| genbank/nr [blastx] | Showing best 57 hits recorded |
| Match: gi|21554835|gb|AAM63703.1| |
score: 234.2 |
e-value: 7.8e-61 |
Identity: 70% |
Span: 537bp (96.1%) |
Frame: 2 |
| unknown [Arabidopsis thaliana] |
| Match: gi|15237960|ref|NP_199496.1| |
score: 234.2 |
e-value: 7.8e-61 |
Identity: 70% |
Span: 537bp (96.1%) |
Frame: 2 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi8809667|dbj|BAA97218.1| unnamed protein prod... |
| Match: gi|29126350|gb|AAO66542.1| |
score: 208 |
e-value: 6e-53 |
Identity: 60.87% |
Span: 531bp (95.0%) |
Frame: 2 |
| gi|29126350|gb|AAO66542.1| unknown protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|27370124|ref|NP_766350.1| |
score: 93.59 |
e-value: 1.6e-18 |
Identity: 38.07% |
Span: 525bp (93.9%) |
Frame: 2 |
| gi|27370124|ref|NP_766350.1| DNA segment, Chr 8, ERATO Doi 233, expressed [Mus musculus] gi|26346951|dbj|BAC37124.1| ... |
| Match: gi|38016127|ref|NP_055829.1| |
score: 90.12 |
e-value: 1.8e-17 |
Identity: 37.99% |
Span: 516bp (92.3%) |
Frame: 2 |
| gi|38016127|ref|NP_055829.1| KIAA0117 protein [Homo sapiens] gi|20809545|gb|AAH29451.1| KIAA0117 protein [Homo sapiens] |
| Match: gi|37549473|ref|XP_290939.2| |
score: 90.12 |
e-value: 1.8e-17 |
Identity: 37.99% |
Span: 516bp (92.3%) |
Frame: 2 |
| gi|37549473|ref|XP_290939.2| similar to DNA segment, Chr 8, ERATO Doi 233, expressed [Homo sapiens] gi|37549825|ref|X... |
| Match: gi|19115130|ref|NP_594218.1| |
score: 88.2 |
e-value: 6.9e-17 |
Identity: 31.77% |
Span: 558bp (99.8%) |
Frame: 2 |
| gi|19115130|ref|NP_594218.1| putative RNA-binding protein [Schizosaccharomyces pombe] gi|17367899|sp|O13741|YDR6_SCHP... |
| Match: gi|34863377|ref|XP_234003.2| |
score: 83.57 |
e-value: 1.7e-15 |
Identity: 38.22% |
Span: 465bp (83.2%) |
Frame: 2 |
| gi|34863377|ref|XP_234003.2| similar to DNA segment, Chr 8, ERATO Doi 233, expressed [Rattus norvegicus] |
| Match: gi|7498869|pir||T20735 |
score: 77.03 |
e-value: 1.6e-13 |
Identity: 34.01% |
Span: 441bp (78.9%) |
Frame: 2 |
| gi|7498869|pir||T20735 hypothetical protein F11A10.2 - Caenorhabditis elegans |
| Match: gi|17539754|ref|NP_502291.1| |
score: 77.03 |
e-value: 1.6e-13 |
Identity: 34.01% |
Span: 441bp (78.9%) |
Frame: 2 |
| gi|17539754|ref|NP_502291.1| RNA-binding protein like (43.9 kD) (4M851) [Caenorhabditis elegans] gi|15718191|emb|CAC7... |
| Match: gi|34852000|ref|XP_226582.2| |
score: 75.48 |
e-value: 4.6e-13 |
Identity: 43.44% |
Span: 360bp (64.4%) |
Frame: 2 |
| gi|34852000|ref|XP_226582.2| similar to DNA segment, Chr 8, ERATO Doi 233, expressed [Rattus norvegicus] |
| Match: gi|6324532|ref|NP_014601.1| |
score: 73.17 |
e-value: 2.3e-12 |
Identity: 35.77% |
Span: 366bp (65.5%) |
Frame: 2 |
| gi|6324532|ref|NP_014601.1| Nucleolar Protein; isolated as a mutant exhibiting synthetic lethality with a nop2 ts all... |
| Match: gi|21430048|gb|AAM50702.1| |
score: 65.47 |
e-value: 4.8e-10 |
Identity: 33.14% |
Span: 501bp (89.6%) |
Frame: 2 |
| gi|21430048|gb|AAM50702.1| GM13065p [Drosophila melanogaster] |
| Match: gi|31207793|ref|XP_312863.1| |
score: 65.47 |
e-value: 4.8e-10 |
Identity: 33.12% |
