| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|34904884|ref|NP_913789.1| |
score: 85.11 |
e-value: 1e-19 |
Identity: 44.19% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|34904884|ref|NP_913789.1| similar to reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|24417209|db... |
| Match: gi|37534700|ref|NP_921652.1| |
score: 82.42 |
e-value: 2.9e-19 |
Identity: 43.02% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|37534700|ref|NP_921652.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|34902484|ref|NP_912588.1| |
score: 79.34 |
e-value: 4.7e-20 |
Identity: 41.86% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|34902484|ref|NP_912588.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|34896410|ref|NP_909549.1| |
score: 76.26 |
e-value: 2.8e-13 |
Identity: 40.7% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|34896410|ref|NP_909549.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|27764659|gb|A... |
| Match: gi|21741977|emb|CAD41785.1| |
score: 75.87 |
e-value: 2.5e-17 |
Identity: 37.21% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa (japonica cultivar-group)] gi|38346911|emb|CAE03883.2| OSJN... |
| Match: gi|32487797|emb|CAE05420.1| |
score: 73.94 |
e-value: 1.4e-12 |
Identity: 42.17% |
Span: 249bp (45.3%) |
Frame: 2 |
| gi|32487797|emb|CAE05420.1| OSJNBa0035I04.8 [Oryza sativa (japonica cultivar-group)] gi|38347531|emb|CAE05956.2| OSJN... |
| Match: gi|34906350|ref|NP_914522.1| |
score: 73.17 |
e-value: 1.5e-17 |
Identity: 39.29% |
Span: 252bp (45.8%) |
Frame: 2 |
| gi|34906350|ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|9558497|dbj|BAB03416... |
| Match: gi|29824482|gb|AAP04197.1| |
score: 70.86 |
e-value: 1.2e-11 |
Identity: 37.14% |
Span: 267bp (48.5%) |
Frame: 2 |
| gi|29824482|gb|AAP04197.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|22327414|ref|NP_680357.1| |
score: 70.86 |
e-value: 3.3e-12 |
Identity: 38.1% |
Span: 312bp (56.7%) |
Frame: 2 |
| gi|22327414|ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis thaliana] |
| Match: gi|25408124|pir||C84716 |
score: 67.01 |
e-value: 1.2e-11 |
Identity: 35.48% |
Span: 270bp (49.1%) |
Frame: 2 |
| gi|25408124|pir||C84716 hypothetical protein At2g31080 [imported] - Arabidopsis thaliana gi|3746069|gb|AAC63844.1| pu... |
| Match: gi|39546208|emb|CAE04633.3| |
score: 65.08 |
e-value: 1.7e-15 |
Identity: 36.78% |
Span: 252bp (45.8%) |
Frame: 2 |
| gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7485171|pir||G71420 |
score: 64.31 |
e-value: 1.1e-09 |
Identity: 36.25% |
Span: 240bp (43.6%) |
Frame: 2 |
| gi|7485171|pir||G71420 hypothetical protein - Arabidopsis thaliana gi|2244915|emb|CAB10337.1| reverse transcriptase l... |
| Match: gi|25407453|pir||H85088 |
score: 62.77 |
e-value: 3.2e-09 |
Identity: 42.5% |
Span: 240bp (43.6%) |
Frame: 2 |
| gi|25407453|pir||H85088 hypothetical protein AT4g08830 [imported] - Arabidopsis thaliana gi|7267526|emb|CAB78008.1| p... |
| Match: gi|37530704|ref|NP_919654.1| |
score: 62.39 |
e-value: 2e-13 |
Identity: 33.33% |
Span: 207bp (37.6%) |
Frame: 2 |
| gi|37530704|ref|NP_919654.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|38346631|emb|CAD40747.2| |
score: 62 |
e-value: 5.5e-09 |
Identity: 46.55% |
Span: 174bp (31.6%) |
Frame: 2 |
| gi|38346631|emb|CAD40747.2| OSJNBa0072D21.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|8096424|dbj|BAA95894.1| |
score: 61.23 |
e-value: 8.9e-13 |
Identity: 34.78% |
Span: 207bp (37.6%) |
Frame: 2 |
| gi|8096424|dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC F13B15; putative non-LTR retroelement reve... |
| Match: gi|25403380|pir||H86435 |
score: 60.85 |
e-value: 1.2e-08 |
Identity: 32.41% |
Span: 321bp (58.4%) |
Frame: 2 |
| gi|25403380|pir||H86435 protein F17F8.5 [imported] - Arabidopsis thaliana gi|9755374|gb|AAF98181.1| F17F8.5 [Arabidop... |
| Match: gi|29126371|gb|AAO66563.1| |
score: 60.08 |
e-value: 2.2e-11 |
Identity: 38.46% |
Span: 267bp (48.5%) |
Frame: 2 |
| gi|29126371|gb|AAO66563.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34911706|ref|NP_917200.1| |
score: 59.69 |
e-value: 5.8e-11 |
Identity: 31.82% |
Span: 318bp (57.8%) |
Frame: 2 |
| gi|34911706|ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-group)] gi|13603432|dbj|BAB40159.1| P0707D1... |
| Match: gi|20042969|gb|AAM08777.1| |
score: 58.92 |
e-value: 4.7e-08 |
Identity: 37.36% |
Span: 273bp (49.6%) |
Frame: 2 |
| gi|20042969|gb|AAM08777.1| Putative retroelement [Oryza sativa] |
| Match: gi|37534366|ref|NP_921485.1| |
score: 58.92 |
e-value: 4.7e-08 |
Identity: 37.36% |
Span: 273bp (49.6%) |
Frame: 2 |
| gi|37534366|ref|NP_921485.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|37531298|ref|NP_919951.1| |
