| genbank/nr [blastx] | Showing best 100 hits recorded |
| Match: gi|92873803|gb|ABE82177.1| |
score: 145 |
e-value: 7e-34 |
Identity: 88.31% |
Span: 231bp (53.7%) |
Frame: 1 |
| Like-Sm |
| Match: gi|115486505|ref|NP_001068396.1| |
score: 145 |
e-value: 7e-34 |
Identity: 88.31% |
Span: 231bp (53.7%) |
Frame: 1 |
| Os11g0657300 [Oryza sativa (japonica cultivar-group)] >gi77552372|gb|ABA95169.1| small nuclear ribonucleoprotein F, p... |
| Match: gi|115444577|ref|NP_001046068.1| |
score: 145 |
e-value: 7e-34 |
Identity: 88.31% |
Span: 231bp (53.7%) |
Frame: 1 |
| Os02g0177500 [Oryza sativa (japonica cultivar-group)] >gi50252055|dbj|BAD27986.1| putative small nuclear ribonucleopr... |
| Match: gi|77552373|gb|ABA95170.1| |
score: 142 |
e-value: 8e-33 |
Identity: 88% |
Span: 225bp (52.3%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| Match: gi|15234669|ref|NP_194751.1| |
score: 142 |
e-value: 5e-33 |
Identity: 85.71% |
Span: 231bp (53.7%) |
Frame: 1 |
| RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F) [Arabidopsis thaliana] >gi10720264|sp|Q9SUM2.1|RUXF_ARATH RecName: Full=Prob... |
| Match: gi|125581016|gb|EAZ21947.1| |
score: 142 |
e-value: 8e-33 |
Identity: 88% |
Span: 225bp (52.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|110760095|ref|XP_001120305.1| |
score: 131 |
e-value: 1e-29 |
Identity: 80% |
Span: 225bp (52.3%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|119892594|ref|XP_001255659.1| |
score: 131 |
e-value: 1e-29 |
Identity: 71.08% |
Span: 249bp (57.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|74353864|gb|AAI02193.1| |
score: 131 |
e-value: 1e-29 |
Identity: 71.08% |
Span: 249bp (57.9%) |
Frame: 1 |
| gi|74353864|gb|AAI02193.1| Unknown (protein for IMAGE:7943169) [Bos taurus] |
| Match: gi|73978207|ref|XP_539726.2| |
score: 129 |
e-value: 4e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|73978207|ref|XP_539726.2| PREDICTED: similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) ... |
| Match: gi|115961655|ref|XP_001187173.1| |
score: 129 |
e-value: 5e-29 |
Identity: 70.45% |
Span: 261bp (60.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|83027678|ref|XP_897720.1| |
score: 129 |
e-value: 4e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|41946811|gb|AAH66015.1| |
score: 129 |
e-value: 4e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| gi|41946811|gb|AAH66015.1| Unknown (protein for IMAGE:5715059) [Mus musculus] |
| Match: gi|94388852|ref|XP_919276.2| |
score: 129 |
e-value: 4e-29 |
Identity: 75.32% |
Span: 231bp (53.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|495021|gb|AAA28445.1| |
score: 129 |
e-value: 5e-29 |
Identity: 78.67% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|495021|gb|AAA28445.1| membrane-associated protein |
| Match: gi|48145619|emb|CAG33032.1| |
score: 129 |
e-value: 5e-29 |
Identity: 78.38% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|48145619|emb|CAG33032.1| SNRPF [Homo sapiens] |
| Match: gi|126339687|ref|XP_001371072.1| |
score: 129 |
e-value: 5e-29 |
Identity: 78.38% |
Span: 222bp (51.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|4507131|ref|NP_003086.1| |
score: 129 |
e-value: 5e-29 |
