 |
| At5g18810.1 68412.m02049 SC35-like splicing factor SCL28 nearly identical to SC35-like splicing factor SCL28, 28 kD [... |
| Match: At3g10400.1 |
score: 55.84 |
e-value: 1.4e-08 |
Identity: 30.95% |
Span: 378bp (65.9%) |
Frame: 3 |
| At3g10400.1 68410.m01125 RNA recognition motif (RRM) - containing protein low similarity to splicing factor SC35 [Ara... |
| Match: At1g73530.1 |
score: 55.84 |
e-value: 1.4e-08 |
Identity: 30.91% |
Span: 324bp (56.4%) |
Frame: 3 |
| At1g73530.1 68408.m07810 RNA recognition motif (RRM) - containing protein low similarity to SP|Q03251 Glycine-rich RN... |
| Match: At3g46020.1 |
score: 53.91 |
e-value: 5.4e-08 |
Identity: 33% |
Span: 300bp (52.3%) |
Frame: 3 |
| At3g46020.1 68410.m04612 RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RN... |
| Match: At3g13570.1 |
score: 53.91 |
e-value: 5.4e-08 |
Identity: 34.44% |
Span: 270bp (47.0%) |
Frame: 3 |
| At3g13570.1 68410.m01531 arginine/serine-rich splicing factor SCL30a almost identical to SC35-like splicing factor SC... |
| Match: At1g55310.1 |
score: 53.53 |
e-value: 7e-08 |
Identity: 35.56% |
Span: 270bp (47.0%) |
Frame: 3 |
| At1g55310.1 68408.m05793 arginine/serine-rich protein |
| Match: At4g13860.1 |
score: 52.76 |
e-value: 1.2e-07 |
Identity: 36.78% |
Span: 261bp (45.5%) |
Frame: 3 |
| At4g13860.1 68411.m01943 RNA recognition motif (RRM) - containing protein similar to glycine-rich RNA binding protein... |
| Match: At3g47120.1 |
score: 51.99 |
e-value: 2e-07 |
Identity: 35.56% |
Span: 270bp (47.0%) |
Frame: 3 |
| At3g47120.1 68410.m04743 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g61030.1 |
score: 50.83 |
e-value: 4.5e-07 |
Identity: 34.09% |
Span: 264bp (46.0%) |
Frame: 3 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g20030.1 |
score: 50.83 |
e-value: 4.5e-07 |
Identity: 30.77% |
Span: 273bp (47.6%) |
Frame: 3 |
| At4g20030.1 68411.m02674 RNA recognition motif (RRM) - containing protein low similarity to heterogeneous nuclear rib... |
| Match: At5g06210.1 |
score: 50.45 |
e-value: 5.9e-07 |
Identity: 35.96% |
Span: 267bp (46.5%) |
Frame: 3 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At5g54580.1 |
score: 50.06 |
e-value: 7.7e-07 |
Identity: 28.87% |
Span: 291bp (50.7%) |
Frame: 3 |
| At5g54580.1 68412.m06145 RNA recognition motif (RRM) - containing protein low similarity to RNA-binding protein RGP-3... |
| Match: At3g23830.1 |
score: 49.29 |
e-value: 1.3e-06 |
Identity: 30% |
Span: 300bp (52.3%) |
Frame: 3 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.2 |
score: 49.29 |
e-value: 1.3e-06 |
Identity: 30% |
Span: 300bp (52.3%) |
Frame: 3 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g11400.1 |
score: 48.91 |
e-value: 1.7e-06 |
Identity: 32.29% |
Span: 288bp (50.2%) |
Frame: 3 |
| At3g11400.1 68410.m01256 eukaryotic translation initiation factor 3 subunit g (eIF3g) nearly identical to eukaryotic ... |
| Match: At1g74230.1 |
score: 48.52 |
e-value: 2.3e-06 |
Identity: 37.5% |
Span: 264bp (46.0%) |
Frame: 3 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At5g50250.1 |
score: 48.14 |
e-value: 2.9e-06 |
Identity: 32.97% |
Span: 273bp (47.6%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At4g39260.2 |
score: 47.75 |
e-value: 3.8e-06 |
Identity: 31.87% |
Span: 273bp (47.6%) |
Frame: 3 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.3 |
score: 47.75 |
e-value: 3.8e-06 |
Identity: 31.87% |
Span: 273bp (47.6%) |
