| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|270252309|emb|CBI18920.1| |
score: 176 |
e-value: 1e-42 |
Identity: 77.14% |
Span: 315bp (58.3%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|147771519|emb|CAN66750.1| |
score: 176 |
e-value: 1e-42 |
Identity: 77.14% |
Span: 315bp (58.3%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|224065743|ref|XP_002301949.1| |
score: 159 |
e-value: 1e-37 |
Identity: 70.75% |
Span: 318bp (58.9%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222843675|gb|EEE81222.1| predicted protein [Populus trichocarpa] |
| Match: gi|242097088|ref|XP_002439034.1| |
score: 152 |
e-value: 2e-35 |
Identity: 65.05% |
Span: 309bp (57.2%) |
Frame: 2 |
| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] >gi241917257|gb|EER90401.1| hypothetical protein SORBIDRA... |
| Match: gi|218198893|gb|EEC81320.1| |
score: 149 |
e-value: 1e-34 |
Identity: 66.34% |
Span: 303bp (56.1%) |
Frame: 2 |
| hypothetical protein OsI_24484 [Oryza sativa Indica Group] |
| Match: gi|115469990|ref|NP_001058594.1| |
score: 149 |
e-value: 1e-34 |
Identity: 66.34% |
Span: 303bp (56.1%) |
Frame: 2 |
| Os06g0717400 [Oryza sativa (japonica cultivar-group)] >gi75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA pseudourin... |
| Match: gi|195644818|gb|ACG41877.1| |
score: 147 |
e-value: 5e-34 |
Identity: 63.11% |
Span: 309bp (57.2%) |
Frame: 2 |
| RNA binding protein [Zea mays] |
| Match: gi|42572121|ref|NP_974151.1| |
score: 138 |
e-value: 2e-31 |
Identity: 64.65% |
Span: 297bp (55.0%) |
Frame: 2 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA ps... |
| Match: gi|6721111|gb|AAF26765.1|AC007396_14 |
score: 138 |
e-value: 2e-31 |
Identity: 64.65% |
Span: 297bp (55.0%) |
Frame: 2 |
| T4O12.25 [Arabidopsis thaliana] |
| Match: gi|226491450|ref|NP_001140404.1| |
score: 119 |
e-value: 2e-25 |
Identity: 73.24% |
Span: 213bp (39.4%) |
Frame: 2 |
| hypothetical protein LOC100272459 [Zea mays] >gi194699356|gb|ACF83762.1| unknown [Zea mays] |
| Match: gi|255556673|ref|XP_002519370.1| |
score: 118 |
e-value: 3e-25 |
Identity: 74.65% |
Span: 213bp (39.4%) |
Frame: 2 |
| ribosomal pseudouridine synthase, putative [Ricinus communis] >gi223541437|gb|EEF42987.1| ribosomal pseudouridine syn... |
| Match: gi|226455748|gb|EEH53051.1| |
score: 105 |
e-value: 2e-21 |
Identity: 54.55% |
Span: 297bp (55.0%) |
Frame: 2 |
| predicted protein [Micromonas pusilla CCMP1545] |
| Match: gi|116058513|emb|CAL53702.1| |
score: 105 |
e-value: 3e-21 |
Identity: 56.57% |
Span: 294bp (54.4%) |
Frame: 2 |
| ribosomal large subunit pseudouridine syn (ISS) [Ostreococcus tauri] |
| Match: gi|255070545|ref|XP_002507354.1| |
score: 100 |
e-value: 9e-20 |
Identity: 50% |
Span: 294bp (54.4%) |
Frame: 2 |
| predicted protein [Micromonas sp. RCC299] >gi226522629|gb|ACO68612.1| predicted protein [Micromonas sp. RCC299] |
| Match: gi|145343527|ref|XP_001416372.1| |
score: 99.8 |
e-value: 1e-19 |
Identity: 56.52% |
Span: 273bp (50.6%) |
Frame: 2 |
| predicted protein [Ostreococcus lucimarinus CCE9901] >gi144576597|gb|ABO94665.1| predicted protein [Ostreococcus luci... |
| Match: gi|159487279|ref|XP_001701661.1| |
score: 95.9 |
e-value: 2e-18 |
Identity: 47.47% |
Span: 297bp (55.0%) |
Frame: 2 |
| RNA pseudouridine synthase [Chlamydomonas reinhardtii] >gi158280880|gb|EDP06636.1| RNA pseudouridine synthase [Chlamy... |
| Match: gi|255060793|ref|ZP_05312912.1| |
score: 87.4 |
e-value: 6e-16 |
Identity: 47.12% |
Span: 312bp (57.8%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Geobacter sp. M18] >gi254983367|gb|EET34376.1| pseudouridine synthase, RluA fami... |
| Match: gi|84701969|ref|ZP_01016544.1| |
score: 87 |
e-value: 8e-16 |
Identity: 45.54% |
Span: 303bp (56.1%) |
Frame: 2 |
| putative ribosomal large subunit pseudouridine synthase protein [Parvularcula bermudensis HTCC2503] >gi84691215|gb|EA... |
| Match: gi|288925171|ref|ZP_06419106.1| |
score: 84.3 |
e-value: 5e-15 |
Identity: 45% |
Span: 300bp (55.6%) |
Frame: 2 |
| ribosomal large subunit pseudouridine synthase D [Prevotella buccae D17] >gi288337936|gb|EFC76287.1| ribosomal large ... |
| Match: gi|253702050|ref|YP_003023239.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 46.08% |
