| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255628071|gb|ACU14380.1| |
score: 151 |
e-value: 3e-35 |
Identity: 90.91% |
Span: 231bp (44.2%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|255626597|gb|ACU13643.1| |
score: 151 |
e-value: 3e-35 |
Identity: 90.91% |
Span: 231bp (44.2%) |
Frame: 3 |
| unknown [Glycine max] |
| Match: gi|225468340|ref|XP_002272246.1| |
score: 149 |
e-value: 1e-34 |
Identity: 89.61% |
Span: 231bp (44.2%) |
Frame: 3 |
| PREDICTED: similar to Os11g0657300 [Vitis vinifera] >gi270234749|emb|CBI23345.1| unnamed protein product [Vitis vinif... |
| Match: gi|115486505|ref|NP_001068396.1| |
score: 149 |
e-value: 2e-34 |
Identity: 89.61% |
Span: 231bp (44.2%) |
Frame: 3 |
| Os11g0657300 [Oryza sativa (japonica cultivar-group)] >gi77552372|gb|ABA95169.1| small nuclear ribonucleoprotein F, p... |
| Match: gi|115444577|ref|NP_001046068.1| |
score: 149 |
e-value: 2e-34 |
Identity: 89.61% |
Span: 231bp (44.2%) |
Frame: 3 |
| Os02g0177500 [Oryza sativa (japonica cultivar-group)] >gi50252055|dbj|BAD27986.1| putative small nuclear ribonucleopr... |
| Match: gi|116782528|gb|ABK22541.1| |
score: 148 |
e-value: 3e-34 |
Identity: 88.31% |
Span: 231bp (44.2%) |
Frame: 3 |
| unknown [Picea sitchensis] |
| Match: gi|226531376|ref|NP_001150516.1| |
score: 146 |
e-value: 8e-34 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| small nuclear ribonucleoprotein F [Zea mays] >gi194696080|gb|ACF82124.1| unknown [Zea mays] >gi|195609436|gb|ACG26548... |
| Match: gi|195639214|gb|ACG39075.1| |
score: 146 |
e-value: 1e-33 |
Identity: 85.71% |
Span: 231bp (44.2%) |
Frame: 3 |
| small nuclear ribonucleoprotein F [Zea mays] |
| Match: gi|15234669|ref|NP_194751.1| |
score: 146 |
e-value: 1e-33 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F) [Arabidopsis thaliana] >gi10720264|sp|Q9SUM2.1|RUXF_ARATH RecName: Full=Prob... |
| Match: gi|224143719|ref|XP_002325051.1| |
score: 145 |
e-value: 2e-33 |
Identity: 88.31% |
Span: 231bp (44.2%) |
Frame: 3 |
| predicted protein [Populus trichocarpa] >gi222866485|gb|EEF03616.1| predicted protein [Populus trichocarpa] |
| Match: gi|218190178|gb|EEC72605.1| |
score: 145 |
e-value: 2e-33 |
Identity: 89.33% |
Span: 225bp (43.0%) |
Frame: 3 |
| hypothetical protein OsI_06076 [Oryza sativa Indica Group] >gi222622299|gb|EEE56431.1| hypothetical protein OsJ_05599... |
| Match: gi|77552373|gb|ABA95170.1| |
score: 145 |
e-value: 2e-33 |
Identity: 89.33% |
Span: 225bp (43.0%) |
Frame: 3 |
| small nuclear ribonucleoprotein F, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|242056189|ref|XP_002457240.1| |
score: 144 |
e-value: 4e-33 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_03g003900 [Sorghum bicolor] >gi241929215|gb|EES02360.1| hypothetical protein SORBIDRA... |
| Match: gi|226531954|ref|NP_001151866.1| |
score: 144 |
e-value: 5e-33 |
Identity: 79.27% |
Span: 246bp (47.0%) |
Frame: 3 |
| small nuclear ribonucleoprotein F [Zea mays] >gi195650409|gb|ACG44672.1| small nuclear ribonucleoprotein F [Zea mays] |
| Match: gi|255579817|ref|XP_002530746.1| |
score: 143 |
e-value: 7e-33 |
Identity: 85.71% |
Span: 231bp (44.2%) |
Frame: 3 |
| small nuclear ribonucleoprotein f, putative [Ricinus communis] >gi223529710|gb|EEF31652.1| small nuclear ribonucleopr... |
| Match: gi|242064206|ref|XP_002453392.1| |
score: 143 |
e-value: 9e-33 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| hypothetical protein SORBIDRAFT_04g005200 [Sorghum bicolor] >gi241933223|gb|EES06368.1| hypothetical protein SORBIDRA... |
