| genbank/nr [blastx] | Showing best 18 hits recorded |
| Match: gi|15236074|ref|NP_193475.1| |
score: 51.22 |
e-value: 5.3e-06 |
Identity: 38.24% |
Span: 204bp (44.6%) |
Frame: 3 |
| gi|15236074|ref|NP_193475.1| retrotransposon like protein [Arabidopsis thaliana] gi|7444421|pir||A71444 probable LTR ... |
| Match: gi|25301673|pir||F96509 |
score: 50.06 |
e-value: 1.2e-05 |
Identity: 36.76% |
Span: 204bp (44.6%) |
Frame: 3 |
| gi|25301673|pir||F96509 protein F27F5.19 [imported] - Arabidopsis thaliana gi|7767664|gb|AAF69161.1| F27F5.19 [Arabid... |
| Match: gi|15235834|ref|NP_192523.1| |
score: 48.14 |
e-value: 4.5e-05 |
Identity: 35.94% |
Span: 189bp (41.4%) |
Frame: 3 |
| gi|15235834|ref|NP_192523.1| polyprotein -related [Arabidopsis thaliana] gi|25301678|pir||C85077 probable polyprotein... |
| Match: gi|15227405|ref|NP_178878.1| |
score: 46.59 |
e-value: 0.00013 |
Identity: 34.78% |
Span: 207bp (45.3%) |
Frame: 3 |
| gi|15227405|ref|NP_178878.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25411380|pir||H84495 pro... |
| Match: gi|15236993|ref|NP_192836.1| |
score: 46.21 |
e-value: 0.00017 |
Identity: 35.38% |
Span: 192bp (42.0%) |
Frame: 3 |
| gi|15236993|ref|NP_192836.1| hypothetical protein [Arabidopsis thaliana] gi|7486140|pir||T04293 hypothetical protein ... |
| Match: gi|7486705|pir||T01879 |
score: 46.21 |
e-value: 0.00017 |
Identity: 35.38% |
Span: 192bp (42.0%) |
Frame: 3 |
| gi|7486705|pir||T01879 hypothetical protein F8M12.17 - Arabidopsis thaliana gi|3513747|gb|AAC33963.1| contains simila... |
| Match: gi|8778880|gb|AAF79879.1| |
score: 44.67 |
e-value: 0.0005 |
Identity: 35.59% |
Span: 177bp (38.7%) |
Frame: 3 |
| gi|8778880|gb|AAF79879.1| T7N9.5 [Arabidopsis thaliana] |
| Match: gi|15222522|ref|NP_177159.1| |
score: 44.67 |
e-value: 0.0005 |
Identity: 40.68% |
Span: 177bp (38.7%) |
Frame: 3 |
| gi|15222522|ref|NP_177159.1| hypothetical protein [Arabidopsis thaliana] gi|25301690|pir||G96722 hypothetical protein... |
| Match: gi|15233899|ref|NP_192686.1| |
score: 44.28 |
e-value: 0.00065 |
Identity: 33.85% |
Span: 192bp (42.0%) |
Frame: 3 |
| gi|15233899|ref|NP_192686.1| hypothetical protein [Arabidopsis thaliana] gi|25407502|pir||F85096 hypothetical protein... |
| Match: gi|15236328|ref|NP_192262.1| |
score: 43.9 |
e-value: 0.00019 |
Identity: 36.36% |
Span: 231bp (50.5%) |
Frame: 3 |
| gi|15236328|ref|NP_192262.1| reverse transcriptase -related [Arabidopsis thaliana] gi|25407205|pir||G85044 probable r... |
| Match: gi|15233456|ref|NP_193182.1| |
score: 42.74 |
e-value: 0.002 |
Identity: 35.38% |
Span: 192bp (42.0%) |
Frame: 3 |
| gi|15233456|ref|NP_193182.1| retrovirus-related like polyprotein [Arabidopsis thaliana] gi|7488175|pir||G71406 probab... |
| Match: gi|7488558|pir||T14517 |
score: 41.2 |
e-value: 0.006 |
Identity: 35.59% |
Span: 177bp (38.7%) |
Frame: 3 |
| gi|7488558|pir||T14517 hypothetical protein 1 - wild cabbage transposon Melmoth gi|2462935|emb|CAA72989.1| unnamed pr... |
| Match: gi|15218169|ref|NP_173545.1| |
score: 39.66 |
e-value: 0.016 |
Identity: 31.34% |
Span: 201bp (44.0%) |
Frame: 3 |
| gi|15218169|ref|NP_173545.1| expressed protein [Arabidopsis thaliana] |
| Match: gi|15231509|ref|NP_189711.1| |
score: 39.66 |
e-value: 0.016 |
Identity: 30.36% |
Span: 168bp (36.8%) |
Frame: 3 |
| gi|15231509|ref|NP_189711.1| hypothetical protein [Arabidopsis thaliana] gi|8777581|dbj|BAA97099.1| retroelement pol ... |
| Match: gi|25301682|pir||G86301 |
score: 38.89 |
e-value: 0.027 |
Identity: 33.78% |
Span: 216bp (47.3%) |
Frame: 3 |
| gi|25301682|pir||G86301 probable retroelement polyprotein [imported] - Arabidopsis thaliana gi|9989054|gb|AAG10817.1|... |
| Match: gi|22331571|ref|NP_683674.1| |
score: 38.12 |
e-value: 0.047 |
Identity: 35.94% |