Span: 306bp (56.7%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Geobacter sp. M21] >gi251776900|gb|ACT19481.1| pseudouridine synthase, RluA fami... |
| Match: gi|197119760|ref|YP_002140187.1| |
score: 83.2 |
e-value: 1e-14 |
Identity: 46.08% |
Span: 306bp (56.7%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Geobacter bemidjiensis Bem] >gi197089120|gb|ACH40391.1| pseudouridine synthase, ... |
| Match: gi|56419681|ref|YP_146999.1| |
score: 82.8 |
e-value: 2e-14 |
Identity: 46.46% |
Span: 297bp (55.0%) |
Frame: 2 |
| hypothetical protein GK1146 [Geobacillus kaustophilus HTA426] >gi229498191|ref|ZP_04391888.1| pseudouridine synthase,... |
| Match: gi|39995193|ref|NP_951144.1| |
score: 82.4 |
e-value: 2e-14 |
Identity: 48.42% |
Span: 285bp (52.8%) |
Frame: 2 |
| ribosomal large subunit pseudouridine synthase D [Geobacter sulfurreducens PCA] >gi39981955|gb|AAR33417.1| ribosomal ... |
| Match: gi|260593408|ref|ZP_05858866.1| |
score: 82 |
e-value: 3e-14 |
Identity: 43.43% |
Span: 297bp (55.0%) |
Frame: 2 |
| ribosomal large subunit pseudouridine synthase D [Prevotella veroralis F0319] >gi260534684|gb|EEX17301.1| ribosomal l... |
| Match: gi|254294738|ref|YP_003060761.1| |
score: 82 |
e-value: 3e-14 |
Identity: 42.16% |
Span: 306bp (56.7%) |
Frame: 2 |
| pseudouridine synthase, RluA family [Hirschia baltica ATCC 49814] >gi254043269|gb|ACT60064.1| pseudouridine synthase,... |
|
| 225 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 1 hits recorded |
| Match: At1G76050.2 |
score: 138 |
e-value: 2e-33 |
Identity: 64.65% |
Span: 297bp (55.0%) |
Frame: 2 |
| pseudouridine synthase family protein | chr1:28545752-28547720 FORWARD |
|
| swissprot [blastx] | Showing best 14 hits recorded |
| Match: Q5Z8P2 |
score: 149 |
e-value: 1e-35 |
Identity: 66.34% |
Span: 303bp (56.1%) |
Frame: 2 |
| RNA pseudourine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1 |
| Match: Q3ECD0 |
score: 138 |
e-value: 2e-32 |
Identity: 64.65% |
Span: 297bp (55.0%) |
Frame: 2 |
| RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1 |
| Match: Q9KU20 |
score: 77 |
e-value: 6e-14 |
Identity: 42.71% |
Span: 288bp (53.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio cholerae GN=rluD PE=3 SV=1 |
| Match: Q8DEV0 |
score: 76.3 |
e-value: 1e-13 |
Identity: 40.4% |
Span: 297bp (55.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio vulnificus GN=rluD PE=3 SV=1 |
| Match: Q87S65 |
score: 75.5 |
e-value: 2e-13 |
Identity: 40.4% |
Span: 297bp (55.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Vibrio parahaemolyticus GN=rluD PE=3 SV=1 |
| Match: Q9CKA6 |
score: 74.7 |
e-value: 3e-13 |
Identity: 40.21% |
Span: 291bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Pasteurella multocida GN=rluD PE=3 SV=1 |
| Match: P44445 |
score: 73.6 |
e-value: 7e-13 |
Identity: 39.18% |
Span: 291bp (53.9%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus influenzae GN=rluD PE=3 SV=1 |
| Match: Q45480 |
score: 72 |
e-value: 2e-12 |
Identity: 43.43% |
Span: 297bp (55.0%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase ylyB OS=Bacillus subtilis GN=ylyB PE=3 SV=3 |
| Match: P33640 |
score: 71.2 |
e-value: 3e-12 |
Identity: 41.67% |
Span: 288bp (53.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Pseudomonas aeruginosa GN=rluD PE=3 SV=2 |
| Match: O50310 |
score: 70.5 |
e-value: 6e-12 |
Identity: 43.43% |
Span: 297bp (55.0%) |
Frame: 2 |
| Uncharacterized RNA pseudouridine synthase Cpar_0723 OS=Chlorobaculum parvum (strain NCIB 8327) GN=Cpar_0723 PE=3 SV=1 |
| Match: Q8PHN2 |
score: 68.6 |
e-value: 2e-11 |
Identity: 40.4% |
Span: 297bp (55.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas axonopodis pv. citri GN=rluD PE=3 SV=1 |
| Match: Q8P682 |
score: 68.2 |
e-value: 3e-11 |
Identity: 42.16% |
Span: 297bp (55.0%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris GN=rluD PE=3 SV=1 |
| Match: Q8ZBV7 |
score: 67.4 |
e-value: 5e-11 |
Identity: 35.64% |
Span: 303bp (56.1%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Yersinia pestis GN=rluD PE=3 SV=1 |
| Match: Q9L7A7 |
score: 66.6 |
e-value: 9e-11 |
Identity: 37.5% |
Span: 288bp (53.3%) |
Frame: 2 |
| Ribosomal large subunit pseudouridine synthase D OS=Haemophilus ducreyi GN=rluD PE=3 SV=2 |
|