Frame: 3 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 47.75 |
e-value: 3.8e-06 |
Identity: 31.87% |
Span: 273bp (47.6%) |
Frame: 3 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g34110.1 |
score: 47.75 |
e-value: 3.8e-06 |
Identity: 32.53% |
Span: 249bp (43.4%) |
Frame: 3 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At2g27330.1 |
score: 47.37 |
e-value: 5e-06 |
Identity: 29.17% |
Span: 279bp (48.6%) |
Frame: 3 |
| At2g27330.1 68409.m02980 RRM-containing protein |
| Match: At4g24770.1 |
score: 46.98 |
e-value: 6.6e-06 |
Identity: 31.68% |
Span: 303bp (52.8%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At2g37220.1 |
score: 46.98 |
e-value: 6.6e-06 |
Identity: 37.33% |
Span: 225bp (39.2%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At2g21440.1 |
score: 46.21 |
e-value: 1.1e-05 |
Identity: 30% |
Span: 270bp (47.0%) |
Frame: 3 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g19610.1 |
score: 46.21 |
e-value: 1.1e-05 |
Identity: 29% |
Span: 291bp (50.7%) |
Frame: 3 |
| At4g19610.1 68411.m02630 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At2g35410.1 |
score: 45.82 |
e-value: 1.5e-05 |
Identity: 34.83% |
Span: 267bp (46.5%) |
Frame: 3 |
| At2g35410.1 68409.m03925 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to SP|P19... |
| Match: At3g20930.1 |
score: 45.82 |
e-value: 1.5e-05 |
Identity: 28.16% |
Span: 309bp (53.8%) |
Frame: 3 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At3g55460.1 |
score: 45.44 |
e-value: 1.9e-05 |
Identity: 34.88% |
Span: 258bp (44.9%) |
Frame: 3 |
| At3g55460.1 68410.m05688 arginine/serine-rich protein SCL30 Serine/arginine-rich protein/putative splicing factor, Ar... |
| Match: At3g53460.2 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 33.7% |
Span: 276bp (48.1%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g43370.1 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 30.85% |
Span: 279bp (48.6%) |
Frame: 3 |
| At2g43370.1 68409.m04872 U1 small nuclear ribonucleoprotein 70 kDa, putative |
| Match: At4g13850.2 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 31.25% |
Span: 288bp (50.2%) |
Frame: 3 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At4g00830.1 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 33.8% |
Span: 213bp (37.1%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At3g53460.1 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 33.7% |
Span: 276bp (48.1%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At4g13850.1 |
score: 44.67 |
e-value: 3.3e-05 |
Identity: 31.25% |
Span: 288bp (50.2%) |
Frame: 3 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At2g21660.2 |
score: 44.28 |
e-value: 4.2e-05 |
Identity: 32.97% |
Span: 273bp (47.6%) |
Frame: 3 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.1 |
score: 44.28 |
e-value: 4.2e-05 |
Identity: 32.97% |
Span: 273bp (47.6%) |
Frame: 3 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At5g06000.1 |
score: 43.9 |
e-value: 5.5e-05 |
Identity: 28.83% |
Span: 333bp (58.0%) |
Frame: 3 |
| At5g06000.1 68412.m00618 eukaryotic translation initiation factor 3, putative similar to eukaryotic translation initi... |
| Match: At5g19030.1 |
score: 43.9 |
e-value: 5.5e-05 |
Identity: 28.87% |
Span: 291bp (50.7%) |
Frame: 3 |
| At5g19030.1 68412.m02073 RNA recognition motif (RRM) - containing protein low similarity to Cold-inducible RNA-bindin... |
| Match: At1g53720.1 |
score: 43.9 |
e-value: 5.5e-05 |
