| genbank/nr [blastx] | Showing best 25 hits recorded |
| Match: gi|255548938|ref|XP_002515525.1| |
score: 132 |
e-value: 2e-29 |
Identity: 92.68% |
Span: 246bp (49.3%) |
Frame: 2 |
| dead box ATP-dependent RNA helicase, putative [Ricinus communis] >gi223545469|gb|EEF46974.1| dead box ATP-dependent R... |
| Match: gi|224143128|ref|XP_002324856.1| |
score: 130 |
e-value: 4e-29 |
Identity: 91.46% |
Span: 246bp (49.3%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222866290|gb|EEF03421.1| predicted protein [Populus trichocarpa] |
| Match: gi|224156267|ref|XP_002337696.1| |
score: 130 |
e-value: 4e-29 |
Identity: 91.46% |
Span: 246bp (49.3%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222869567|gb|EEF06698.1| predicted protein [Populus trichocarpa] |
| Match: gi|224092470|ref|XP_002309623.1| |
score: 129 |
e-value: 1e-28 |
Identity: 91.46% |
Span: 246bp (49.3%) |
Frame: 2 |
| predicted protein [Populus trichocarpa] >gi222855599|gb|EEE93146.1| predicted protein [Populus trichocarpa] |
| Match: gi|225430261|ref|XP_002285072.1| |
score: 129 |
e-value: 1e-28 |
Identity: 89.02% |
Span: 246bp (49.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] |
| Match: gi|118482305|gb|ABK93079.1| |
score: 129 |
e-value: 1e-28 |
Identity: 91.46% |
Span: 246bp (49.3%) |
Frame: 2 |
| unknown [Populus trichocarpa] |
| Match: gi|225442993|ref|XP_002268833.1| |
score: 123 |
e-value: 8e-27 |
Identity: 87.8% |
Span: 246bp (49.3%) |
Frame: 2 |
| PREDICTED: hypothetical protein [Vitis vinifera] >gi270253910|emb|CBI36308.1| unnamed protein product [Vitis vinifera] |
| Match: gi|3776005|emb|CAA09205.1| |
score: 119 |
e-value: 1e-25 |
Identity: 83.72% |
Span: 258bp (51.7%) |
Frame: 2 |
| RNA helicase [Arabidopsis thaliana] |
| Match: gi|8953382|emb|CAB96655.1| |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD BOX RNA helicase RH15 [Arabidopsis thaliana] |
| Match: gi|238481240|ref|NP_001154707.1| |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative [Arabidopsis thaliana] |
| Match: gi|238481238|ref|NP_001154706.1| |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative [Arabidopsis thaliana] |
| Match: gi|8953379|emb|CAB96652.1| |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana] |
| Match: gi|18416493|ref|NP_568245.1| |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative [Arabidopsis thaliana] >gi186522075|ref|NP_568244.2| ATP binding / ATP-dependent hel... |
| Match: gi|110283023|sp|Q56XG6.2|RH15_ARATH |
score: 117 |
e-value: 5e-25 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| RecName: Full=DEAD-box ATP-dependent RNA helicase 15 |
| Match: gi|168059571|ref|XP_001781775.1| |
score: 115 |
e-value: 2e-24 |
Identity: 91.53% |
Span: 177bp (35.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162666777|gb|EDQ53423.1| predicted protein [Physcomitrella... |
| Match: gi|168035593|ref|XP_001770294.1| |
score: 115 |
e-value: 2e-24 |
Identity: 91.53% |
Span: 177bp (35.5%) |
Frame: 2 |
| predicted protein [Physcomitrella patens subsp. patens] >gi162678511|gb|EDQ64969.1| predicted protein [Physcomitrella... |
| Match: gi|255553153|ref|XP_002517619.1| |
score: 112 |
e-value: 2e-23 |
Identity: 82.93% |
Span: 246bp (49.3%) |
Frame: 2 |
| dead box ATP-dependent RNA helicase, putative [Ricinus communis] >gi223543251|gb|EEF44783.1| dead box ATP-dependent R... |
| Match: gi|226506726|ref|NP_001141599.1| |
score: 111 |
e-value: 3e-23 |
Identity: 81.93% |
Span: 249bp (49.9%) |
Frame: 2 |
| hypothetical protein LOC100273717 [Zea mays] >gi224032233|gb|ACN35192.1| unknown [Zea mays] |
| Match: gi|226528292|ref|NP_001149406.1| |
score: 110 |
e-value: 4e-23 |
Identity: 82.93% |
Span: 246bp (49.3%) |
Frame: 2 |
| spliceosome RNA helicase BAT1 [Zea mays] >gi195627032|gb|ACG35346.1| spliceosome RNA helicase BAT1 [Zea mays] |
| Match: gi|294461150|gb|ADE76139.1| |
score: 110 |
e-value: 4e-23 |
Identity: 82.93% |
Span: 246bp (49.3%) |
Frame: 2 |
| unknown [Picea sitchensis] |
| Match: gi|255645017|gb|ACU23008.1| |
score: 110 |
e-value: 4e-23 |
Identity: 84.15% |
Span: 246bp (49.3%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|255639223|gb|ACU19910.1| |
score: 110 |
e-value: 7e-23 |
Identity: 84.15% |
Span: 246bp (49.3%) |
Frame: 2 |
| unknown [Glycine max] |
| Match: gi|147769174|emb|CAN76234.1| |
score: 109 |
e-value: 1e-22 |
Identity: 82.93% |
Span: 246bp (49.3%) |
Frame: 2 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|270231706|emb|CBI21031.1| |
score: 109 |
e-value: 9e-23 |
Identity: 87.67% |