Span: 480bp (85.9%) |
Frame: 2 |
| gi|31207793|ref|XP_312863.1| ENSANGP00000016667 [Anopheles gambiae] gi|21296170|gb|EAA08315.1| ENSANGP00000016667 [An... |
| Match: gi|24584762|ref|NP_609822.1| |
score: 65.08 |
e-value: 6.3e-10 |
Identity: 33.14% |
Span: 501bp (89.6%) |
Frame: 2 |
| gi|24584762|ref|NP_609822.1| CG12288-PA [Drosophila melanogaster] gi|7298360|gb|AAF53587.1| CG12288-PA [Drosophila me... |
| Match: gi|38100027|gb|EAA47238.1| |
score: 64.7 |
e-value: 8.2e-10 |
Identity: 40.38% |
Span: 306bp (54.7%) |
Frame: 2 |
| gi|38100027|gb|EAA47238.1| hypothetical protein MG11063.4 [Magnaporthe grisea 70-15] |
| Match: gi|32422159|ref|XP_331523.1| |
score: 64.7 |
e-value: 8.2e-10 |
Identity: 39.81% |
Span: 318bp (56.9%) |
Frame: 2 |
| gi|32422159|ref|XP_331523.1| hypothetical protein [Neurospora crassa] gi|28920294|gb|EAA29667.1| hypothetical protein... |
| Match: gi|31207795|ref|XP_312864.1| |
score: 61.23 |
e-value: 9e-09 |
Identity: 35.61% |
Span: 396bp (70.8%) |
Frame: 2 |
| gi|31207795|ref|XP_312864.1| ENSANGP00000016551 [Anopheles gambiae] gi|21296237|gb|EAA08382.1| ENSANGP00000016551 [An... |
| Match: gi|38109806|gb|EAA55617.1| |
score: 46.98 |
e-value: 0.00018 |
Identity: 28.66% |
Span: 438bp (78.4%) |
Frame: 2 |
| gi|38109806|gb|EAA55617.1| hypothetical protein MG01268.4 [Magnaporthe grisea 70-15] |
| Match: gi|464252|sp|P20397|NUCL_XENLA |
score: 46.59 |
e-value: 0.00023 |
Identity: 22.62% |
Span: 504bp (90.2%) |
Frame: 2 |
| gi|464252|sp|P20397|NUCL_XENLA Nucleolin (Protein C23) gi|104148|pir||S18874 nucleolin - African clawed frog gi|64937... |
| Match: gi|33359635|gb|AAQ17065.1| |
score: 46.21 |
e-value: 0.0003 |
Identity: 25.32% |
Span: 474bp (84.8%) |
Frame: 2 |
| gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio] gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio] |
| Match: gi|15233246|ref|NP_191094.1| |
score: 45.82 |
e-value: 0.00039 |
Identity: 28.57% |
Span: 252bp (45.1%) |
Frame: 2 |
| PHIP1 (PHRAGMOPLASTIN INTERACTING PROTEIN 1); RNA binding / mRNA binding [Arabidopsis thaliana] >gi7019667|emb|CAB757... |
| Match: gi|18026763|gb|AAL55607.1| |
score: 45.82 |
e-value: 0.00039 |
Identity: 28.57% |
Span: 252bp (45.1%) |
Frame: 2 |
| gi|18026763|gb|AAL55607.1| phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana] |
| Match: gi|33359633|gb|AAQ17064.1| |
score: 45.05 |
e-value: 0.00067 |
Identity: 25.32% |
Span: 474bp (84.8%) |
Frame: 2 |
| gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio] |
| Match: gi|19114443|ref|NP_593531.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 27.03% |
Span: 417bp (74.6%) |
Frame: 2 |
| gi|19114443|ref|NP_593531.1| gar2 protein [Schizosaccharomyces pombe] gi|6226864|sp|P41891|GAR2_SCHPO Protein gar2 gi... |
| Match: gi|31218718|ref|XP_316702.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 28.78% |
Span: 417bp (74.6%) |
Frame: 2 |
| gi|31218718|ref|XP_316702.1| ENSANGP00000002641 [Anopheles gambiae] gi|21299284|gb|EAA11429.1| ENSANGP00000002641 [An... |
| Match: gi|784909|dbj|BAA07210.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 28.95% |
Span: 456bp (81.6%) |
