| genbank/nr [blastx] | Showing best 46 hits recorded |
| Match: gi|1052956|gb|AAC50019.1| |
score: 78.57 |
e-value: 2.3e-14 |
Identity: 63.93% |
Span: 183bp (42.6%) |
Frame: 2 |
| high mobility group protein 2 HMG2 [Ipomoea nil] |
| Match: gi|7446213|pir||T02252 |
score: 74.71 |
e-value: 3.4e-13 |
Identity: 56.52% |
Span: 207bp (48.1%) |
Frame: 2 |
| gi|7446213|pir||T02252 high mobility group protein HMG-1 - common tobacco gi|2196548|gb|AAB61215.1| DNA-binding prote... |
| Match: gi|7446228|pir||T03375 |
score: 74.33 |
e-value: 4.4e-13 |
Identity: 45.26% |
Span: 285bp (66.3%) |
Frame: 2 |
| gi|7446228|pir||T03375 high mobility group protein HMGd1 - maize gi|2196672|emb|CAA70045.1| HMGd1 [Zea mays] gi|22135... |
| Match: gi|7446212|pir||T07377 |
score: 74.33 |
e-value: 4.4e-13 |
Identity: 56.52% |
Span: 207bp (48.1%) |
Frame: 2 |
| gi|7446212|pir||T07377 high mobility group protein - potato gi|2894109|emb|CAA05365.1| high mobility group protein [S... |
| Match: gi|17017392|gb|AAL33650.1| |
score: 73.17 |
e-value: 9.8e-13 |
Identity: 44.21% |
Span: 285bp (66.3%) |
Frame: 2 |
| gi|17017392|gb|AAL33650.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|729736|sp|P40619|HMGL_PHANI |
score: 72.79 |
e-value: 1.3e-12 |
Identity: 59.02% |
Span: 183bp (42.6%) |
Frame: 2 |
| gi|729736|sp|P40619|HMGL_PHANI HMG1/2-like protein gi|1085860|pir||S40302 high mobility group protein HMG-1 - Pharbit... |
| Match: gi|18394900|ref|NP_564124.1| |
score: 69.71 |
e-value: 1.1e-11 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|25402921|pir||F86339 |
score: 69.71 |
e-value: 1.1e-11 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| gi|25402921|pir||F86339 protein F2D10.18 [imported] - Arabidopsis thaliana gi|8886929|gb|AAF80615.1| F2D10.18 [Arabid... |
| Match: gi|25402921|pir||F86339 |
score: 68.94 |
e-value: 1.8e-11 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| gi|25402921|pir||F86339 protein F2D10.18 [imported] - Arabidopsis thaliana gi|8886929|gb|AAF80615.1| F2D10.18 [Arabid... |
| Match: gi|18394898|ref|NP_564123.1| |
score: 68.94 |
e-value: 1.8e-11 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|541968|pir||S40122 |
score: 66.63 |
e-value: 9.1e-11 |
Identity: 73.17% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|541968|pir||S40122 high mobility group protein HMG-1 - garden pea gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum s... |
| Match: gi|123379|sp|P26585|HMGL_SOYBN |
score: 65.47 |
e-value: 2e-10 |
Identity: 70.73% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|123379|sp|P26585|HMGL_SOYBN HMG1/2-like protein (SB11 protein) gi|99914|pir||S22309 high mobility group protein HM... |
| Match: gi|7446231|pir||T09581 |
score: 65.47 |
e-value: 2e-10 |
Identity: 52.54% |
Span: 177bp (41.2%) |
Frame: 2 |
| gi|7446231|pir||T09581 probable high mobility group protein HMG1 - sword bean gi|1813329|dbj|BAA19156.1| HMG-1 [Canav... |
| Match: gi|15231065|ref|NP_190756.1| |
score: 64.31 |
e-value: 4.5e-10 |
Identity: 45.78% |
Span: 249bp (57.9%) |