Identity: 28.57% |
Span: 294bp (51.2%) |
Frame: 3 |
| At1g53720.1 68408.m05608 cyclophilin-RNA interacting protein, putative NULL |
| Match: At1g07350.1 |
score: 43.9 |
e-value: 5.5e-05 |
Identity: 34.44% |
Span: 270bp (47.0%) |
Frame: 3 |
| At1g07350.1 68408.m00713 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At5g03580.1 |
score: 43.9 |
e-value: 5.5e-05 |
Identity: 29.41% |
Span: 255bp (44.4%) |
Frame: 3 |
| At5g03580.1 68412.m00293 polyadenylate-binding protein (poly(A)-binding protein), putative similar to poly(A)-binding... |
| Match: At1g60000.1 |
score: 43.13 |
e-value: 9.5e-05 |
Identity: 31.87% |
Span: 273bp (47.6%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At2g16260.1 |
score: 43.13 |
e-value: 9.5e-05 |
Identity: 29.41% |
Span: 255bp (44.4%) |
Frame: 3 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At2g37340.1 |
score: 42.74 |
e-value: 0.00012 |
Identity: 31.78% |
Span: 312bp (54.4%) |
Frame: 3 |
| At2g37340.1 68409.m04145 splicing factor RSZ33, putative nearly identical to splicing factor RSZ33 [Arabidopsis thali... |
| Match: At1g54080.1 |
score: 42.74 |
e-value: 0.00012 |
Identity: 26.53% |
Span: 294bp (51.2%) |
Frame: 3 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At1g07350.2 |
score: 42.74 |
e-value: 0.00012 |
Identity: 34.88% |
Span: 258bp (44.9%) |
Frame: 3 |
| At1g07350.2 68408.m00714 transformer serine/arginine-rich ribonucleoprotein, putative similar to GB:Y09506 from [Nico... |
| Match: At4g09040.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 27.18% |
Span: 300bp (52.3%) |
Frame: 3 |
| At4g09040.1 68411.m01341 RNA recognition motif (RRM) - containing protein low similarity to enhancer binding protein-... |
| Match: At5g59860.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 42.86% |
Span: 126bp (22.0%) |
Frame: 3 |
| At5g59860.1 68412.m06795 RNA recognition motif (RRM) - containing protein similar to SP|Q14011 Cold-inducible RNA-bin... |
| Match: At3g54230.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 25% |
Span: 270bp (47.0%) |
Frame: 3 |
| At3g54230.1 68410.m05544 RRM-containing protein KIAA0122 gene , Homo sapiens, EMBL:HSDKG02 |
| Match: At1g51510.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 24.78% |
Span: 339bp (59.1%) |
Frame: 3 |
| At1g51510.1 68408.m05321 RNA-binding protein, putative similar to RNA-binding protein 8 (Ribonucleoprotein RBM8) SP:Q... |
| Match: At2g23350.1 |
score: 41.97 |
e-value: 0.00021 |
Identity: 40.91% |
Span: 132bp (23.0%) |
Frame: 3 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At3g16380.1 |
score: 41.97 |
e-value: 0.00021 |
Identity: 31.11% |
Span: 270bp (47.0%) |
Frame: 3 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At2g23350.1 |
score: 41.97 |
e-value: 0.00021 |
Identity: 30.12% |
Span: 249bp (43.4%) |
Frame: 3 |
| At2g23350.1 68409.m02523 polyadenylate-binding protein (PABP), putative |
| Match: At5g50250.1 |
score: 41.97 |
e-value: 0.00021 |
Identity: 32.11% |
Span: 318bp (55.4%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g54080.2 |
score: 41.59 |
e-value: 0.00028 |
Identity: 40.91% |
Span: 132bp (23.0%) |
Frame: 3 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g13224.1 |
score: 41.59 |
e-value: 0.00028 |
Identity: 28.32% |
Span: 339bp (59.1%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g22760.1 |
score: 41.59 |
e-value: 0.00028 |
Identity: 35.29% |
Span: 153bp (26.7%) |