Span: 189bp (41.4%) |
Frame: 3 |
| gi|22331571|ref|NP_683674.1| retroelement pol polyprotein -related [Arabidopsis thaliana] |
| Match: gi|15226657|ref|NP_179198.1| |
score: 38.12 |
e-value: 0.047 |
Identity: 34.38% |
Span: 189bp (41.4%) |
Frame: 3 |
| gi|15226657|ref|NP_179198.1| retroelement pol polyprotein -related [Arabidopsis thaliana] gi|25301694|pir||E84535 pro... |
| Match: gi|15236328|ref|NP_192262.1| |
score: 21.56 |
e-value: 0.00019 |
Identity: 40% |
Span: 45bp (9.8%) |
Frame: 2 |
| gi|15236328|ref|NP_192262.1| reverse transcriptase -related [Arabidopsis thaliana] gi|25407205|pir||G85044 probable r... |
|
| arabidopsis/peptide [blastx] | Showing best 17 hits recorded |
| Match: At4g17450.1 |
score: 51.22 |
e-value: 2.4e-07 |
Identity: 38.24% |
Span: 204bp (44.6%) |
Frame: 3 |
| At4g17450.1 68411.m02377 retrotransposon like protein |
| Match: At4g07810.1 |
score: 48.14 |
e-value: 2.1e-06 |
Identity: 35.94% |
Span: 189bp (41.4%) |
Frame: 3 |
| At4g07810.1 68411.m01111 polyprotein -related |
| Match: At2g11140.1 |
score: 46.59 |
e-value: 6e-06 |
Identity: 34.78% |
Span: 207bp (45.3%) |
Frame: 3 |
| At2g11140.1 68409.m01065 retroelement pol polyprotein -related |
| Match: At4g10980.1 |
score: 46.21 |
e-value: 7.8e-06 |
Identity: 35.38% |
Span: 192bp (42.0%) |
Frame: 3 |
| At4g10980.1 68411.m01614 hypothetical protein various predicted retrotransposons |
| Match: At1g70010.1 |
score: 44.67 |
e-value: 2.3e-05 |
Identity: 40.68% |
Span: 177bp (38.7%) |
Frame: 3 |
| At1g70010.1 68408.m07390 hypothetical protein similar to putative retroelement pol polyprotein GI:4678197 from [Arabi... |
| Match: At4g09480.1 |
score: 44.28 |
e-value: 3e-05 |
Identity: 33.85% |
Span: 192bp (42.0%) |
Frame: 3 |
| At4g09480.1 68411.m01407 hypothetical protein retrovirus-related polyproteins |
| Match: At4g03530.1 |
score: 43.9 |
e-value: 8.5e-06 |
Identity: 36.36% |
Span: 231bp (50.5%) |
Frame: 3 |
| At4g03530.1 68411.m00440 reverse transcriptase -related |
| Match: At4g14460.1 |
score: 42.74 |
e-value: 8.6e-05 |
Identity: 35.38% |
Span: 192bp (42.0%) |
Frame: 3 |
| At4g14460.1 68411.m02019 retrovirus-related like polyprotein |
| Match: At3g31023.1 |
score: 39.66 |
e-value: 0.00073 |
Identity: 30.36% |
Span: 168bp (36.8%) |
Frame: 3 |
| At3g31023.1 68410.m03672 hypothetical protein |
| Match: At1g21220.1 |
score: 39.66 |
e-value: 0.00073 |
Identity: 31.34% |
Span: 201bp (44.0%) |
Frame: 3 |
| At1g21220.1 68408.m02398 expressed protein |
| Match: At3g43955.1 |
score: 38.12 |
e-value: 0.002 |
Identity: 35.94% |
Span: 189bp (41.4%) |
Frame: 3 |
| At3g43955.1 68410.m04359 retroelement pol polyprotein -related temporary automated functional assignment |
| Match: At2g16000.1 |
score: 38.12 |
e-value: 0.002 |
Identity: 34.38% |
Span: 189bp (41.4%) |
Frame: 3 |
| At2g16000.1 68409.m01646 retroelement pol polyprotein -related |
| Match: At2g04490.1 |
score: 36.96 |
e-value: 0.005 |
Identity: 37.5% |
Span: 189bp (41.4%) |
Frame: 3 |
| At2g04490.1 68409.m00404 retroelement pol polyprotein -related |
| Match: At2g20460.1 |
score: 36.58 |
e-value: 0.006 |
Identity: 28.17% |
Span: 213bp (46.6%) |
Frame: 3 |
| At2g20460.1 68409.m02171 retroelement pol polyprotein -related |
| Match: At2g23330.1 |
score: 34.65 |
e-value: 0.024 |
Identity: 34.88% |
Span: 129bp (28.2%) |
Frame: 3 |
| At2g23330.1 68409.m02521 retroelement pol polyprotein -related |
| Match: At2g15870.1 |
score: 34.27 |
e-value: 0.031 |
Identity: 26.76% |
Span: 213bp (46.6%) |
Frame: 3 |
| At2g15870.1 68409.m01633 retroelement pol polyprotein -related contains signature integrase DDE motif |
| Match: At4g03530.1 |
score: 21.56 |
e-value: 8.5e-06 |
Identity: 40% |
Span: 45bp (9.8%) |
Frame: 2 |
| At4g03530.1 68411.m00440 reverse transcriptase -related |
|
