| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|21536939|gb|AAM61280.1| |
score: 142.5 |
e-value: 2.6e-33 |
Identity: 50.27% |
Span: 513bp (99.2%) |
Frame: 3 |
| RNA binding protein-like [Arabidopsis thaliana] |
| Match: gi|15232579|ref|NP_191037.1| |
score: 141 |
e-value: 7.5e-33 |
Identity: 49.73% |
Span: 513bp (99.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi7258381|emb|CAB77597.1| RNA binding protein-... |
| Match: gi|27476063|gb|AAO16994.1| |
score: 115.5 |
e-value: 3.4e-25 |
Identity: 42.06% |
Span: 513bp (99.2%) |
Frame: 3 |
| Hypothetical protein [Oryza sativa Japonica Group] >gi125585859|gb|EAZ26523.1| hypothetical protein OsJ_10418 [Oryza ... |
| Match: gi|25518498|pir||D86341 |
score: 90.12 |
e-value: 1.5e-17 |
Identity: 77.78% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|25518498|pir||D86341 hypothetical protein F9H16.14 - Arabidopsis thaliana gi|4836901|gb|AAD30604.1| Unknown protei... |
| Match: gi|15010636|gb|AAK73977.1| |
score: 90.12 |
e-value: 1.5e-17 |
Identity: 77.78% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|23505939|gb|AAN28829.1| |
score: 90.12 |
e-value: 1.5e-17 |
Identity: 77.78% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g20880/F9H16_14 [Arabidopsis thaliana] |
| Match: gi|18394923|ref|NP_564127.1| |
score: 90.12 |
e-value: 1.5e-17 |
Identity: 77.78% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|22330665|ref|NP_565132.2| |
score: 88.97 |
e-value: 3.4e-17 |
Identity: 75.93% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] |
| Match: gi|25518372|pir||B86363 |
score: 88.97 |
e-value: 3.4e-17 |
Identity: 74.07% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|25518372|pir||B86363 hypothetical protein F19G10.13 - Arabidopsis thaliana gi|2462825|gb|AAB72160.1| contains Proc... |
| Match: gi|18395177|ref|NP_564184.1| |
score: 88.97 |
e-value: 3.4e-17 |
Identity: 74.07% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi13605871|gb|AAK32921.1|AF367334_1 At1g22910/... |
| Match: gi|25406448|pir||D96792 |
score: 88.97 |
e-value: 3.4e-17 |
Identity: 75.93% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|25406448|pir||D96792 probable RNA-binding protein, 24808-23340 [imported] - Arabidopsis thaliana gi|6554473|gb|AAF... |
| Match: gi|15226439|ref|NP_182201.1| |
score: 84.73 |
e-value: 6.3e-16 |
Identity: 69.09% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|15226439|ref|NP_182201.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|7485761|pir||T0... |
| Match: gi|14532532|gb|AAK63994.1| |
score: 84.73 |
e-value: 6.3e-16 |
Identity: 37.5% |
Span: 513bp (99.2%) |
Frame: 3 |
| gi|14532532|gb|AAK63994.1| At1g33470/F10C21_14 [Arabidopsis thaliana] gi|18655391|gb|AAL76151.1| At1g33470/F10C21_14 ... |
| Match: gi|15217552|ref|NP_174613.1| |
score: 83.96 |
e-value: 1.1e-15 |
Identity: 70.37% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|15217552|ref|NP_174613.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|25403191|pir||E... |
| Match: gi|34907334|ref|NP_915014.1| |
score: 83.96 |
e-value: 1.1e-15 |
Identity: 70.37% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|34907334|ref|NP_915014.1| P0698A10.29 [Oryza sativa (japonica cultivar-group)] gi|20804774|dbj|BAB92459.1| P0698A1... |
| Match: gi|34905758|ref|NP_914226.1| |
score: 82.8 |
e-value: 2.4e-15 |
Identity: 72.22% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|34905758|ref|NP_914226.1| similar to RNA-binding protein [Oryza sativa (japonica cultivar-group)] gi|20146215|dbj|... |
| Match: gi|25518109|pir||B86356 |
score: 81.65 |
e-value: 5.4e-15 |
Identity: 33.95% |
Span: 486bp (94.0%) |
Frame: 3 |
| gi|25518109|pir||B86356 T16E15.6 protein - Arabidopsis thaliana gi|9392682|gb|AAF87259.1| Contains similarity to seb4... |
| Match: gi|18395106|ref|NP_564168.1| |
score: 81.26 |
e-value: 7e-15 |
Identity: 66.67% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|18395106|ref|NP_564168.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|21593674|gb|AAM... |
| Match: gi|18411885|ref|NP_565175.1| |
score: 78.95 |
e-value: 3.5e-14 |
Identity: 64.81% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi21537200|gb|AAM61541.1| RNA recognition moti... |
| Match: gi|25405025|pir||H96811 |
score: 78.95 |
e-value: 3.5e-14 |
Identity: 64.81% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|25405025|pir||H96811 protein F3F9.20 [imported] - Arabidopsis thaliana gi|8052542|gb|AAF71806.1| F3F9.20 [Arabidop... |
| Match: gi|28201883|sp|Q9H0Z9|RNP1_HUMAN |
score: 73.94 |
e-value: 1.1e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|28201883|sp|Q9H0Z9|RNP1_HUMAN RNA-binding region containing protein 1 (HSRNASEB) (ssDNA binding protein SEB4) (CLL... |
| Match: gi|34577107|ref|NP_059965.2| |
score: 73.94 |
e-value: 1.1e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|34577107|ref|NP_059965.2| RNA-binding region containing protein 1 isoform a; ssDNA binding protein SEB4; CLL-assoc... |
| Match: gi|34860882|ref|XP_345478.1| |
score: 73.17 |
e-value: 1.9e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|34860882|ref|XP_345478.1| similar to SEB4 [Rattus norvegicus] |