Frame: 3 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At1g17370.1 |
score: 41.2 |
e-value: 0.00036 |
Identity: 26.53% |
Span: 294bp (51.2%) |
Frame: 3 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At1g17640.1 |
score: 41.2 |
e-value: 0.00036 |
Identity: 33.73% |
Span: 249bp (43.4%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g34140.1 |
score: 40.82 |
e-value: 0.00047 |
Identity: 28.72% |
Span: 282bp (49.1%) |
Frame: 3 |
| At1g34140.1 68408.m03841 polyadenylate-binding protein (poly(A)-binding protein), putative non-consensus splice donor... |
| Match: At4g00830.1 |
score: 40.43 |
e-value: 0.00061 |
Identity: 29.9% |
Span: 291bp (50.7%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At3g14100.1 |
score: 40.43 |
e-value: 0.00061 |
Identity: 38.64% |
Span: 132bp (23.0%) |
Frame: 3 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At3g52380.1 |
score: 40.43 |
e-value: 0.00061 |
Identity: 31.03% |
Span: 261bp (45.5%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At3g13224.2 |
score: 40.43 |
e-value: 0.00061 |
Identity: 28.07% |
Span: 342bp (59.6%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g06970.1 |
score: 40.43 |
e-value: 0.00061 |
Identity: 28.57% |
Span: 273bp (47.6%) |
Frame: 3 |
| At3g06970.1 68410.m00752 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At4g16280.2 |
score: 40.05 |
e-value: 0.0008 |
Identity: 26.19% |
Span: 252bp (43.9%) |
Frame: 3 |
| At4g16280.2 68411.m02247 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At4g16280.3 |
score: 40.05 |
e-value: 0.0008 |
Identity: 26.19% |
Span: 252bp (43.9%) |
Frame: 3 |
| At4g16280.3 68411.m02248 Flowering time control protein (FCA) four alternative splice variants, one splicing isoform ... |
| Match: At1g01080.1 |
score: 40.05 |
e-value: 0.0008 |
Identity: 27.88% |
Span: 312bp (54.4%) |
Frame: 3 |
| At1g01080.1 68408.m00008 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to 33 KDA... |
| Match: At1g48920.1 |
score: 40.05 |
e-value: 0.0008 |
Identity: 32.65% |
Span: 291bp (50.7%) |
Frame: 3 |
| At1g48920.1 68408.m05015 nucleolin, putative similar to nuM1 protein GI:1279562 from [Medicago sativa] |
| Match: At3g53500.2 |
score: 40.05 |
e-value: 0.0008 |
Identity: 30.36% |
Span: 327bp (57.0%) |
Frame: 3 |
| At3g53500.2 68410.m05465 splicing factor - like protein splicing factor, arginine/serine-rich 7, Homo sapiens, PIR:A5... |
| Match: At4g26650.1 |
score: 40.05 |
e-value: 0.0008 |
Identity: 27.17% |
Span: 276bp (48.1%) |
Frame: 3 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g51300.2 |
score: 40.05 |
e-value: 0.0008 |
Identity: 31.25% |
Span: 240bp (41.8%) |
Frame: 3 |
| At5g51300.2 68412.m07949 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At5g51300.1 |
score: 40.05 |
e-value: 0.0008 |
Identity: 31.25% |
Span: 240bp (41.8%) |
Frame: 3 |
| At5g51300.1 68412.m07948 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At2g21440.1 |
score: 40.05 |
e-value: 0.0008 |
Identity: 37.78% |
Span: 135bp (23.5%) |
Frame: 3 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g52150.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 30.59% |
Span: 255bp (44.4%) |
Frame: 3 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At2g47310.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 26.09% |
Span: 267bp (46.5%) |
Frame: 3 |
| At2g47310.1 68409.m05334 Flowering time control protein-related (FCA-related) |
| Match: At3g08000.1 |
score: 39.28 |
e-value: 0.001 |
Identity: 25.71% |
