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All Stored BLAST annotations for SGN-U206859
genbank/nr [blastx] Showing best 49 hits recorded
Match: gi|421960|pir||S34448 score: 134.4 e-value: 3.5e-31 Identity: 98.51% Span: 201bp (44.1%) Frame: -2
gi|421960|pir||S34448 small nuclear ribonucleoprotein U2B'' - potato gi|169589|gb|AAA33847.1| spliceosomal protein
Match: gi|21593001|gb|AAM64950.1| score: 117.1 e-value: 7.9e-26 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Match: gi|15227729|ref|NP_180585.1| score: 117.1 e-value: 7.9e-26 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
U2B'' (U2 small nuclear ribonucleoprotein B); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis th...
Match: gi|30679897|ref|NP_172177.3| score: 114 e-value: 6.7e-25 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana]
Match: gi|25294325|pir||C86204 score: 114 e-value: 6.7e-25 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
gi|25294325|pir||C86204 hypothetical protein [imported] - Arabidopsis thaliana gi|8954049|gb|AAF82223.1| Strong simil...
Match: gi|30679892|ref|NP_850936.1| score: 114 e-value: 6.7e-25 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative [Arabidopsis thaliana] >gi23296313|gb|...
Match: gi|19347861|gb|AAL85989.1| score: 112.5 e-value: 1.9e-24 Identity: 76.12% Span: 201bp (44.1%) Frame: -2
putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Match: gi|2119045|pir||S59117 score: 110.5 e-value: 7.4e-24 Identity: 76.12% Span: 201bp (44.1%) Frame: -2
gi|2119045|pir||S59117 small nuclear ribonucleoprotein U1A - potato gi|1050840|emb|CAA90282.1| U1snRNP-specific prote...
Match: gi|15226631|ref|NP_182280.1| score: 98.21 e-value: 3.8e-20 Identity: 74.63% Span: 201bp (44.1%) Frame: -2
U1A (SPLICEOSOMAL PROTEIN U1A); RNA binding / nucleic acid binding / nucleotide binding [Arabidopsis thaliana] >gi105...
Match: gi|34897622|ref|NP_910157.1| score: 97.83 e-value: 5e-20 Identity: 68.66% Span: 201bp (44.1%) Frame: -2
gi|34897622|ref|NP_910157.1| putative small nuclear ribonucleoprotein U1A [Oryza sativa] gi|14595706|gb|AAK70905.1| p...
Match: gi|4507123|ref|NP_003083.1| score: 83.96 e-value: 7.4e-16 Identity: 58.21% Span: 201bp (44.1%) Frame: -2
gi|4507123|ref|NP_003083.1| small nuclear ribonucleoprotein polypeptide B''; U2 small nuclear ribonucleoprotein B'' [...
Match: gi|1083555|pir||S54857 score: 83.96 e-value: 7.4e-16 Identity: 58.21% Span: 201bp (44.1%) Frame: -2
gi|1083555|pir||S54857 small nuclear ribonucleoprotein U2B'' - mouse (fragment) gi|840823|emb|CAA44752.1| U2-snRNP-sp...
Match: gi|23956110|ref|NP_067310.1| score: 83.96 e-value: 7.4e-16 Identity: 58.21% Span: 201bp (44.1%) Frame: -2
gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B [Mus musculus] gi|12847289|dbj|BAB27510.1| unnamed ...
Match: gi|34858820|ref|XP_342529.1| score: 83.96 e-value: 7.4e-16 Identity: 58.21% Span: 201bp (44.1%) Frame: -2
gi|34858820|ref|XP_342529.1| similar to U2 small nuclear ribonucleoprotein B [Rattus norvegicus]
Match: gi|12850013|dbj|BAB28565.1| score: 82.42 e-value: 2.2e-15 Identity: 58.21% Span: 201bp (44.1%) Frame: -2
gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Match: gi|17737284|ref|NP_511045.1| score: 81.65 e-value: 3.7e-15 Identity: 56.72% Span: 201bp (44.1%) Frame: -2
gi|17737284|ref|NP_511045.1| sans fille CG4528-PA [Drosophila melanogaster] gi|1173325|sp|P43332|RU1A_DROME U1 small ...
Match: gi|840821|emb|CAA44751.1| score: 81.65 e-value: 3.7e-15 Identity: 56.72% Span: 201bp (44.1%) Frame: -2
gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Match: gi|543325|pir||S42114 score: 81.26 e-value: 4.8e-15 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|543325|pir||S42114 small nuclear ribonucleoprotein U1A - mouse gi|349004|gb|AAC37611.1| small nuclear RNA gi|13096...