| Match: gi|9507075|ref|NP_062420.1| |
score: 73.17 |
e-value: 1.9e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|9507075|ref|NP_062420.1| seb4 mRNA; seb4 protein; seb4-like (Xenopus laevis) [Mus musculus] gi|28201881|sp|Q62176|... |
| Match: gi|407419|emb|CAA53063.1| |
score: 72.79 |
e-value: 2.5e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|407419|emb|CAA53063.1| SEB4D [Homo sapiens] |
| Match: gi|481241|pir||S38383 |
score: 72.79 |
e-value: 2.5e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|481241|pir||S38383 SEB4B protein - human (fragment) |
| Match: gi|407421|emb|CAA53064.1| |
score: 72.79 |
e-value: 2.5e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|407421|emb|CAA53064.1| SEB4B [Homo sapiens] |
| Match: gi|481240|pir||S38382 |
score: 72.79 |
e-value: 2.5e-12 |
Identity: 44.71% |
Span: 255bp (49.3%) |
Frame: 3 |
| gi|481240|pir||S38382 SEB4D protein - human (fragment) |
| Match: gi|8920429|emb|CAB96420.1| |
score: 72.02 |
e-value: 4.3e-12 |
Identity: 44.68% |
Span: 270bp (52.2%) |
Frame: 3 |
| gi|8920429|emb|CAB96420.1| hypothetical protein [Xenopus laevis] gi|27924271|gb|AAH44956.1| MGC52530 protein [Xenopus... |
| Match: gi|35902819|ref|NP_919356.1| |
score: 72.02 |
e-value: 4.3e-12 |
Identity: 46.43% |
Span: 252bp (48.7%) |
Frame: 3 |
| gi|35902819|ref|NP_919356.1| RNA-binding region containing protein 1 [Danio rerio] gi|31580878|dbj|BAC77543.1| hypoth... |
| Match: gi|8895698|gb|AAF81070.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|8895698|gb|AAF81070.1| RRM-containing protein SEB-4 [Xenopus laevis] |
| Match: gi|17569937|ref|NP_508674.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 61.82% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|17569937|ref|NP_508674.1| RNA recognition motif -containing protein (26.8 kD) (XE525) [Caenorhabditis elegans] gi|... |
| Match: gi|38074506|ref|XP_354752.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|38074506|ref|XP_354752.1| similar to dJ259A10.1 (ssDNA binding protein (SEB4D)) [Mus musculus] |
| Match: gi|13122236|emb|CAC32281.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|13122236|emb|CAC32281.1| dJ800J21.2.3 (ssDNA binding protein SEB4D (HSRNASEB), isoform 3) [Homo sapiens] |
| Match: gi|38174185|gb|AAH61322.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|38174185|gb|AAH61322.1| Unknown (protein for MGC:75808) [Silurana tropicalis] |
| Match: gi|34577105|ref|NP_906270.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|34577105|ref|NP_906270.1| RNA-binding region containing protein 1 isoform b; ssDNA binding protein SEB4; CLL-assoc... |
| Match: gi|27683811|ref|XP_214446.1| |
score: 71.63 |
e-value: 5.6e-12 |
Identity: 60% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|27683811|ref|XP_214446.1| similar to dJ259A10.1 (ssDNA binding protein (SEB4D)) [Rattus norvegicus] |
| Match: gi|13624461|emb|CAC36889.1| |
score: 70.09 |
e-value: 1.6e-11 |
Identity: 58.18% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|13624461|emb|CAC36889.1| dJ259A10.1 (ssDNA binding protein (SEB4D)) [Homo sapiens] |
| Match: gi|21754197|dbj|BAC04474.1| |
score: 70.09 |
e-value: 1.6e-11 |
Identity: 58.18% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|21754197|dbj|BAC04474.1| unnamed protein product [Homo sapiens] |
| Match: gi|31087962|gb|AAP42281.1| |
score: 69.32 |
e-value: 2.8e-11 |
Identity: 58.18% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|31087962|gb|AAP42281.1| RRM-type RNA-binding protein XSEB4R [Xenopus laevis] |
| Match: gi|15238805|ref|NP_200179.1| |
score: 67.4 |
e-value: 1e-10 |
Identity: 56.36% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|15238805|ref|NP_200179.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|9759062|dbj|BAB... |
| Match: gi|31240329|ref|XP_320578.1| |
score: 65.85 |
e-value: 3.1e-10 |
Identity: 56.36% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|31240329|ref|XP_320578.1| ENSANGP00000015329 [Anopheles gambiae] gi|21287926|gb|EAA00247.1| ENSANGP00000015329 [An... |
| Match: gi|15231350|ref|NP_187353.1| |
score: 63.54 |
e-value: 1.5e-09 |
Identity: 50% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|15231350|ref|NP_187353.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|6729004|gb|AAF2... |
| Match: gi|15238826|ref|NP_200183.1| |
score: 60.08 |
e-value: 1.7e-08 |
Identity: 50.91% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|15238826|ref|NP_200183.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] gi|9759066|dbj|BAB... |
| Match: gi|34912640|ref|NP_917667.1| |
score: 58.92 |
e-value: 3.7e-08 |
Identity: 54.55% |
Span: 165bp (31.9%) |
Frame: 3 |
| gi|34912640|ref|NP_917667.1| P0410E01.24 [Oryza sativa (japonica cultivar-group)] gi|11034579|dbj|BAB17103.1| P0410E0... |
| Match: gi|15232459|ref|NP_188119.1| |
score: 51.22 |
e-value: 7.8e-06 |
Identity: 46.3% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi42572443|ref|NP_974317.1| RNA recognition mo... |
| Match: gi|18399877|ref|NP_565525.1| |
score: 50.45 |