Identity: 78.38% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|4507131|ref|NP_003086.1| small nuclear ribonucleoprotein polypeptide F [Homo sapiens] gi|6094209|sp|Q15356|RUXF_HU... |
| Match: gi|125538311|gb|EAY84706.1| |
score: 129 |
e-value: 4e-29 |
Identity: 68.75% |
Span: 225bp (52.3%) |
Frame: 1 |
| hypothetical |
| Match: gi|22024001|ref|NP_523708.2| |
score: 129 |
e-value: 5e-29 |
Identity: 78.67% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|22024001|ref|NP_523708.2| Developmental embryonic B CG16792-PA [Drosophila melanogaster] gi|29337191|sp|Q24297|RUX... |
| Match: gi|51468014|ref|NP_001003881.1| |
score: 128 |
e-value: 9e-29 |
Identity: 77.03% |
Span: 222bp (51.6%) |
Frame: 1 |
| small |
| Match: gi|94372795|ref|XP_357414.2| |
score: 128 |
e-value: 9e-29 |
Identity: 74.03% |
Span: 231bp (53.7%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|42415804|gb|AAS15770.1| |
score: 128 |
e-value: 9e-29 |
Identity: 79.45% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|42415804|gb|AAS15770.1| DebB [Drosophila simulans] |
| Match: gi|74189295|dbj|BAE22683.1| |
score: 128 |
e-value: 1e-28 |
Identity: 77.03% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|74189295|dbj|BAE22683.1| unnamed protein product [Mus musculus] |
| Match: gi|47218337|emb|CAG04169.1| |
score: 128 |
e-value: 9e-29 |
Identity: 75% |
Span: 228bp (53.0%) |
Frame: 1 |
| gi|47218337|emb|CAG04169.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|115657913|ref|XP_796806.2| |
score: 127 |
e-value: 2e-28 |
Identity: 78.08% |
Span: 219bp (50.9%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|31212897|ref|XP_312266.1| |
score: 126 |
e-value: 4e-28 |
Identity: 75.34% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|31212897|ref|XP_312266.1| ENSANGP00000002801 [Anopheles gambiae] gi|30177439|gb|EAA07677.2| ENSANGP00000002801 [An... |
| Match: gi|91083615|ref|XP_969779.1| |
score: 124 |
e-value: 2e-27 |
Identity: 77.78% |
Span: 216bp (50.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|39589637|emb|CAE66872.1| |
score: 123 |
e-value: 3e-27 |
Identity: 79.73% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|39589637|emb|CAE66872.1| Hypothetical protein CBG12250 [Caenorhabditis briggsae] |
| Match: gi|95102986|gb|ABF51434.1| |
score: 120 |
e-value: 3e-26 |
Identity: 72.97% |
Span: 222bp (51.6%) |
Frame: 1 |
| small |
| Match: gi|17557029|ref|NP_498708.1| |
score: 120 |
e-value: 3e-26 |
Identity: 77.33% |
Span: 225bp (52.3%) |
Frame: 1 |
| gi|17557029|ref|NP_498708.1| small nuclear ribonucleoprotein, small nuclear ribonucleoprotein SNR-5 (9.2 kD) (snr-5) ... |
| Match: gi|116059834|emb|CAL55541.1| |
score: 115 |
e-value: 1e-24 |
Identity: 63.95% |
Span: 258bp (60.0%) |
Frame: 1 |
| Ypt/Rab |
| Match: gi|116501682|gb|EAU84577.1| |
score: 110 |
e-value: 2e-23 |
Identity: 69.86% |
Span: 219bp (50.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|19112893|ref|NP_596101.1| |
score: 110 |
e-value: 2e-23 |
Identity: 71.23% |
Span: 219bp (50.9%) |
Frame: 1 |
| gi|19112893|ref|NP_596101.1| small nuclear ribonucleoprotein F [Schizosaccharomyces pombe] gi|6094210|sp|O59734|RUXF_... |
| Match: gi|145350487|ref|XP_001419636.1| |