score: 58.54 |
e-value: 4.5e-11 |
Identity: 33.33% |
Span: 207bp (37.6%) |
Frame: 2 |
| gi|37531298|ref|NP_919951.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22655797|gb|AAN04214.1... |
| Match: gi|25411313|pir||C84487 |
score: 57.77 |
e-value: 1.3e-09 |
Identity: 34.52% |
Span: 252bp (45.8%) |
Frame: 2 |
| gi|25411313|pir||C84487 hypothetical protein At2g07650 [imported] - Arabidopsis thaliana gi|5001454|gb|AAD37021.1| pu... |
| Match: gi|25403016|pir||D86384 |
score: 57.38 |
e-value: 1.4e-07 |
Identity: 36.49% |
Span: 222bp (40.4%) |
Frame: 2 |
| gi|25403016|pir||D86384 unknown protein [imported] - Arabidopsis thaliana gi|12321503|gb|AAG50806.1| unknown protein ... |
| Match: gi|38346464|emb|CAD39568.2| |
score: 57.38 |
e-value: 1.8e-14 |
Identity: 40.28% |
Span: 216bp (39.3%) |
Frame: 2 |
| gi|38346464|emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530430|ref|NP_919517.1| |
score: 57.38 |
e-value: 1.4e-07 |
Identity: 41.07% |
Span: 168bp (30.5%) |
Frame: 2 |
| gi|37530430|ref|NP_919517.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|19920067|gb|AAM08499.1... |
| Match: gi|18568267|gb|AAL75999.1| |
score: 57.38 |
e-value: 1.4e-07 |
Identity: 31.82% |
Span: 327bp (59.5%) |
Frame: 2 |
| gi|18568267|gb|AAL75999.1| putative polyprotein [Zea mays] |
| Match: gi|7486147|pir||T04278 |
score: 56.61 |
e-value: 2.3e-07 |
Identity: 31.4% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|7486147|pir||T04278 hypothetical protein F25I24.40 - Arabidopsis thaliana gi|4539357|emb|CAB40051.1| putative prot... |
| Match: gi|7486711|pir||T01893 |
score: 56.61 |
e-value: 2.3e-07 |
Identity: 31.4% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|7486711|pir||T01893 hypothetical protein F8M12.22 - Arabidopsis thaliana gi|3513745|gb|AAC33961.1| contains simila... |
| Match: gi|37531766|ref|NP_920185.1| |
score: 56.22 |
e-value: 3e-07 |
Identity: 35.56% |
Span: 267bp (48.5%) |
Frame: 2 |
| gi|37531766|ref|NP_920185.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|38345965|emb|CAE04048.2| |
score: 56.22 |
e-value: 3e-07 |
Identity: 38.1% |
Span: 243bp (44.2%) |
Frame: 2 |
| gi|38345965|emb|CAE04048.2| OSJNBb0062B06.6 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25405497|pir||E96556 |
score: 55.84 |
e-value: 3.9e-07 |
Identity: 29.13% |
Span: 309bp (56.2%) |
Frame: 2 |
| gi|25405497|pir||E96556 hypothetical protein F19C24.27 [imported] - Arabidopsis thaliana gi|12321684|gb|AAG50886.1| h... |
| Match: gi|32487309|emb|CAE05800.1| |
score: 55.84 |
e-value: 3.9e-07 |
Identity: 44.62% |
Span: 192bp (34.9%) |
Frame: 2 |
| gi|32487309|emb|CAE05800.1| OSJNBb0046K02.10 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37532946|ref|NP_920775.1| |
score: 55.45 |
e-value: 9.2e-13 |
Identity: 39.68% |
Span: 189bp (34.4%) |
Frame: 2 |
| gi|37532946|ref|NP_920775.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|31431254|gb|AAP53062.1... |
| Match: gi|15451617|gb|AAK98741.1| |
score: 55.45 |
e-value: 5.2e-07 |
Identity: 45.59% |
Span: 201bp (36.5%) |
Frame: 2 |
| gi|15451617|gb|AAK98741.1| Hypothetical protein similar to putative retroelements [Oryza sativa] gi|27497213|gb|AAO17... |
| Match: gi|25411819|pir||H84557 |
score: 55.45 |
e-value: 1.8e-08 |
Identity: 28.04% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25411819|pir||H84557 hypothetical protein At2g17910 [imported] - Arabidopsis thaliana gi|6598399|gb|AAD03565.2| pu... |
| Match: gi|34896720|ref|NP_909704.1| |
score: 55.45 |
e-value: 5.2e-07 |
Identity: 40.54% |
Span: 213bp (38.7%) |
Frame: 2 |
| gi|34896720|ref|NP_909704.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|28269466|gb|A... |
| Match: gi|7488319|pir||T00833 |
score: 55.45 |
e-value: 1.8e-08 |
Identity: 28.04% |
Span: 315bp (57.3%) |
Frame: 2 |
| RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana (fragment) |
| Match: gi|37534230|ref|NP_921417.1| |
score: 55.45 |
e-value: 3.7e-10 |
Identity: 38.55% |
Span: 246bp (44.7%) |
Frame: 2 |
| gi|37534230|ref|NP_921417.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa (japonica cultivar-gr... |
| Match: gi|38344358|emb|CAE04079.2| |
score: 55.45 |
e-value: 5.2e-07 |
Identity: 53.33% |
Span: 135bp (24.5%) |
Frame: 2 |
| gi|38344358|emb|CAE04079.2| OSJNBb0032D24.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346584|emb|CAE04648.2| |
score: 55.07 |
e-value: 1e-11 |
Identity: 35.87% |
Span: 267bp (48.5%) |
Frame: 2 |
| gi|38346584|emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411174|pir||H84469 |
score: 53.91 |
e-value: 1.8e-07 |