Span: 315bp (54.9%) |
Frame: 3 |
| At3g08000.1 68410.m00882 RNA-binding protein, putative similar to RNA-binding protein from [Nicotiana tabacum] GI:158... |
| Match: At4g24770.1 |
score: 39.28 |
e-value: 0.001 |
Identity: 28.95% |
Span: 339bp (59.1%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At1g71770.1 |
score: 39.28 |
e-value: 0.001 |
Identity: 33.33% |
Span: 153bp (26.7%) |
Frame: 3 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At5g40490.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 27.27% |
Span: 231bp (40.2%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At1g49760.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 26.74% |
Span: 258bp (44.9%) |
Frame: 3 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At2g37510.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 29.41% |
Span: 255bp (44.4%) |
Frame: 3 |
| At2g37510.1 68409.m04161 RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-i... |
| Match: At1g49760.1 |
score: 38.51 |
e-value: 0.002 |
Identity: 33.33% |
Span: 153bp (26.7%) |
Frame: 3 |
| At1g49760.1 68408.m05111 polyadenylate-binding protein (PABP), putative similar to poly(A)-binding protein GB:AAF6682... |
| Match: At5g47620.2 |
score: 38.12 |
e-value: 0.003 |
Identity: 24.73% |
Span: 270bp (47.0%) |
Frame: 3 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g18630.1 |
score: 38.12 |
e-value: 0.003 |
Identity: 31.71% |
Span: 246bp (42.9%) |
Frame: 3 |
| At1g18630.1 68408.m02096 glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from ... |
| Match: At4g39260.4 |
score: 38.12 |
e-value: 0.003 |
Identity: 29.87% |
Span: 231bp (40.2%) |
Frame: 3 |
| At4g39260.4 68411.m05439 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At5g47620.1 |
score: 38.12 |
e-value: 0.003 |
Identity: 24.73% |
Span: 270bp (47.0%) |
Frame: 3 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At2g18510.1 |
score: 38.12 |
e-value: 0.003 |
Identity: 33.33% |
Span: 147bp (25.6%) |
Frame: 3 |
| At2g18510.1 68409.m01948 pre-mRNA splicing factor SF3b, putative |
| Match: At3g53460.2 |
score: 37.74 |
e-value: 0.004 |
Identity: 29.13% |
Span: 309bp (53.8%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 37.74 |
e-value: 0.004 |
Identity: 29.13% |
Span: 309bp (53.8%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At2g37220.1 |
score: 37.74 |
e-value: 0.004 |
Identity: 29.47% |
Span: 285bp (49.7%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At5g55550.2 |
score: 37.35 |
e-value: 0.005 |
Identity: 26.09% |
Span: 276bp (48.1%) |
Frame: 3 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.3 |
score: 37.35 |
e-value: 0.005 |
Identity: 26.09% |
Span: 276bp (48.1%) |
Frame: 3 |
| At5g55550.3 68418.m06922 RNA recognition motif (RRM)-containing protein similar to DAZ associated protein 1 [Homo sap... |
| Match: At1g71770.1 |
score: 37.35 |
e-value: 0.005 |
Identity: 30.26% |
Span: 228bp (39.7%) |
Frame: 3 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At3g13224.2 |
score: 36.58 |
e-value: 0.009 |
Identity: 29.41% |
Span: 204bp (35.5%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.1 |
score: 36.58 |
e-value: 0.009 |
Identity: 29.41% |
Span: 204bp (35.5%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g60000.1 |
score: 36.58 |
e-value: 0.009 |
Identity: 43.75% |
Span: 141bp (24.6%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
|
| 7 lower scoring hits censored -- only 100 best hits are stored. |