score: 110 |
e-value: 3e-23 |
Identity: 66.67% |
Span: 216bp (50.2%) |
Frame: 1 |
| predicted |
| Match: gi|27704896|ref|XP_230870.1| |
score: 109 |
e-value: 6e-23 |
Identity: 67.61% |
Span: 213bp (49.5%) |
Frame: 1 |
| gi|27704896|ref|XP_230870.1| similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF) [Ratt... |
| Match: gi|82954029|ref|XP_895391.1| |
score: 106 |
e-value: 5e-22 |
Identity: 67.57% |
Span: 222bp (51.6%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|58266046|ref|XP_570179.1| |
score: 106 |
e-value: 4e-22 |
Identity: 68.49% |
Span: 219bp (50.9%) |
Frame: 1 |
| mRNA |
| Match: gi|60691036|gb|AAX30542.1| |
score: 106 |
e-value: 5e-22 |
Identity: 72.06% |
Span: 204bp (47.4%) |
Frame: 1 |
| gi|60691036|gb|AAX30542.1| SJCHGC04779 protein [Schistosoma japonicum] |
| Match: gi|116204791|ref|XP_001228206.1| |
score: 100 |
e-value: 3e-20 |
Identity: 63.51% |
Span: 219bp (50.9%) |
Frame: 1 |
| conserved |
| Match: gi|119617955|gb|EAW97549.1| |
score: 99.4 |
e-value: 6e-20 |
Identity: 80.36% |
Span: 168bp (39.1%) |
Frame: 1 |
| small |
| Match: gi|119191758|ref|XP_001246485.1| |
score: 99.4 |
e-value: 6e-20 |
Identity: 63.51% |
Span: 219bp (50.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|39943768|ref|XP_361421.1| |
score: 97.8 |
e-value: 2e-19 |
Identity: 61.33% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|39943768|ref|XP_361421.1| hypothetical protein MG03895.4 [Magnaporthe grisea 70-15] |
| Match: gi|71032523|ref|XP_765903.1| |
score: 96.3 |
e-value: 5e-19 |
Identity: 66.2% |
Span: 210bp (48.8%) |
Frame: 1 |
| small |
| Match: gi|84999278|ref|XP_954360.1| |
score: 96.3 |
e-value: 5e-19 |
Identity: 66.2% |
Span: 210bp (48.8%) |
Frame: 1 |
| small |
| Match: gi|125577944|gb|EAZ19166.1| |
score: 95.5 |
e-value: 8e-19 |
Identity: 72.73% |
Span: 198bp (46.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|46108998|ref|XP_381557.1| |
score: 95.5 |
e-value: 8e-19 |
Identity: 58.67% |
Span: 222bp (51.6%) |
Frame: 1 |
| gi|46108998|ref|XP_381557.1| hypothetical protein FG01381.1 [Gibberella zeae PH-1] >gi|42546114|gb|EAA68957.1| hypoth... |
| Match: gi|125535174|gb|EAY81722.1| |
score: 95.5 |
e-value: 8e-19 |
Identity: 72.73% |
Span: 198bp (46.0%) |
Frame: 1 |
| hypothetical |
| Match: gi|66815943|ref|XP_641988.1| |
score: 94.4 |
e-value: 2e-18 |
Identity: 64.29% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|66815943|ref|XP_641988.1| hypothetical protein DDB0206218 [Dictyostelium discoideum] >gi|60470031|gb|EAL68012.1| h... |
| Match: gi|85080344|ref|XP_956525.1| |
score: 93.2 |
e-value: 4e-18 |
Identity: 60% |
Span: 222bp (51.6%) |
Frame: 1 |
| hypothetical |
| Match: gi|118345766|ref|XP_976713.1| |
score: 93.2 |
e-value: 4e-18 |
Identity: 57.83% |
Span: 213bp (49.5%) |
Frame: 1 |
| Sm |
| Match: gi|145328286|ref|NP_001077889.1| |
score: 92.8 |
e-value: 5e-18 |
Identity: 86% |
Span: 150bp (34.9%) |
Frame: 1 |
| unknown |
| Match: gi|50543240|ref|XP_499786.1| |
score: 91.7 |
e-value: 1e-17 |
Identity: 64.29% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50543240|ref|XP_499786.1| hypothetical protein [Yarrowia lipolytica] >gi|49645651|emb|CAG83711.1| unnamed protein ... |