Span: 219bp (43.9%) |
Frame: 2 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|294461150|gb|ADE76139.1| |
score: 71.2 |
e-value: 4e-11 |
Identity: 100% |
Span: 108bp (21.6%) |
Frame: -3 |
| unknown [Picea sitchensis] |
|
| 207 lower scoring hits censored -- only 25 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 5 hits recorded |
| Match: At5G11170.1 |
score: 117 |
e-value: 4e-27 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3553335-3556647 FORWARD |
| Match: At5G11200.1 |
score: 117 |
e-value: 4e-27 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD/DEAH box helicase, putative | chr5:3567390-3570687 FORWARD |
| Match: At5G11200.1 |
score: 69.3 |
e-value: 1e-12 |
Identity: 97.22% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD/DEAH box helicase, putative | chr5:3567390-3570687 FORWARD |
| Match: At5G11170.1 |
score: 67 |
e-value: 6e-12 |
Identity: 94.44% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3553335-3556647 FORWARD |
| Match: At5G11170.2 |
score: 67 |
e-value: 6e-12 |
Identity: 94.44% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD/DEAH box helicase, putative (RH15) | chr5:3554273-3556647 FORWARD |
|
| swissprot [blastx] | Showing best 25 hits recorded |
| Match: Q9LFN6 |
score: 117 |
e-value: 4e-26 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2 |
| Match: Q56XG6 |
score: 117 |
e-value: 4e-26 |
Identity: 86.59% |
Span: 246bp (49.3%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=2 SV=2 |
| Match: Q5JK84 |
score: 96.3 |
e-value: 8e-20 |
Identity: 80.36% |
Span: 168bp (33.7%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2 SV=1 |
| Match: Q0JM17 |
score: 95.9 |
e-value: 1e-19 |
Identity: 83.33% |
Span: 162bp (32.5%) |
Frame: 2 |
| DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2 |
| Match: Q8VDW0 |
score: 90.1 |
e-value: 6e-18 |
Identity: 73.33% |
Span: 180bp (36.1%) |
Frame: 2 |
| ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1 |
| Match: O00148 |
score: 89.7 |
e-value: 8e-18 |
Identity: 71.67% |
Span: 180bp (36.1%) |
Frame: 2 |
| ATP-dependent RNA helicase DDX39 OS=Homo sapiens GN=DDX39 PE=1 SV=2 |
| Match: Q29024 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Sus scrofa GN=BAT1 PE=3 SV=2 |
| Match: P60024 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Pan troglodytes GN=BAT1 PE=3 SV=1 |
| Match: Q9Z1N5 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase Bat1 OS=Mus musculus GN=Bat1 PE=1 SV=1 |
| Match: Q5TM17 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Macaca mulatta GN=BAT1 PE=3 SV=1 |
| Match: Q13838 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1 |
| Match: Q5ZHZ0 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1 |
| Match: Q5WR10 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1 |
| Match: Q3T147 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1 |
| Match: Q5U216 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1 |
| Match: Q63413 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase Bat1 OS=Rattus norvegicus GN=Bat1 PE=2 SV=3 |
| Match: Q5RE47 |
score: 89 |
e-value: 1e-17 |
Identity: 87.5% |
Span: 144bp (28.9%) |
Frame: 2 |
| Spliceosome RNA helicase BAT1 OS=Pongo abelii GN=BAT1 PE=2 SV=1 |
| Match: Q5KNA3 |
score: 87.4 |
e-value: 4e-17 |
Identity: 67.65% |
Span: 192bp (38.5%) |
Frame: 2 |
| ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1 |
| Match: Q27268 |
score: 87 |
e-value: 5e-17 |
Identity: 83.33% |
Span: 144bp (28.9%) |
Frame: 2 |
| ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster GN=Hel25E PE=1 SV=1 |
| Match: O13792 |
score: 84.7 |
e-value: 3e-16 |
Identity: 77.59% |
Span: 168bp (33.7%) |
Frame: 2 |
| ATP-dependent RNA helicase uap56 OS=Schizosaccharomyces pombe GN=uap56 PE=1 SV=3 |
| Match: Q6CH90 |
score: 83.2 |
e-value: 7e-16 |
Identity: 63.49% |
Span: 189bp (37.9%) |
Frame: 2 |
| ATP-dependent RNA helicase SUB2 OS=Yarrowia lipolytica GN=SUB2 PE=3 SV=2 |
| Match: Q9LFN6 |
score: 69.3 |
e-value: 1e-11 |
Identity: 97.22% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2 |
| Match: Q0JM17 |
score: 67.4 |
e-value: 4e-11 |
Identity: 94.44% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2 |
| Match: Q5JK84 |
score: 67.4 |
e-value: 4e-11 |
Identity: 94.44% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2 SV=1 |
| Match: Q56XG6 |
score: 67 |
e-value: 5e-11 |
Identity: 94.44% |
Span: 108bp (21.6%) |
Frame: -3 |
| DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=2 SV=2 |
|
| 25 lower scoring hits censored -- only 25 best hits are stored. |