Identity: 32.71% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25411174|pir||H84469 hypothetical protein At2g05550 [imported] - Arabidopsis thaliana gi|4581169|gb|AAD24652.1| pu... |
| Match: gi|34906774|ref|NP_914734.1| |
score: 53.53 |
e-value: 3.9e-08 |
Identity: 35% |
Span: 297bp (54.0%) |
Frame: 2 |
| gi|34906774|ref|NP_914734.1| gag-pol polyprotein -like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|33465891|gb|AAQ19327.1| |
score: 53.14 |
e-value: 2.9e-08 |
Identity: 28.44% |
Span: 318bp (57.8%) |
Frame: 2 |
| gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37536206|ref|NP_922405.1| |
score: 52.37 |
e-value: 3.8e-08 |
Identity: 32.53% |
Span: 249bp (45.3%) |
Frame: 2 |
| gi|37536206|ref|NP_922405.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|27311287|gb|A... |
| Match: gi|9758157|dbj|BAB08714.1| |
score: 51.99 |
e-value: 2.4e-07 |
Identity: 27.62% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|9758157|dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] |
| Match: gi|9293911|dbj|BAB01814.1| |
score: 51.99 |
e-value: 1.2e-07 |
Identity: 27.27% |
Span: 297bp (54.0%) |
Frame: 2 |
| gi|9293911|dbj|BAB01814.1| contains similarity to non-LTR retroelement reverse transcriptase~gene_id:MXO21.2 [Arabido... |
| Match: gi|21740636|emb|CAD40197.1| |
score: 50.83 |
e-value: 1.3e-09 |
Identity: 32.63% |
Span: 279bp (50.7%) |
Frame: 2 |
| gi|21740636|emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25405244|pir||E96519 |
score: 50.83 |
e-value: 8.4e-08 |
Identity: 27.1% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25405244|pir||E96519 probable reverse transcriptase, 16838-20266 [imported] - Arabidopsis thaliana gi|12323627|gb|... |
| Match: gi|25411392|pir||B84497 |
score: 50.83 |
e-value: 4e-07 |
Identity: 29.52% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25411392|pir||B84497 hypothetical protein At2g11240 [imported] - Arabidopsis thaliana gi|4263655|gb|AAD15377.1| pu... |
| Match: gi|31044099|dbj|BAC15618.2| |
score: 50.45 |
e-value: 3e-08 |
Identity: 33% |
Span: 297bp (54.0%) |
Frame: 2 |
| gi|31044099|dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25408936|pir||A84888 |
score: 50.06 |
e-value: 8.6e-07 |
Identity: 24.76% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25408936|pir||A84888 hypothetical protein At2g45230 [imported] - Arabidopsis thaliana gi|2583130|gb|AAB82639.1| pu... |
| Match: gi|37536094|ref|NP_922349.1| |
score: 50.06 |
e-value: 2.4e-07 |
Identity: 27.52% |
Span: 318bp (57.8%) |
Frame: 2 |
| gi|37536094|ref|NP_922349.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13786450|gb|A... |
| Match: gi|37535220|ref|NP_921912.1| |
score: 49.29 |
e-value: 5.3e-07 |
Identity: 38.1% |
Span: 186bp (33.8%) |
Frame: 2 |
| gi|37535220|ref|NP_921912.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13489171|gb|A... |
| Match: gi|7487391|pir||T01474 |
score: 49.29 |
e-value: 6.7e-07 |
Identity: 26.74% |
Span: 258bp (46.9%) |
Frame: 2 |
| gi|7487391|pir||T01474 hypothetical protein T24H24.17 - Arabidopsis thaliana gi|3377824|gb|AAC28197.1| contains simil... |
| Match: gi|25405885|pir||G96509 |
score: 47.37 |
e-value: 2.4e-07 |
Identity: 26.17% |
Span: 315bp (57.3%) |
Frame: 2 |
| gi|25405885|pir||G96509 protein F27F5.21 [imported] - Arabidopsis thaliana gi|7767672|gb|AAF69169.1| F27F5.21 [Arabid... |
| Match: gi|22711564|gb|AAM01179.2| |
score: 47.37 |
e-value: 1.1e-06 |
Identity: 29.09% |
Span: 318bp (57.8%) |
Frame: 2 |
| gi|22711564|gb|AAM01179.2| Putative retroelement [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411805|pir||C84554 |
score: 45.05 |
e-value: 3.1e-07 |
Identity: 31.71% |
Span: 246bp (44.7%) |
Frame: 2 |
| gi|25411805|pir||C84554 hypothetical protein At2g17610 [imported] - Arabidopsis thaliana gi|4926870|gb|AAD32950.1| pu... |
| Match: gi|38346464|emb|CAD39568.2| |
score: 43.13 |
e-value: 1.8e-14 |
Identity: 37.14% |
Span: 204bp (37.1%) |
Frame: 3 |
| gi|38346464|emb|CAD39568.2| OSJNBa0019G23.12 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34901574|ref|NP_912133.1| |
score: 41.97 |
e-value: 8.6e-08 |
Identity: 35.48% |
Span: 183bp (33.3%) |
Frame: 2 |
| gi|34901574|ref|NP_912133.1| P0571D04.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34902484|ref|NP_912588.1| |
score: 40.05 |
e-value: 4.7e-20 |
Identity: 36.76% |
Span: 204bp (37.1%) |
Frame: 3 |
| gi|34902484|ref|NP_912588.1| Putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|37532946|ref|NP_920775.1| |
score: 39.28 |
e-value: 9.2e-13 |
Identity: 36.76% |
Span: 204bp (37.1%) |
Frame: 3 |
| gi|37532946|ref|NP_920775.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|31431254|gb|AAP53062.1... |
| Match: gi|39546208|emb|CAE04633.3| |
score: 38.89 |