| Match: gi|168017152|ref|XP_001761112.1| |
score: 140 |
e-value: 4e-32 |
Identity: 80.52% |
Span: 231bp (44.2%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162687798|gb|EDQ74179.1| predicted protein [Physcomitrella... |
| Match: gi|241735825|ref|XP_002413964.1| |
score: 139 |
e-value: 1e-31 |
Identity: 81.58% |
Span: 228bp (43.6%) |
Frame: 3 |
| membrane-associated protein, putative [Ixodes scapularis] >gi215507818|gb|EEC17272.1| membrane-associated protein, pu... |
| Match: gi|241610412|ref|XP_002406902.1| |
score: 139 |
e-value: 1e-31 |
Identity: 81.58% |
Span: 228bp (43.6%) |
Frame: 3 |
| membrane-associated protein, putative [Ixodes scapularis] >gi215502736|gb|EEC12230.1| membrane-associated protein, pu... |
| Match: gi|242007618|ref|XP_002424631.1| |
score: 139 |
e-value: 1e-31 |
Identity: 82.89% |
Span: 228bp (43.6%) |
Frame: 3 |
| membrane-associated protein, putative [Pediculus humanus corporis] >gi212508097|gb|EEB11893.1| membrane-associated pr... |
| Match: gi|260800049|ref|XP_002594949.1| |
score: 139 |
e-value: 2e-31 |
Identity: 82.89% |
Span: 228bp (43.6%) |
Frame: 3 |
| hypothetical protein BRAFLDRAFT_271061 [Branchiostoma floridae] >gi229280187|gb|EEN50960.1| hypothetical protein BRAF... |
| Match: gi|291244974|ref|XP_002742366.1| |
score: 137 |
e-value: 4e-31 |
Identity: 82.67% |
Span: 225bp (43.0%) |
Frame: 3 |
| PREDICTED: Snrpf protein-like [Saccoglossus kowalevskii] |
| Match: gi|168049785|ref|XP_001777342.1| |
score: 137 |
e-value: 4e-31 |
Identity: 81.33% |
Span: 225bp (43.0%) |
Frame: 3 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162671318|gb|EDQ57872.1| predicted protein [Physcomitrella... |
| Match: gi|221120213|ref|XP_002166685.1| |
score: 137 |
e-value: 6e-31 |
Identity: 81.58% |
Span: 228bp (43.6%) |
Frame: 3 |
| PREDICTED: similar to small nuclear ribonucleoprotein polypeptide F [Hydra magnipapillata] |
| Match: gi|196008042|ref|XP_002113887.1| |
score: 136 |
e-value: 8e-31 |
Identity: 81.08% |
Span: 222bp (42.4%) |
Frame: 3 |
| hypothetical protein TRIADDRAFT_26794 [Trichoplax adhaerens] >gi190584291|gb|EDV24361.1| hypothetical protein TRIADDR... |
|
| 181 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At4G30220.1 |
score: 146 |
e-value: 8e-36 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| Symbols: RUXF | small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative | chr4:1480... |
| Match: At2G14285.1 |
score: 96.3 |
e-value: 9e-21 |
Identity: 88% |
Span: 150bp (28.7%) |
Frame: 3 |
| Identical to Probable small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) [Arabidopsis Thaliana]... |
| Match: At3G59810.1 |
score: 71.2 |
e-value: 3e-13 |
Identity: 46.38% |
Span: 207bp (39.6%) |
Frame: 3 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At2G43810.2 |
score: 71.2 |
e-value: 3e-13 |
Identity: 45.45% |
Span: 198bp (37.9%) |
Frame: 3 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At2G43810.1 |
score: 71.2 |
e-value: 3e-13 |
Identity: 45.45% |
Span: 198bp (37.9%) |
Frame: 3 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
|
| swissprot [blastx] | Showing best 22 hits recorded |
| Match: Q9SUM2 |
score: 146 |
e-value: 8e-35 |
Identity: 87.01% |
Span: 231bp (44.2%) |
Frame: 3 |
| Probable small nuclear ribonucleoprotein F OS=Arabidopsis thaliana GN=At4g30220 PE=2 SV=1 |
| Match: P62321 |
score: 132 |
e-value: 9e-31 |
Identity: 79.73% |