e-value: 1.3e-05 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana] >gi17380804|gb|AAL36089.1| putative RNA-binding protein [A... |
| Match: gi|30681615|ref|NP_850021.1| |
score: 50.45 |
e-value: 1.3e-05 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| UBP1 interacting protein 1a (UBA1a) [Arabidopsis thaliana] |
| Match: gi|21595502|gb|AAM66107.1| |
score: 50.45 |
e-value: 1.3e-05 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| putative RNA-binding protein [Arabidopsis thaliana] |
| Match: gi|19574236|emb|CAD28134.1| |
score: 50.06 |
e-value: 1.7e-05 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| UBP1 interacting protein 1a [Arabidopsis thaliana] |
| Match: gi|21741248|emb|CAD41732.1| |
score: 48.91 |
e-value: 3.9e-05 |
Identity: 52.08% |
Span: 144bp (27.9%) |
Frame: 3 |
| gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|6911144|gb|AAF31403.1| |
score: 48.14 |
e-value: 6.6e-05 |
Identity: 48.08% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|6911144|gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Catharanthus roseus] |
| Match: gi|15232459|ref|NP_188119.1| |
score: 47.37 |
e-value: 0.00011 |
Identity: 38.89% |
Span: 162bp (31.3%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi42572443|ref|NP_974317.1| RNA recognition mo... |
| Match: gi|7024451|dbj|BAA92156.1| |
score: 47.37 |
e-value: 0.00011 |
Identity: 48.08% |
Span: 153bp (29.6%) |
Frame: 3 |
| glycine-rich RNA-binding protein [Citrus unshiu] |
| Match: gi|38344030|emb|CAE01512.2| |
score: 46.98 |
e-value: 0.00015 |
Identity: 50% |
Span: 129bp (25.0%) |
Frame: 3 |
| OJ991214_12.1 [Oryza sativa (japonica cultivar-group)] >gi38346331|emb|CAE02067.2| OJ000126_13.13 [Oryza sativa (japo... |
| Match: gi|1346180|sp|P49310|GRP1_SINAL |
score: 46.21 |
e-value: 0.00025 |
Identity: 57.14% |
Span: 105bp (20.3%) |
Frame: 3 |
| gi|1346180|sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A gi|7439999|pir||T10463 glycine-rich protein 1a... |
| Match: gi|6911142|gb|AAF31402.1| |
score: 46.21 |
e-value: 0.00025 |
Identity: 46.15% |
Span: 153bp (29.6%) |
Frame: 3 |
| putative glycine-rich RNA binding protein 1 [Catharanthus roseus] |
| Match: gi|21553354|gb|AAM62447.1| |
score: 46.21 |
e-value: 0.00025 |
Identity: 50% |
Span: 132bp (25.5%) |
Frame: 3 |
| glycine-rich RNA binding protein 7 [Arabidopsis thaliana] |
| Match: gi|30681492|ref|NP_850017.1| |
score: 46.21 |
e-value: 0.00025 |
Identity: 50% |
Span: 132bp (25.5%) |
Frame: 3 |
| CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA bin... |
| Match: gi|1076731|pir||S53050 |
score: 46.21 |
e-value: 0.00025 |
Identity: 46.15% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|1076731|pir||S53050 RNA binding protein - barley gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding prote... |
| Match: gi|15226605|ref|NP_179760.1| |
score: 46.21 |
e-value: 0.00025 |
Identity: 50% |
Span: 132bp (25.5%) |
Frame: 3 |
| CCR2 (COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding / single-stranded DNA bin... |
| Match: gi|15229525|ref|NP_189025.1| |
score: 45.82 |
e-value: 0.00033 |
Identity: 41.51% |
Span: 156bp (30.2%) |
Frame: 3 |
| GRP4 (GLYCINE-RICH RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding / single-stranded DNA binding [A... |
| Match: gi|21553972|gb|AAM63053.1| |
score: 45.82 |
e-value: 0.00033 |
Identity: 41.51% |
Span: 156bp (30.2%) |
Frame: 3 |
| glycine-rich RNA binding protein, putative [Arabidopsis thaliana] |
| Match: gi|544426|sp|Q03878|GRP_DAUCA |
score: 45.44 |
e-value: 0.00043 |
Identity: 46.15% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|544426|sp|Q03878|GRP_DAUCA Glycine-rich RNA-binding protein gi|100155|pir||S14857 glycine-rich protein - carrot gi... |
| Match: gi|15822705|gb|AAL07519.1| |
score: 45.44 |
e-value: 0.00043 |
Identity: 31.76% |
Span: 252bp (48.7%) |
Frame: 3 |
| RNA-binding protein precursor [Solanum tuberosum] |
| Match: gi|21666573|gb|AAM73765.1| |
score: 45.44 |
e-value: 0.00043 |
Identity: 38.89% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|21666573|gb|AAM73765.1| RNA-binding protein AKIP1 [Vicia faba] |
| Match: gi|7439981|pir||S71779 |
score: 45.44 |
e-value: 0.00043 |
Identity: 46.15% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|7439981|pir||S71779 glycine-rich RNA-binding protein GRP1 - wheat gi|974605|gb|AAA75104.1| single-stranded nucleic... |
| Match: gi|3342756|gb|AAC41383.1| |
score: 45.44 |
e-value: 0.00043 |
Identity: 40.38% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum] |
| Match: gi|2119042|pir||S41771 |
score: 45.44 |
e-value: 0.00043 |
Identity: 52.27% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|2119042|pir||S41771 glycine-rich RNA-binding protein RGP-1a - wood tobacco gi|469070|dbj|BAA03741.1| RNA-binding g... |
| Match: gi|544416|sp|Q05966|GR10_BRANA |
score: 45.44 |
e-value: 0.00043 |
Identity: 42.31% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|544416|sp|Q05966|GR10_BRANA Glycine-rich RNA-binding protein 10 gi|541908|pir||S38331 glycine-rich RNA-binding pro... |
| Match: gi|7486241|pir||T01286 |
score: 45.05 |
e-value: 0.00056 |
Identity: 44.23% |
Span: 156bp (30.2%) |
Frame: 3 |