Match: gi|34855379|ref|XP_214845.2| score: 81.26 e-value: 4.8e-15 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|34855379|ref|XP_214845.2| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Rattus norvegicus]
Match: gi|4759156|ref|NP_004587.1| score: 81.26 e-value: 4.8e-15 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|4759156|ref|NP_004587.1| small nuclear ribonucleoprotein polypeptide A [Homo sapiens] gi|134092|sp|P09012|RU1A_HUM...
Match: gi|2554638|pdb|2U1A| score: 81.26 e-value: 4.8e-15 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|2554638|pdb|2U1A| Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20 Structures
Match: gi|31980689|ref|NP_056597.2| score: 81.26 e-value: 4.8e-15 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|31980689|ref|NP_056597.2| small nuclear ribonucleoprotein polypeptide A; protein A of the U1 small nuclear RNA; U1...
Match: gi|27924189|gb|AAH44979.1| score: 80.88 e-value: 6.3e-15 Identity: 53.73% Span: 201bp (44.1%) Frame: -2
gi|27924189|gb|AAH44979.1| Snf-prov protein [Xenopus laevis]
Match: gi|1173326|sp|P45429|RU1A_XENLA score: 80.88 e-value: 6.3e-15 Identity: 53.73% Span: 201bp (44.1%) Frame: -2
gi|1173326|sp|P45429|RU1A_XENLA U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) gi|345608|pir||S30564 small...
Match: gi|31240911|ref|XP_320869.1| score: 79.34 e-value: 1.8e-14 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|31240911|ref|XP_320869.1| ENSANGP00000019197 [Anopheles gambiae] gi|21288097|gb|EAA00418.1| ENSANGP00000019197 [An...
Match: gi|37748043|gb|AAH59527.1| score: 78.57 e-value: 3.1e-14 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|37748043|gb|AAH59527.1| Unknown (protein for IMAGE:4201535) [Danio rerio]
Match: gi|38090057|ref|XP_356179.1| score: 77.03 e-value: 9.1e-14 Identity: 52.24% Span: 201bp (44.1%) Frame: -2
gi|38090057|ref|XP_356179.1| similar to U1 small nuclear ribonucleoprotein A (U1 snRNP A protein) [Mus musculus]
Match: gi|38093673|ref|XP_111314.2| score: 75.1 e-value: 3.4e-13 Identity: 50.75% Span: 201bp (44.1%) Frame: -2
gi|38093673|ref|XP_111314.2| similar to GLE1-like, RNA export mediator; GLE1 (yeast homolog)-like, RNA export mediato...
Match: gi|38081798|ref|XP_354985.1| score: 75.1 e-value: 3.4e-13 Identity: 55.22% Span: 201bp (44.1%) Frame: -2
gi|38081798|ref|XP_354985.1| similar to small nuclear RNA [Mus musculus]
Match: gi|38093624|ref|XP_358084.1| score: 75.1 e-value: 3.4e-13 Identity: 50.75% Span: 201bp (44.1%) Frame: -2
gi|38093624|ref|XP_358084.1| similar to small nuclear RNA [Mus musculus]
Match: gi|38073944|ref|XP_354725.1| score: 75.1 e-value: 3.4e-13 Identity: 50.75% Span: 201bp (44.1%) Frame: -2
gi|38073944|ref|XP_354725.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus]
Match: gi|38073622|ref|XP_138180.3| score: 74.71 e-value: 4.5e-13 Identity: 50.75% Span: 201bp (44.1%) Frame: -2
gi|38073622|ref|XP_138180.3| similar to U2 small nuclear ribonucleoprotein B [Mus musculus]
Match: gi|38093549|ref|XP_358059.1| score: 72.4 e-value: 2.2e-12 Identity: 49.25% Span: 201bp (44.1%) Frame: -2
gi|38093549|ref|XP_358059.1| similar to U2 small nuclear ribonucleoprotein B [Mus musculus]
Match: gi|17541324|ref|NP_500504.1| score: 67.01 e-value: 9.4e-11 Identity: 44.78% Span: 201bp (44.1%) Frame: -2
gi|17541324|ref|NP_500504.1| small nuclear ribonucleoprotein (rnp-2) [Caenorhabditis elegans] gi|15055398|gb|AAA98032...
Match: gi|7505522|pir||T29387 score: 67.01 e-value: 9.4e-11 Identity: 44.78% Span: 201bp (44.1%) Frame: -2
gi|7505522|pir||T29387 hypothetical protein K08D10.4 - Caenorhabditis elegans
Match: gi|23613861|ref|NP_704882.1| score: 62.39 e-value: 2.3e-09 Identity: 50% Span: 192bp (42.1%) Frame: -2
gi|23613861|ref|NP_704882.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium falciparum 3D7] gi|2350524...