e-value: 1.7e-15 |
Identity: 35.29% |
Span: 204bp (37.1%) |
Frame: 3 |
| gi|39546208|emb|CAE04633.3| OSJNBa0028I23.15 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|34906350|ref|NP_914522.1| |
score: 37.74 |
e-value: 1.5e-17 |
Identity: 35.71% |
Span: 204bp (37.1%) |
Frame: 3 |
| gi|34906350|ref|NP_914522.1| unnamed protein product [Oryza sativa (japonica cultivar-group)] gi|9558497|dbj|BAB03416... |
| Match: gi|34901574|ref|NP_912133.1| |
score: 35.81 |
e-value: 8.6e-08 |
Identity: 55.17% |
Span: 87bp (15.8%) |
Frame: 3 |
| gi|34901574|ref|NP_912133.1| P0571D04.1 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37530704|ref|NP_919654.1| |
score: 34.65 |
e-value: 2e-13 |
Identity: 48.57% |
Span: 105bp (19.1%) |
Frame: 3 |
| gi|37530704|ref|NP_919654.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|37534700|ref|NP_921652.1| |
score: 34.27 |
e-value: 2.9e-19 |
Identity: 33.33% |
Span: 171bp (31.1%) |
Frame: 3 |
| gi|37534700|ref|NP_921652.1| putative non-LTR retroelement reverse transcriptase [Oryza sativa (japonica cultivar-gro... |
| Match: gi|21741977|emb|CAD41785.1| |
score: 34.27 |
e-value: 2.5e-17 |
Identity: 33.33% |
Span: 174bp (31.6%) |
Frame: 3 |
| gi|21741977|emb|CAD41785.1| OSJNBa0035M09.1 [Oryza sativa (japonica cultivar-group)] gi|38346911|emb|CAE03883.2| OSJN... |
| Match: gi|8096424|dbj|BAA95894.1| |
score: 33.5 |
e-value: 8.9e-13 |
Identity: 31.75% |
Span: 189bp (34.4%) |
Frame: 3 |
| gi|8096424|dbj|BAA95894.1| Similar to Arabidopsis thaliana chromosome2 BAC F13B15; putative non-LTR retroelement reve... |
| Match: gi|34904884|ref|NP_913789.1| |
score: 33.11 |
e-value: 1e-19 |
Identity: 35.09% |
Span: 171bp (31.1%) |
Frame: 3 |
| gi|34904884|ref|NP_913789.1| similar to reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|24417209|db... |
| Match: gi|25411805|pir||C84554 |
score: 30.8 |
e-value: 3.1e-07 |
Identity: 28.57% |
Span: 210bp (38.2%) |
Frame: 3 |
| gi|25411805|pir||C84554 hypothetical protein At2g17610 [imported] - Arabidopsis thaliana gi|4926870|gb|AAD32950.1| pu... |
| Match: gi|37531298|ref|NP_919951.1| |
score: 30.42 |
e-value: 4.5e-11 |
Identity: 26.98% |
Span: 189bp (34.4%) |
Frame: 3 |
| gi|37531298|ref|NP_919951.1| putative retroelement [Oryza sativa (japonica cultivar-group)] gi|22655797|gb|AAN04214.1... |
| Match: gi|37534230|ref|NP_921417.1| |
score: 30.42 |
e-value: 3.7e-10 |
Identity: 53.85% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|37534230|ref|NP_921417.1| contains similarity to non-LTR reverse transcriptase [Oryza sativa (japonica cultivar-gr... |
| Match: gi|25405885|pir||G96509 |
score: 28.88 |
e-value: 2.4e-07 |
Identity: 29.17% |
Span: 216bp (39.3%) |
Frame: 3 |
| gi|25405885|pir||G96509 protein F27F5.21 [imported] - Arabidopsis thaliana gi|7767672|gb|AAF69169.1| F27F5.21 [Arabid... |
| Match: gi|34911706|ref|NP_917200.1| |
score: 28.88 |
e-value: 5.8e-11 |
Identity: 45.83% |
Span: 72bp (13.1%) |
Frame: 3 |
| gi|34911706|ref|NP_917200.1| P0707D10.17 [Oryza sativa (japonica cultivar-group)] gi|13603432|dbj|BAB40159.1| P0707D1... |
| Match: gi|31044099|dbj|BAC15618.2| |
score: 28.88 |
e-value: 3e-08 |
Identity: 42.31% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|31044099|dbj|BAC15618.2| unnamed protein product [Oryza sativa (japonica cultivar-group)] |
| Match: gi|21740636|emb|CAD40197.1| |
score: 28.49 |
e-value: 1.3e-09 |
Identity: 54.55% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|21740636|emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346584|emb|CAE04648.2| |
score: 28.49 |
e-value: 1e-11 |
Identity: 42.59% |
Span: 162bp (29.5%) |
Frame: 1 |
| gi|38346584|emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|29126371|gb|AAO66563.1| |
score: 27.34 |
e-value: 2.2e-11 |
Identity: 54.55% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|29126371|gb|AAO66563.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|38346584|emb|CAE04648.2| |
score: 26.95 |
e-value: 1e-11 |
Identity: 57.89% |
Span: 57bp (10.4%) |
Frame: 3 |
| gi|38346584|emb|CAE04648.2| OSJNBa0061G20.4 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25405244|pir||E96519 |
score: 26.95 |
e-value: 8.4e-08 |
Identity: 27.78% |
Span: 216bp (39.3%) |
Frame: 3 |
| gi|25405244|pir||E96519 probable reverse transcriptase, 16838-20266 [imported] - Arabidopsis thaliana gi|12323627|gb|... |
| Match: gi|37536206|ref|NP_922405.1| |
score: 26.56 |
e-value: 3.8e-08 |
Identity: 45.45% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|37536206|ref|NP_922405.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|27311287|gb|A... |
| Match: gi|37536094|ref|NP_922349.1| |
score: 26.18 |
e-value: 2.4e-07 |