| gi|7486241|pir||T01286 probable RNA-binding protein At2g19380 - Arabidopsis thaliana |
| Match: gi|31241405|ref|XP_321133.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 38.64% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|31241405|ref|XP_321133.1| ENSANGP00000018356 [Anopheles gambiae] gi|21288679|gb|EAA00972.1| ENSANGP00000018356 [An... |
| Match: gi|18399023|ref|NP_565450.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 44.23% |
Span: 156bp (30.2%) |
Frame: 3 |
| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] >gi20197017|gb|AAC16468.2| putative RNA-binding... |
| Match: gi|30692254|ref|NP_849523.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 (GRP8) (CCR1) [Arabidopsis thaliana] |
| Match: gi|27882534|gb|AAH44487.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 68.97% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|27882534|gb|AAH44487.1| Similar to RNA-binding region (RNP1, RRM) containing 2 [Danio rerio] |
| Match: gi|30692256|ref|NP_849524.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 (GRP8) (CCR1) [Arabidopsis thaliana] |
| Match: gi|33150650|gb|AAP97203.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 62.07% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|33150650|gb|AAP97203.1| splicing factor SF2 [Homo sapiens] |
| Match: gi|2226370|gb|AAC50020.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 44.23% |
Span: 153bp (29.6%) |
Frame: 3 |
| RNA-binding protein [Nicotiana glutinosa] |
| Match: gi|15235002|ref|NP_195637.1| |
score: 45.05 |
e-value: 0.00056 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 (GRP8) (CCR1) [Arabidopsis thaliana] gi|544425|sp|Q03... |
| Match: gi|33416353|gb|AAH55525.1| |
score: 44.67 |
e-value: 0.00073 |
Identity: 45.45% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|33416353|gb|AAH55525.1| Unknown (protein for MGC:66169) [Danio rerio] |
| Match: gi|4704605|gb|AAD28176.1| |
score: 44.67 |
e-value: 0.00073 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| gi|4704605|gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca] |
| Match: gi|14596195|gb|AAK68825.1| |
score: 44.67 |
e-value: 0.00073 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi20148397|gb|AAM10089.1| putative protein [Arabidopsis thaliana] |
| Match: gi|18410591|ref|NP_567042.1| |
score: 44.67 |
e-value: 0.00073 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| UBP1 interacting protein 2a (UBA2a) [Arabidopsis thaliana] >gi30694526|ref|NP_850710.1| UBP1 interacting protein 2a (... |
| Match: gi|1346181|sp|P49311|GRP2_SINAL |
score: 44.67 |
e-value: 0.00073 |
Identity: 54.29% |
Span: 105bp (20.3%) |
Frame: 3 |
| gi|1346181|sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A gi|7440001|pir||T10465 glycine-rich protein 2a... |
| Match: gi|1076672|pir||S54255 |
score: 44.67 |
e-value: 0.00073 |
Identity: 42.31% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|1076672|pir||S54255 probable glycine rich RNA binding protein - potato gi|799015|emb|CAA89058.1| putative glycine ... |
| Match: gi|7439998|pir||T10479 |
score: 44.28 |
e-value: 0.001 |
Identity: 54.55% |
Span: 99bp (19.1%) |
Frame: 3 |
| gi|7439998|pir||T10479 glycine-rich RNA-binding protein GRP1 - Commerson's wild potato gi|1934994|emb|CAA73034.1| SGR... |
| Match: gi|30692258|ref|NP_849525.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 48.84% |
Span: 129bp (25.0%) |
Frame: 3 |
| gi|30692258|ref|NP_849525.1| glycine-rich RNA-binding protein 8 (GRP8) (CCR1) [Arabidopsis thaliana] |
| Match: gi|21483526|gb|AAM52738.1| |
score: 44.28 |
e-value: 0.001 |
Identity: 39.22% |
Span: 153bp (29.6%) |
Frame: 3 |
| gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster] |
| Match: gi|34860256|ref|XP_342558.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|34860256|ref|XP_342558.1| similar to RNA-binding region (RNP1, RRM) containing 2; splicing factor (CC1.3); coactiv... |
| Match: gi|34365067|emb|CAE45890.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens] |
| Match: gi|31873732|emb|CAD97833.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens] |
| Match: gi|35493817|ref|NP_909125.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|35493817|ref|NP_909125.1| RNA-binding region containing protein 2 isoform c; splicing factor CC1.3; coactivator of... |
| Match: gi|23237933|dbj|BAC16506.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 39.62% |
Span: 156bp (30.2%) |
Frame: 3 |
| gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa (japonica cultivar-group)] |
| Match: gi|35493822|ref|NP_909129.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|35493822|ref|NP_909129.1| RNA-binding region containing protein 2 isoform d; splicing factor CC1.3; coactivator of... |
| Match: gi|35493811|ref|NP_909122.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|35493811|ref|NP_909122.1| RNA-binding region containing protein 2 isoform a; splicing factor CC1.3; coactivator of... |
| Match: gi|18875412|ref|NP_573505.1| |
score: 43.9 |
e-value: 0.001 |
Identity: 65.52% |
Span: 87bp (16.8%) |
Frame: 3 |