Frame: 2 |
| gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori] |
| Match: gi|2130461|pir||S55785 |
score: 43.51 |
e-value: 0.002 |
Identity: 27.03% |
Span: 417bp (74.6%) |
Frame: 2 |
| gi|2130461|pir||S55785 nucleolar protein gar2 - fission yeast (Schizosaccharomyces pombe) gi|663262|emb|CAA88179.1| g... |
| Match: gi|1465873|dbj|BAA07211.1| |
score: 43.51 |
e-value: 0.002 |
Identity: 28.95% |
Span: 456bp (81.6%) |
Frame: 2 |
| gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori] |
| Match: gi|27804344|gb|AAO22235.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 32.86% |
Span: 210bp (37.6%) |
Frame: 2 |
| gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio] |
| Match: gi|17432522|gb|AAL39067.1| |
score: 43.13 |
e-value: 0.003 |
Identity: 27.54% |
Span: 459bp (82.1%) |
Frame: 2 |
| gi|17432522|gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum] |
| Match: gi|422617|pir||S32644 |
score: 42.36 |
e-value: 0.004 |
Identity: 28% |
Span: 225bp (40.3%) |
Frame: 2 |
| gi|422617|pir||S32644 nucleolin - African clawed frog gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis] |
| Match: gi|1350820|sp|P49313|ROC1_NICPL |
score: 41.97 |
e-value: 0.006 |
Identity: 25.6% |
Span: 459bp (82.1%) |
Frame: 2 |
| gi|1350820|sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30) gi|280402|pir||S26203 RNA-... |
| Match: gi|18921322|gb|AAL82527.1| |
score: 41.59 |
e-value: 0.007 |
Identity: 27.03% |
Span: 441bp (78.9%) |
Frame: 2 |
| gi|18921322|gb|AAL82527.1| putative ribonucleoprotein [Oryza sativa] |
| Match: gi|12230584|sp|Q08935|ROC1_NICSY |
score: 41.2 |
e-value: 0.01 |
Identity: 25.31% |
Span: 459bp (82.1%) |
Frame: 2 |
| gi|12230584|sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) gi|100293|pir||S20069 ribo... |
| Match: gi|6178156|dbj|BAA86200.1| |
score: 40.82 |
e-value: 0.013 |
Identity: 33.33% |
Span: 228bp (40.8%) |
Frame: 2 |
| gi|6178156|dbj|BAA86200.1| nucleolin like protein CiRGG1 [Ciona intestinalis] |
| Match: gi|31207791|ref|XP_312862.1| |
score: 40.82 |
e-value: 0.013 |
Identity: 33% |
Span: 300bp (53.7%) |
Frame: 2 |
| gi|31207791|ref|XP_312862.1| ENSANGP00000024370 [Anopheles gambiae] gi|30177197|gb|EAA44783.1| ENSANGP00000024370 [An... |
| Match: gi|15240641|ref|NP_199836.1| |
score: 40.43 |
e-value: 0.017 |
Identity: 28.72% |
Span: 282bp (50.4%) |
Frame: 2 |
| gi|15240641|ref|NP_199836.1| 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1... |
| Match: gi|133247|sp|P28644|ROC1_SPIOL |
score: 40.43 |
e-value: 0.017 |
Identity: 29.67% |
Span: 264bp (47.2%) |
Frame: 2 |
| gi|133247|sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP) |
| Match: gi|21309|emb|CAA41023.1| |
score: 40.43 |
e-value: 0.017 |
Identity: 29.67% |
Span: 264bp (47.2%) |
Frame: 2 |
| 28kD RNA binding protein [Spinacia oleracea] |
| Match: gi|99565|pir||S15348 |
score: 40.43 |
e-value: 0.017 |
Identity: 29.67% |
Span: 264bp (47.2%) |
Frame: 2 |
| gi|99565|pir||S15348 RNA-binding protein, 28K - spinach |
| Match: gi|34534595|dbj|BAC87055.1| |
score: 40.05 |
e-value: 0.022 |
Identity: 33.33% |
Span: 273bp (48.8%) |
Frame: 2 |