Identity: 45.45% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|37536094|ref|NP_922349.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13786450|gb|A... |
| Match: gi|33465891|gb|AAQ19327.1| |
score: 26.18 |
e-value: 2.9e-08 |
Identity: 45.45% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|37535220|ref|NP_921912.1| |
score: 25.79 |
e-value: 5.3e-07 |
Identity: 52.17% |
Span: 69bp (12.5%) |
Frame: 3 |
| gi|37535220|ref|NP_921912.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] gi|13489171|gb|A... |
| Match: gi|9293911|dbj|BAB01814.1| |
score: 25.41 |
e-value: 1.2e-07 |
Identity: 50% |
Span: 66bp (12.0%) |
Frame: 3 |
| gi|9293911|dbj|BAB01814.1| contains similarity to non-LTR retroelement reverse transcriptase~gene_id:MXO21.2 [Arabido... |
| Match: gi|34906774|ref|NP_914734.1| |
score: 25.41 |
e-value: 3.9e-08 |
Identity: 34.62% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|34906774|ref|NP_914734.1| gag-pol polyprotein -like [Oryza sativa (japonica cultivar-group)] |
| Match: gi|7487391|pir||T01474 |
score: 25.41 |
e-value: 6.7e-07 |
Identity: 28.12% |
Span: 96bp (17.5%) |
Frame: 3 |
| gi|7487391|pir||T01474 hypothetical protein T24H24.17 - Arabidopsis thaliana gi|3377824|gb|AAC28197.1| contains simil... |
| Match: gi|25411819|pir||H84557 |
score: 24.64 |
e-value: 1.8e-08 |
Identity: 26.39% |
Span: 216bp (39.3%) |
Frame: 3 |
| gi|25411819|pir||H84557 hypothetical protein At2g17910 [imported] - Arabidopsis thaliana gi|6598399|gb|AAD03565.2| pu... |
| Match: gi|25411392|pir||B84497 |
score: 24.64 |
e-value: 4e-07 |
Identity: 30.23% |
Span: 129bp (23.5%) |
Frame: 3 |
| gi|25411392|pir||B84497 hypothetical protein At2g11240 [imported] - Arabidopsis thaliana gi|4263655|gb|AAD15377.1| pu... |
| Match: gi|7488319|pir||T00833 |
score: 24.64 |
e-value: 1.8e-08 |
Identity: 26.39% |
Span: 216bp (39.3%) |
Frame: 3 |
| RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana (fragment) |
| Match: gi|25408936|pir||A84888 |
score: 24.25 |
e-value: 8.6e-07 |
Identity: 34.62% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|25408936|pir||A84888 hypothetical protein At2g45230 [imported] - Arabidopsis thaliana gi|2583130|gb|AAB82639.1| pu... |
| Match: gi|9758157|dbj|BAB08714.1| |
score: 24.25 |
e-value: 2.4e-07 |
Identity: 28.57% |
Span: 105bp (19.1%) |
Frame: 3 |
| gi|9758157|dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] |
| Match: gi|21740636|emb|CAD40197.1| |
score: 23.87 |
e-value: 1.3e-09 |
Identity: 52.94% |
Span: 51bp (9.3%) |
Frame: 1 |
| gi|21740636|emb|CAD40197.1| OSJNBb0043H09.5 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25408124|pir||C84716 |
score: 23.87 |
e-value: 1.2e-11 |
Identity: 38.46% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|25408124|pir||C84716 hypothetical protein At2g31080 [imported] - Arabidopsis thaliana gi|3746069|gb|AAC63844.1| pu... |
| Match: gi|25411313|pir||C84487 |
score: 23.48 |
e-value: 1.3e-09 |
Identity: 38.46% |
Span: 78bp (14.2%) |
Frame: 3 |
| gi|25411313|pir||C84487 hypothetical protein At2g07650 [imported] - Arabidopsis thaliana gi|5001454|gb|AAD37021.1| pu... |
| Match: gi|25411174|pir||H84469 |
score: 22.71 |
e-value: 1.8e-07 |
Identity: 52.17% |
Span: 69bp (12.5%) |
Frame: 3 |
| gi|25411174|pir||H84469 hypothetical protein At2g05550 [imported] - Arabidopsis thaliana gi|4581169|gb|AAD24652.1| pu... |
| Match: gi|29126371|gb|AAO66563.1| |
score: 21.94 |
e-value: 2.2e-11 |
Identity: 47.06% |
Span: 51bp (9.3%) |
Frame: 1 |
| gi|29126371|gb|AAO66563.1| putative reverse transcriptase [Oryza sativa (japonica cultivar-group)] |
| Match: gi|25411313|pir||C84487 |
score: 21.94 |
e-value: 1.3e-09 |
Identity: 45.83% |
Span: 72bp (13.1%) |
Frame: 1 |
| gi|25411313|pir||C84487 hypothetical protein At2g07650 [imported] - Arabidopsis thaliana gi|5001454|gb|AAD37021.1| pu... |
| Match: gi|22327414|ref|NP_680357.1| |
score: 21.94 |
e-value: 3.3e-12 |
Identity: 40% |
Span: 75bp (13.6%) |
Frame: 3 |
| gi|22327414|ref|NP_680357.1| RNase H domain-containing protein [Arabidopsis thaliana] |
|
| 116 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 76 hits recorded |
| Match: At5g36905.1 |
score: 70.86 |
e-value: 1.2e-13 |
Identity: 38.1% |
Span: 312bp (56.7%) |
Frame: 2 |
| At5g36905.1 68412.m03970 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thali... |
| Match: At4g20725.1 |
score: 67.78 |
e-value: 1.2e-12 |
Identity: 38.75% |
Span: 240bp (43.6%) |
Frame: 2 |
| At4g20725.1 68411.m02753 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g31080.1 |
score: 67.01 |
e-value: 4.4e-13 |
Identity: 35.48% |
Span: 270bp (49.1%) |
Frame: 2 |