| gi|18875412|ref|NP_573505.1| RNA-binding region containing protein 2; coactivator of activating protein-1 and estroge... |
| Match: gi|21483526|gb|AAM52738.1| |
score: 40.43 |
e-value: 0.014 |
Identity: 38% |
Span: 150bp (29.0%) |
Frame: 3 |
| gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster] |
| Match: gi|18410591|ref|NP_567042.1| |
score: 38.51 |
e-value: 0.052 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| UBP1 interacting protein 2a (UBA2a) [Arabidopsis thaliana] >gi30694526|ref|NP_850710.1| UBP1 interacting protein 2a (... |
| Match: gi|14596195|gb|AAK68825.1| |
score: 38.51 |
e-value: 0.052 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| putative protein [Arabidopsis thaliana] >gi20148397|gb|AAM10089.1| putative protein [Arabidopsis thaliana] |
| Match: gi|21741248|emb|CAD41732.1| |
score: 38.51 |
e-value: 0.052 |
Identity: 35.19% |
Span: 162bp (31.3%) |
Frame: 3 |
| gi|21741248|emb|CAD41732.1| OSJNBb0034I13.9 [Oryza sativa (japonica cultivar-group)] |
|
| 158 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 98 hits recorded |
| Match: At3g54770.1 |
score: 141 |
e-value: 3e-34 |
Identity: 49.73% |
Span: 513bp (99.2%) |
Frame: 3 |
| At3g54770.1 68410.m05605 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At1g20880.1 |
score: 90.12 |
e-value: 6.1e-19 |
Identity: 77.78% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g20880.1 68408.m02361 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At1g22910.1 |
score: 88.97 |
e-value: 1.4e-18 |
Identity: 74.07% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g22910.1 68408.m02591 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g76460.1 |
score: 88.97 |
e-value: 1.4e-18 |
Identity: 75.93% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g76460.1 68408.m08164 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At2g46780.1 |
score: 84.73 |
e-value: 2.6e-17 |
Identity: 69.09% |
Span: 165bp (31.9%) |
Frame: 3 |
| At2g46780.1 68409.m05273 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At1g33470.1 |
score: 83.96 |
e-value: 4.4e-17 |
Identity: 70.37% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g33470.1 68408.m03752 RNA recognition motif (RRM) - containing protein similar to RRM-containing protein SEB-4 [Xe... |
| Match: At1g22330.1 |
score: 81.26 |
e-value: 2.8e-16 |
Identity: 66.67% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g22330.1 68408.m02526 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At1g78260.1 |
score: 78.95 |
e-value: 1.4e-15 |
Identity: 64.81% |
Span: 162bp (31.3%) |
Frame: 3 |
| At1g78260.1 68408.m08366 RNA recognition motif (RRM) - containing protein similar to RNA recognition motif-containing... |
| Match: At5g53680.1 |
score: 67.4 |
e-value: 4.2e-12 |
Identity: 56.36% |
Span: 165bp (31.9%) |
Frame: 3 |
| At5g53680.1 68412.m06033 RNA recognition motif (RRM) - containing protein low similarity to RRM-containing protein SE... |
| Match: At3g06970.1 |
score: 63.54 |
e-value: 6.1e-11 |
Identity: 50% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g06970.1 68410.m00752 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At5g53720.1 |
score: 60.08 |
e-value: 6.8e-10 |
Identity: 50.91% |
Span: 165bp (31.9%) |
Frame: 3 |
| At5g53720.1 68412.m06041 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g15010.1 |
score: 51.22 |
e-value: 3.1e-07 |
Identity: 46.3% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At2g22090.2 |
score: 50.45 |
e-value: 5.4e-07 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| At2g22090.2 68409.m02378 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At2g22090.1 |
score: 50.45 |
e-value: 5.4e-07 |
Identity: 44.44% |
Span: 162bp (31.3%) |
Frame: 3 |
| At2g22090.1 68409.m02377 UBP1 interacting protein, putative similar to UBP1 interacting protein 1a [Arabidopsis thali... |
| Match: At3g15010.1 |
score: 47.37 |
e-value: 4.5e-06 |
Identity: 38.89% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g15010.1 68410.m01704 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At2g21660.1 |
score: 46.21 |
e-value: 1e-05 |
Identity: 50% |
Span: 132bp (25.5%) |
Frame: 3 |
| At2g21660.1 68409.m05724 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At2g21660.2 |
score: 46.21 |
e-value: 1e-05 |
Identity: 50% |
Span: 132bp (25.5%) |
Frame: 3 |
| At2g21660.2 68409.m05725 glycine-rich RNA-binding protein (AtGRP7) SP|Q03250 Glycine-rich RNA-binding protein 7 {Arab... |
| Match: At3g23830.2 |
score: 45.82 |
e-value: 1.3e-05 |
Identity: 41.51% |
Span: 156bp (30.2%) |
Frame: 3 |
| At3g23830.2 68410.m06795 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At3g23830.1 |
score: 45.82 |
e-value: 1.3e-05 |
Identity: 41.51% |
Span: 156bp (30.2%) |
Frame: 3 |
| At3g23830.1 68410.m06794 RNA-binding protein, putative similar to glycine-rich RNA binding protein 2 (AtGRP2) GB:CAA0... |
| Match: At2g19380.1 |
score: 45.05 |
e-value: 2.3e-05 |
Identity: 44.23% |
Span: 156bp (30.2%) |
Frame: 3 |
| At2g19380.1 68409.m02052 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At4g39260.2 |
score: 45.05 |
e-value: 2.3e-05 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| At4g39260.2 68411.m05437 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.3 |