| Match: gi|145517276|ref|XP_001444521.1| |
score: 90.9 |
e-value: 2e-17 |
Identity: 54.17% |
Span: 216bp (50.2%) |
Frame: 1 |
| hypothetical |
| Match: gi|67476154|ref|XP_653680.1| |
score: 89.4 |
e-value: 6e-17 |
Identity: 64.06% |
Span: 192bp (44.7%) |
Frame: 1 |
| gi|67476154|ref|XP_653680.1| small nuclear ribonucleoprotein F, putative [Entamoeba histolytica HM-1:IMSS] >gi|564706... |
| Match: gi|124804265|ref|XP_001347951.1| |
score: 88.2 |
e-value: 1e-16 |
Identity: 58.21% |
Span: 201bp (46.7%) |
Frame: 1 |
| small |
| Match: gi|27574143|pdb|1N9R|A |
score: 87.4 |
e-value: 2e-16 |
Identity: 59.49% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|27574143|pdb|1N9R|A Chain A, Crystal Structure Of A Heptameric Ring Complex Of Yeast Smf In Spacegroup P4122 gi|27... |
| Match: gi|6325440|ref|NP_015508.1| |
score: 87.4 |
e-value: 2e-16 |
Identity: 59.49% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|6325440|ref|NP_015508.1| Sm or Sm-like snRNP protein; Smx3p [Saccharomyces cerevisiae] gi|1711405|sp|P54999|RUXF_Y... |
| Match: gi|50288725|ref|XP_446792.1| |
score: 86.7 |
e-value: 4e-16 |
Identity: 55.71% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50288725|ref|XP_446792.1| unnamed protein product [Candida glabrata] >gi|49526100|emb|CAG59719.1| unnamed protein ... |
| Match: gi|121716524|ref|XP_001275833.1| |
score: 86.7 |
e-value: 4e-16 |
Identity: 54.05% |
Span: 219bp (50.9%) |
Frame: 1 |
| LSM |
| Match: gi|129558586|gb|EAL93847.2| |
score: 86.7 |
e-value: 4e-16 |
Identity: 54.05% |
Span: 219bp (50.9%) |
Frame: 1 |
| small |
| Match: gi|145251167|ref|XP_001397097.1| |
score: 86.3 |
e-value: 5e-16 |
Identity: 54.05% |
Span: 219bp (50.9%) |
Frame: 1 |
| hypothetical |
| Match: gi|68068315|ref|XP_676067.1| |
score: 85.1 |
e-value: 1e-15 |
Identity: 61.29% |
Span: 186bp (43.3%) |
Frame: 1 |
| small |
| Match: gi|94389598|ref|XP_980896.1| |
score: 84 |
e-value: 3e-15 |
Identity: 77.55% |
Span: 147bp (34.2%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|27574150|pdb|1N9S|A |
score: 83.6 |
e-value: 3e-15 |
Identity: 58.23% |
Span: 234bp (54.4%) |
Frame: 1 |
| gi|27574150|pdb|1N9S|A Chain A, Crystal Structure Of Yeast Smf In Spacegroup P43212 gi|27574151|pdb|1N9S|B Chain B, C... |
| Match: gi|50308333|ref|XP_454168.1| |
score: 80.5 |
e-value: 3e-14 |
Identity: 57.14% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|50308333|ref|XP_454168.1| unnamed protein product [Kluyveromyces lactis] >gi|49643303|emb|CAG99255.1| unnamed prot... |
| Match: gi|50422347|ref|XP_459736.1| |
score: 77.8 |
e-value: 2e-13 |
Identity: 55.41% |
Span: 210bp (48.8%) |
Frame: 1 |
| hypothetical |
| Match: gi|126137233|ref|XP_001385140.1| |
score: 76.6 |
e-value: 4e-13 |
Identity: 54.05% |
Span: 210bp (48.8%) |
Frame: 1 |
| predicted |
| Match: gi|67901238|ref|XP_680875.1| |
score: 73.9 |
e-value: 3e-12 |
Identity: 55.56% |
Span: 186bp (43.3%) |
Frame: 1 |
| gi|67901238|ref|XP_680875.1| hypothetical protein AN7606.2 [Aspergillus nidulans FGSC A4] >gi|40742996|gb|EAA62186.1|... |
| Match: gi|11602707|emb|CAC18540.1| |
score: 71.2 |
e-value: 2e-11 |
Identity: 50% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|11602707|emb|CAC18540.1| putative U6-snRNA-associated protein [Echinococcus multilocularis] |