Frame: 2 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|42572635|ref|NP_974413.1| |
score: 64.31 |
e-value: 4.5e-10 |
Identity: 45.78% |
Span: 249bp (57.9%) |
Frame: 2 |
| HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcriptio... |
| Match: gi|3885888|gb|AAC78104.1| |
score: 63.93 |
e-value: 5.9e-10 |
Identity: 40.7% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|3885888|gb|AAC78104.1| high mobility group protein [Oryza sativa] gi|23345287|gb|AAN28722.1| HMG1 protein [Oryza s... |
| Match: gi|7446229|pir||T03640 |
score: 59.31 |
e-value: 1.5e-08 |
Identity: 37.21% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|7446229|pir||T03640 high mobility group protein MNB1b - maize (fragment) gi|397396|emb|CAA46876.1| DNA-binding pro... |
| Match: gi|123378|sp|P27347|MNBB_MAIZE |
score: 59.31 |
e-value: 1.5e-08 |
Identity: 37.21% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|123378|sp|P27347|MNBB_MAIZE DNA-binding protein MNB1B (HMG1-like protein) gi|539062|pir||B47150 high mobility grou... |
| Match: gi|729738|sp|P40621|HMGL_WHEAT |
score: 58.15 |
e-value: 3.2e-08 |
Identity: 36.05% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|729738|sp|P40621|HMGL_WHEAT HMG1/2-like protein gi|100791|pir||S18991 high mobility group protein - wheat gi|21803... |
| Match: gi|950053|emb|CAA90679.1| |
score: 55.45 |
e-value: 2.1e-07 |
Identity: 33.72% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|950053|emb|CAA90679.1| HMG1/2-like protein [Hordeum vulgare subsp. vulgare] |
| Match: gi|11346367|pir||T51596 |
score: 53.91 |
e-value: 6.1e-07 |
Identity: 44.83% |
Span: 174bp (40.5%) |
Frame: 2 |
| gi|11346367|pir||T51596 high mobility group protein HMG-gamma [validated] - Arabidopsis thaliana gi|2832355|emb|CAA74... |
| Match: gi|21592453|gb|AAM64404.1| |
score: 53.91 |
e-value: 6.1e-07 |
Identity: 44.83% |
Span: 174bp (40.5%) |
Frame: 2 |
| gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|15227862|ref|NP_179347.1| |
score: 53.53 |
e-value: 8e-07 |
Identity: 44.83% |
Span: 174bp (40.5%) |
Frame: 2 |
| gi|15227862|ref|NP_179347.1| HMG protein -related [Arabidopsis thaliana] gi|25385737|pir||F84553 probable HMG protein... |
| Match: gi|18419623|gb|AAL69379.1| |
score: 51.22 |
e-value: 4e-06 |
Identity: 54.17% |
Span: 144bp (33.5%) |
Frame: 2 |
| gi|18419623|gb|AAL69379.1| HMG-domain containing protein [Narcissus pseudonarcissus] |
| Match: gi|13877775|gb|AAK43965.1| |
score: 50.45 |
e-value: 6.8e-06 |
Identity: 43.1% |
Span: 174bp (40.5%) |
Frame: 2 |
| gi|13877775|gb|AAK43965.1| putative HMG protein [Arabidopsis thaliana] |
| Match: gi|729737|sp|P40620|HMGL_VICFA |
score: 49.68 |
e-value: 1.2e-05 |
Identity: 38.98% |
Span: 177bp (41.2%) |
Frame: 2 |
| gi|729737|sp|P40620|HMGL_VICFA HMG1/2-like protein gi|541981|pir||S39556 high mobility group protein HMG - fava bean |
| Match: gi|18700443|dbj|BAB85204.1| |
score: 47.37 |
e-value: 5.7e-05 |
Identity: 43.9% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|18700443|dbj|BAB85204.1| high mobility group box protein 2 [Oryza sativa (japonica cultivar-group)] |