Match: gi|23485600|gb|EAA20485.1| score: 59.69 e-value: 1.5e-08 Identity: 47.62% Span: 189bp (41.4%) Frame: -2
gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii]
Match: gi|19113216|ref|NP_596424.1| score: 53.14 e-value: 1.4e-06 Identity: 37.31% Span: 201bp (44.1%) Frame: -2
gi|19113216|ref|NP_596424.1| Small nuclear ribonucleoprotein [Schizosaccharomyces pombe] gi|7493412|pir||T40479 small...
Match: gi|17541322|ref|NP_500505.1| score: 51.22 e-value: 5.3e-06 Identity: 37.29% Span: 177bp (38.8%) Frame: -2
gi|17541322|ref|NP_500505.1| small nuclear ribonucleoprotein (rnp-3) [Caenorhabditis elegans] gi|7505521|pir||T29388 ...
Match: gi|38111102|gb|EAA56730.1| score: 43.51 e-value: 0.001 Identity: 33.33% Span: 177bp (38.8%) Frame: -2
gi|38111102|gb|EAA56730.1| hypothetical protein MG07085.4 [Magnaporthe grisea 70-15]
Match: gi|23619006|ref|NP_704968.1| score: 43.13 e-value: 0.001 Identity: 39.29% Span: 168bp (36.8%) Frame: -2
gi|23619006|ref|NP_704968.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium falciparum 3D7] gi|23615213|e...
Match: gi|32416524|ref|XP_328740.1| score: 42.74 e-value: 0.002 Identity: 32.35% Span: 201bp (44.1%) Frame: -2
gi|32416524|ref|XP_328740.1| hypothetical protein [Neurospora crassa] gi|28924315|gb|EAA33468.1| hypothetical protein...
Match: gi|25144919|ref|NP_741446.1| score: 41.59 e-value: 0.004 Identity: 38.89% Span: 162bp (35.5%) Frame: -2
gi|25144919|ref|NP_741446.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (20.5 kD) (rsp-6) [Caenorhabditis ...
Match: gi|25144924|ref|NP_741448.1| score: 41.59 e-value: 0.004 Identity: 38.89% Span: 162bp (35.5%) Frame: -2
gi|25144924|ref|NP_741448.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (12.9 kD) (rsp-6) [Caenorhabditis ...
Match: gi|25144922|ref|NP_741447.1| score: 41.59 e-value: 0.004 Identity: 38.89% Span: 162bp (35.5%) Frame: -2
gi|25144922|ref|NP_741447.1| serine/aRginine rich pre-mRNA SPlicing factor, Serpin (16.4 kD) (rsp-6) [Caenorhabditis ...
Match: gi|29841408|gb|AAP06440.1| score: 40.82 e-value: 0.007 Identity: 39.22% Span: 153bp (33.6%) Frame: -2
gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Match: gi|25553563|dbj|BAC24834.1| score: 40.05 e-value: 0.012 Identity: 40% Span: 126bp (27.6%) Frame: -2
gi|25553563|dbj|BAC24834.1| OSJNBa0038F22.13 [Oryza sativa (japonica cultivar-group)]
Match: gi|23304837|emb|CAD48198.1| score: 38.51 e-value: 0.036 Identity: 33.33% Span: 177bp (38.8%) Frame: -2
RNA-binding protein [Medicago truncatula]
Match: gi|421960|pir||S34448 score: 21.56 e-value: 3.5e-31 Identity: 80% Span: 30bp (6.6%) Frame: -1
gi|421960|pir||S34448 small nuclear ribonucleoprotein U2B'' - potato gi|169589|gb|AAA33847.1| spliceosomal protein

arabidopsis/peptide [blastx] Showing best 5 hits recorded
Match: At2g30260.1 score: 117.1 e-value: 3.6e-27 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
At2g30260.1 68409.m03337 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative similar to spliceosomal...
Match: At1g06960.1 score: 114 e-value: 3.1e-26 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
At1g06960.1 68408.m09157 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative non-consensus splice do...
Match: At1g06960.2 score: 114 e-value: 3.1e-26 Identity: 77.61% Span: 201bp (44.1%) Frame: -2
At1g06960.2 68408.m09158 small nuclear ribonucleoprotein U2B (spliceosomal protein), putative non-consensus splice do...
Match: At2g47580.1 score: 98.21 e-value: 1.7e-21 Identity: 74.63% Span: 201bp (44.1%) Frame: -2
At2g47580.1 68409.m05362 small nuclear ribonucleoprotein (spliceosomal protein) U1A identical to GB:Z49991 U1snRNP-sp...
Match: At4g12630.1 score: 35.42 e-value: 0.014 Identity: 32.31% Span: 189bp (41.4%) Frame: -2
At4g12630.1 68411.m01802 RNA recognition motif (RRM) - containing protein similar to serine/arginine rich protein SF2...