| Match: gi|119481967|ref|XP_001261012.1| |
score: 70.9 |
e-value: 2e-11 |
Identity: 55.17% |
Span: 171bp (39.8%) |
Frame: 1 |
| LSM |
| Match: gi|13812032|ref|NP_113163.1| |
score: 70.5 |
e-value: 3e-11 |
Identity: 50% |
Span: 204bp (47.4%) |
Frame: 1 |
| gi|13812032|ref|NP_113163.1| small nuclear ribonucleoprotein F [Guillardia theta] gi|25329696|pir||C90130 small nucle... |
| Match: gi|119887577|ref|XP_001252392.1| |
score: 70.1 |
e-value: 4e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|60687576|gb|AAX30121.1| |
score: 70.1 |
e-value: 4e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|60687576|gb|AAX30121.1| putative U6-snRNA-associated protein [Schistosoma japonicum] |
| Match: gi|73978282|ref|XP_855162.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Canis familiaris] |
| Match: gi|17510579|ref|NP_490883.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 49.25% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|17510579|ref|NP_490883.1| u6 snRNA-associated Sm-like protein (lsm-5) [Caenorhabditis elegans] gi|14916400|gb|AAK7... |
| Match: gi|5901998|ref|NP_009011.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein LSm6 [Homo sapiens] >gi113865835|ref|NP_084421.1| U6 snRNA-associated Sm-like pro... |
| Match: gi|115446301|ref|NP_001046930.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| Os02g0510100 [Oryza sativa (japonica cultivar-group)] >gi113536461|dbj|BAF08844.1| Os02g0510100 [Oryza sativa Japonic... |
| Match: gi|39589389|emb|CAE74418.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 49.25% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|39589389|emb|CAE74418.1| Hypothetical protein CBG22150 [Caenorhabditis briggsae] |
| Match: gi|48716974|dbj|BAD23667.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| putative Sm protein F [Oryza sativa Japonica Group] >gi215765012|dbj|BAG86709.1| unnamed protein product [Oryza sativ... |
| Match: gi|115458068|ref|NP_001052634.1| |
score: 69.7 |
e-value: 5e-11 |
Identity: 46.97% |
Span: 198bp (46.0%) |
Frame: 1 |
| Os04g0388900 [Oryza sativa (japonica cultivar-group)] >gi113564205|dbj|BAF14548.1| Os04g0388900 [Oryza sativa Japonic... |
| Match: gi|123474198|ref|XP_001320283.1| |
score: 69.3 |
e-value: 6e-11 |
Identity: 42.25% |
Span: 210bp (48.8%) |
Frame: 1 |
| Sm |
| Match: gi|15232179|ref|NP_191540.1| |
score: 68.9 |
e-value: 8e-11 |
Identity: 46.38% |
Span: 207bp (48.1%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|15224366|ref|NP_181909.1| |
score: 68.9 |
e-value: 8e-11 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative ... |
| Match: gi|21554327|gb|AAM63434.1| |
score: 68.9 |
e-value: 8e-11 |
Identity: 46.38% |
Span: 207bp (48.1%) |
Frame: 1 |
| U6 snRNA-associated Sm-like protein [Arabidopsis thaliana] |
| Match: gi|71649985|ref|XP_813700.1| |
score: 68.6 |
e-value: 1e-10 |
Identity: 54.29% |
Span: 210bp (48.8%) |
Frame: 1 |
| small |
| Match: gi|72032500|ref|XP_799246.1| |
score: 68.6 |
e-value: 1e-10 |
Identity: 48.48% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|72032500|ref|XP_799246.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm6 [Strongylocentrotus purpu... |