| At2g31080.1 68409.m03434 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At4g15590.1 |
score: 64.31 |
e-value: 4e-11 |
Identity: 36.25% |
Span: 240bp (43.6%) |
Frame: 2 |
| At4g15590.1 68411.m02160 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At4g08830.1 |
score: 62.77 |
e-value: 1.2e-10 |
Identity: 42.5% |
Span: 240bp (43.6%) |
Frame: 2 |
| At4g08830.1 68411.m01309 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At3g32110.1 |
score: 62.39 |
e-value: 1.5e-10 |
Identity: 38.75% |
Span: 240bp (43.6%) |
Frame: 2 |
| At3g32110.1 68410.m03769 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At1g31030.1 |
score: 60.85 |
e-value: 4.5e-10 |
Identity: 32.41% |
Span: 321bp (58.4%) |
Frame: 2 |
| At1g31030.1 68408.m03439 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At5g35413.1 |
score: 58.15 |
e-value: 2.9e-09 |
Identity: 28.97% |
Span: 321bp (58.4%) |
Frame: 2 |
| At5g35413.1 68412.m03791 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At2g07650.1 |
score: 57.77 |
e-value: 4.6e-11 |
Identity: 34.52% |
Span: 252bp (45.8%) |
Frame: 2 |
| At2g07650.1 68409.m00790 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At1g25430.1 |
score: 57.38 |
e-value: 4.9e-09 |
Identity: 36.49% |
Span: 222bp (40.4%) |
Frame: 2 |
| At1g25430.1 68408.m02858 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At4g10830.1 |
score: 56.61 |
e-value: 8.4e-09 |
Identity: 31.4% |
Span: 258bp (46.9%) |
Frame: 2 |
| At4g10830.1 68411.m01596 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At1g51750.1 |
score: 55.84 |
e-value: 1.4e-08 |
Identity: 29.13% |
Span: 309bp (56.2%) |
Frame: 2 |
| At1g51750.1 68408.m05353 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g17910.1 |
score: 55.45 |
e-value: 6.3e-10 |
Identity: 28.04% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g17910.1 68409.m01869 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At5g13475.1 |
score: 54.3 |
e-value: 4.2e-08 |
Identity: 32.38% |
Span: 312bp (56.7%) |
Frame: 2 |
| At5g13475.1 68412.m01433 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At3g44035.1 |
score: 53.91 |
e-value: 1.8e-09 |
Identity: 29.52% |
Span: 315bp (57.3%) |
Frame: 2 |
| At3g44035.1 68410.m04368 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g05550.1 |
score: 53.91 |
e-value: 6.6e-09 |
Identity: 32.71% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g05550.1 68409.m00527 non-LTR retroelement reverse transcriptase -related |
| Match: At2g05200.1 |
score: 53.91 |
e-value: 5.4e-08 |
Identity: 29.91% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g05200.1 68409.m00490 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At3g44096.1 |
score: 51.99 |
e-value: 2.1e-07 |
Identity: 28.97% |
Span: 321bp (58.4%) |
Frame: 2 |
| At3g44096.1 68410.m04377 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At5g17725.1 |
score: 51.99 |
e-value: 1e-10 |
Identity: 34.15% |
Span: 246bp (44.7%) |
Frame: 2 |
| At5g17725.1 68412.m01913 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g23880.1 |
score: 51.99 |
e-value: 2.1e-07 |
Identity: 28.57% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g23880.1 68409.m02583 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At1g23990.1 |
score: 51.6 |
e-value: 2.7e-07 |
Identity: 28.97% |
Span: 321bp (58.4%) |
Frame: 2 |
| At1g23990.1 68408.m02736 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At4g11710.1 |
score: 51.22 |
e-value: 3.5e-07 |
Identity: 27.62% |
Span: 315bp (57.3%) |
Frame: 2 |
| At4g11710.1 68411.m01693 hypothetical protein various predicted reverse transcriptases/transposons, Arabidopsis thali... |
| Match: At1g47910.1 |
score: 50.83 |
e-value: 3e-09 |
Identity: 27.1% |
Span: 315bp (57.3%) |
Frame: 2 |
| At1g47910.1 68408.m04887 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At3g45550.1 |
score: 50.83 |
e-value: 4.6e-07 |
Identity: 31.4% |
Span: 258bp (46.9%) |
Frame: 2 |
| At3g45550.1 68410.m04556 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g11240.1 |
score: 50.83 |
e-value: 1.4e-08 |
Identity: 29.52% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g11240.1 68409.m01076 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g28980.1 |
score: 50.45 |
e-value: 6e-07 |
Identity: 30.68% |
Span: 264bp (48.0%) |
Frame: 2 |
| At2g28980.1 68409.m03191 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g45230.1 |
score: 50.06 |
e-value: 3.1e-08 |
Identity: 24.76% |
Span: 315bp (57.3%) |
Frame: 2 |
| At2g45230.1 68409.m05086 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At4g04000.1 |
score: 49.29 |
e-value: 2.4e-08 |
Identity: 26.74% |
Span: 258bp (46.9%) |
Frame: 2 |
| At4g04000.1 68411.m00505 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At1g30390.1 |