score: 45.05 |
e-value: 2.3e-05 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| At4g39260.3 68411.m05438 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At4g39260.1 |
score: 45.05 |
e-value: 2.3e-05 |
Identity: 47.73% |
Span: 132bp (25.5%) |
Frame: 3 |
| At4g39260.1 68411.m05436 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At3g56860.3 |
score: 44.67 |
e-value: 2.9e-05 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 44.67 |
e-value: 2.9e-05 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.2 |
score: 44.67 |
e-value: 2.9e-05 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At4g39260.4 |
score: 44.28 |
e-value: 3.8e-05 |
Identity: 48.84% |
Span: 129bp (25.0%) |
Frame: 3 |
| At4g39260.4 68411.m05439 glycine-rich RNA-binding protein 8 (GRP8) (CCR1) SP|Q03251 Glycine-rich RNA-binding protein ... |
| Match: At1g74230.1 |
score: 43.51 |
e-value: 6.5e-05 |
Identity: 40.38% |
Span: 156bp (30.2%) |
Frame: 3 |
| At1g74230.1 68408.m07893 glycine-rich RNA-binding protein similar to RNA-binding protein GB:S46286 from [Nicotiana sy... |
| Match: At2g41060.1 |
score: 43.51 |
e-value: 6.5e-05 |
Identity: 38.89% |
Span: 162bp (31.3%) |
Frame: 3 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At4g26650.1 |
score: 43.13 |
e-value: 8.6e-05 |
Identity: 41.18% |
Span: 153bp (29.6%) |
Frame: 3 |
| At4g26650.1 68411.m03495 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g17370.1 |
score: 43.13 |
e-value: 8.6e-05 |
Identity: 37.74% |
Span: 156bp (30.2%) |
Frame: 3 |
| At1g17370.1 68408.m01912 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein [N... |
| Match: At3g13224.2 |
score: 42.36 |
e-value: 0.00015 |
Identity: 42.22% |
Span: 135bp (26.1%) |
Frame: 3 |
| At3g13224.2 68410.m01486 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At3g13224.1 |
score: 42.36 |
e-value: 0.00015 |
Identity: 42.22% |
Span: 135bp (26.1%) |
Frame: 3 |
| At3g13224.1 68410.m01485 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g06210.1 |
score: 42.36 |
e-value: 0.00015 |
Identity: 43.48% |
Span: 138bp (26.7%) |
Frame: 3 |
| At5g06210.1 68412.m00645 RNA-binding protein, putative contains similarity to RNA-binding protein from [Nicotiana tab... |
| Match: At1g17640.1 |
score: 41.59 |
e-value: 0.00025 |
Identity: 41.67% |
Span: 108bp (20.9%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At4g36960.1 |
score: 41.59 |
e-value: 0.00025 |
Identity: 48.48% |
Span: 99bp (19.1%) |
Frame: 3 |
| At4g36960.1 68411.m04762 RNA recognition motif (RRM) - containing protein similar to SP|P48809 Heterogeneous nuclear ... |
| Match: At3g52380.1 |
score: 41.59 |
e-value: 0.00025 |
Identity: 38.46% |
Span: 153bp (29.6%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At4g13850.1 |
score: 41.2 |
e-value: 0.00032 |
Identity: 39.62% |
Span: 156bp (30.2%) |
Frame: 3 |
| At4g13850.1 68411.m05250 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At1g54080.2 |
score: 41.2 |
e-value: 0.00032 |
Identity: 35.85% |
Span: 156bp (30.2%) |
Frame: 3 |
| At1g54080.2 68408.m08803 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At4g13850.2 |
score: 41.2 |
e-value: 0.00032 |
Identity: 39.62% |
Span: 156bp (30.2%) |
Frame: 3 |
| At4g13850.2 68411.m05251 glycine-rich RNA-binding protein (AtGRP2) glycine-rich RNA binding protein 2 AtGRP2 [Arabido... |
| Match: At1g54080.1 |
score: 41.2 |
e-value: 0.00032 |
Identity: 35.85% |
Span: 156bp (30.2%) |
Frame: 3 |
| At1g54080.1 68408.m08802 oligouridylate binding protein (UBP1), putative similar to oligouridylate binding protein GI... |
| Match: At3g26420.1 |
score: 41.2 |
e-value: 0.00032 |
Identity: 42.86% |
Span: 126bp (24.4%) |
Frame: 3 |
| At3g26420.1 68410.m03017 glycine-rich RNA-binding protein similar to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotian... |
| Match: At5g55550.1 |
score: 40.82 |
e-value: 0.00042 |
Identity: 39.22% |
Span: 153bp (29.6%) |
Frame: 3 |
| At5g55550.1 68412.m06263 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At5g55550.2 |
score: 40.82 |
e-value: 0.00042 |
Identity: 39.22% |
Span: 153bp (29.6%) |
Frame: 3 |
| At5g55550.2 68412.m06264 RNA recognition motif (RRM) - containing protein similar to DAZ associated protein 1 [Homo s... |
| Match: At3g14100.1 |
score: 40.82 |
e-value: 0.00042 |
Identity: 35.85% |
Span: 156bp (30.2%) |
Frame: 3 |
| At3g14100.1 68410.m01599 oligouridylate binding protein (UBP1), putative similar to GB:CAB75429 (GI:6996560) from [Ni... |
| Match: At2g41060.1 |
score: 40.43 |
e-value: 0.00055 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At2g41060.1 68409.m04594 RNA recognition motif (RRM) - containing protein similar to UBP1 interacting protein 1a [Ara... |
| Match: At2g22100.1 |
score: 40.43 |
e-value: 0.00055 |
Identity: 37.5% |
Span: 144bp (27.9%) |
Frame: 3 |
| At2g22100.1 68409.m02379 RRM-containing RNA-binding protein |
| Match: At5g47620.1 |
score: 40.43 |
e-value: 0.00055 |
Identity: 50% |
Span: 96bp (18.6%) |
Frame: 3 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.2 |
score: 40.43 |
e-value: 0.00055 |