| Match: gi|58387098|ref|XP_315329.2| |
score: 68.2 |
e-value: 1e-10 |
Identity: 49.21% |
Span: 189bp (44.0%) |
Frame: 1 |
| ENSANGP00000021121 |
| Match: gi|47217355|emb|CAG11060.1| |
score: 68.2 |
e-value: 1e-10 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| gi|47217355|emb|CAG11060.1| unnamed protein product [Tetraodon nigroviridis] |
| Match: gi|45190332|ref|NP_984586.1| |
score: 68.2 |
e-value: 1e-10 |
Identity: 48.57% |
Span: 207bp (48.1%) |
Frame: 1 |
| gi|45190332|ref|NP_984586.1| AEL274Cp [Eremothecium gossypii] >gi|44983228|gb|AAS52410.1| AEL274Cp [Eremothecium goss... |
| Match: gi|50344808|ref|NP_001002077.1| |
score: 67.8 |
e-value: 2e-10 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| Sm protein F [Danio rerio] >gi48735113|gb|AAH72549.1| LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) [... |
| Match: gi|71002408|ref|XP_755885.1| |
score: 67.8 |
e-value: 2e-10 |
Identity: 48% |
Span: 198bp (46.0%) |
Frame: 1 |
| small |
| Match: gi|19115292|ref|NP_594380.1| |
score: 67.4 |
e-value: 2e-10 |
Identity: 46.27% |
Span: 201bp (46.7%) |
Frame: 1 |
| gi|19115292|ref|NP_594380.1| small nuclear ribonucleoprotein, F-like [Schizosaccharomyces pombe] gi|10720076|sp|Q9UUI... |
| Match: gi|24656550|ref|NP_611528.1| |
score: 66.6 |
e-value: 4e-10 |
Identity: 49.21% |
Span: 189bp (44.0%) |
Frame: 1 |
| gi|24656550|ref|NP_611528.1| CG9344-PA [Drosophila melanogaster] gi|7291213|gb|AAF46645.1| CG9344-PA [Drosophila mela... |
| Match: gi|72549482|ref|XP_843552.1| |
score: 66.2 |
e-value: 5e-10 |
Identity: 52.24% |
Span: 201bp (46.7%) |
Frame: 1 |
| Leishmania |
| Match: gi|146101999|ref|XP_001469255.1| |
score: 66.2 |
e-value: 5e-10 |
Identity: 52.24% |
Span: 201bp (46.7%) |
Frame: 1 |
| sm-f |
| Match: gi|67624411|ref|XP_668488.1| |
score: 65.9 |
e-value: 7e-10 |
Identity: 43.66% |
Span: 213bp (49.5%) |
Frame: 1 |
| gi|67624411|ref|XP_668488.1| Sm protein F [Cryptosporidium hominis] >gi|54659686|gb|EAL38252.1| Sm protein F [Cryptos... |
| Match: gi|66362830|ref|XP_628381.1| |
score: 65.9 |
e-value: 7e-10 |
Identity: 43.66% |
Span: 213bp (49.5%) |
Frame: 1 |
| small |
| Match: gi|110749924|ref|XP_001121733.1| |
score: 65.9 |
e-value: 7e-10 |
Identity: 47.62% |
Span: 189bp (44.0%) |
Frame: 1 |
| PREDICTED: |
| Match: gi|119184466|ref|XP_001243137.1| |
score: 65.5 |
e-value: 9e-10 |
Identity: 44.78% |
Span: 201bp (46.7%) |
Frame: 1 |
| hypothetical |
|
| 33 lower scoring hits censored -- only 100 best hits are stored. |
| arabidopsis/peptide [blastx] | Showing best 3 hits recorded |
| Match: At4G30220.1 |
score: 142 |
e-value: 4e-35 |
Identity: 85.71% |
Span: 231bp (53.7%) |
Frame: 1 |
| Symbols: RUXF | small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative | chr4:1480... |
| Match: At3G59810.1 |
score: 68.9 |
e-value: 8e-13 |
Identity: 46.38% |
Span: 207bp (48.1%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
| Match: At2G43810.1 |
score: 68.9 |
e-value: 8e-13 |
Identity: 45.45% |
Span: 198bp (46.0%) |
Frame: 1 |
| small nuclear ribonucleoprotein F, putative / U6 snRNA-associated Sm-like protein, putative / Sm protein F, putative... |
|