score: 49.29 |
e-value: 1.3e-06 |
Identity: 27.62% |
Span: 315bp (57.3%) |
Frame: 2 |
| At1g30390.1 68408.m03365 hypothetical protein similar to portions of LINE-element reverse transcriptases, possible ps... |
| Match: At3g44650.1 |
score: 48.91 |
e-value: 1.8e-06 |
Identity: 29.25% |
Span: 315bp (57.3%) |
Frame: 2 |
| At3g44650.1 68410.m04445 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At4g29090.1 |
score: 48.91 |
e-value: 1.8e-06 |
Identity: 29.76% |
Span: 252bp (45.8%) |
Frame: 2 |
| At4g29090.1 68411.m03793 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At5g52065.1 |
score: 48.14 |
e-value: 3e-06 |
Identity: 29.59% |
Span: 294bp (53.5%) |
Frame: 2 |
| At5g52065.1 68412.m05839 non-LTR retroelement reverse transcriptase -related temporary automated functional assignment |
| Match: At2g05980.1 |
score: 48.14 |
e-value: 3e-06 |
Identity: 28.7% |
Span: 321bp (58.4%) |
Frame: 2 |
| At2g05980.1 68409.m00580 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At3g26614.1 |
score: 47.75 |
e-value: 3.9e-06 |
Identity: 27.06% |
Span: 255bp (46.4%) |
Frame: 2 |
| At3g26614.1 68410.m03044 endonuclease/exonuclease/phosphatase family low similarity to reverse transcriptase GI:97627... |
| Match: At4g02490.1 |
score: 47.75 |
e-value: 3.9e-06 |
Identity: 34.21% |
Span: 228bp (41.5%) |
Frame: 2 |
| At4g02490.1 68411.m00309 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At4g12180.1 |
score: 47.37 |
e-value: 5.1e-06 |
Identity: 31.08% |
Span: 222bp (40.4%) |
Frame: 2 |
| At4g12180.1 68411.m01748 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g14430.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 24.37% |
Span: 357bp (64.9%) |
Frame: 2 |
| At2g14430.1 68409.m01461 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At3g62725.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 28.07% |
Span: 315bp (57.3%) |
Frame: 2 |
| At3g62725.1 68410.m06511 non-LTR retroelement reverse transcriptase -related temporary automated functional assignment |
| Match: At3g24255.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 28.07% |
Span: 315bp (57.3%) |
Frame: 2 |
| At3g24255.1 68410.m02779 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GB:AAC63... |
| Match: At1g47860.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 24.37% |
Span: 357bp (64.9%) |
Frame: 2 |
| At1g47860.1 68408.m04878 reverse transcriptase-related low similarity to reverse transcriptase [Arabidopsis thaliana]... |
| Match: At2g31520.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 29.76% |
Span: 252bp (45.8%) |
Frame: 2 |
| At2g31520.1 68409.m03491 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g25550.1 |
score: 46.98 |
e-value: 6.7e-06 |
Identity: 29.76% |
Span: 252bp (45.8%) |
Frame: 2 |
| At2g25550.1 68409.m02772 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g18820.1 |
score: 45.82 |
e-value: 6.8e-07 |
Identity: 33.33% |
Span: 234bp (42.5%) |
Frame: 2 |
| At2g18820.1 68409.m01982 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At4g14470.1 |
score: 45.44 |
e-value: 1.9e-05 |
Identity: 29.87% |
Span: 219bp (39.8%) |
Frame: 2 |
| At4g14470.1 68411.m02021 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g17610.1 |
score: 45.05 |
e-value: 1.1e-08 |
Identity: 31.71% |
Span: 246bp (44.7%) |
Frame: 2 |
| At2g17610.1 68409.m01834 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g01550.1 |
score: 44.28 |
e-value: 4.3e-05 |
Identity: 32.05% |
Span: 234bp (42.5%) |
Frame: 2 |
| At2g01550.1 68409.m00065 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g15540.1 |
score: 43.9 |
e-value: 5.6e-05 |
Identity: 28.95% |
Span: 228bp (41.5%) |
Frame: 2 |
| At2g15540.1 68409.m01594 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At1g43570.1 |
score: 43.13 |
e-value: 9.6e-05 |
Identity: 25.22% |
Span: 345bp (62.7%) |
Frame: 2 |
| At1g43570.1 68408.m04581 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GI:40068... |
| Match: At5g13655.1 |
score: 43.13 |
e-value: 9.6e-05 |
Identity: 35.09% |
Span: 171bp (31.1%) |
Frame: 2 |
| At5g13655.1 68412.m01464 non-LTR retroelement reverse transcriptase -related temporary automated functional assignment |
| Match: At1g19030.1 |
score: 42.74 |
e-value: 0.00013 |
Identity: 28.38% |
Span: 222bp (40.4%) |
Frame: 2 |
| At1g19030.1 68408.m02137 hypothetical protein similar to putative non-LTR retroelement reverse transcriptase GI:40068... |
| Match: At5g35720.1 |
score: 42.36 |
e-value: 0.00016 |
Identity: 30.26% |
Span: 228bp (41.5%) |
Frame: 2 |
| At5g35720.1 68412.m03843 reverse transcriptase -related temporary automated functional assignment |
| Match: At1g24640.1 |
score: 41.2 |
e-value: 0.00037 |