Span: 222bp (42.4%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Xenopus laevis GN=snrpf PE=3 SV=1 |
| Match: P62307 |
score: 132 |
e-value: 9e-31 |
Identity: 79.73% |
Span: 222bp (42.4%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Mus musculus GN=Snrpf PE=2 SV=1 |
| Match: P62306 |
score: 132 |
e-value: 9e-31 |
Identity: 79.73% |
Span: 222bp (42.4%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Homo sapiens GN=SNRPF PE=1 SV=1 |
| Match: Q24297 |
score: 132 |
e-value: 9e-31 |
Identity: 80% |
Span: 225bp (43.0%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Drosophila melanogaster GN=DebB PE=1 SV=2 |
| Match: Q3T0Z8 |
score: 132 |
e-value: 9e-31 |
Identity: 79.73% |
Span: 222bp (42.4%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Bos taurus GN=SNRPF PE=3 SV=2 |
| Match: P34659 |
score: 123 |
e-value: 5e-28 |
Identity: 78.67% |
Span: 225bp (43.0%) |
Frame: 3 |
| Probable small nuclear ribonucleoprotein F OS=Caenorhabditis elegans GN=snr-5 PE=1 SV=1 |
| Match: O59734 |
score: 114 |
e-value: 4e-25 |
Identity: 72.6% |
Span: 219bp (41.9%) |
Frame: 3 |
| Probable small nuclear ribonucleoprotein F OS=Schizosaccharomyces pombe GN=smf1 PE=2 SV=1 |
| Match: Q54XP2 |
score: 97.8 |
e-value: 3e-20 |
Identity: 65.71% |
Span: 207bp (39.6%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Dictyostelium discoideum GN=snrpf PE=3 SV=1 |
| Match: Q9P5Z8 |
score: 95.5 |
e-value: 2e-19 |
Identity: 60% |
Span: 222bp (42.4%) |
Frame: 3 |
| Probable small nuclear ribonucleoprotein F OS=Neurospora crassa GN=B2O8.190 PE=3 SV=1 |
| Match: P54999 |
score: 90.9 |
e-value: 4e-18 |
Identity: 60.76% |
Span: 234bp (44.7%) |
Frame: 3 |
| Small nuclear ribonucleoprotein F OS=Saccharomyces cerevisiae GN=SMX3 PE=1 SV=1 |
| Match: A6R363 |
score: 73.2 |
e-value: 9e-13 |
Identity: 50.75% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=LSM6 PE=3 SV=1 |
| Match: P62313 |
score: 72 |
e-value: 2e-12 |
Identity: 48.48% |
Span: 198bp (37.9%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus GN=Lsm6 PE=2 SV=1 |
| Match: P62312 |
score: 72 |
e-value: 2e-12 |
Identity: 48.48% |
Span: 198bp (37.9%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens GN=LSM6 PE=1 SV=1 |
| Match: Q9UUI1 |
score: 69.7 |
e-value: 9e-12 |
Identity: 46.27% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Schizosaccharomyces pombe GN=lsm6 PE=2 SV=1 |
| Match: Q4WNI0 |
score: 69.7 |
e-value: 9e-12 |
Identity: 49.25% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus fumigatus GN=lsm6 PE=3 SV=2 |
| Match: A1DM27 |
score: 68.6 |
e-value: 2e-11 |
Identity: 47.76% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181... |
| Match: A5DRQ6 |
score: 67.8 |
e-value: 4e-11 |
Identity: 45.59% |
Span: 204bp (39.0%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Lodderomyces elongisporus GN=LSM6 PE=3 SV=2 |
| Match: Q1DRN0 |
score: 67.8 |
e-value: 4e-11 |
Identity: 44.78% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Coccidioides immitis GN=LSM6 PE=3 SV=1 |
| Match: A1CE19 |
score: 67.8 |
e-value: 4e-11 |
Identity: 47.76% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus clavatus GN=lsm6 PE=3 SV=2 |
| Match: Q2HAN0 |
score: 67.4 |
e-value: 5e-11 |
Identity: 47.76% |
Span: 201bp (38.4%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Chaetomium globosum GN=LSM6 PE=3 SV=2 |
| Match: B0DWN3 |
score: 66.6 |
e-value: 8e-11 |
Identity: 41.46% |
Span: 246bp (47.0%) |
Frame: 3 |
| U6 snRNA-associated Sm-like protein LSm6 OS=Laccaria bicolor (strain S238N-H82) GN=LSM6 PE=3 SV=1 |
|