Identity: 50% |
Span: 96bp (18.6%) |
Frame: 3 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At2g16260.1 |
score: 39.66 |
e-value: 0.001 |
Identity: 48.57% |
Span: 105bp (20.3%) |
Frame: 3 |
| At2g16260.1 68409.m01674 glycine-rich RNA-binding protein, putative similar to Glycine-rich RNA-binding protein from ... |
| Match: At3g07810.2 |
score: 38.89 |
e-value: 0.002 |
Identity: 48.39% |
Span: 93bp (18.0%) |
Frame: 3 |
| At3g07810.2 68410.m00863 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At3g07810.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 48.39% |
Span: 93bp (18.0%) |
Frame: 3 |
| At3g07810.1 68410.m00862 heterogeneous nuclear ribonucleoprotein (hnRNP), putative contains Pfam profile: PF00076 RNA... |
| Match: At5g47320.1 |
score: 38.89 |
e-value: 0.002 |
Identity: 41.3% |
Span: 138bp (26.7%) |
Frame: 3 |
| At5g47320.1 68412.m05259 40S ribosomal protein S19, mitochondrial precursor |
| Match: At2g37510.1 |
score: 38.51 |
e-value: 0.002 |
Identity: 50% |
Span: 96bp (18.6%) |
Frame: 3 |
| At2g37510.1 68409.m04161 RNA-binding protein, putative similar to SP|P10979 Glycine-rich RNA-binding, abscisic acid-i... |
| Match: At3g56860.2 |
score: 38.51 |
e-value: 0.002 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.2 68410.m06941 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.1 |
score: 38.51 |
e-value: 0.002 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.1 68410.m06940 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At3g56860.3 |
score: 38.51 |
e-value: 0.002 |
Identity: 37.04% |
Span: 162bp (31.3%) |
Frame: 3 |
| At3g56860.3 68410.m06942 RNA recognition motif (RRM) - containing protein low similarity to hnRNP A/B related protein... |
| Match: At5g61030.1 |
score: 38.51 |
e-value: 0.002 |
Identity: 42.86% |
Span: 105bp (20.3%) |
Frame: 3 |
| At5g61030.1 68412.m06929 RNA-binding protein, putative similar to RNA-binding protein from [Solanum tuberosum] GI:158... |
| Match: At4g13860.1 |
score: 38.12 |
e-value: 0.003 |
Identity: 32.73% |
Span: 162bp (31.3%) |
Frame: 3 |
| At4g13860.1 68411.m01943 RNA recognition motif (RRM) - containing protein similar to glycine-rich RNA binding protein... |
| Match: At5g51300.2 |
score: 37.74 |
e-value: 0.004 |
Identity: 45.71% |
Span: 105bp (20.3%) |
Frame: 3 |
| At5g51300.2 68412.m07949 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At4g00830.1 |
score: 37.74 |
e-value: 0.004 |
Identity: 36.54% |
Span: 153bp (29.6%) |
Frame: 3 |
| At4g00830.1 68411.m00105 RNA recognition motif (RRM) - containing protein similar to nucleolin protein; contains Inte... |
| Match: At5g51300.1 |
score: 37.74 |
e-value: 0.004 |
Identity: 45.71% |
Span: 105bp (20.3%) |
Frame: 3 |
| At5g51300.1 68412.m07948 splicing factor 1 (SF1), putative contains similarity to transcription or splicing factor |
| Match: At1g17640.1 |
score: 37.35 |
e-value: 0.005 |
Identity: 47.22% |
Span: 108bp (20.9%) |
Frame: 3 |
| At1g17640.1 68408.m01971 RNA recognition motif (RRM) - containing protein contains InterPro entry IPR000504: RNA-bind... |
| Match: At5g40490.1 |
score: 37.35 |
e-value: 0.005 |
Identity: 39.02% |
Span: 123bp (23.8%) |
Frame: 3 |
| At5g40490.1 68412.m04421 RNA recognition motif (RRM) - containing protein ribonucleoprotein, Xenopus laevis, PIR:S407... |
| Match: At1g71800.1 |
score: 36.96 |
e-value: 0.006 |
Identity: 37.5% |
Span: 141bp (27.3%) |
Frame: 3 |
| At1g71800.1 68408.m07614 cleavage stimulation factor, putative similar to cleavage stimulation factor 64 kilodalton s... |
| Match: At5g04280.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 38.64% |
Span: 132bp (25.5%) |
Frame: 3 |
| At5g04280.1 68412.m00390 glycine-rich RNA-binding protein |
| Match: At4g14300.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 50% |
Span: 78bp (15.1%) |
Frame: 3 |
| At4g14300.1 68411.m01996 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g59860.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 43.9% |
Span: 120bp (23.2%) |
Frame: 3 |
| At5g59860.1 68412.m06795 RNA recognition motif (RRM) - containing protein similar to SP|Q14011 Cold-inducible RNA-bin... |
| Match: At5g50250.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 40.43% |
Span: 138bp (26.7%) |
Frame: 3 |
| At5g50250.1 68412.m05614 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At4g24770.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 43.75% |
Span: 96bp (18.6%) |
Frame: 3 |
| At4g24770.1 68411.m03231 31 kDa ribonucleoprotein, chloroplast (RNA-binding protein RNP-T / RNA-binding protein 1/2/3... |
| Match: At3g53460.2 |
score: 36.58 |
e-value: 0.008 |
Identity: 46.88% |
Span: 96bp (18.6%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 46.88% |
Span: 96bp (18.6%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g52380.1 |
score: 36.58 |
e-value: 0.008 |
Identity: 44.12% |
Span: 102bp (19.7%) |
Frame: 3 |
| At3g52380.1 68410.m05334 33 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp33), putative similar to chloro... |
| Match: At3g46020.1 |
score: 36.19 |
e-value: 0.01 |
Identity: 43.18% |
Span: 129bp (25.0%) |
Frame: 3 |