| Match: gi|17017394|gb|AAL33651.1| |
score: 45.44 |
e-value: 0.00022 |
Identity: 41.46% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|17017394|gb|AAL33651.1| HMG-like nucleosome/chromatin assembly factor D [Zea mays] |
| Match: gi|7446226|pir||T03372 |
score: 45.44 |
e-value: 0.00022 |
Identity: 41.46% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|7446226|pir||T03372 high mobility group protein HMGc1 - maize gi|1845195|emb|CAA69605.1| HMGc1 [Zea mays] gi|54415... |
| Match: gi|15237040|ref|NP_195282.1| |
score: 45.05 |
e-value: 0.00028 |
Identity: 41.46% |
Span: 123bp (28.6%) |
Frame: 2 |
| gi|15237040|ref|NP_195282.1| HMG delta protein [Arabidopsis thaliana] gi|7446230|pir||T04662 high mobility group prot... |
| Match: gi|4468042|emb|CAB37859.1| |
score: 44.67 |
e-value: 0.00037 |
Identity: 37.5% |
Span: 168bp (39.1%) |
Frame: 2 |
| gi|4468042|emb|CAB37859.1| unnamed protein product [Vicia faba] |
| Match: gi|45187563|ref|NP_983786.1| |
score: 44.28 |
e-value: 0.00049 |
Identity: 34.88% |
Span: 258bp (60.0%) |
Frame: 2 |
| gi|45187563|ref|NP_983786.1| ADL310Wp [Eremothecium gossypii] >gi|44982301|gb|AAS51610.1| ADL310Wp [Eremothecium goss... |
| Match: gi|7488917|pir||T14286 |
score: 41.97 |
e-value: 0.002 |
Identity: 42.5% |
Span: 120bp (27.9%) |
Frame: 2 |
| gi|7488917|pir||T14286 embryogenic callus protein 98b - carrot gi|3551257|dbj|BAA32827.1| 98b [Daucus carota] |
| Match: gi|17017396|gb|AAL33652.1| |
score: 41.59 |
e-value: 0.003 |
Identity: 40% |
Span: 150bp (34.9%) |
Frame: 2 |
| gi|17017396|gb|AAL33652.1| HMG type nucleosome/chromatin assembly factor D [Zea mays] gi|22135475|gb|AAM93218.1| nucl... |
| Match: gi|7446227|pir||T03374 |
score: 41.2 |
e-value: 0.004 |
Identity: 48.39% |
Span: 93bp (21.6%) |
Frame: 2 |
| gi|7446227|pir||T03374 high mobility group protein HMGc2 - maize gi|1845197|emb|CAA69606.1| HMGc2 [Zea mays] |
| Match: gi|18420676|ref|NP_568431.1| |
score: 41.2 |
e-value: 0.004 |
Identity: 48.57% |
Span: 105bp (24.4%) |
Frame: 2 |
| gi|18420676|ref|NP_568431.1| expressed protein [Arabidopsis thaliana] gi|21554154|gb|AAM63233.1| unknown [Arabidopsis... |
| Match: gi|9759080|dbj|BAB09558.1| |
score: 41.2 |
e-value: 0.004 |
Identity: 48.57% |
Span: 105bp (24.4%) |
Frame: 2 |
| gi|9759080|dbj|BAB09558.1| gene_id:K19M13.4~unknown protein [Arabidopsis thaliana] |
| Match: gi|729742|sp|P40625|HMG_TETPY |
score: 40.43 |
e-value: 0.007 |
Identity: 48.57% |
Span: 105bp (24.4%) |
Frame: 2 |
| gi|729742|sp|P40625|HMG_TETPY High-mobility-group protein (Nonhistone chromosomal protein) gi|84332|pir||JU0038 nonhi... |
| Match: gi|4885421|ref|NP_005333.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 50% |
Span: 108bp (25.1%) |
Frame: 2 |
| gi|4885421|ref|NP_005333.1| high-mobility group box 3; high-mobility group (nonhistone chromosomal) protein 4 [Homo s... |
| Match: gi|47124341|gb|AAH70482.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 50% |
Span: 108bp (25.1%) |
Frame: 2 |
| gi|47124341|gb|AAH70482.1| Unknown (protein for MGC:90319) [Homo sapiens] |
| Match: gi|1085210|pir||S48708 |