| gi|34534595|dbj|BAC87055.1| unnamed protein product [Homo sapiens] |
| Match: gi|12018306|ref|NP_072143.1| |
score: 40.05 |
e-value: 0.022 |
Identity: 33.33% |
Span: 273bp (48.8%) |
Frame: 2 |
| gi|12018306|ref|NP_072143.1| nucleolin-related protein [Rattus norvegicus] gi|5929884|gb|AAD56625.1| nucleolin-relate... |
| Match: gi|4885511|ref|NP_005372.1| |
score: 40.05 |
e-value: 0.022 |
Identity: 33.33% |
Span: 273bp (48.8%) |
Frame: 2 |
| gi|4885511|ref|NP_005372.1| nucleolin [Homo sapiens] gi|128841|sp|P19338|NUCL_HUMAN Nucleolin (Protein C23) gi|107222... |
| Match: gi|31455187|gb|AAH06494.3| |
score: 40.05 |
e-value: 0.022 |
Identity: 33.33% |
Span: 273bp (48.8%) |
Frame: 2 |
| gi|31455187|gb|AAH06494.3| NCL protein [Homo sapiens] gi|31455191|gb|AAH06516.3| NCL protein [Homo sapiens] gi|314552... |
| Match: gi|6324155|ref|NP_014224.1| |
score: 39.66 |
e-value: 0.028 |
Identity: 25.77% |
Span: 480bp (85.9%) |
Frame: 2 |
| gi|6324155|ref|NP_014224.1| Nucleolar Protein 13; Nop13p [Saccharomyces cerevisiae] gi|1730806|sp|P53883|YNR5_YEAST H... |
| Match: gi|1076251|pir||S50765 |
score: 39.28 |
e-value: 0.037 |
Identity: 29.55% |
Span: 264bp (47.2%) |
Frame: 2 |
| gi|1076251|pir||S50765 RNA-binding protein - common ice plant gi|388621|gb|AAA33039.1| RNA-binding protein |
| Match: gi|27804344|gb|AAO22235.1| |
score: 39.28 |
e-value: 0.037 |
Identity: 29.67% |
Span: 270bp (48.3%) |
Frame: 2 |
| gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio] |
| Match: gi|17538232|ref|NP_502136.1| |
score: 39.28 |
e-value: 0.037 |
Identity: 34.57% |
Span: 234bp (41.9%) |
Frame: 2 |
| gi|17538232|ref|NP_502136.1| squamous cell carcinoma antigen recognized by T-cells 3 like (95.4 kD) (4M96) [Caenorhab... |
| Match: gi|38344339|emb|CAD41755.2| |
score: 38.89 |
e-value: 0.048 |
Identity: 25.53% |
Span: 282bp (50.4%) |
Frame: 2 |
| gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7417424|gb|AAF62554.1| |
score: 38.89 |
e-value: 0.048 |
Identity: 21.74% |
Span: 483bp (86.4%) |
Frame: 2 |
| gi|7417424|gb|AAF62554.1| nucleolin [Oncorhynchus mykiss] |
| Match: gi|6324132|ref|NP_014202.1| |
score: 38.51 |
e-value: 0.063 |
Identity: 28.16% |
Span: 309bp (55.3%) |
Frame: 2 |
| gi|6324132|ref|NP_014202.1| Protein involved in regulation of cell size; Whi3p [Saccharomyces cerevisiae] gi|465481|s... |
| Match: gi|33359635|gb|AAQ17065.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 28.57% |
Span: 270bp (48.3%) |
Frame: 2 |
| gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio] gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio] |
| Match: gi|32420169|ref|XP_330528.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 26.23% |
Span: 519bp (92.8%) |
Frame: 2 |
| gi|32420169|ref|XP_330528.1| hypothetical protein [Neurospora crassa] gi|28925605|gb|EAA34626.1| hypothetical protein... |
| Match: gi|34915990|ref|NP_919248.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 41.46% |
Span: 123bp (22.0%) |
Frame: 2 |
| gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens] gi|34485858|gb|AAQ73311.1| R... |
| Match: gi|19075873|ref|NP_588373.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 25.93% |