Identity: 22.86% |
Span: 315bp (57.3%) |
Frame: 2 |
| At1g24640.1 68408.m02802 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At5g13485.1 |
score: 40.82 |
e-value: 0.00048 |
Identity: 28.72% |
Span: 267bp (48.5%) |
Frame: 2 |
| At5g13485.1 68412.m01435 non-LTR retroelement reverse transcriptase -related temporary automated functional assignment |
| Match: At4g03720.1 |
score: 40.43 |
e-value: 0.00062 |
Identity: 39.53% |
Span: 129bp (23.5%) |
Frame: 2 |
| At4g03720.1 68411.m00465 hypothetical protein |
| Match: At1g31100.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 32.43% |
Span: 222bp (40.4%) |
Frame: 2 |
| At1g31100.1 68408.m03447 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g16680.1 |
score: 39.28 |
e-value: 3.2e-05 |
Identity: 26.83% |
Span: 246bp (44.7%) |
Frame: 2 |
| At2g16680.1 68409.m01724 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At2g15510.1 |
score: 38.12 |
e-value: 0.003 |
Identity: 29.23% |
Span: 195bp (35.5%) |
Frame: 2 |
| At2g15510.1 68409.m01590 non-LTR retroelement reverse transcriptase -related |
| Match: At2g41580.1 |
score: 35.81 |
e-value: 0.002 |
Identity: 25.51% |
Span: 288bp (52.4%) |
Frame: 2 |
| At2g41580.1 68409.m04649 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: AtMg00310 |
score: 34.65 |
e-value: 0.034 |
Identity: 25% |
Span: 291bp (52.9%) |
Frame: 2 |
| AtMg00310 orf154 \N |
| Match: At2g17610.1 |
score: 30.8 |
e-value: 1.1e-08 |
Identity: 28.57% |
Span: 210bp (38.2%) |
Frame: 3 |
| At2g17610.1 68409.m01834 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At5g17725.1 |
score: 30.8 |
e-value: 1e-10 |
Identity: 29.17% |
Span: 216bp (39.3%) |
Frame: 3 |
| At5g17725.1 68412.m01913 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At1g47910.1 |
score: 26.95 |
e-value: 3e-09 |
Identity: 27.78% |
Span: 216bp (39.3%) |
Frame: 3 |
| At1g47910.1 68408.m04887 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At4g04000.1 |
score: 25.41 |
e-value: 2.4e-08 |
Identity: 28.12% |
Span: 96bp (17.5%) |
Frame: 3 |
| At4g04000.1 68411.m00505 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g16680.1 |
score: 24.64 |
e-value: 3.2e-05 |
Identity: 25% |
Span: 216bp (39.3%) |
Frame: 3 |
| At2g16680.1 68409.m01724 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At2g17910.1 |
score: 24.64 |
e-value: 6.3e-10 |
Identity: 26.39% |
Span: 216bp (39.3%) |
Frame: 3 |
| At2g17910.1 68409.m01869 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At3g44035.1 |
score: 24.64 |
e-value: 1.8e-09 |
Identity: 31.25% |
Span: 96bp (17.5%) |
Frame: 3 |
| At3g44035.1 68410.m04368 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g11240.1 |
score: 24.64 |
e-value: 1.4e-08 |
Identity: 30.23% |
Span: 129bp (23.5%) |
Frame: 3 |
| At2g11240.1 68409.m01076 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g45230.1 |
score: 24.25 |
e-value: 3.1e-08 |
Identity: 34.62% |
Span: 78bp (14.2%) |
Frame: 3 |
| At2g45230.1 68409.m05086 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At2g18820.1 |
score: 23.87 |
e-value: 6.8e-07 |
Identity: 26.23% |
Span: 183bp (33.3%) |
Frame: 3 |
| At2g18820.1 68409.m01982 reverse transcriptase (RNA-dependent DNA polymerase) family protein low similarity to revers... |
| Match: At2g31080.1 |
score: 23.87 |
e-value: 4.4e-13 |
Identity: 38.46% |
Span: 78bp (14.2%) |
Frame: 3 |
| At2g31080.1 68409.m03434 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g07650.1 |
score: 23.48 |
e-value: 4.6e-11 |
Identity: 38.46% |
Span: 78bp (14.2%) |
Frame: 3 |
| At2g07650.1 68409.m00790 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At2g05550.1 |
score: 22.71 |
e-value: 6.6e-09 |
Identity: 52.17% |
Span: 69bp (12.5%) |
Frame: 3 |
| At2g05550.1 68409.m00527 non-LTR retroelement reverse transcriptase -related |
| Match: At5g36905.1 |
score: 21.94 |
e-value: 1.2e-13 |
Identity: 40% |
Span: 75bp (13.6%) |
Frame: 3 |
| At5g36905.1 68412.m03970 RNase H domain-containing protein low similarity to reverse transcriptase [Arabidopsis thali... |
| Match: At2g07650.1 |
score: 21.94 |
e-value: 4.6e-11 |
Identity: 45.83% |
Span: 72bp (13.1%) |
Frame: 1 |
| At2g07650.1 68409.m00790 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
| Match: At4g20725.1 |
score: 21.56 |
e-value: 1.2e-12 |
Identity: 27.14% |
Span: 210bp (38.2%) |
Frame: 3 |
| At4g20725.1 68411.m02753 reverse transcriptase (RNA-dependent DNA polymerase) family protein similar to reverse trans... |
| Match: At2g41580.1 |
score: 21.56 |
e-value: 0.002 |
Identity: 20.83% |
Span: 216bp (39.3%) |
Frame: 3 |
| At2g41580.1 68409.m04649 reverse transcriptase (RNA-dependent DNA polymerase), putative similar to reverse transcript... |
|