score: 40.05 |
e-value: 0.009 |
Identity: 50% |
Span: 108bp (25.1%) |
Frame: 2 |
| gi|1085210|pir||S48708 high-mobility-group-1 protein - trout |
| Match: gi|609551|gb|AAA58771.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 50% |
Span: 108bp (25.1%) |
Frame: 2 |
| gi|609551|gb|AAA58771.1| HMG-1 |
| Match: gi|6325309|ref|NP_015377.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 32.93% |
Span: 246bp (57.2%) |
Frame: 2 |
| gi|6325309|ref|NP_015377.1| Homologous to mammalian high mobility group proteins 1 and 2; functions redundantly with ... |
| Match: gi|6435676|pdb|1CG7|A |
score: 40.05 |
e-value: 0.009 |
Identity: 32.93% |
Span: 246bp (57.2%) |
Frame: 2 |
| gi|6435676|pdb|1CG7|A Chain A, Hmg Protein Nhp6a From Saccharomyces Cerevisiae |
| Match: gi|47497872|dbj|BAD20056.1| |
score: 40.05 |
e-value: 0.009 |
Identity: 35.42% |
Span: 135bp (31.4%) |
Frame: 2 |
| putative embryogenic callus protein 98b [Oryza sativa Japonica Group] >gi50252043|dbj|BAD27975.1| putative embryogeni... |
| Match: gi|85591|pir||A24019 |
score: 40.05 |
e-value: 0.009 |
Identity: 50% |
Span: 108bp (25.1%) |
Frame: 2 |
| gi|85591|pir||A24019 nonhistone chromosomal protein HMG-T - trout (fragment) |
|
| arabidopsis/peptide [blastx] | Showing best 10 hits recorded |
| Match: At1g20696.1 |
score: 69.71 |
e-value: 6.4e-13 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| At1g20696.1 68408.m02339 expressed protein |
| Match: At1g20693.1 |
score: 68.94 |
e-value: 1.1e-12 |
Identity: 54.24% |
Span: 177bp (41.2%) |
Frame: 2 |
| At1g20693.1 68408.m02338 expressed protein |
| Match: At3g51880.2 |
score: 64.31 |
e-value: 2.7e-11 |
Identity: 45.78% |
Span: 249bp (57.9%) |
Frame: 2 |
| At3g51880.2 68416.m05690 high mobility group protein alpha (HMGalpha) / HMG protein alpha nearly identical to HMG pro... |
| Match: At3g51880.1 |
score: 64.31 |
e-value: 2.7e-11 |
Identity: 45.78% |
Span: 249bp (57.9%) |
Frame: 2 |
| At3g51880.1 68410.m05273 high mobility group protein 2-related |
| Match: At2g17560.1 |
score: 53.53 |
e-value: 4.7e-08 |
Identity: 44.83% |
Span: 174bp (40.5%) |
Frame: 2 |
| At2g17560.1 68409.m01829 HMG protein -related |
| Match: At4g35570.1 |
score: 45.05 |
e-value: 1.7e-05 |
Identity: 41.46% |
Span: 123bp (28.6%) |
Frame: 2 |
| At4g35570.1 68411.m04592 HMG delta protein |
| Match: At5g23420.1 |
score: 41.2 |
e-value: 0.00024 |
Identity: 48.57% |
Span: 105bp (24.4%) |
Frame: 2 |
| At5g23420.1 68412.m02518 expressed protein |
| Match: At4g23800.1 |
score: 39.66 |
e-value: 0.0007 |
Identity: 44.74% |
Span: 114bp (26.5%) |
Frame: 2 |
| At4g23800.1 68411.m03122 98b like protein 98b - Daucus carota (carrot),PID:d1033793 |
| Match: At4g11080.1 |
score: 38.12 |
e-value: 0.002 |
Identity: 42.11% |
Span: 114bp (26.5%) |
Frame: 2 |
| At4g11080.1 68411.m01627 98b like protein 98b - Daucus carota (carrot), PID:d1033793 |
| Match: At4g23800.1 |
score: 37.74 |
e-value: 0.003 |
Identity: 47.22% |
Span: 108bp (25.1%) |
Frame: 2 |
| At4g23800.1 68411.m03122 98b like protein 98b - Daucus carota (carrot),PID:d1033793 |
|