Span: 468bp (83.7%) |
Frame: 2 |
| gi|19075873|ref|NP_588373.1| RNA-binding protein [Schizosaccharomyces pombe] gi|6136683|sp|O13674|YCQ9_SCHPO Hypothet... |
| Match: gi|1438951|gb|AAB04133.1| |
score: 38.12 |
e-value: 0.082 |
Identity: 24.7% |
Span: 498bp (89.1%) |
Frame: 2 |
| gi|1438951|gb|AAB04133.1| cutinase negative acting protein |
|
| arabidopsis/peptide [blastx] | Showing best 14 hits recorded |
| Match: At5g46840.1 |
score: 234.2 |
e-value: 3e-62 |
Identity: 70% |
Span: 537bp (96.1%) |
Frame: 2 |
| At5g46840.1 68412.m05200 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g55340.1 |
score: 45.82 |
e-value: 1.5e-05 |
Identity: 28.57% |
Span: 252bp (45.1%) |
Frame: 2 |
| At3g55340.1 68410.m05676 RNA recognition motif (RRM) - containing protein low similarity to nucleolar phosphoprotein ... |
| Match: At5g50250.1 |
score: 40.43 |
e-value: 0.00064 |
Identity: 28.72% |
Span: 282bp (50.4%) |
Frame: 2 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g52150.1 |
score: 37.35 |
e-value: 0.005 |
Identity: 27.21% |
Span: 420bp (75.1%) |
Frame: 2 |
| At3g52150.1 68410.m05303 RNA recognition motif (RRM) - containing protein similar to chloroplast RNA-binding protein ... |
| Match: At4g24770.1 |
score: 36.58 |
e-value: 0.009 |
Identity: 27.66% |
Span: 282bp (50.4%) |
Frame: 2 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At2g37220.1 |
score: 36.19 |
e-value: 0.012 |
Identity: 26.77% |
Span: 366bp (65.5%) |
Frame: 2 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At5g40490.1 |
score: 36.19 |
e-value: 0.012 |
Identity: 23.03% |
Span: 456bp (81.6%) |
Frame: 2 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At1g71770.1 |
score: 35.81 |
e-value: 0.016 |
Identity: 24.54% |
Span: 486bp (86.9%) |
Frame: 2 |
| At1g71770.1 68408.m07610 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] |
| Match: At2g21440.1 |
score: 35.42 |
e-value: 0.021 |
Identity: 31.08% |
Span: 222bp (39.7%) |
Frame: 2 |
| At2g21440.1 68409.m02310 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g18610.1 |
score: 35.42 |
e-value: 0.021 |
Identity: 23.35% |
Span: 477bp (85.3%) |
Frame: 2 |
| At3g18610.1 68410.m02135 nucleolin, putative contains Pfam profile: PF00076 RNA recognition motif |
| Match: At3g21215.1 |
score: 35.04 |
e-value: 0.027 |
Identity: 34.04% |
Span: 141bp (25.2%) |
Frame: 2 |
| At3g21215.1 68410.m02431 RNA binding protein, putative contains RNA recognition motif, Pfam:PF00076; contains AT-AC s... |
| Match: At1g22760.1 |
score: 33.88 |
e-value: 0.06 |
Identity: 27.67% |
Span: 456bp (81.6%) |
Frame: 2 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At2g15190.1 |
score: 33.88 |
e-value: 0.06 |
Identity: 31.03% |
Span: 174bp (31.1%) |
Frame: 2 |
| At2g15190.1 68409.m01551 Ulp1 protease family contains Pfam profile PF02902: Ulp1 protease family, C-terminal catalyt... |
| Match: At2g42240.1 |
score: 33.5 |
e-value: 0.079 |
Identity: 48.48% |
Span: 99bp (17.7%) |
Frame: 2 |
| At2g42240.1 68409.m04725 RNA recognition motif (RRM) - containing protein similar to RNA-binding protein (Hermes) fro... |
|