| At3g46020.1 68410.m04612 RNA-binding protein, putative similar to Cold-inducible RNA-binding protein (Glycine-rich RN... |
| Match: At4g27000.1 |
score: 35.81 |
e-value: 0.014 |
Identity: 51.72% |
Span: 87bp (16.8%) |
Frame: 3 |
| At4g27000.1 68411.m03536 RNA binding protein 45 (RBP45), putative DNA binding protein ACBF - Nicotiana tabacum, PID:g... |
| Match: At5g54900.1 |
score: 35.42 |
e-value: 0.018 |
Identity: 51.72% |
Span: 87bp (16.8%) |
Frame: 3 |
| At5g54900.1 68412.m06186 RNA binding protein 45 (RBP45), putative contains similarity to polyadenylate-binding protei... |
| Match: At2g37220.1 |
score: 35.42 |
e-value: 0.018 |
Identity: 43.75% |
Span: 96bp (18.6%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At1g58470.1 |
score: 35.42 |
e-value: 0.018 |
Identity: 42.86% |
Span: 105bp (20.3%) |
Frame: 3 |
| At1g58470.1 68408.m06095 RNA-binding protein identical to RNA binding protein GI:6566348 from (Arabidopsis thaliana);... |
| Match: At2g33410.1 |
score: 35.04 |
e-value: 0.023 |
Identity: 33.33% |
Span: 126bp (24.4%) |
Frame: 3 |
| At2g33410.1 68409.m03704 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At1g60000.1 |
score: 35.04 |
e-value: 0.023 |
Identity: 36.54% |
Span: 153bp (29.6%) |
Frame: 3 |
| At1g60000.1 68408.m06195 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to 29 kDa... |
| Match: At3g20930.1 |
score: 35.04 |
e-value: 0.023 |
Identity: 40.91% |
Span: 129bp (25.0%) |
Frame: 3 |
| At3g20930.1 68410.m02397 RNA recognition motif (RRM) - containing protein contains Pfam profile: PF00076 RNA recognit... |
| Match: At1g47500.1 |
score: 35.04 |
e-value: 0.023 |
Identity: 42.86% |
Span: 126bp (24.4%) |
Frame: 3 |
| At1g47500.1 68408.m04832 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At1g47490.1 |
score: 35.04 |
e-value: 0.023 |
Identity: 42.86% |
Span: 126bp (24.4%) |
Frame: 3 |
| At1g47490.1 68408.m04830 RNA binding protein 47 (RBP47), putative similar to DNA binding protein GI:1899187 from [Nic... |
| Match: At1g11650.2 |
score: 34.65 |
e-value: 0.03 |
Identity: 48.28% |
Span: 87bp (16.8%) |
Frame: 3 |
| At1g11650.2 68408.m01205 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g22760.1 |
score: 34.65 |
e-value: 0.03 |
Identity: 52.94% |
Span: 102bp (19.7%) |
Frame: 3 |
| At1g22760.1 68408.m02574 polyadenylate-binding protein 3 (PABP3) |
| Match: At1g11650.1 |
score: 34.65 |
e-value: 0.03 |
Identity: 48.28% |
Span: 87bp (16.8%) |
Frame: 3 |
| At1g11650.1 68408.m01204 RNA binding protein 45 (RBP45), putative similar to gb|U90212 DNA binding protein ACBF from ... |
| Match: At1g18630.1 |
score: 34.65 |
e-value: 0.03 |
Identity: 41.18% |
Span: 102bp (19.7%) |
Frame: 3 |
| At1g18630.1 68408.m02096 glycine-rich RNA-binding protein, putative similar to glycine-rich RNA-binding protein from ... |
| Match: At3g19130.1 |
score: 34.27 |
e-value: 0.04 |
Identity: 46.88% |
Span: 96bp (18.6%) |
Frame: 3 |
| At3g19130.1 68410.m02193 RNA-binding protein, putative similar to RNA Binding Protein 47 [Nicotiana plumbaginifolia] ... |
| Match: At3g53460.2 |
score: 34.27 |
e-value: 0.04 |
Identity: 48.28% |
Span: 87bp (16.8%) |
Frame: 3 |
| At3g53460.2 68410.m06876 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At3g53460.1 |
score: 34.27 |
e-value: 0.04 |
Identity: 48.28% |
Span: 87bp (16.8%) |
Frame: 3 |
| At3g53460.1 68410.m06875 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29) nearly identical to SP|Q433... |
| Match: At5g19350.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 48.28% |
Span: 87bp (16.8%) |
Frame: 3 |
| At5g19350.1 68412.m02111 RNA binding protein 45 (RBP45), putative NULL |
| Match: At1g49600.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 51.72% |
Span: 87bp (16.8%) |
Frame: 3 |
| At1g49600.1 68408.m05095 RNA binding protein 47 (RBP47), putative similar to DNA binding protein ACBF GB:U90212 GI:18... |
| Match: At2g37220.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 44.83% |
Span: 87bp (16.8%) |
Frame: 3 |
| At2g37220.1 68409.m04132 29 kDa ribonucleoprotein, chloroplast (RNA-binding protein cp29), putative similar to SP|Q43... |
| Match: At3g16380.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 45.45% |
Span: 99bp (19.1%) |
Frame: 3 |
| At3g16380.1 68410.m01870 polyadenylate-binding protein (poly(A)-binding protein), putative similar to polyadenylate-b... |
| Match: At4g34110.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 40.91% |
Span: 132bp (25.5%) |
Frame: 3 |
| At4g34110.1 68411.m04401 polyadenylate-binding protein 2 (PABP2) non-consensus TA donor splice site at exon 2, polyad... |
| Match: At2g27330.1 |
score: 33.88 |
e-value: 0.052 |
Identity: 38.64% |
Span: 129bp (25.0%) |
Frame: 3 |
| At2g27330.1 68409.m02980 RRM-containing protein |
| Match: At5g47620.2 |
score: 33.11 |
e-value: 0.088 |
Identity: 28% |
Span: 150bp (29.0%) |
Frame: 3 |
| At5g47620.2 68412.m07923 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
| Match: At5g47620.1 |
score: 33.11 |
e-value: 0.088 |
Identity: 28% |
Span: 150bp (29.0%) |
Frame: 3 |
| At5g47620.1 68412.m07922 heterogeneous nuclear ribonucleoprotein (hnRNP), putative |
|
